>input_sequence_57073
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----ACCAACCATCAGGCTATACTACCTCATTCCTCTCGTGCTTCTACTAGCTACC-TGCAGGCTGTAGATATTTGTCAT
CGATCATCACCAACTTTTCAGTTCAAGCTAGGTAGCTAGCCATGGCTAGGGTGCTGGAGCCTCTCATCATTGGAAAGGTC
ATCGGGGAGGTCATCGACAACTTCAACCCAACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAACGG
CCACGAGTTCTTCCCGTCGGCGGTCGTGTCCAAGCCACGCATTGAAGTCCAGGGTGGGGACATGAGATCCTTCTTCACTC
TGGTTTGCGCCTCCTATCC-----TCTCCGGCCATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATA
AATGAGTGTTGTC---GCTCTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTTAGGGAGCATC
TCCACTGGTAATTA--CTAACCCAAACTAGTTTACAGTACTCGAGCAATCGAAAGCCTAA-C---GACTATAAAGA----
------------------------------------CCAATAAGCTCAGCACAACATGGAAAAATCTCTATAACGTGAAA
GACATACATATCAGTCCAAGTGAGCTACATGTTTAAGACCAAATTAATTTAGCTGGTGATCAATTAGGTTCTTTCCTATG
GACATAAAACTTATCAGTTTTTGTTTAGTGAATATAAATGGT--CAGATTTATATGATCAGCTATGCATAAAAACATGCT
TGATCAGATTATGACT-----------TGTGCATGCAGGATCGTCAGTGATATTCCTGGCACCACAGATGCTTCTTTTGG
TAAGTCCTTTTCATGCATGACT-GCTTTATCTTTTGCTGATTGG----TCCCATCCTTAA-TTTCCCTGAATAAACACAT
G-------AATGCATGCAGGAAGGGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTT
CGTGCTGTTCCAACAGAAGAAGCGGCAGGCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACACGCCGCT
TCGCTGACGAGAACGACCTTGGCCTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGC
TGACGGAAACAATCAGCCCACCCCTTCTTCTCTTGCATGCATGGCGCATGCAACAAGCCTATGGATCAACCTATAGCT--
---ACTATTAGCTACCATCTACGTATATCTCCACTCAAATAAG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr2D_1_TraesCS2D01G292000
AAGATGTTTTGAACTGCAAAAACATCTTATATTAGCGTACAGAGATAATACAACATCTTATATTTGTGAACGGAGGGAGT
ACATAAGATCAGAAATTATCCAAATAACAGTTACAAACACCAAGCCCAAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAGAGCGAATATGAGCAAACTAGAGACAAGCACAGAGGGACGCCAGTGGAGCGCACGCACTCTGTTTTTGCAC
CCCTTTGGGCTTTGGTGTTCTCCCTGCCGCAATCAAGTTTTTGAGCGCAGAGTTGGAGCATCATATCTCCCTGCACTGAA
CTCACTACTGCGCTTTCTTCTTCTTCTTTTTGCGGGTCACTACTGCGCTTTCTCATAATATAATTGTAATACCTGATAAA
ATTACAGTATTGCAAAAATATTCCAGTACAGATCAACAAATAATTTTCCAAATACATATTCTTTTGACTGGGTAGAATTA
AACTATATGCATGCATGCATTTTCAAGAGAAAAAT---AAGAAAAAAGAAGCATTTTGATAGAAATATAAATACATA---
-GTATTAGACTTAATGGTGTAGGCCATACTCAATCATCACTAAGACAATTTTGAAAAAGGCCTTTAAGCAATTGTCAATG
CGCTCAAACAGTGTGGCTTCTAATAATGTCCCGCGGAAGGATCGATGAACTGTTTCGGGAACTTGTACTATGGTACAATT
GATCTACCTCAGCTTGGGACTTTGTAGGCGCATACATGGCAATAAGGCTTTCTTCTTTTACCAAATGTGTGGATTCTGTG
CATTATTAACTCGAACAAACTTCTCCCAAAACCCACCTATCACGAATATACAGACTTATGCTAGTTTTCAGGTTTGAAAC
CTTTTTAAGGTGTATGCCCCAGTTTTATAGTGCGCAAGGACAGAATAATCAAACATCACCTAGTGATAATCTAGCTTTAA
AACTTCACCCTCCTCACACACAGCTCACTCACCTCGCGGCTCTCCACAGCTATAAATAGAGCCTCCACGCCACCCAACCT
CAACACCAACCATCAGGCTATACTACCTCATTCCTCTCGTGCTTCTACTAGCTACC-TGCAGGCTGTAGATATTTGTCAT
CGATCATCACCAACTTTTCAGTTCAAGCTAGGTAGCTAGCCATGGCTAGGGTGCTGGAGCCTCTCATCATTGGAAAGGTC
ATCGGGGAGGTCATCGACAACTTCAACCCAACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAACGG
CCACGAGTTCTTCCCGTCGGCGGTCGTGTCCAAGCCACGCATTGAAGTCCAGGGTGGGGACATGAGATCCTTCTTCACTC
TGGTTTGCGCCTCCTATCC-----TCTCCGGCCATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATA
AATGAGTGTTGTC---GCTCTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTTAGGGAGCATC
TCCACTGGTAATTA--CTAACCCAAACTAGTTTACAGTACTCGAGCAATCGAAAGCCTAA-C---GACTATAAAGA----
------------------------------------CCAATAAGCTCAGCACAACATGGAAAAATCTCTATAACGTGAAA
GACATACATATCAGTCCAAGTGAGCTACATGTTTAAGACCAAATTAATTTAGCTGGTGATCAATTAGGTTCTTTCCTATG
GACATAAAACTTATCAGTTTTTGTTTAGTGAATATAAATGGT--CAGATTTATATGATCAGCTATGCATAAAAACATGCT
TGATCAGATTATGACT-----------TGTGCATGCAGGATCGTCAGTGATATTCCTGGCACCACAGATGCTTCTTTTGG
TAAGTCCTTTTCATGCATGACT-GCTTTATCTTTTGCTGATTGG----TCCCATCCTTAA-TTTCCCTGAATAAACACAT
G-------AATGCATGCAGGAAGGGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTT
CGTGCTGTTCCAACAGAAGAAGCGGCAGGCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACACGCCGCT
TCGCTGACGAGAACGACCTTGGCCTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGC
TGACGGAAACAATCAGCCCACCCCTTCTTCTCTTGCATGCATGGCGCATGCAACAAGCCTATGGATCAACCTATAGCT--
---ACTATTAGCTACCATCTACGTATATCTCCACTCAAATAAGAGTTTGCTTGTGAGCGTCTTGTGTGTGTTGTTTCCAG
TAGTCTTTCTACTGTTCAGTTTTTTCTTCGGTCAATTTAGTT----------ACTAGTTGATCTGTGAACCAGTGTACGT
GCAACCTACATCTACCACTAGTGTGAATTTGATTCAGCTCCTATTTGTGGAGACGAAGGTTATATGCGTCCACGATGCAG
TGTGC-------TGGCAACACAGTTGGGGGCTGAGAGGC-CGATGCATACTAGTGTTGACTGGGACTTTGGAAGCAGATT
GATAGCT----GAAGACCGTCGACATGTCTGGTAGTGGAAGGAGGAAAAG-------------ACAATAGCCATGGCCCA
GCCACTAGTACTCCCAGTAACC-----------------------------------------TACTATTTTGTCATGTG
CGTGCATGCATGTGTCGCTGCTAGCTCACTGCAGCCTATAGCTTGCAGTGTACCAGCTTGTACCCGATGCAGTAAGCCTG
CTATG----TAGGTTGTGACCATTATCTCTCCATCTGCTCCGACCTTTTCTGTATGACAAGACATGCATTGCTATGTATA
TGCCTCGATTGTGTGTAATATGT-------------------TAGGTCTTGACGTATCTACTGTGTGTGGGCGAT-TTTA
TAATGTTAATATGGCT-----------GCTGATGAGAAGAGGCATCAGTTCTTGGCCCCCCTTTCCCCATCATTTGGGTG
T-----CCCTTTTGGTCGATTTGGCAATATTAGATCATTAGCATATGCGCCTAAG------------CCTTAATTAAGTT
TCTCGTACTTTCTGGAT----ATGCCTAGCTAGTT----TATACATGAAAAGGTAATCTTAATTTTATTGGC-CATAATA
TCTAACATGTACAACACGGTTCATATATACAAGCATACCACAATGGT-----------TACGACAATCAACAAAGATGGA
CAAAAGTGGTAGCACGGAACGTACAAGTAGTTATAACGGATGAATCAATTACGCAATGGAGATTGGAGTGGTTTACATAT
ATCCAACATATCATTACCAAAAGTTTAAATGTACTCACAGGGTAAAATGGTCATTCACAAGGGCGGAGCTC
>chr2B_1
AAGATGCTTTGAACTGCAAAAACATCTTATATTAGTGTACAGAGGTAATACAACATCTTATATTTGTGAACGGATGGAGT
ACATAAGATCAGAAATTATCC-AATAACAGTTACAAACACCAAGCCCAAC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------AAGAGCGAATAGGAGCAAACTCGAGACAGGTACAGAGGGACACCAGTGGAGCGCACGCAGTCTGTTTTTGCAC
CCCTT-GGGCTTTGGTGT-----------CAATCACG--TTTGAGCGCAGAGTTGGAGCACCATATCTCCCTGCTCTGCA
C-----------------------------------TCACTACTGCGCTTTCTCATTATATAATTGCAATACCTAATAAA
ATTATAGTATTGCAAAAATATTCCAGTACAGATCAACAAATAATTTTCCAAATATATATTCTTTTGACTGGATAGAATTA
AACTATATGCATGCATGCATTTTCAAGTGAAAAAT---AAGAAAAACGAAGCATTTTGACATAGATATAAATACATA---
-GTATTAGACTTAATGGTGTAGGCCATACTCAATCATCACTAAGACAATTTTGAAAAAGGCCTTTAAGCAATTGTCAATG
CGCTCAAACAGTGCGGCTTCTAAATATGTGCTGCGGAAGGATCAATGAACTGTTTCGGGAACTTG---TATGGTACAATT
GATCTACCTCAGCTTGGGACTTTGTAGGCGCATACATGGCAATAAGGCTTTCTTCTTTTACCAAATGTGGGGATTCTGTG
CATTATTAACTCGAACAAACTTCCTCCATAACCCACCTATCACAAATATACAGACTTATGCTAGTTTTCAGGTTTGAAAC
CTTT-TAAGGTGTATGCCCCAGTTTTATAGTGCGCAAGGACGGAATAATCAAACATCACCTAGTGATAATCTAGCTTTAA
AACTTCACCCTCCTCACACACAGCTCACTCAGCTCGCGGCTCTCCACAGCTATAAATAGAGCCTCTACGCCACCCAACCT
CAACACCAACCATCAGGTTATACTACCTCATTCCTCTCGTGCTTCTACTAGCTACCCTGCCGGCTGTAGATATCTGTCAT
CGATCATCACCAACTTTTCAGTTCAAGCTAGGTAGCTAGCCATGGCTAGGGTGCTGGAGCCTCTCGTCGTTGGAAAGGTC
ATCGGGGAGGTCATCGACAACTTTAACCCCACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAATGG
CCACGAGTTCTTCCCGTCGGCGGTCGTGTCCAAGCCACGCATTGAGGTCCAGGGCGGCGACATGAGATCCTTCTTCACTC
TGGTTTGCCCCTCCTCTCCTCTCCTCTCCGGCCATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATA
ACTGGGTGTTGTC---GCTCTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATC
TCCACTGGTAATTA--CTAACCCAAGCTAGTTTACAGTACTCGAGCAATCAAAAAGCCTGATCATGACTATAAAGA----
------------------------------------CCAATAAGCTCAGCATAACATGGAAAAATCTCTATAACGTGAAA
GACATACATATCAGTCCAAGTGAGCTACATGTTTAAGACCAAATTAATTTATCTGGTGATCAATTAGGAGCTTTCCTATG
GACATAAAACTTGACAGTTTTTGTTTAGTGAATATAAACAGT--CAGATTTATATGACCAGCTATGCATAAAAACATGCT
TGATCAGATTCTGACT-----------TGTGTATGCAGGATCGTCAATGATATTCCTGGCACCACAGATGCTTCTTTTGG
TAAGTCCTTTTCATGCATGACTTGCTTTAGCTTTTGCTGATTGG----CCCCATCCTTAA-TTTCTCTGAATAAACACAT
G-------AATGCATGCAGGAAGGGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTT
CGTGCTGTTCCAACAGAAGAAGCGGCAGTCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACGCGCCGCT
TCGCTGACGAGAACGACCTTGGCCTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGC
TGACGGAAACAATCAGCCCAACCCTTCTTCTCTTGCATGCATGGCGCATGCAACAAGCCTATGGATCAACCTATAGCT--
---ACCATTAGCTACCATCTACATATATCTCCAACC-AATAAGAGTTTGCTTGTGAGCGTCTTGTGTGTGCTGTTTCCAG
TAGTCTTTCTACTGTTCAGTTTTTTCTTCGGTCAATTTAGTT----------ACTAGTTGATCTGTGAACCAGTGTACGT
GCAACCTACATCTACCACTAGTGTGAATTTGATTCAGCTCCTATTTGTGGAGACGAAGGTTATATGCGTCCACGATGCAG
TGTGCTGGCAAGTGGCAACACAGTTGGGGGCTGAGAGAT-CGATGCATACTAGTGTTGACTGGGACTTTGGAAGCAGATT
GATAGCT----GAAGACCGTCGACATGTCTGGTAGTGGAAGGAGGAAAAG-------------ACAATGGCCATGGCCCA
GCCACTAGTA------GTAACC-----------------------------------------TACTATTTTGTCATGTG
CGTGCATGCATGTGTCGCTGCTAGCTCACTGCAGCTTATAGCTTGCAGTGTACCAGCTTGTACCCGATCCTTCAAACCTG
CTATGTAGCTAGGTTGTAACCATTATCTCTCCATCTGCTCCAAACTTTTCTGTATGACAAGACATGCATTGCTATGTATA
TGCCTCGATTGTGTGTAATATGT-------------------TAGGTTTTGCCGTATCTACTATGTGTGGGTGTT-TTTA
TAATGTTAAAATGGCT-----------GCTGATGAGAAGAGGCATCAGTTCTTGACCCCC-TTTCCCCATCATTTGGGTG
A-----CCCTTTTGGTCGATTTGGCAATATT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chrUn_1
AAGATGTTTTGAACTGCAAAAACATCTTATATTAGTGTACAGAGGTAATACAACATCTTATATTTGTGAACGGAGCGAGT
ACATAAGATCAGAAATTATCCAAATAACAGTTACAAACACCAAGCCCAACGAGGCCGTTCCAGTGGGTGTCATTGTCACT
AGGATTAAGGAGGAAACCTCGCTTTGGAGTATTGCGGGGGCGAAGCACTTGAGTAATGTAATGCCGCGAGAGTGATTATT
GTAATTCGGCCATGAGCCTTAAACCTCTAAAACTTCTCTCTTAATCAATGAAAATGGCAAATCTTTTGCCTTGTTTCAAA
AAAAAACAAGAGCGAATAGGAGCAAACTAGAGACAAGTAGAGAGGGACGCCAGTGGAGCGCACGCGCTCTGTTTTTGCAC
CCCTTTGGGCTTTGGTGTTCTCCCTGCCGCAATCACG--TTTGAGCGCAGAGTTGGAGCACCATATCTCCCTGCTCTGCA
C-----------------------------------TCACTACTGCGCTTTCTCATAATATAATTGCAATA---------
----------------------CCAGTACAGATCAACAAATAATTTTCCAAATACATATTCTTTTTACTGGATAGAATTA
AACTATATGCATGCATGCATTTTCAAGAGAGAAGAAAAAAGAAAAAAGAAGCATTTCGACAGAAATATAAATACATAGTA
CGTATTAGACTTAATGGTATAGGCCATACTCAATCATCACTAAGACAATTTTGAAAAAGGCCTTTAAGCAATTGTCAATG
CGCTCAAACAGTGTGGCTTCTAATAATGTCCTCCGGAAGGATCGATGAACTGTTTCAGGAACTTGTACTATGGTACAATT
GATCTACCTCAGCTTGGGACTTTGTAGGCGCATACATGGCAATCGGGCTTTCTTCTTTTACCAAATGTGTGGATTCTGTG
CATTAT------GAACAAACTTTTTCCAAAACCCACCTGTCACGAATATACAGACTTATGCTAGTTTTCAGGTTTGAAAC
CTTTTTAAGATGTATGCTCCAGTTTTATAGTGCGCAAGGACGGAATAATCAAACATCACCTAGTGATAATCTAGCTTTAA
AACTTCACCCTCCTCGCACACAGCTCACTCACCCCGCGGCTCTCCACGGCTATAAATAGAGCCTCTACGCCACCCAACCT
CAACACCAACCATCAGGTTATACTACCTCATTCCTCTCGTGCTTCTACTAGCTACC-TGCAAGCTGTAGATATCTGTCAT
CTATCATCACCAACTTTTCAGTTCAAGCTAGGTAGCTAGCCATGGCTAGGGTGCTGGAGCCTCTCGTCGTTGGAAAGGTC
ATCGGGGAGGTCATCGACAACTTCAACCCCACAGTGAAGATGACGGTGACCTACAGCTCCAACAAGCAGGTGTTCAACGG
CCACGAGTTCTTCCCGTCGGCAGTCGTGTCCAAGCCACGCATTGAGGTCCAGGGCGGCGACATGAGATCCTTCTTCACTC
TGGTTTGCGCCTCCTCTCC-----TCTCCGGCTATCTCATCTGTACACA--AAGCTAGCTAGTGTAACATCCAGCTGATA
ACTGAGTGTTGTC---GCTCTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTTAGGGAGCATC
TCCACTGGTAATTA--CTAGCCCAAACTAGTTTACAGTACTCGAGCAATCGAAAGCCTAA-C---GACTATAAAGA----
------------------------------------CCAATAAGCTCAGCACAACATGGAAAAATCTCTATAACGTGAAA
GACATACATATCAGTCCAAGTGAGCTACATGTTTAAGACCAAATTAATTTAGCTGGTGATCAATTAGGTTCTTTCCTATG
GACATAAAACTTATCAGTTTTTGTTTAGTGAATATAAATGGT--CAGATTTATATGATCAGCTATGCATAAAAACATGCT
TGATCAGATTGTGACT-----------TGTGTATGCAGGATCGTCAGTGATATTCCTGGCACCACAGATGCTTCTTTTGG
TAAGTCCTTTTCATGCATGACTTGCTTTATCTTTTGCTGATTGG----TCCCATCCTTAA-TTTCTCTGAAAAAACACAT
G-------AATGCATGCAGGAAGGGAGGTGGTGAGCTACGAGAGCCCCAAGCCCAACATTGGCATTCACAGGTTCACCTT
CGTGCTGTTCCAACAGAAGAAGCGGCAGGCCATGAACC------CTCCCTCCACCAGGGACTACTTCAACACGCGCCGCT
TCGCCAACGAGAACGACCTTGGCCTCCCGGTGGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCACGCCGCCGC
TGACGGAAACAATCAGCCCAACCCTTCTTCTCTTGCATGCATGGCGCATGCAACAAGCCTATGGATCAACCTATAGCT--
---ACTATTAGCTACCATCTACATATATCTCCACTCAAATAAGAGTTTGCTTGTGAGCGTCTTGTGTGTGCTGTTTCCAG
TAGTCTTTCTACTGTTCAGTTTTTTCTTCGGTCAATTTAGTT----------ACTAGTTGATCTGTGAACCAGTGTACGT
GCAATCTACATCTACCACTAGTGTGAATTTGATTCAGCTCCTATTTGTGGAGACGAAGGTTATATGCGTCCACGATGCAG
TGTGCTGGCAAGTGGCAACACAGTTGGGGGCTGAGAGGCCCGATGCATACTAGTGTTGACTGGGACTTTGGAAGCAGATT
GATAGCT----GAAGACCGTCGACATGTCTGGTAGTGGAAGGAGGAAAAG-------------ACAATGGCCATGGCCCA
GCCACTAGTACTCCCAGTAACA-----------------------------------------TACTATTTTGTCATGTG
CGTGCATGCATGTGTCGCTGCTAGCTCACTGCAGCTTATAGCTTGCAGTGTACCACCTTGTACCCGATCCTTTAAACCAG
CTATGTAGCTAGGTTGTAACCATTATCTCTCCATCTGCTCCAAACTTTTCTGTATGACAAGACATGCATTGCTATGTATA
TGCCTCGATTGTGTGTAATATGT-------------------TAGGTTTTGCCGT-------------------------
--------------------------------------------------------------------------------
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>chr4A_1107
--------------------------------------------------------------------------------
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-------------------------------GTAGGTAGCCATGGCTAGGGTCCGAAACCCTCTCGTCGTCGGAAAGGTC
ATCGGGGAGGTCATTGACAACTTCAACCCCACGGTGAATATGACGGTGACCTACAACTCCGACAAGCAGGTGTCCAATGG
CCAGGAGTTCTTGCCGTCGGCGGTCGTGTCCAAGCCACGCATTCAGGTCCCGGGCGGCGACATGAGATCTTTCTTCACTC
TGGTTTGCGCTTCCTCTCC-----TCCTTGGCCACCTGACGCGTACACACAAAGTAAGCTAGC-TAGCATCCAGCTGATA
ACCGAGTATGATTGCTGCTCTTCAGGTCATGACGGACCCGGATGTGCCAGGGCCTAGCGATCCATACCTGAGGGAGCATC
TCCACTGGTAATTGTACTAACCCAACCTAG---------CTCAGTCGATCAGAAGT-CCATC---CAGTACAAAGAAATA
TATAGTTAGCTAGATTGGAAAAAAATATCTCATGAGCCATGTATAT--------CGAATTGC------------------
----------TCAGTCCAAGTGATTGAGCAC----------AAATTAATTATCTGGTGTCCCATTAGTGGCTATCCTATG
GGCATCAAACCTGT---TTTTTGTCTAGTGAGCATAAATTGGCACAAATTTATATGATCAGCTATGCATAAGAATATGTT
TATGAATTATGAGGCTATGAGCTTTTGTGTACATGCAGGATCGTCACTGATATTCCTGGCACCACTGATGCTTCTTTTGG
TCAGTGCCC---------------------CTTTTTCTGATTGACTGACTACATCCTTATTTTTTTCTGGATAAACATGA
T------TAATGCATGCAGGGAGCGAGGTGGTGAGCTACGACAGCCCAATGCCCAACATCGGCATTCACAGGTTCATCTT
CGTGCTGTTCAAACAGAAGAAGCGGCAGGCTGTGAACCCTCGAGCTCCCTCCACCAGGGACTGCTTCAACACTCGCCGCT
TCGCCGACGAGAACGACCTCGGCCTCCCGGTCGCCGCCGTCTACTTCAACGCGCAGCGGGAGACAGCCGCGCGCCGCCGC
TGATGTGAAAAAT-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>chr4B_1112
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------TAGCCATGGCTAGGGTGCGAGACCCTCTCGTCGTCGGAAAGGTC
ATCGGGGAGGTCATTGACAACTTCAACCCCACGGTGAATATGTCGGTGACCTACAGCTCCGACAAGCAGGTGTCCAACGG
CCAGGAGTTCTTGCCGACGGCGGTCGTGTCCAAGCCACGCATTCAGGTCCCGGGTGGCGACATGAGATCTTTCTTCACTC
TGGTTTGCGCTTCCTCTCC-----TCCTTGGCCACCTGACGCGTACACA--AAGTACGCTAGC-TAGCATCCAGCTGATA
ACCGAGTAT-ATTGCTGCTCTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATC
TCCACTGGTAATTGTACTAACCCAACCTAG---------CTCAATCGGTCAGAAGT-CAA-C---CAGTACAATTA----
------------------------------------CCATGTATATATATATATCGAA-TGC------------------
----------TCACTCCAAGTGATCGAGCAC----------AAATTAATTATCTGGCGACCCATTAGTTGCTATCTCATG
GGCATCAGTCCTGT---TTTTCGTCTAGTGAGCATAAATTGTCACAAATTTATACGATCAGCTATACATAAGAATATGTT
TATC-------AGGCTATGAGCTTTTGTGTACATGCAGGATCGTCACTGATATTCCTGGCACCACTGATGCTTCTTTCGG
TCAGTGCCC---------------------TTTTTTCTGATTGG----CTACATCCTTAA-TTTGTCTGGATAAACATGC
ACTTGAATAATGCACGCAGGGAGCGAGGTGGTGAGCTATGAGAGCCCGAAGCCCACCATCGGCATTCACAGGTTCGTCTT
CGAGCTGTTCAAACAGAAGAAGCGGCAGGCTGTGAACCCTCGAGCTCCTTCCACCAGGGACTGCTTCAACACTCGCCGCT
TCGCCGACGAGAACGACCTCGGTCTCCCGGTCGCCGCCGTCTACTTCAACGCGCAGCGGGAGACAGCCGCGCGCCGCCGC
TGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr4D_1112
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------TAGCCATGGCTAGGGTGCGAAACCCTCTCGTCGTCGGAAAGGTC
ATCGGGGAGGTCATTGACAACTTCAACCCGATGGTGAATATGACGGTGACCTACAGCTCCGACAAGCAGGTGTCCAATGG
CCACGAGTTCTTGCCGTCGGCGGTCGTGTCCAAGCCACGTATTCAGGTCCCGGGCGGCGACATGAGATCTTTCTTCACTC
TGGTTTGCGCTTCCTCTCC-----TCCTTGGCCACCTGACGCGTACACA--AAGTAAGCTAGC-TAGCATACAGCTGATA
ACCGAGTATGATTGCTGCTCTTCAGGTCATGACGGACCCAGATGTGCCAGGGCCTAGTGATCCATACCTGAGGGAGCATC
TCCACTGGTAATTATACTAACCCAACCTAG---------CTCAATCGATCAGAAGTCCAA-C---CAGTACAATTA----
------------------------------------CCATGTATAT--------CGAA-TGC------------------
----------TCAGTCCAAGTGATCGAGCAC----------AAATTAATTATCTGGTGACCCATTAGTTGCATTCCTGTG
GGCATCAAACCTGTTAGTTTTTGTCTAGTGAGCATAAATTGGCACAGATTTATATGATCAGCTATGCATAAGAATATGTT
TATC-------AGGCTATGAGCTTTTGTGTATATGCAGGATCGTCACTGATATTCCTGGCACCACTGACGCTTCTTTCGG
TCAGTGCCC---------------------TTTTCTCTCATTGG----CTACATCCTTAA-TTTGTCTGGATAAACATGC
ACTTGAATAATGCATGCAGGGAGCGAGGTGGTGAGCTATGAGAGCCCGAAGCCCACCATCGGCATTCACCGGTTCGTCTT
CGTGCTGTTCAAACAGAAGAAGCGGCAGGCTGTGAACCCTCGAGCTCCTTCCACCAGGGACTGCTTCAACACTCGCCGCT
TCGCCGACGAGAACGACCTCGGCCTCCCGGTCGCTGCCGTCTACTTCAACGCGCAGCGGGAGACAGCGGCGCGCCGCCGC
TGATGTGGAAA------------------------------------ATGCTACAAGCCTATGGATCAAGTTATGGCTTA
GCTACTGGTATTAGCTATATATATATGGCTCCGTTAAAATAAGAGTTTGCTTGTG---GTCTTGTGTCCACTGTTTCTGC
TAGTCTTCCTACTGTTCAGC----TCTTCGGTTAGTTTAATTAGTTGCTCCTACTAGTCAACCTGTGAGCTTGTGTACG-
--------------CCACTAGAGTGAATTTAGTTCAACTCCTATTTTGTAC-----------------------------
----------------------------------------------------GTGTTCACTGGGACTCTGGGAGCAGAAT
GATAGCTAGCAGAAGACCGTCGACGTGTCTGGTAGTAGTAGGCTAGTGAAAGGTGGAAAAGGCACAATGGCTGTGGCCCA
CCTACCTGCGCTACTGTTGTTGCCCTCAGGGCCTATAATCTTTCTTACCCGTTTTGAACCTCGTACTATTTTCATTTCTG
TAAGGACCTCATCTTTAAGGCCGCGTCTCCGCTCTAAAAA----------------------------------------
-------------------------------------------------------------------------ATATATA
TGCCTTGCATGGTTGATCTTGATTGTCTGAGTATATAGATACTAGATCTTGCCGTATCTGTTGTGTGTGTGTGCAATTTG
TAATATTAATTGATATGGCTGGTTGTGGCTGGTGTGAAGAGGCATCAGTTCTTGGCCATCCTTTTCCCACCATTTTGGTG
TCCCGGCCCCTTTGGTCGATTTGGCAATCTTTGATCATTAGCATATATATGCGCCTACGTATGCCTTCCTTAATTAAGTT
TGTGC-ACTTTCTGGGTCAACATGCCTAGCTATAGTTTATATCCATGAAAAACTAACGTTAATATGTATGAGTCATAATA
TCTAACATGATGCATAATAGAAGATTTAACAACCTACTGGTTGTAGCAAATGGCTAACTAAGACAATCAACAAACATGGA
AG------------------GTACAAGTAGTTTCAACGGATGGTACAATTACACAAAGTAGATTGGAGTGGTTTACATAT
ATCCAACATATCATT--------------------------------------------------------
>SNPs
-----------------------------------S--------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S------------------S------------------------------------------
-----------------------------------S-SS---------------------S-------------S---S-
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------S-------S-----
----S------------------------------------------------------------------S--------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------------------------------------S--------------------------------------
-----------------------------------------------------------------S--------------
-----------------S-------------------------------------------------------S------
-----------------------------------------------------------------S--S-----------
-----------------------------S--------------------------------------------------
---------------------------------------------S-----------S----------------------
---------------S----------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------------------S-----------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------S-SS---S----
-----------------S-----------------------S-S------------------------------------
---------------------------------------------------S-------------------S-S------
--------------------------------------------------------------------------------
-------------------------------S--------------SSSSSSSSS-------------------------
-S-SSS---------S----------------SSS-------S--------SS---SS-----S-SSS--SS--------
---------SSSS-S-SSSSSSSSS-SS----S-SSSSSSSSS-S-S-------------S-------------S-----
SSSSSSSSSSSSSSSSSSSS------------SS--------SSS-------S---S-S---------------------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_485
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------TCTCCCTGCACTGAA
CTCAC---------------------------------------------------------------------------
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>reverse_1536
--------------------------------------------------------------------------------
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---------------ATCCTCTCCGGCCATCTCAT---------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CTCCCTGCACTGAA
CTCACT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2421
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CCCCTTCTTCTCTTGCATGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGTCCAAGCCACGCATTGAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_3526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTGGTAGCACGGAACGTACA-------------------------------------------------------
-----------------------------------------------------------------------
