>input_sequence_57078
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------ATGGGGAGGGATCAGCAGGCAGGTGTAGGTGCAGGCGCGGCGGCGGCGCACCGGGAGAAGGTGAAGCTGTTCAT
GGGGGTGCTGGCGCTGCAGTTCCTGCTCGCCGGCTTCCACATCGTCAGCCGGGCGGCGCTCAACATGGGCATCAGCAAGC
TCGTCTTCATCGTCTACCGCAACGTCATCTCCCTCGCCCTCCTCGCCCCCTTCGCCTACTTCCTCGAGAAGTACGTCCGC
GCCTCCACCATTCTTCTCGATCTGCTTCTTCTTCCAGCA------------------------------------ATGGC
GGTGGACGGTTTTCTCAATCCTGG---------TGTGTTTGTTCTTTTTTTTC---TTCAGGAAGGACCGGCCGCCGCTC
ACCTTCTCGCTGCTGGCGGAGTTCTTCGTGCTGGCGCTCATCGGGATCACGGCGAACCAGGGGTTCTACCTGCTGGGGCT
GTACCACCTGTCGCCGACCTACGCGTCGGCGATCCAGAACATGGTGCCAGCCATCACCTTCGTGCTGGCCACGGTCCTCC
GGCTGGAGCAGGTGGACCTGGGCCGGCGGCACGGGGTGGCCAAGGTGGTGGGCACCGTGGTGAGCATCGGCGGCGCCACG
GTGATCACGCTCTACAAGGGCCTGCCGCTCTTCAGCCACAACCTGCACGTGCAGGCCGTCCTCTCCTGGACCTCCGGCAG
CCCCATCTTCAACTGGACCCTAGGCTGCGTCTTCATCCTCGGCCACTGCCTCTCCTGGTCCGGCTGGATGGTGCTCCAGG
TGCCGGTGCTCAAGCGGTACCCGGCGAGGCTGTCGGTCATCTCGCTCACCTGCGTCTTCGGGCTGCTCCAGTTCCTCGTC
ATCGCCGCCTTCACCGAGGAGGACCTCAGCCGGTGGAAGGTGCAGTCCGGCGGGGAGCTGTTCACCATCCTCTACGCGGG
GCTGGTGGCCTCCGGCGTGGCGTTCGCGCTGCAGATCTGGTGCATCGACCGCGGCGGCCCGCTCTTCACCGCCGTGTTCC
AGCCCGTGCAGACCGTCGCCGTCGCCGTCATGGCCGCCGTCATCCTCGGCGACCAGCTCTACACCGGAG-----------
--------------------------------------------------------------------------------
---GGATCATCGGCGCGGTGCTGATCGTCATCGGGCTCTACTTCGTGCTGTGGGGCAAGAGCGAGGAGAAGAAGACGAGG
AGCCAAGACCCGGAGATGGTGAGGCGCCTGCTCGGGGAAGACGGCGGCGCAGCTGACAAAGATCAGCAAGTGAGCACCAC
TGTCCTGGCGTGA-------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G027300
GTAGATATGACTGCGACTTAATTGGAATGTATGTACACATCATG-----------AAATAGTAGTAGTATTTATATGTAC
TATATACGTCTGTGTGGATTCTGATTCAGAATGTAGACCGGATTAACTTTGATGTTCTGGTTCAGAATTCGAATGCAGAC
TGGATCGACCAGTATGTTCGAGCCATAAATTTGCACCCTGAATGCCTACATGGACAGGTGTACTGATTAACTGTTGGTAT
TTATTTATGGCCTCCTGTAGATCACAGCGCATTTCTGTTAAAACGTCCTGGAGAATCAACACGGCAGGTGTATCTGGTCA
AGGAATAGAAGGCAAATAGTATATGTGCATGTCTGTGTGGATGCTAGGTGATAGAACATGGCACCAATGCA-----TTCC
CTTAACATTTCTGTTGTGCTGCTGCTGCTCTGCTGAGAATCAAATTAAGGCGATGCATCATGGGCTGCCCGCTGCAATTA
GGCAG----GCGGCGAGCGATCAATTTTCAGCTGTGCTGTTGATCACTCGCTGCTGCTAATCCGGCGTGCACGTGACGCG
TAATGAATGGGTTAAAGCGATTGCATCATGGGCCTTGATGCAATGCAACGCAATTATGTGAGGCATCAGGCCATGGATCA
ATTCCATTGCTGCTGCTGTTGCTGCTGCTC--------------------------------------------------
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------------------------------------AGGGAGAGAGAGAGCATTCATATTTCATAATCATGCATGCACTT
GCCAGGTCTCTTTAGCTAGCGGTGGAGTTACCAGGACCATGCATGCATGTCTGTCCTGTGTCCGTCTACTGCTGCAGGAC
AGGACAACCACACCGGGATAGGTAGGAGAGGAC------GGAGGGTGCGCTAGTGGCAGCAACAATGGCGACCACTATGG
CAGTACACTATATATACCCCTGCACCCTCCAATTCCTCTCAGCAGAACCACAAGCAGTTAGCACCCCGCATTGTTTCTCT
GT----AGATCACTAACAGGTTGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGAAGGAG----------
GGAGAGATGGGGAGGGATCAGCAGGCAGGTGTAGGTGCAGGCGCGGCGGCGGCGCACCGGGAGAAGGTGAAGCTGTTCAT
GGGGGTGCTGGCGCTGCAGTTCCTGCTCGCCGGCTTCCACATCGTCAGCCGGGCGGCGCTCAACATGGGCATCAGCAAGC
TCGTCTTCATCGTCTACCGCAACGTCATCTCCCTCGCCCTCCTCGCCCCCTTCGCCTACTTCCTCGAGAAGTACGTCCGC
GCCTCCACCATTCTTCTCGATCTGCTTCTTCTTCCAGCA------------------------------------ATGGC
GGTGGACGGTTTTCTCAATCCTGG---------TGTGTTTGTTCTTTTTTTTC---TTCAGGAAGGACCGGCCGCCGCTC
ACCTTCTCGCTGCTGGCGGAGTTCTTCGTGCTGGCGCTCATCGGGATCACGGCGAACCAGGGGTTCTACCTGCTGGGGCT
GTACCACCTGTCGCCGACCTACGCGTCGGCGATCCAGAACATGGTGCCAGCCATCACCTTCGTGCTGGCCACGGTCCTCC
GGCTGGAGCAGGTGGACCTGGGCCGGCGGCACGGGGTGGCCAAGGTGGTGGGCACCGTGGTGAGCATCGGCGGCGCCACG
GTGATCACGCTCTACAAGGGCCTGCCGCTCTTCAGCCACAACCTGCACGTGCAGGCCGTCCTCTCCTGGACCTCCGGCAG
CCCCATCTTCAACTGGACCCTAGGCTGCGTCTTCATCCTCGGCCACTGCCTCTCCTGGTCCGGCTGGATGGTGCTCCAGG
TGCCGGTGCTCAAGCGGTACCCGGCGAGGCTGTCGGTCATCTCGCTCACCTGCGTCTTCGGGCTGCTCCAGTTCCTCGTC
ATCGCCGCCTTCACCGAGGAGGACCTCAGCCGGTGGAAGGTGCAGTCCGGCGGGGAGCTGTTCACCATCCTCTACGCGGG
GCTGGTGGCCTCCGGCGTGGCGTTCGCGCTGCAGATCTGGTGCATCGACCGCGGCGGCCCGCTCTTCACCGCCGTGTTCC
AGCCCGTGCAGACCGTCGCCGTCGCCGTCATGGCCGCCGTCATCCTCGGCGACCAGCTCTACACCGGAG-----------
--------------------------------------------------------------------------------
---GGATCATCGGCGCGGTGCTGATCGTCATCGGGCTCTACTTCGTGCTGTGGGGCAAGAGCGAGGAGAAGAAGACGAGG
AGCCAAGACCCGGAGATGGTGAGGCGCCTGCTCGGGGAAGACGGCGGCGCAGCTGACAAAGATCAGCAAGTGAGCACCAC
TGTCCTGGCGTGAAAGCTGCTGCTTGCTGGAT-----TTGGAGATGTGTGTACTGATGTGGGTGTTTGTACCTACGTTTT
TA---------ACTAGTGTTTCAAGCGTGCG-----ACCAAGAAGAAGAAGACTCGTACTAGTTGACGATGTGAACTGCC
AAACACACTCAGTCATATTTGGTACCTACTGTGTATAGCCCCTTGTCTTCGAGTTGTGTGTGTGT--CTATAAATACACT
ATGCTCCCTAATTTTGAAGCCCTCCCATTCTATATTGGGGTGTTCGATTTAGAA-------TTTGGTTTATGATTTTGGC
TGGGTGAACGATTTTGATTGAGGTTATTTTAAGTTTGGTTCATAGTTTTTATTCGATTTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTTTT-AGTTATTTGGATTGCTTACCACATGTGTCATGTGTTGTCTCACT
GTTGGCACTTAGACTTCCTGTGAAGTATCCATTGG-------ATGATGGATGATGACCTCTTGGGTTGTAACCTTGATGG
GCCTGGGCCTTTGACTAGAACATATGTATCCGGGCCTACTTCGTAGGTATTCCCCCGTAAAGTTTTAATCATGACATGTT
AGGTGAATGCGGAAGAAAGACGGCAATGTTTCCTTCAAGGACTTGCGTGTTATTGCTATAAAGAAGTTCTTGTAAGGATT
GGTTTCATCTAATA------------------------------------------------------------------
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--------------------------------------TGTGGCTTCGGCGTTTCCGAAAAAGGGATGTGGGGCTGAGAA
TTTTGACTTTTGAGGACCCTGTTTGATCATGTG
>chr3B_7
------ATGACTATGACTGAATTAGAATGTATGTACACATCACGTACTAATTAGCAAACAGTAGTATCTATT--------
--TATACGTGTGTGTGGATTCTGATTCAGAATGTAGACCGGATTT-----------------------------------
-------ACAAGGATGTTCGTGCCATAAAGGTGCACCCTGCCTGCCTACATGGACAGGCGTACCATTTAACTGTTGGTAT
TTATTTATGGCCTCCTGTAGATCACAGCGCATTTCTGTTAAAACGTCCTGGAGAATCAACACGGCAGGTGCATCCGGTCA
AGGAATAAAAGGCGAATAGTATATGTGCATGTCTGTGTGGATGCTGGGTGATAGAACATGGCACCAATGCA-----TCCC
CTAAACATTTCTG----------------CTGCTGAGAATCAAATTAAGGCGACGCATCATGGGCTGCCCGCCGCAATTA
GGCAGGCGCGCGGCGAGCGATCAATTTCGGTTGAGCTGTT-----GATCGGTGCTGGTAATCGGGCGTGCACGTGACGGG
TGATGAATGGGTTAAAGCGATTGCATCATGGGCCTTGATGCA-----ACACAATTATGTGAGGCATTAGGCCATGGACCA
ATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAGAGAGAGAGAGAGAGCAT-------TCATAATCATGCATGCACTT
GCCAGGTCTCTATAGCTAGCGGTCGAGTTACCAGGACCATGCA----CGTCTGTCCTGTGTCCGTCTACTGCTCCACGAC
AGGACAACCACACCGGGATAGGTAGGAGAGGCCACCCA--GAGGATGCGCTAGTG---GCAACAATGGCGCCCACTATGG
-----CACTATATATACCCCTGCACCCTCCAATTCCTCTCAACACAACCACAAGCAGTTAGTAATCTGCATTCTTTCTCT
GTACGTAGATCACTGACAAGTTGTAGA----------------------------------------GAGAAAGTGAGGA
GGAGAGATGGGGAGGGATCAGCAGGCG------------GGCGCGGCGGCGGCGCACCGGGAGAAGGTGAAGCTGTTCAT
GGGCGTGCTGGCGCTGCAGTTCCTGCTCGCCGGCTTCCACATCGTCAGCCGCGCCGCGCTCAACATGGGCATCAGCAAGC
TCGTCTTCATCGTCTACCGCAACGTCATCTCCCTCGCCCTCCTCGCCCCCTTCGCCTACTTCCTCGAGAAGTACGTC---
GCCGCCTCCATTCTTCTTC-TCTGCTTCATCTTCCAGCAGTTTCAAGAAAGCTTCTGCCAGTCAGTCAGAAAACAATGGC
GGTGTACAGTTTTTTGAATCCTGG---------CGTGTCTGTTCTTTTTTCCATCATTCAGGAAGGACCGGCCGCCGCTC
ACCTTCTCGCTGCTGGCGGAGTTCTTCGTGCTGGCGCTCATCGGGATCACGGCGAACCAGGGGTTCTACCTGCTGGGGCT
GTACCACCTGTCGCCGACCTACGCCTCCGCGATCCAGAACATGGTGCCGGCCATCACCTTCGTGCTGGCCGCGGTCCTCC
GGCTGGAGCAGGTGGACCTGGGCCGGCGGCATGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATCGGCGGCGCCACG
GTGATCACGCTCTACAAGGGCCTGCCGCTCTTCAGCCACAACCTGCACGTGCAGGCCGTGCTCTCCTGGACCTCCGGCAG
CCCCATCTTCAACTGGACCCTCGGCTGCGTCTTCATCCTCGGCCACTGCCTCTCCTGGTCGGGATGGATGGTGCTCCAGG
TGCCCGTGCTCAAGCGGTACCCGGCGAGGCTGTCGGTCATCTCGCTCACCTGCGTCTTCGGGCTGCTCCAGTTCCTCGTC
ATCGCCGCCTTCACCGAGGAGGACATGAGCCGGTGGAAGGTGCAGTCCGTCGGGGAGCTCTTCACCATCCTCTACGCCGG
GCTGGTGGCCTCCGGCGTGGCGTTCGCCCTGCAGATCTGGTGCATCGACCGCGGCGGCCCGCTCTTCACCGCCGTGTTCC
AGCCCGTGCAGACCGTCGCCGTCGCCGTCATGGCCGCCATCATCCTCGGAGACCAGCTCTACACCGGAGGGTAAGTAGAG
AG-TAAAATCCACATACACCAACATTGTGACAGCACCATTGCACTCTTGTCTGACTGACATGATTCATGGCTGCTTGTGC
GCAGGATCATCGGCGCGGTGCTGATCGTCATCGGGCTCTACTTCGTGCTGTGGGGCAAGAGCGAGGAGAAGAAGACGAGG
AGCCAAGATCCCGAGATGGCGAGGCACCTGCTGGGGGAAGACGGCGGCGAGGCTGACAAAGATCAGCAAGTGAGCACCGC
TGTGCTGGCGTGAAAGCTGCTAGCTGCTGGATATCCCTTGGAGATGTGTGTACTGATGTGGGTGTTTGAACGTACTCCTA
CCTTTTTAACTACTAGTGTTTCAAGCGTGCGATGCGACCAAGAAGAAGAAGACCCGTACTAGTTGACGATGTGAACTGCC
AAACACACTCAGACATATTTGGTACCTACTGTGTATAGCCCCTTGTCTTCGAGTTGTGTGTGT----CTATAAATACACT
ATGCTCCCTAATTTTGAAGCTCTCCCAGTCTAG-TTGTGGTGTTCAATTTTAGAAT-----TTTGGATTATGATTTTCAC
TGGGTCAACGATTTTGATTGAGGTTATTTTAAATTTGGTTTACAATTTTTCTTCAGTTAGGTG-------GGGGAGGGGG
TTATATAATCCGACTGTTGAAACTT-------------------------------------------------------
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------------------------------TTTTTAAATAGTTTAAATTGCTTACCACATGTGTCATGTGGTATCCGACT
GTTGGCACTTAGTCTTCGTTTGAAATATCCATTGC-------ATGATG-------ACCTCTCTGGTTGTAACCTTGATGG
GCCTGGGCCTTTGACTGGGCCATAT------GGGCCTACCCCGTAGGTATTCTCCCTTCTAGTTTTAATCGTGGCACGTT
GCCGCTGTATGTGA------------------------------------------------------------------
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-------------------------------AAGAAAGATGGCGTTGCTTTCAAGGACTTGCGTGCAATTTATTATTCAT
GTAAATGAGTTCTTGTAAGGGCTGGTTTC---------------------------------------------------
---------------------------------
>chr3A_15
--------------GACTGAATTAGAATGTATGTACACATCATGTACTAATTAGCAAATAGTAGTATCTATT--------
--TATACGTCTGTGAGGATTCTGATTCAGAATGTAGACCGGATTT-----------------------------------
-------ACAAGGATGTTCGTGCCATAAATGTGCACCCTGCCTGCCTACATGGACAGGTGTACCATTTAACTGTTGGTAT
TTATTTATGGTCTCCTGTAGATCACAGCGCATTTCTGTTAAAACGTCCCAGAGAATCAACACATCACGT--ATCCGGTCA
AGGAATAAAAGGCAAATAGTATATGTGCATGTCTGTGTGGATGCTGGGCGATAGAACATGGCACCAATGCATTGCATCCC
CTAAACATTTCTG----------------CTGCTGAGAATCAAATTAAGGCGATGCATCATGGGCTGCCCGCCGCAATTA
GT------------------------------TGAGGTGTTGATCGATCGCTGCTGGTAATCCGGCGTGCACGTGACGGG
TAATGAATGGGGTAAAGCGATTGCATC----------------------GCAATTATGCGAGGCATTAGGCCATGGATCA
ATTC----------------------------------------------------------------------------
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-------------------------AGTTACCAGGACCATGTA----TGTCTGTCCTGTGTCCGTCTACTGCTCAAGGAC
AGGACAACCACACCGGGATAGGCAGGAGAGGCCACCGGAGGATGATGCGCCAGTGGCAGCAACAATGGCGGC--------
-----CACTATATATACCCCTGCACCCTCCAATTCCTCTCAACACAACCACAAGCAGTTAGTAATCTGTATTATTTCTCT
GTACGTAGATCGCTGACAAATTGTAGA----------------------------------------GAG----------
GGAGAGATGGGGAGGGATCTGCAGGCCGGTTTGGGTGCAGGCGCGGCGGCGGCGCACCGGGAGAAGGTGAAGCTGTTCAT
GGGGGTGCTGGCGCTGCAGTTCCTGCTCGCCGGCTTCCACATCGTCAGCCGGGCGGCGCTCAACATGGGCATCAGCAAGC
TCGTCTTCATCGTCTACCGCAACGTCATCTCCCTCGCCCTCCTCGCCCCCTTCGCCTACTTCCTCGAGAAGTACGTCCGC
GCCTCCACCATTCTTCTTC-TCCGCTTCTTCTTCCAGCA------------------------------------ATGGT
GGTGGACGGTTTTCTGAATCCTGGTAGTGTCTCTGTTTTTCTTCTTCTTCTTC---TTCAGGAAGGACAGGCCGCCGCTC
ACCTTCTCGCTGCTGGCCGAGTTCTTCGTGCTGGCGCTCATCGGGATCACGGCGAACCAGGGGTTCTACCTGCTGGGGCT
GTACCACCTGTCGCCGACGTACGCGTCGGCGATCCAGAACATGGTGCCCGCCATCACCTTCGTGCTGGCCGCGGTCCTCC
GGCTGGAGCAGGTGGACCTGGGCCGGCGGCACGGGGTGGCCAAGGTGGTGGGCACGGTGGTGAGCATCGGGGGCGCCACG
GTGATCACGCTCTACAAGGGCCTGCCGCTCTTCAGCCACAACCTGCACGTGCAGGCCGTCCTCTCCTGGACCTCCGGCAG
CCCCATCTTCAACTGGACGCTCGGCTGCGTCTTCATCCTCGGCCACTGCCTCTCCTGGTCGGGATGGATGGTGCTCCAGG
TGCCGGTCCTCAAGCGGTACCCGGCGCGCCTCTCGGTGATCTCCCTCACCTGCGTCTTCGGGCTACTCCAGTTCCTCGTC
ATCGCCGCCTTCACGGAGGAGGACCTGAGCCGGTGGAAGGTGCGGTCCGGCGGGGAGCTCTTCACCATCCTCTACGCGGG
GCTGGTGGCCTCCGGCGTGGCGTTCGCGCTGCAGATCTGGTGCATCGACCGCGGGGGCCCGCTCTTCACCGCCGTCTTCC
AGCCCGTGCAGACCGTCGCGGTCGCCGTCATGGCCGCCATCATCCTCGGCGACCAGCTCTACACCGGAGGGTAAGCACGG
AGATACAATCCACATACACGAGCATTTTGACAGCACCATTGCA--CTTGTCTGACTGACATGATCCATGGCTGCTTGTGC
GCAGGATCATCGGCGCGGTGCTGATCGTCATCGGGCTCTACTTCGTGCTGTGGGGCAAGAGCGAGGAGAAGAAGACGAGG
AGCCAGGACCCGGAGATGGCGAGGCACCTGCTCGGGGAAGACGGCGGCGCGGCTGACAAAGATCAGCAAGTG--------
----CTGGCGTGACAGCTGCTGCTT----GATATTCCTTGGAGATGTGTGTACTGATGTGGGTGTTTGTACCTACGTTTT
TA---------ACTAGTGTTTCAAGCGTGCGTTACGACCAAGAAGAAGAAGACTCGTACTAGTTGACGATGTGAACTGCC
AAACACACTCAGTCATATTTGGTACCTACTGTGTATAGCCCCT-GTCTTCGAGTTGTGTGTGTGTGTCTATAAATACACT
ATGCTCCCTAATTTTGAAGCTCTCCCATTC--TATTGGGGTGTTCAATTTAGAATTTAGAATTTGGTTTATGGTTTTTGT
GGGGTCAACTATTTTGA-TGAAGTTATTTTGAATTTGGTTCATAGTTTTTATTCGGTTTTGTGTGTGGGTGGGGAGGGGG
GAGTGATATCTGACCGTTGGCACTA-------------------------------------------------------
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------------------------------TTTTT-AATTGTTTGGATTGCTTACCACATGTGTCATGTGCTGTCTCACT
GTTGGCACTTAGTCTTCCTATGAAGTATCCATTGGATGATGGATGATG-------ACCTCTTGGGTTGTAACCCTGATGG
GCTTGGGCCTTTGACTAGGACATATGTATCAGGCCCTACTCCGTAGCTATTCCCCCGTAAAGTTTTATACT---------
-GGTGAATGCAGAAGAAAGACGTTGATGTTTCCTTCAAGGACTTGCGTGTTATTGCCATAAAGAAGTTCTTGCAAGGATT
GGTTTCATCTAATACGTGACTTTGGCGTTTCCGGAAAAGGGACGCGGGCTGAGAATTTTGACTTTTGAGGACCTTGTTTG
ATCATGTAGTCACAGTCCTAACTCCTAAGTCGTGTCAAAAGTTTCCCTATTAATGGGACGGAAATGCATAGGGGAGTGCG
AGTGCGGCTCGTTTTGTCTCGTGATTTGCGCAGTAAGTCAATCCCGAACTAGAGCACAGTAAAAATAAAAAACCTCAAAA
AAGTTATCAGTTTCAACAACGAAACTTACAATTTTTTCCTTTAAAACTGTCAAGTTTCAACCAGTTTCAGATATATAATT
TCAAACATATTTTTTCTGTAGATCATAGGCACAAAATAATTGATTTTATCAGTCACTCGTACTAAGTTTCAACATTGAAA
CTTCACATATTTTTTTAAAGTTGTCAAAATATATACAAAATGGATCTTGTTTGAAAGAGCTGATCATGAGAAACATGAAT
ATGAAAACAAAACTTAATTTAGAATTTTCATTTAGAAGATATAAAACTTTGAAAATCGGAAGCCAAAATAAAAAGCAGGC
ACCAGAGACATGCATGCCCCCGCACTTAGGTGCCACACATCCTCTCCCGGGAGGCAGTTTAACATCAATCAAGCCTTGTG
TGACAAAATGCTCTTACCTACGATATGTTCATGCATAGATTCACTGCCAAAGACTAATGTTGTGGTGAGATGACCTGGAA
TTTCTAGGCCTAAAGAAAGGGTGGTCTTGGGATTCACACTCTAGAAAGATATAGTATTAGCTTGTTGTTTATGTTGTGGT
GGAGATTGTTTAGAGAGGGGATGGCAGGTGACAATGTATCGTTAGGGAAGAATATAAGTCACAGAATGGAATATGTCGTG
TGAGCAGAAAGGCTGATTATTCCGCTTACTCAGCAGATCTGATCAAAGTCAAAGCCATTAGAGATGTATGGTAGTTGCAT
ATGGGAGACAGACTGATTTCTTGGAGGATGCTTGGTGTCGTTTAACTGCCCTGCGACATGAGTATCTGGGCATGTTGGAT
GTCAATAATGAAGTGGGATGCACTTGTTAAGAAAATGGCTGATAATGCGAGTTGGCACTGCAATTTCAGAAGATGGTTGG
GGACTCTTGGGGTTAGGATTGGCAACGGCTGCTGGTCTCTTTGAGAAGTAAGCTGGTGAGAGTGGCAGATCATACCATGT
ATCAGACCACCGACCAATTATTATTTATCCTTTCGATCGTATTGTGACGATTCTCTTGGGATCAACATGTGAGGGTGTGA
TGATTATTCATGAGTAGACTGATGACACTGCATAAAAAAATACTCCCCCTATATCAAAATATAATACACTTTTGACTAAA
AAACCATCCTATATTTTGCCTAAAATTATCTTATATTTTGATATGGAGGGAGTATGAAGTAGTCTGATGACATGGACGGC
AAAGTGGATCATGAATCATGTGCGGTTACGAATTTACTCTTCCATGTTTGAAAGAGTCACATGATTAATGAAATGACCCC
GTTTGGAAGGATCTGCGAGGTCAAACCGTGGCAGATTATAAGGAACGCGCGGTAGCACACAAGTTTAGATTGAACTCCCC
TCAGGAAAAGTGAGTTCAGTTTAGCTCATATAGAGCATTCGATTTCATCGGGATCGGAATGAATGGTGGTATTACATGCA
TGGACCGTACTAGGACAAATGCCACTACGTTAACAATGTAGTGCACCAAACCTATGAAACGTGGAAAAAAAACTGGCGTT
ATCCTTCCAAGGCGATCTAATCTGATCTTGTGTCGCTGCTCTTCCTTATCATACCGTTCAATGCCCTCATGCTCCTCGCA
CGCCAGCGACCCTCCGGGCCGCGGCCCCTCTTTCTACGATAGATTGTGGCCACCTGGGACCAGATCCATGGACAGACTGC
CCCTCTTCTGGTGGGTCCCTTTTCGATGGGGCGACACCGCCCATCTTGGATGTGTCGGGGTCCACTCCCAGCTAGGTGGC
TCTTCTCGAAAGCCTTGACCGGTGGCTGCAGTGTTTCCTTCAGCGGTGGTGTTAGATGGTTGGGGCCGGGGCCTTGGGAG
CTGTTGCCAAGCGAGTTGCAACCTCAATGTTCGATGGCCGCCAGCCAGATCTGACTCACGTGTGTGTCTGGATGTCGTCG
TCGGGGGGAATGCTTCTCTTGGCTTTGTCCAGTGGCAGCTCCCACGCTTGGATCTGGAGGCTCGAGCTGGAAGTGGCGAC
TCTCTTCTTGGGTTGGGTTGGCAACCTTGGTACCACGGGTGGCACAAATAGGCTCCAAGCGAAAACTCCACATTTCGGTG
TTAGTGATGGTGATGCCTGCATGTGTGGTTTCCCTCTTAGTGAATTCGTTTTGGGCCCTCTCTCTATGTCAGGGCTCCGA
GTGAAACCCTTGTCCATCTTAGGTTCAGCGGTGGCGGTGTCTTGCATCGTCACCCTTTTGTGGGTGGCGTCATGGGGCCC
CGGTACCTTCTGGTTGAAGCTCATCCGTGGCTTCGGGCGTGCTTTCATACCAATGTGTACGTAGCTTCCTCGACTCTGCG
TGGGGTGGTCTCGGTTGCCTCTTATCTATTACATGTGTCCCCATTGCCTGGGTCATCGTGGTCTCATGGCACGGTTGGCA
CTCCACATTCCGGAGCGAGAGGGCAGGTGGCCCTCCCTAAAGATAGCTTGGTGTAGTGGGTGCAATGTAGTCCGGTGGTT
TTTTCAAGGCGGCACGCTTCAATTGCTGCTCAGTAACTTGGGATACTCATGTTAAGTGGAGGGTCTCCTGCATTCTGTCT
CGACTGTGAGTTTGTGGCCACTGCTAGTCTTCCGGATGTTGTTCATCACGAACTTTGTATGATTGTATGGGCGCATGGGC
ATTGGGCAGGGGAAATAGGGAACCAGGCACACGTACGTGTGGGACGCCACAGGACAGATCTGCATGCTGTCCCGTCGATG
GACCTATCTAGCTACTGTAGGGCGACAGCGCCCATGCATCCATGATCCATCTAGTGCGACTTCTCTCCTCCTTGTCCCTT
TGCGTTTTGCATCCTGATTAGCAAGCTAGCTAAGGTCTGTGCTGCATGCATGCGTGCTTGCTCGCAGTGGCCGTTCATGT
ATGGCTGTTATACCGACAGAAATCATCAAATGAGAAGGGTCCATGGCTCCATGCATGCAGGCAGTGCACCCACACACGCG
CTGTCGTCTTGGCCGTACGTGCGTCTACCAGTCTGGTGCACATGGCGAGTGATCCAACATCTCACGTACCAACCAGTACT
ACTACCATACTCCCCAGACCAAACTTCTCTAGGTTAGAGCTCTTGTTGCACTTCACAGGGCCTGGTCCATTCCACATAAT
TAAGGCGGGATTAGTTGTACCTAGTTCGTTAAACAGGGGATCCATCAGTCCATAGTCCATGGAGCATATCGTGCTGTATG
TATCCCGGGCCGTTCCACCTAGGAAAGATGTACTCTCTCCATCCCAGTGTAAAAAACGCTCTTATATTATGAGACGGAGC
GTGTATCTATTTTAGAATATCCTTGTGATAGTCTTGCGATTCATGCATGATTCTCTTGGATCAGCTCCAGATGGATGTAT
GGTGTGATCATGACAATACGTGAGCGGTACGGTCTGCCTGTCGACATGGACGATCATGCATGATTCATGTCCGTGTGGTA
TGATTTTTTCCCAACTTGATGGGCCTGGATCTTTGACTCAGCCATATGGGCCTGCCCCGTAGGTATTCCCCCGTCTAGTT
TTAATCACGGCACTTTGCCAGGTGAATGAGGAAGAAAGACGGCGTTGTTGTCAAGGACTTGCATGCAATTTATTATTCCT
GTAAATAAGTTCTTGTAAGGGCTGGTTTCATCTAAGGGTGTGGCTTCGGCCTTTCCGAAAAAAGGATGTGTGTGTGAGTG
TTTTGACTTTTGAGGACCCTGTTTGATCATGT-
>SNPs
SSSSSS------SS----S----S------------------------------------------SSSS--SSSSSSSS
SS------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--S--S-------S---------S---------SS---------------------SSS--------------
----------------------------------------------------------------------S---S-----
-------S-------------------------------------S-------------------------------S--
--S----------SSSSSSSSSSSSSSSS-------------------------------------------S-------
---------------------------SSSSS--S-S--------SS---------S---------------------S-
------------------------------------------SSSSS-------------------S-------------
-----SSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------S--------------SSSSSSS--------------------
-----------S-----------S-------------------SSSS--------------------------S------
-------------------------------S------------S-------------------------S---------
SSSSS------------------------------------S--S----------------S-SS-S-----S-------
--------------S---S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
--------------------------S---S-S-----------------------------------------------
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-----------------SSS------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S---------------------S---------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------------S--S----------------
--------------------------------------------------------------------------------
--------------------------S--------------------------------S--------------------
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--------------------------------------S-----------------------------------------
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-------------------S-----S------------------------S---------------------------S-
---S----------------------------------------------------------------------------
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--------------------S------------------------S-------------------------------S--
-----S--------------------------S----------------------S----SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--S-----------------------------S---------
------------S------S----------------------------SSSSSSS-------------------------
------------------S-----------S---------S-----------------------------S--S--S---
S---------------------SSS-------------------------------S---------------S-------
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--------------------------------------------------S-----------S-------S-SS----SS
--------------------------------S
>forward_1114
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------------------------------------------------------CCTGTGTCCGTCTACTGCTG------
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>reverse_3038
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-----------------------------------------------------------------------------GGC
TGGGTGAACGATTTTGA---------------------------------------------------------------
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---------------------------------
