>input_sequence_57113
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---------------------------------------------------A---TGGGGCCCAATCAATATGCGTGTCC
CGTAGCTCCGCCAGCCTTCTATTTATGCTCTCTCCCATGGACGGAGAGAGGCATCCAGAAGCAGAAGCA-AAGCTCACAC
AAAGTCACAAGAATGATGAACCCAAAGAGCCGTGTCCAAGAGTGGGTGGCCGACCACATCGAGCTCATCCCGGGGATGCC
CGACGACGTCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGGGTCCTACCGCTCGATGCGCCGCGTGTGCCGCGGCTGGC
GGAGCGCCGCCGCCGCCCCGGAGTTCGCCCTGGCGCGCGCCGAGGCCGGTGCCAACGAGGATCTGGTCTTTCTCATGCAG
TTTGGCAACCCGGTGGCCGG------GGACGACGGGGCGCCCGAGAACACCCCGGCGTACGGCGTGGCCGTGTACAACGT
CACCACCGGGGAGTGGCACCGCGAGAGCTCGGCGCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCG
TCGCCGTGATGGGCGGCTGGGACCCCAAGACCTTCGAGCCCGTGGCGGACGTCAACGTGCTGGACGCCGCCACCGGCGTC
TGGCGCCGCGGCGCGCCGATGCGGTCCGCGCGGTCCTTCTTCGCCTGCGCCGAGGCCGGGGGCAAGATCTATGTCGCCGG
CGGCCATGACAAGCTCAAGAACGCGCTAAAGACGGCCGAGGCGTACGACGCGGAGGCCGACGGCTGGG--------ACCC
GCTCCCGGACATGTCGGAGGAGCGCGACGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCCGTGAGCG
GGTACCGCAC-----GGGGCGTCAGGGAGGATTCGAGCGGGACGCCGAGTGGTTCGACCCGGCGACACGCGAGTGGCGCC
GCTTGGAGCGCGTGCGCGCACCGCCTTCGGCGGCTCACGTGGTGGTGCGCGGGCGGGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTGGCGCGGGGAGCGCCGTGGCTGGCTCGAGGTGGGCCCTTACCCGCCTGGTCTGAAGGCCGGCACGGCGCG
CGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGGTGGTGACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGC
TGTGGGTGTTCGACGTCAAGTCCAAGAACTGGACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTG
GCCTCCGTCCGCGTGTGA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr4D_1_TraesCS4D01G085000
AGAAGGGACAGCAGGCCTTCGGAACCCCGCCTCTCGTGATCCTGTACGAGAGAGGGGCGATCAGGTTTTTGGGGAGCGCA
CTCGCGCGACTGCTGGCAGCGACGACTTCGCCAACGACGACTTCTTCCCCGACCTAGGCAACCTCATCCTCGATGACATG
GGCGACAACACCAACGCCGGCGGTGCTGTTCCCGCTGCACCGTATGTGATTCTATCCTTCTTGTTCGAGATAGTGGTAGA
ATTCATGTTTCTAGTATGTGTCCTAGATGTGATATGTTCATCTACTATGCTAGTTCGCATGATTAGTTTAATCTCTGCTA
TTGTTGTCATGATTTATGTTCTGTTTATTTGGATTAAATCTTGTAGTAATTTGCTCATTTTCCAACACCTACTACACATA
GTGGTGCATAAAAGTTTGCCCCTCCCCC--TCCAATTTACATGCCGCCCTCAGTTTGCATATTATCCATTGAAGATTAAT
TACAGGCACAATCAATAGTTTTTCTCACTCTAAAATCAAAAGGTTATAAACAAAGAAGACTTTGATGTGTTTCG----CA
TACAGTCTTCTACTTATCTATTATAAAACTGGACACCAATGGTTTGCACTTACCGATCGACATCAACTTTGGTATTAATT
TATTCCCAATATAAAGGATCAAATTT-ACAAATCTCATCCCGGCTTCGTTGTGATAAACAC-AATGAATCATCAACTCAA
AAAAGAAAAGAAAAA-GACAACCAATCAACCAAAAAGTCACTGCCCAGGACACAAATACATTGTCCAATTATTGAAAAGG
GCATTCAGTTTTTTTTTTGCAAGATGAAAAGGGCATTCAGTTAGAGTATCACATTAAACAACACATGCATCAAGCTTCTC
CACGAAGAAGAAACAGCACACAAATCCGGCAGAAAAACAGCCGCTTGCAATTGCTTTACCATAAAGTTATTGCTTTCTCA
ACTTCAAGAAAAAAGTTATTGC--TTTTTTTATTTGCTTACCAGCTGTCACA---TGGGGCCCAATCAATATGCGTGTCC
CGTAGCTCCGCCAGCCTTCTATTTATGCTCTCTCCCATGGACGGAGAGAGGCATCCAGAAGCAGAAGCA-AAGCTCACAC
AAAGTCACAAGAATGATGAACCCAAAGAGCCGTGTCCAAGAGTGGGTGGCCGACCACATCGAGCTCATCCCGGGGATGCC
CGACGACGTCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGGGTCCTACCGCTCGATGCGCCGCGTGTGCCGCGGCTGGC
GGAGCGCCGCCGCCGCCCCGGAGTTCGCCCTGGCGCGCGCCGAGGCCGGTGCCAACGAGGATCTGGTCTTTCTCATGCAG
TTTGGCAACCCGGTGGCCGG------GGACGACGGGGCGCCCGAGAACACCCCGGCGTACGGCGTGGCCGTGTACAACGT
CACCACCGGGGAGTGGCACCGCGAGAGCTCGGCGCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCG
TCGCCGTGATGGGCGGCTGGGACCCCAAGACCTTCGAGCCCGTGGCGGACGTCAACGTGCTGGACGCCGCCACCGGCGTC
TGGCGCCGCGGCGCGCCGATGCGGTCCGCGCGGTCCTTCTTCGCCTGCGCCGAGGCCGGGGGCAAGATCTATGTCGCCGG
CGGCCATGACAAGCTCAAGAACGCGCTAAAGACGGCCGAGGCGTACGACGCGGAGGCCGACGGCTGGG--------ACCC
GCTCCCGGACATGTCGGAGGAGCGCGACGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCCGTGAGCG
GGTACCGCAC-----GGGGCGTCAGGGAGGATTCGAGCGGGACGCCGAGTGGTTCGACCCGGCGACACGCGAGTGGCGCC
GCTTGGAGCGCGTGCGCGCACCGCCTTCGGCGGCTCACGTGGTGGTGCGCGGGCGGGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTGGCGCGGGGAGCGCCGTGGCTGGCTCGAGGTGGGCCCTTACCCGCCTGGTCTGAAGGCCGGCACGGCGCG
CGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGGTGGTGACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGC
TGTGGGTGTTCGACGTCAAGTCCAAGAACTGGACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTG
GCCTCCGTCCGCGTGTGATGAGAACCCTCCCCGGCGCCGCTCCCGACCAAGAAGACTACTACTACTACTAGCGAGTATGT
ATGCATGTTCTTGAGTTGCAGTGCTTCTGCCATTGATGGAACTGAGATCCGCGATCTCATCGCCTGAGATCTGCGCATCC
CGGATGAATCATCGCCAGGAAAAAAGAAGAAAAAAAACAGGAGGCATCAATCATCGCCAAGAAGAAAACAACAAAAATAA
CTAGAGGATTGTAGCTTGTCCTGTCAGATCTGTGCGCTCTAGTCACCATGGTTGTGAACTCTCCTCCCTCCCCTCTTCTG
CTGTTGAGACAGCCTGCCATTTCTGTTGTTGAGACAGCGTGGTGTTTTGGTTCTACAGTATGATATTAGCAATGAGTCGC
TGTACATATTATTGTGAGTTGGAAGATCATATCATGTGGTTTCTCCATAGTTCTGTCCAGATCCAGTTCTGCTACTGCTG
CTCACAGAGGCTGGTACGCCATCTCAAATGTCCATCTGCTTCGCGGCTGAAGAACACACCTCTCGATGTCGATGCCGGTG
GCTCGCCGCCGTCGAGCAATCATCTTTACGTTTCTTTCCATACAATCTTCAATTTTCATACTACTATCTCGCGTCCTATT
CAATTGGTGCTCGATCGCCGCCGCC---CCGGCTGCTGAACCCGAAGAGGAGCTGACCTTGCCAGCCGATTCTTTCTATA
ATTAATATAATCGCTAGGTGAGGCCTCGCACTCCACGCAACAGCAAA-CCGGCCAGCTATGCGTCCCCATCCGTTTCTCC
TCCCACGTCGCCATCCAAGGATATGAACGAACGGAAATGAGGTCGCCACCGATTATGGCGTCCGTGCTTGGCCCACGGTT
TTGGACCGCG----------------CGGACGGCCCTCCACTGTAGCGGCTTTTATTATCGGGA-------GCAGTCCTG
ACGCCGCTAGGTTGCTGTTAGCTGCATCCATCCATCCATCTTCTTGGCATGGGCAACGTGAAATTTGCAGGGGACGCACG
GATAT
>chr4A_388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------CCTACTACATATA
GTGTGCAATAAAAGTTTGCATCACCCCCCATCCGATTTACATGCCGCCCTCAGTTTGCATATTATCCCTTGAAGATAAAT
TATGGGCACAATCAATAGGTTTTCTCACTCTAAAATCAGAAGGCTATAAACAAAGAAGACTTCGGCATGTTTCG----TA
TCGAGTCTTCTACTTATCCATTATAAAACTACACACCAATGTTTTGCACTTAGCGGTCGACATCAACTTTGGTATTAACT
CATTCTCAATATAAAGGATCAAATTTTACAGATCTCATCTCGGTTTCGTTGTGATCAATAC-A-TAAATCATCAACTCAA
AAAAGAAAAGAAAAAAGA----CAATCAATCAAAAAGTCAC-CCCCAGGACACAGATACATCCTCCAATTATTGA-----
----------------------------AAGGGCAATCAGTTAGAGTATCACTTTAAACAACACATGCATCAAGCTTCTC
CACGAAGAAGAAACCGCACACAAATCCGGCAGAAAAACAGCCGCTTGCAATTGCTTTAACATCAAGTTGTCGCC------
-----------------------TTTTTTTTATTTGCTTACCAGCTGTCACA---TAGGGGCCAATCAATGTGCGTGTCC
CGTAGCTCCGCCAGCCTTCTATTTATGCCCTCTCCCATGGACGGAGAGAGGCATCCAGAACCAGAAGCA-AAGCTCACAC
AAAGTCACAAGAATGATGAACCCAAAGAGCCGTGTCCAAGAGTGGGAGGCCGACCACGTCGAGCTCATCCCGGGGATGCC
CGACGACGTCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGGGTCCTACCGCTCGATGCGCCGCGTGTGCCGCGGCTGGC
GGAGCGCCGCCGCCGCCCCGGAGTTCGCCCTGGCGCGCGCCGAGGCCGGAGCCAACGAGGATCTGGTCTTTCTCATGCAG
TTTGGCAACCCGGTGGCCGG------GGACGACGGGGCGCCCGAGAACGCCCCGGCGTACGGCGTGGCCGTGTACAACGT
CACCACCGGGGAGTGGCACCGCGAGAGCTCCGCCCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCG
TCGCCGTGATGGGCGGCTGGGACCCCAAGACCTTCGAGCCCGTGGCGGACGTCAATGTGCTGGACGCCGCCACCGGCGTC
TGGCGCCGCGGCGCGCCGATGCGGTCCGCGCGCTCCTTCTTCGCCTGCGCCGAGGCGGGCGGCAAGATCTATGTCGCCGG
CGGGCACGACAAGCTCAAGAACGCGCTCAAGACGGCGGAGGCGTACGACGCTGAGGCCGACGGCTGGG--------ACCC
GCTGCCGGACATGTCGGAGGAGCGCGACGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTCGCCGTGAGCG
GGTACCGCAC-----GGGGCGCCAGGGAGGGTTCGAGCGGGACGCCGAGTGGTTCGATCCGGCGACCCGCGAGTGGCGCC
GCCTGGAGCGCGTGCGCGCCCCGCCGACGGCGGCTCACGTGGTGGTGCGCGGCCGCGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTGGCGCGGGGAGCGCCGGGGCTGGCTCGAGGTGGGCCCCTACCCGCCTGGTCTCAAGGCCGGCACGGCGCG
CGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGGTGGTCACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGC
TGTGGGTATTCGACGTCAAGTCCAAGAACTGGACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTG
GCCTCCGTCCGCGTGTGATGAGAACCCTCCCCGGCGCCGCTCCCGACCAAGAAGACTACTACTACTACTAGCGAGTATGT
ATGCATGTTCTTGAGTTGCAGTGCTTCTGCCATTGATGTATCTGAGATCCGCGATCTCATCGCCTGAGATCTGCGCATCC
CGGATGCAATCAAC-----AAAAAAGAACAAAAAAAGCATGAGGCATCA----TCGCCAAGAAGAAAACAACAAAAATAT
CTAGAGGATTGTAGGT-----TGTCAGATCTGTGTGCTCTAGTCACCATGGTTGTAAACTCTCT-------CCTCTTTTG
CTGTTGAGACAGTCTGCCATTTCTGTTGTTGAGACAGCGTGGTGTTTTGGTTC-----TATGATATTAGCAATGAGTCGC
TGTACATATTATTGTGAGTTGGAAGATCATGTCATATGGCTTCTCCATCTTCTGTCTTAGATCCAGTT---CTGCTGCAG
CTCACAGAGGCTGGTACGCCATCTCAAATGTCCATCCGTTTCGCGGCTGAAGAACACACCTC--GATGTCGATGCCGGTG
GCTCGGCGCCGTCGAGCAATCATCTTTACGTTTCTTTCCACACAATTTTCAGTTTTCA---TACTATCTCGCGTCCTATT
CAATTGGTGCTCG----CCGCCGCC---CCGGCCGCTGAACCCGAAGAGGAGCTGACCTTGCCAGCCGATTCTTTCTATA
ATTAATATAATCGCTAGGTGAGGCCTCTCACTCCACGCAACAGCAAA-CCGGCCGGCCATCCGTCCCA------------
----ACGTCGCCATCCAAGGATAGGAATGAGTGGAGATGAGGTCGCCACCGATTATGGCGTCCGTGCTTGGCCCACGGTT
TTGGACC----------------GCACGGACGGCCCTCCACTGTAGCGGCTTTTATTATCGGGA-------G--------
ACGCCGCTAGTTTGCTGTTAGCTGCATCCATCCATCCATCTTCTTGGCATGGGCGACGTGAAATTTGCATGGGACGCACG
GATAT
>chr4D_443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CGCCCTCAGTTTGCATATTATCCATTGAAGATAAAT
TACGGGCACAATCAATAAGTTTTCTCACTCTAAAATCAAAAGGCTATAAACAAAGAAGACTTCGATGTGTTTCGGCTGCA
TCGAGTCTTCTACTTATCAATTATAAAACTGGACACCAATGGTTTGCACTTACCGGTCGGCATCAAT-------------
------------------TCAAATTTAACAAATCTGATCCCGGTTTCGTTGTGATAAATACAA-TGAATCATCAACTCAA
AAATGAAATGAAAAA-GAGAATCAATCAAAAT----GTCACTCCCCAGAACACAAATACATTTTCCAATTATTGA-----
---------------------------A-AGGGCATTCAGTTAGAGTATCATTTTAAGCAACACATGCATCAAGCTTCTC
CACGAAGAAGAAACCGCACACAAATCCGGCAGAAAAACAGCCGCTTGCAATTGCTTTAACATCAAGTTGTTGCTTTCTCA
ACTTAAAAAA-AAAGTTATTGC--TTTTTTTATTTGCTCACCAGCTGTCACATAGTAGGGCCCAATCAATATGCGTGTCC
CGTAGCTGCGCTAGCCTTCTATTTATGCTCTCTCCCGAGGGAGCCGGCGGGCACGCGCTGTGGGTGTTCGACGTCAAGTC
CAAT--------ATGATGAACCCAAAGAGCCGTGTCCAAGAGTGGGAGGCCGACCACATCAACCTCATCCCGGGGATGCC
CGA------------CGACTGCCTGGCGCGCGTCCTGCACGGATCCTACCGCTCGATGCGCCGCGTGTGCCGCGGCTGGA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CAAGCACAAGAACGCACTGAAGACTGCGGAGGCGTACGACGCAGAGGTCGACGGCTGGGTCGCTGGGACCC
GCTCCCCGACATGTCGGAGGAGCGCGACGAGTGCGATGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCCGTGAGCG
GGT-----AC-----GGGCCGCCAGGGCGGGTTCGAGCGCGACGCCGAGTGGTTCGACCCGGCGTCCCGCGAGTGGCGCC
GCCTGGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>chr4B_457
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------ATATTATCCCTTGAAGATAAAT
TACGGGCACAATCAATAGGTTTTCTCACTCTAAAATCAAAAGGCTATAAACAAAGAAGACTTCGATGTGTTTCG----CA
TCGAGTCTTCTAC-TATCAATTATAAAACTGGACACCAATGGTTTGCACTTAGCGGTCGACATCAACTTTGGTATTAATT
CATTCTCAATATAAAGGATCAAATTTTACAGTTCTCATCCTGCTTTCGTTGTGATCAATACAA-TGAATCATCAACTCGA
AAAAGAAAAGAAAAA-GA----CAAACAATCGAAAAGTCACTCCCCAGGACACAAATACATTGTCCAATTATTGA-----
---------------------------AAAGGGCATTCAGTTAGAGTATCACATTAAACAACACATGCATCAAGCTTCTC
CACGAAGAAGAAACCGCACACAAATCCGTCAGAAAAACAGCCGCTTGCAATTGCTTTAACATAAGC-TGTTGCTTTCTCA
ACTTCAAAAAGAAAAATATTGCTTTTTTTTCATCTGTCTACCAGCTGTCACA---TAGGGCCCAATCAATATGCGTGTCC
CGTAGCTCCGCCAGGCTTCTATTTATGCTCTCTCCCATGGACGGAGAGAGGCATCCAGAACCAGAAGCAAAAGCTCACAC
AAAGTCACAAGAATGATGAACCCAAAGAGCCGTGTCCAAGAGTGGGAGGCCGAGCACATCGACCTCATCCCGGGGATGCC
CGACGACATCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGGATCCTACCGTTCGATGCGCCGCGTGTGCCGCGGCTGGA
GGAGCGCCGCCGCCGCCCCGGACTTCGCCCTGGCGCGCGCCGAGGCCGGAGCCAACGAGGATCTGGTCTTTCTCATGCAG
TTTGGCAACCCGGTTGCCGG------GGACGGTGGGGCGCCCGAGAACACCCCGGCGTACGGCGTGGCCGTGTACAACGT
CACCACCGGGGAGTGGCACCGCGAGAGCTCGGCGCCGCCGGTGCCGATGTTCGCCCAGTGCGCGGCCGTGGGCACCCGCG
TCGCGGTGATGGGCGGCTGGGACCCCAACACCTTCGAGCCCGTGGCGGACGTCAACGTCCTGGACGCCACCACCGGCGTC
TGGCGCCGCGGCGCGCCGATGCGGTCCGCGCGCTCCTTCTTCGCGTGCGCCGAGGCGGGGGGCAAGATCTATGTCGCCGG
CGGGCACGACAAGCTCAAGAACGCGCTGAAGACGGCCGAGGCGTACGACGCGGAGGCCGACGGCTGGG--------ACCC
GCTCCCGGACATGTCGGAGGAGCGCGACGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTTGCCGTGAGCG
GGTACCGCAC-----GGGGCGCCAGGGAGGGTTCGAGCGGGACGCCGAGTGGTTCGACCCGGCGACCCGCGAGTGGCGCC
GCCTGGAGCGCGTGCGCGCCCCGCCGTCGGCGGCTCACGTGGTGGTGCGCGGCCGCGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTGGCGCGGGGAGCGCCGGGGCTGGCTCGAGGTGGGCCCTTACCCGCCAGGTCTCAAGGCCGGCACGGCGCG
CGCGGTCGCCGTCGGCGGCGGCGAGCGCGTCGTGGTGACCGGCGCCATCGAGTCCGAGGGAGGCGGCGGCGGGCACGCGC
TGTGGGTGTTCGACGTGAAGTCCAAGAACTGGACCGTGGTGCGCCCTCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCCTG
GCATCCGTCCGCGTGTGATGAGAGCCTTCCCCGGCGCCGCTCCCGACCAAGAAGACCACTACTACTACTAGCGAGTATGT
ATGCATGTTCTTGAGTTGCAGTGCTTTTGCCATTGATGGATCTGAGATCCGCGATCTCATCGCCTGAGATCTGCGCTTCC
CGGAAGAATCATCGCCAGGAAAAAAGAAGAAAAAAA-CAGGAGGCATCA----TCGCCAAGAAGAAAACAACAAAAATAG
CTAGAGGATTGTAGCT-----TGTCAGATCTGTGCACTCTAGTCATCATGGTTGTGAACTTTCCTCCCTCCCCTCTTTTG
CTGTTGAGACAGCCTGCCATTTCTGTTGTTGAGACAGCGTGGTGTTTTGGTTC-----TATGATATTAGCAATGAGTCGC
TGTACATATTATTGTGAGTTGGAAGATCATATCATGTGGTTCCTCCATAGTTCTGTCCAGACCCAGTTCTGCTGCTGCAG
CTCACAAAGGCTGGTACGCCATCTCAAATGTCCATCCGTTTCGCGGCTGAAGAACACACCTCTCGATGTCGATGCCGGTG
GCTCGCCGCCGTCGAGCAATCATCTTTACGTTTCTTTCCATACAATTTTCAATTTTCATACTACTATCTAGCGTCCTATT
CAATTGGTACTCG----CCGCCGCCGCCCCGGCTGCTGAACCCGAAGAGGAGCTGACCTTGCCAGCCGATTCTTTCTA--
-------------CTAGGTGAGGCCTCGCACTCCACGCAACAGCAAAGCCGGCTAGCTATCCGTCCACATCCGTTTCTCC
TCCCACGTCGCCATCCAAGGATAGGAACGAACGGAGTTGAGGTCGCCACCGATTATGGCGTCCGTGCTTGGCCCACGGTT
TTGGACCGCTTGCCCATCTACTAGCACGCACGGCCCTCTACTGTACCGACTTTTATTATCGTGAGGGTCCTG--------
ACGCCGCTAGGTTGCTGTTAGCTGCATCCATCCATCCATCATCTTGGCATGGGCAACGTGAAATTTGCGGGGGACGCACG
GGTAT
>chr4D_1114
AAGAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------GAGGAACCAGAAGAGCCGTGTCCAGGAGTGCAAGGTCGAGCACATCGACCTCATCCCGGGGATGCC
GGACGACGTCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTCTGCCGCGGCTGGA
ACACCGCCGCCGCCGCGCCGGACTTCGCCCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGACCTGGTGTACCTGCTGCAG
TTCGGGAACCCGGCGGCCGCGGATGCGGACGGGGTCGCGCCGGAGAACGCCCAGGCGTACGGCGTGTCGGTGTACAACGT
CACCACCGGGGAGTGGCGCCGCGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCC
TCGCCGTGCTGGGCGGGTGGGACCCCAAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCGTCCACCGGCGTG
TGGCGCCGCGGCGCGCCGATGCGGTCGGCGCGGTCCTTCTTTGCCTGCGCCGAGGCGGGCGGCAAGATCTACGTCGCGGG
AGGCCACGACAAGCTCAAGAACGCGCTCAAGACGGCGGAGGCGTACGACGCCGGCGCCGACGCCTGGG--------ACCC
GCTCCCGGACATGTCGGAGGAGCGCGACGAGTGCGATGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCCGTGAGCG
GGT-----ACCGCACGGGCCGCCAGGGCGGCTTCGAGCGCGACGCCGAGTGGTTCGACCCGGCGTCCCGCGAGTGGCGCC
GCCTGGAGCGCGTGCGCGCGCCGCCGTCCGCGGCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTACCGCGGGGAGCGGCGCAGCTGGCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACGGCGCG
CGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGGTGGTGACCGGCGCCATCGAGTCCGAGGGAGGGGGCACCGGGCACGCGC
TGTGGGTGTTCGACGTCAAGTCCAAGAACTGGACCGTGGTGCGCCCGCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCATT
GGATCCGTGCGCGTGTGATG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----
>chr4B_1114
AAGAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GAGGAACCAGAAGAGCCGTGTTCAGGAGTGCAAGGTCGAGCACATCGACCTCATCCCGGGCATGCC
GGACGACGTCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTGTGCCGCGGCTGGA
ACAGCGCCGCCACCGCGCCGGACTTCGCGCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGATCTCGTCTACCTGCTGCAG
TTCGGGAACCCGGCGGCCGCGGACGCGGACGGGGTCGCGCCGGAGAACGCCCAGGCGTACGGGGTGTCGGTGTACAACGT
CACCACCGGGGAGTGGCGCCGCGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCC
TCGCCGTGCTGGGCGGGTGGGACCCCAAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCGTCCACCGGCGTG
TGGCGCCGCGGCGCACCGATGCGGTCGGCGCGGTCCTTCTTCGCCTGCGCCGAGGCGGGCGGCAAGATCTACGTCGCGGG
AGGCCACGACAAGCTCAAGAACGCGCTGAAGACGGCGGAGGCGTACGACGCGGGCGCCGACGCCTGGG--------ACCC
GCTGCCGGACATGTCGGAGGAGCGCGACGAGTGCGACGGCATGGCCACCGTCGCTGGCGACCGGTTCCTGGCCGTGAGCG
GGT-----ACCGCACAGGCCGCCAGGGCGGGTTCGAACGCGACGCCGAGTGGTTCGACCCAGCGTCCCGCGAGTGGCGCC
GCCTGGAGCGCGTGCGCGCGCCTCCGTCGGCGGCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTACCGCGGGGAGCGGCGCAGCTGGCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACGGCGCG
CGCGGTCGCCGTCGGAGGCGGCGAGCGCGTGGTGGTGACCGGCGCCATCGAGTCCGAGGGAGGAGGCACGGGGCACGCGC
TGTGGGTGTTCGACGTCAAGTCCAAGAACTGGACCGTGGTGCGGCCGCCGCCGCAGTTCGCCGGCTTCGTCTTCTCCATT
GGATCCGTGCGCGTGTGATG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>chr4A_1114
AAGAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GAGGAACCAGAAGAGCCGTGTCCAGGAGTGCAAGGTCGAGCACGTCGACCTCATCCCGGGCATGCC
GGACGACGTCGCCGTCGACTGCCTGGCGCGCGTCCCGCACGCCTCCTTCCGCTCGATGCGGGGCGTCTGCCGCGGCTGGA
ACACCGCCGCCGCCGCGCCGGACTTCGCGCTGGCGCGCGCCGAGGCCGGCGCCAACGAGGACCTGGTCTACCTGCTGCAG
TTCGGGAACCCGGCGGCCGCGGACGCGGATGGGGCCGCGCCGGAGAACGCCCAGGCGTACGGCGTGTCGGTGTACAACGT
CACCACCGGCGAGTGGCGCCGGGAGGGCGCCGCGCCGCCCGTGCCGATGTTCGCGCAGTGCGCGGCCGTGGGGAGCCGCC
TCGCCGTGCTGGGCGGGTGGGACCCCGAGACCTTCGAGCCCGTGGCGGACGTGCACGTGCTCGACGCCTCCACCGGCGTG
TGGCGCCGCGGCGCGCCCATGCGGTCGGCGCGGTCCTTCTTCGCCTGCGCCGAGGCCGGCGGCAAGATCTACGTCGCGGG
AGGCCACGACAAGCTCAAGAACGCGCTGAAGACGGCGGAGGCGTACGACGCGGGCGCCGACGCCTGGG--------ACCC
GCTCCCGGACATGTCCGAGGAGCGCGACGAGTGCGACGGCATGGCCACCGTCGCCGGCGACCGGTTCCTGGCTGTGAGCG
GGT-----ACCGCACGGGCCGCCAGGGCGGGTTCGAGCGCGACGCCGAGTGGTTCGACCCGGCGTCCCGCGAGTGGCGCC
GGCTGGAGCGCGTGCGCGCGCCGCCGTCGGCGGCGCACGTGGTGGTGCGCGGCCGGGTGTGGTGCATCGAGGGCACGGCC
GTGATGGAGTACCGCGGGGAGCGGCGCAGCTGGCGCGAGGTCGGGCCGTCCCCGCCGGGGCTCAAGGCCGGCACTGCGCG
CGCGGTCGCCGTCGGCGGCGGCGAGCGCGTGGTGGTGACCGGCGCCATCGAGTCCGAGGGCGGAGGCACCGGGCACGCGC
TGTGGGTGTTCGACGTCAAGTCCAAGAGCTGGACCGTGGTGCGCCCACCGCCGCAGTTCGCTGGCTTCGTCTTCTCCATT
GGATCCGTGCGCGTGTGATG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>SNPs
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S---
---SSSS------------SS-S----------S------------------------------------------S---
---S--------------S------------------------S------------------S-----------------
-SS---------------S------------------------------------S------------------------
S----S-------------------------------------S--------------S----S----------------
------------------S--S-------S------------S--------------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------------S-------------------------------------------S---------S-----------
-------S--S---------------------------------------------S-----------------------
------------------------------------------------------------S-------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--------S-----------------------------------S-------------
--S----------------S-----S--------------------------S---------------------------
--------------------------S-----------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
------------------------------------S------------SSSS--------------------------S
----------------SSSSS--------------------------------------------------------S--
-----------------------------------------------------SSSSS----------------------
-------------------------------------------------------------------------S----S-
------------------------------------S-S-----------------------------------------
----------------------------------------------S---------------------------------
-------------SSSS---------------------------------------------------------------
------------------------------------------------------------S-------------------
-----------------------S-----------S--------------------------------------------
---------S--------------------------------------------------------------SSSSSSSS
--------------------------------------------------------------------------------
-----
>forward_47
---------------------------CGCCTCTCGTGATCCTGTAC---------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_1101
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------GCAGAAGCAAAGCTCACACA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_48
----------------------------GCCTCTCGTGATCCTGTACG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_1330
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGCCAACGAGGATCTGGTCT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_136
--------------------------------------------------------------------------------
------------------------------------ACGACTTCTTCCCCGACCTA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_1687
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TGACAAGCTCAAGAACGCGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_148
--------------------------------------------------------------------------------
------------------------------------------------CCGACCTAGGCAACCTCATC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----
>reverse_1862
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TCAGGGAGGATTCGAGCGG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_149
--------------------------------------------------------------------------------
-------------------------------------------------CGACCTAGGCAACCTCATCC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_2437
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------ACAGGAGGCATCAATCATCGC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
