>input_sequence_57018
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--------------ATGCCGCAGCAGCAACCACCCCTCCCGCTCCCGCCGCGCATGCGCCCGCCGACGGACCGCGAGGCT
GCCATGGCCGGCCCGCCTCCTCCGCGGCAGCGCCTGGGCCAGGCGCCGAGGCCGTTCCGCGCGGCGGAGGAGCCCACGGC
CCGCGGGCCTCCCGTCGCCGACAGGGCCAGGCCGCCGGAGCCGCGGCCCCGCCCGAGCCTCGCCGAGGACGGCCGCGCGT
CTCACGAGGCTCTCCTCGCCAACGTCGCCAGGCCGACGGGGAAGCCGGAGGGCCGCGCCGCTCGGGAGGCTCCCGTCGTC
CCCGTGGCCAAGCCGCCGGAGCAGCTTTACGCAGCGGGAGCGCCGGAGGGACGCGCGGCTCGGGAGGCTCCCGTCGTCCC
CGTGGCCAGGCAGCCGGAGAAGCTGCACGTTGCGGCGGAGGAGCGCAAGACTCCTCGGGAGGCTCCCGTCGCCCCCGTGG
CCAGGTCGCCGGAGCAGCTGTCTGGCTCGCCGGAGGGACGCGCGGCTCGGGAGGCCCCCGTTGCCACAGTGGCTAGGCCT
CCGGAGCCGCGGCCGGGGCCGTACTACGTGCCGGGGGGCGGC---GCGGCGGCTCCCGTCGCAACCACCGACAGGCCGCC
GGAGCCAAGCCCGTGGCCGTACCCGTACTACTACGAGCCGGAGCGCCCCCCGCGGCGCCGCACCTCCGCCCTGGCGTCCT
GCCTTATGGCGGCGGCCTTCCTCCTGTTCGCGGCCGGCGGGGCGGCGACGGCGCTGTTCCTCCTCTTCCGGCCGCAGCCG
CCCGAGATCGCCATCGCGGCGGTGCGGCTGCCGTCCTTTGCGGCTGCCAACGGCACGGTGGCCTTCACCTTCGAGCAGGT
GGCCTCCGTGCGCAACCCCAACCGCGCGCCGCTCGCGCACTTCGACAGCTCGCTCCGCGTCGCCTACGCCGGCGGCGAGA
TCGGCTCCATCTACATCCCCGCGGGCCTCATCGACAGCGGCAGCACCAAGCACTGGTCCACCAGCTTCGCCGTGCCGGCC
TTCCCCGCGGCCACCCCACCGCCGCTGGACATGACCGCGCAGCAGCCGGCGGCCGCGGCGGCCATGATGGAGGTGGACTC
GCTGCTGGTGGTGAAGGGCAAGGTGATGGTGCTGCGGGTGCTGACGCACCGGGTGCAGGCGTCCAAGGTGTGCCGCGTCG
GCGTCTCGCCGATCGACGGCAGGGTGCTTGGCTTCCGTTGCTGA------------------------------------
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-----------------------------------
>chr3B_1_TraesCS3B01G184600
TCCGTGCGCACTCCTCCAGAGGAAACCGTTGGCCGACATGAGGTTGGCTATGAGTTCTATAGGCCCTGGTTGAAACTTTG
TACAAGCTCCGTCGTAGTCTAGGTGGTTAGGATACTCGGCTCTCACCCGAGAGACCCGGGTTCAAGTCCTGGCGACGGAA
TTCTTTTTTTTCTTTGTTCCTCGATTAACAGGCACAGGTGTACCCAACACTAGTTTCTGCCGTGGAT----------GAT
CATCACCCCGTCATGCTCGCTGCGCGGCGAAAGCAAGCCAAAACGCCGTACTTTTTTT----CCCTTTGGCCCAGCCAGC
CAAAGCGGAACCAGCGCGGGCACGTTGCTTA--AAGGCTAAGATCTTGTAGCTTTACCCGAAAGGAAAAAAGAAGGAAAA
TAAATGAATGAAACAACAAAGTGTATCTCTTAAGCC-GAGAGCAACTAGAAAATAATCGGAAGATCAAATTAACCTACTC
CTGCTGGTCACCTACCAG-------CGCAGCAGCAGCCAATAGATAAACCCATCCTCATCCCTGTGCTGCTGTCTAGCCC
GAGCAAAGCTTCCC-GTACTGTCCATTGGCGCGGTCGTCGTCCCTTCGGTCTTGGCGCCCAGACGGAGAAGAGATCCAGG
ACATGGACGGTCAAGATTCGCCCGTCGACTTTCCGGGCGGTTTCACACCACGCCAGAGAT----CACACAGAGGTCGGTC
ACTCACATGCGTGAACACTGGTGAGCGGTAACGTACAGCAGCAGCTGGATCTCATCTCA--------TCC---AGGAGGA
GAAGTCTCCAAAGTCGAAAAGCACCTCCACCTCCACTCCCACTTACTGCGCGCAGCAGCTCACTACACTACCCCCAAGTA
CCCAGCCCAGTCCCCA-CCCCCGTCTTTC-----CGCTCGGGCGCGCACATGCCACCCAACAACATTGTTCAGCATTATT
GTGCCGTGCCCTCGCAAAGCGGCGCAAGCGAACAAAGGGCGAGCGAGGGCGCCACGCGCACACTCCACTA--------GC
GAGGGAGGAGTACGATGCCGCAGCAGCAACCACCCCTCCCGCTCCCGCCGCGCATGCGCCCGCCGACGGACCGCGAGGCT
GCCATGGCCGGCCCGCCTCCTCCGCGGCAGCGCCTGGGCCAGGCGCCGAGGCCGTTCCGCGCGGCGGAGGAGCCCACGGC
CCGCGGGCCTCCCGTCGCCGACAGGGCCAGGCCGCCGGAGCCGCGGCCCCGCCCGAGCCTCGCCGAGGACGGCCGCGCGT
CTCACGAGGCTCTCCTCGCCAACGTCGCCAGGCCGACGGGGAAGCCGGAGGGCCGCGCCGCTCGGGAGGCTCCCGTCGTC
CCCGTGGCCAAGCCGCCGGAGCAGCTTTACGCAGCGGGAGCGCCGGAGGGACGCGCGGCTCGGGAGGCTCCCGTCGTCCC
CGTGGCCAGGCAGCCGGAGAAGCTGCACGTTGCGGCGGAGGAGCGCAAGACTCCTCGGGAGGCTCCCGTCGCCCCCGTGG
CCAGGTCGCCGGAGCAGCTGTCTGGCTCGCCGGAGGGACGCGCGGCTCGGGAGGCCCCCGTTGCCACAGTGGCTAGGCCT
CCGGAGCCGCGGCCGGGGCCGTACTACGTGCCGGGGGGCGGC---GCGGCGGCTCCCGTCGCAACCACCGACAGGCCGCC
GGAGCCAAGCCCGTGGCCGTACCCGTACTACTACGAGCCGGAGCGCCCCCCGCGGCGCCGCACCTCCGCCCTGGCGTCCT
GCCTTATGGCGGCGGCCTTCCTCCTGTTCGCGGCCGGCGGGGCGGCGACGGCGCTGTTCCTCCTCTTCCGGCCGCAGCCG
CCCGAGATCGCCATCGCGGCGGTGCGGCTGCCGTCCTTTGCGGCTGCCAACGGCACGGTGGCCTTCACCTTCGAGCAGGT
GGCCTCCGTGCGCAACCCCAACCGCGCGCCGCTCGCGCACTTCGACAGCTCGCTCCGCGTCGCCTACGCCGGCGGCGAGA
TCGGCTCCATCTACATCCCCGCGGGCCTCATCGACAGCGGCAGCACCAAGCACTGGTCCACCAGCTTCGCCGTGCCGGCC
TTCCCCGCGGCCACCCCACCGCCGCTGGACATGACCGCGCAGCAGCCGGCGGCCGCGGCGGCCATGATGGAGGTGGACTC
GCTGCTGGTGGTGAAGGGCAAGGTGATGGTGCTGCGGGTGCTGACGCACCGGGTGCAGGCGTCCAAGGTGTGCCGCGTCG
GCGTCTCGCCGATCGACGGCAGGGTGCTTGGCTTCCGTTGCTGAGCCGCA--GCCAAGTTC------GGGGTCGGGGGTT
GAACTGTAAGAAATTAATCAAGGCAGGATTTTACAGTAAAC-AAGGCAATTTCAACTAGAATCGTGCG------------
---CTAGAATCATGTGGATTTCCCGTGTCAAAACATTTCACCGAAC-AAATTTGGTAAATTGGAAATGAATTTGACATAG
CCTGTTCTCCAGTAGCATGTTGAACAAATTTCATCG-----AAATCATTTCCATTTACGGTATGTTGCCACTACAGATCT
TACATGTTGAGCTCACAAAAAGAAGACCAATTACTATGTCGGTCGAATCTACACCTCTAATAGAATAGTTCATGGTATGT
TCGGCTCCAAGATTTCATGGAGAACTCATGGATCAGGATCAGATCTATACTAATAGTACTACACAACGGGTTTACTGTTT
GCTCCTCTTGTTTGGGAAAAACATAAGGCGGCTAAAAAGGTAATCTCGCTTGAATAGGCAGATGCGGGATAAGCTGTAGA
AGCATCTGTTGACATAGAATTCTCGGCGTCATAGTGAAGGATGTCGAGCTTCACTCGGTCACCATATCTTGTTCTTGATC
CAAAAGAGCATCAGTACTATCCCCATCACAATGGCCACAGGGGCATACTTCCGAATCAAGGCCTGAAAAACCACAAGTGG
CAATTGCGTCAGATTAATAAGAAAAAGTATGGTGGCCAGTGTTGACTAGAGATCCCCATTCTGCTTTGTTAATGCACATA
GGACTGCAAGATACAGAATGGAATTTGTGTGCTTCACGAACAGAAGTCACGGAAATATTACTAAGCACTAATGAGCAGTT
TGTGGCAGATTACAACGGGACCAAAGTTACTTTTTTACTGCACATTGTTTATTTGTTTGGAGTCAGGATTACAGACAACA
AAATTTGTTGGAAGTAGCCAATCAAACTAAAATCGAAAGCACGAGGGAAAGTTTGTGGAAGTATGCCGCTTGCAGCTGCT
CAACTGTCATGTGCTATTCTACATAAAACTGTGA-
>chr3A_84
--------------------------------------------------------------------------------
---AAGCTCTGTCATAGTCTAGGTGGTTAGGATACTCAGCTCTCACCCGAGAGACCCGGGTTCAAGTCCCGGCGACGCAA
TCCTTTTTATAAC-------------AACAAGCACAGGTGTACCCAACACTGCTTTCTGCCGTGGAT----------GAT
CATCA-CCCGTCCTGCTCGCTCCGCGGCCAAAGCAAGCCAAAACGCCGTACTTTTTTTTTCTCCCTTTGGCCCAGCGAGC
CAAAGCGGAACCAGCGCGGGCACGTTGCTTATAAAGGCTAAGATCTTGTAGCTTTACCCAAAAGGAAA------GGAAAA
TAGATAAATGAAACAACAAAGTGTATCTCTTAAGCCGGAGAGCAACTAGAAAATAGTCGAGAGATCAAATTAAACTACTC
CTGCTGGCCACCTACCGG-------CG-AGCAGCAGCTGATAGA-AAACTCAAACTCATCCCTCTGCTGCTGTCTAGCCC
AAGCA-AGCTTCCC-GTACTGTCCATTGGCGTGGTCGTC---CCTTCAGTCTTGGTGCCCAGACGGAGACGAGATCCAGG
ACATGGACGGCCAAGATTCGCCCATCGACTTTCGGGGTGGTTTCACACCACGCCAGAGAT----CACACAGAGGTCGGTC
ACTCACATGCGTGAACACTGGCGAGCGGTAACGTACAGCAGCAGCTGGATCTCATCTCAATATCTCATCCGGGAGGAGGA
GAAGTCTCCAAAGTCGAAAAGCACCTCCACTTCC----------ACTGCGCGCAGCTCACTATA----------------
-----CCCAGTCCCCA-CCCCCCGTCTTTCCGCTCGCTGGGGCGCGCACATGCCACCCAACAGCATTGTTGAGCATTATT
GTGCCGTGCCCTCGCAAAGCGGCGCAAGCCAACAAAGGGCGAGCGAGGGCGCCACGCGCACACTCCACTAGCGAGCGAGC
GAGGGAGGAGTACGATGCCGCAGCAGCAACCACCCCTCCCGCTCCCGCCGCGCATGCGCCCGCCGACGGACCGCGAGGCT
GCCGCGGCCGGCCCGCCTCCTCCGCGGCAGCGCCTGGGCCAGGCGCCGAGGCCGTTCCGCGCGGCGGAGGAGCCCACGGC
CCGCGGGCCTCCCGTCGCCGACAGGGCCAGGCCGCCGGAGCCGCGGCCCCGCCCGAGACTCGCGGAGGAGGGCCGCGCGT
CTCACGAGGCTCTCCTCGCCAACGTCGCCAGGCCGGCGGGGAAGCCGGAGGGCCGCGCCGCTCGGGAGGCTCCCATCGTC
CCCGTGGCCAAGCCGCTGGAGCAGCTTCACG------GAGCGCCGGAGGGCCGCGCGGCCCGGGAGGCTCCCGTCGTCCT
CGTGGCCAGGCAGCCGGAGAAGCTGCACGTTGCGGCGGAGGAGCGCAAGACTCCTCGGGAGGCTCCCGTCGCCCCCGTGG
CCAGGTCGCCGGAGCAGCTGTATGGCTCGCCGGAGGGACGCGCGGCTCGGGAGGCCCCCGTCGCCACCGTGGCTAGGCCT
CCGGAGCCGCGGCCGGGGCCGTACTACGTGCCGGGGGGCGGCGCGGCGGCGGCTCCCGTCGCAACCACCGACAGGCCGCC
GGAGCCGAGCCCGTGGCCGTACCCGTACTACTACGAGCCAGAGCGCCCCCCGCGGCGCCGCACCTCCGCCGTGGCGTCCT
GCCTTATGGCGGCGGCCTTCCTCCTGTTCGCGGCCGGCGGGGCAGCGACGGCGCTGTTCCTCCTCTTCCGGCCGCAGCCG
CCCGAGATCGCCGTCGCGGCGGTGCGGCTGCCGTCCTTCGCGGCCGCCAACGGCACGGTGGCCTTCACGTTCGAGCAGGT
GGCCTCCGTGCGCAACCCCAACCGCGCGCCGCTCGCGCACTTCGACAGCTCGCTCCGCGTCGCCTACGCCGGCGGCGAGA
TCGGCTCCATCTACATCCCCGCGGGCCTCATCGACAGCGGCAGCACCAAGCACTGGTCCACCACCTTCGCCGTGCCGGCC
TTCCCCGCGGCCACCCCGCCGCCGCTGGACACGTCCGCGCAGCAGCCGGCGGCTGCGGCTGTCATGATGGAGGTGGACTC
GCTGCTGGTGGTGAAGGGCAAGGTGATGGTGCTGCGGGTGCTGACGCACCGGGTGCAGGCGTCCAAGGTGTGCCGCGTCG
GCGTCTCGCCGATCGACGGCAGGGTGCTTGGCTTCCGGTGCTGACCCGCACAGCCACTGCTAGCTCGGGGTTTGGGGGTT
CAACTGTAAGAAATTATT-AAGGCAGGATTTTACAGGAAACAAAGGCAATTTCAACTAGAATCATCCGAAATTGCC----
-AACTAGAATCGTGTGAATTTTCCGTGTCAAAACATTTCACCGAAC-AAGTTTGGTAAATTGGAAATGAAGTTGGCATGG
CCTGTTCTTCAGTAGCATGTCAAACATATTTCATCTCGACCAAAGCATTTCTGCATACAATATGTTG-CACGACAGATCT
TACATGTTGGGCTCACAAAAAGAAGACCAATTACTATGTCGGTCGAATCTACAACTCTAATAGAATAGTTCATGGTATGT
TCGGCTCCAAGATTTCATGGAGAACTCATGGATCAGGATCAGATCTATACTAATACTACTACACAACGGGTTTACTGTTT
GCTCCTCTTGTTTGGGACAAT-ATAAGGCGGCTAAAAAGGTAATCTCGCTTGAATAGGCGGATGCGGGATAAGCTGTAGA
AGCATCTGTTGACATAGAATTCTCGGCGTCATAGTGAAGGATGTCGAGCTTCACTGGGTCACCATATCTTGTTCTTGATC
CAAAAGAGCATCAGTACTATCCCCATCACAATGGCCACAGGGGCATACTTCCGAATTAAGGCCTGAAAAACCACAAGTGG
CAATTGCGTCAGATTAATAAGAAAAAGTATGGTGGCTAGTGTTGACTAGAGATTCCCATTCTGCTTTGTTAATGAACATA
GGACTGC-AGATACAGAATGGAAT--GTGTGCTTCACGAACAGAAGGCGCGGAGATATTAC-------------------
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-----------------------------------
>chr3D_121
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----------------------------------------TCTCACCCGAGAGACCCGGGTTCAAGTCCCGGCGACGGAA
ATCTC--TTTTTTTTAGTCCTCGATTAACAGGCACAGGTGTACCCAACACTAGTTTCTGCCGTGGAGGATCGACATCGAT
CATCACCCCGTCCTGCTCGCTGCGCGGCCAAAGCACGCCAAAAGGCCGTGCTTTTTTTTTCCCT-TTTGGCGCGGCGAGC
CAAAGCGGAACCAGCGCGGGCACGTTGCTTA--AAGGCTAAGATCTTGTAGCTTTGCCCAAAGGGAAA------GGAAAA
TAGATAAATGAAACAACAAAGTGTGTCTCTTAAGCCGGAGAGCAACTAGAAAGTAATGGAGAGATCAAATTAACCTACTC
CTGCTGGCCACCTACCGGCTACCGGCGCAGCAGCAGCTGATAGATAAACTCAAACTCATCCCTCTGCTGCTGTCTAGCCC
GAGCAAAGCTTCCCAGTACTGTCCATTGGCGTGGTCGTCGTCCCTTTCGTCTTGGCGCTCAGACGGAGAAGAGATCCAGG
ACATGGACGGTCAAGATTCGTCGGTCGACTTTCGGGGCGGTTTCACACAGCGCCAGAGATCACACACACAGAGGTCGGTC
ACTCACATGCGTGAACACTGGTGAGCGGTAACGTACAGCAGCAGCTGGATCTCATCTCA--------TCCGGGAGGAGGA
GAAGTCTCCAAAGTCGAAAAGCACCTCCACTTCCCACTTCCGGGAGGAGAAGTCT-------------------------
------CCAGTCCCCACCCCCCGTCTTTC-----CGCTCGGGCGCGCACATGCCACCCAACAGCATTGTTCAGCATTATT
GTGCCGTGCCCTCGCAAAGCGGCGCAAGCGAACAAAGGGCGAGCGAGGGCGCCACGCGCACACTCCACTA--------GC
GAGCGAGGAGTACGATGCCGCAGCAGCAACCACCCCTCCCGCTCCCGCCGCGCATGCGCCCGCCGACGGACCGCGAGGCT
GCCGCGGCCGGGCCGCCTCCCCCACGGCAGCGCCTGGGCCAGGCGCCGAGGCCGTTCCGCGCGGCGGAGGAGCCCGCGGC
CCGCGGGCCTCCCGTCGCCGACAGGGCCAGGCCGCCGGAGCCGCGGCCCCGCCCCAGCCTCGCGGAGGAGGCCCGCGCGT
CTCACGAGGCTCTCCTCGCCAACGTCGCCAGGACGGCCGGGAAGCCGGAGGGCCGCGCCGCTCGGGAGGCTCCCGTCGTC
CCCGTGGCCAAGCCGCCGGAGCAGCTTCACG------GAGCGCCGGAGGGACGCGCGGCTCGGGAGGCTCCCGTCGCCCC
CGTGGCCAGGCCGCCGGAGAAGCTGCACGTTGCGGCGGAGGAGCGCAAGACTCCTCGGGAGGCTCCCGTCGCCCCCGTGG
CCAGGTCGCCGGAGCAGCTGTATGGCTCGCCGGAGGGACGCGCGGCTCGGGAGGCCCCCGTCGCCACAGTGGCCAGGCCT
CCGGAGCCGCGGCCGGGGCCGTACTACGTGCCGGGGGGCGGCGCGGCGGCGGCTCCCGTCGCAACCACGGACAGGCCGCC
GGAGACGAGCCCGTGGCCGTACCCGTACTACTACGAACCGGAGCGCCCCCCGCGGCGCCGCACCTCCGCCCTGGCGTCCT
GCCTTATGGCGGCGGCCTTCCTCCTGTTCGCGGCCGGCGGGGCCGCGACGGCGCTGTTCCTCCTCTTCCGGCCGCAGCCG
CCGGAGATCGCCGTCGCGGCGGTGCGGCTGCCGTCCTTCGCGGCTGCCAACGGCACGGTGGCCTTCACGTTCGAGCAGGT
GGCCTCCGTGCGCAACCCCAACCGCGCGCCGCTCGCGCACTTCGACAGCTCGCTCCGCGTCGCCTACGCCGGCGGCGAGA
TCGGCTCCATCTACATCCCCGCGGGCCTCATCGACAGCGGCAGCACCAAGCACTGGTCCACCACCTTCGCCGTGCCGGCC
TTCCCCGCGGCCACCCCGCCGCCGCTGGACACGACCGCGCAGCAGCCGGCGGCCGCGGCTGCCATGATGGAGGTGGACTC
GCTGCTGGTGGTGAAGGGCAAGGTGATGGTGCTGCGGGTGCTGACGCACCGGGTGCAGGCGTCCAAGGTGTGCCGCGTCG
GCGTCTCGCCTATCGACGGCAGGGTGCTTGGCTTCCGGTGCTGACCCGCA--GCCTCTACTAGCTCGGGGTTTGGGGGTT
CAACTGTAAGAAATTATT-AAGGCAGGATTTTACAGGAAACAA--GCAATTTCAACTAGAATCGTGTGAATTTTCCGTGT
CAACTAGAATCGTGTGAATTTTCCGTGTCAAAACGTTTCACCGAACAAAATTTGGTAAATTGGAAATGAAGTTGGCATGG
CCTGTTCTTCAGTAGCATGTTGAACATATTTCATCTCGACCAAAGCATTTCTGCATACAATATGTTG-CACGACAGATCT
TACATGTTGGGCTCACAAAATGAAGACCAATTACTATGTCGGTCGAATCCACACCTCTAATAGAATAGTTCATGGTATGT
TCGGCTCCAAGATTTCATGGAGAACTCATGGATCAGGATCAGATCTATACTAAT---ACTACACAACGGGTTTACTGTTT
GCTCCTCTTGTTTGGGAAAAACATAAGGCGGCTAAAAAGGTAATCTCGCTTGAATAGGCAGATGCGGGATAAGCTGTAGA
AGCATCTGTTGACATAGAATTCTCGGCGTCATAGTGAAGGATGTCGAGCTTCACTCGGTCACCATATCTTGTTCTTGACC
CAAAAGAGCATCAGTACTATCCCCATCACAATGGCCACAGGGGCATACTTCCGAATTAAGGCCTGAAAAACCACAAGTGG
CAATTGCGTCAGATTAATAAGAAAAAGTATGGTGGCTAGTGTTGACTAGAGATTCCCATTCTGCTTTGTTAATGCACATA
GGACTGCAAGATACAGAATGGAATTTGTGTGCTTCACGAACAGAAGTCACGGAAATATTACTAAGCACTAATGAGCAGTT
TGTGGCAGATCACAACGGGACCGAGTTAGTTTTA-TAGTGCACATTTTTTATTTGTTTCAAGTGAGGATTACACC-----
---------GGAAGTAGCCAATCAGACTAAAATCGAAAGCACAAGGGAAATGGCAATAAGTATGCTCGCTTGCAGCTGCT
CAACTGTCATGTGCTTTTCTACAAAAAAACTGTGA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS------S---S-----------------------S-------------------------------S----------
-----------S---SS---------------------------------------------------------------
------------S---------------S-----------------------------------------------S---
-----------------------------------------------------------S--------SSSSSS------
--S--S-----------------------------------------------------SS-------------------
-------S--------S--------------------SS----------S--SS---------S----------------
-------------------------------S---------------S--------------------------------
---------------------------------S----------------------------------------------
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------------------------------S---SSSSS-SSSS------------SSSSS-SSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------------S-----------------
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---SS---------------------------------------------------------------------------
---------------------------------------------------------------S-----S----------
-----------------------------------S--------------------------------------------
---------------------------S---SSSSSS-------------------------------------------
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---------------------S---------------------------------------S------------------
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------S-------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------------S-------------------------S-----------------------------S-----------
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---------------------------------------------------------------S----------------
-----------------S-------------S---------------------------S--------------------
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-------------------------------------S------S-----------SSSSS---------S-S-------
S---------------S-S-----------------S-------------------------------------------
-----------S----S----S------------------------------------------------S---S---S-
--------S-----------------S--------S--------S------SSSS---SS-------S---S--------
---------S----------------------------------------------------------------------
-------------------------------------------------------S------------------------
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--------------------------------------------------------S-----------------------
------------------------------------S----------------S--------------------------
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----------S-----------S-SS-SSS---SS--S--------S-----------SS---S---------SSSSSSS
SSSSSSSSS---------------S-----------------S-------SSSSSSSS-SSSSSSS--------------
---------------S-------S----SSSSSS-
>forward_835
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---------------GAAAAGCACCTCCACCTCCA---------------------------------------------
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>reverse_2140
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-----------------------------------------------------------GGCCATGATGGAGGTGGAC--
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>forward_870
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--------------------------------------------------CGCAGCAGCTCACTACACTA----------
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>reverse_2311
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----------------------------------------------------------------------GTCGGGGGTT
GAACTGTAAGA---------------------------------------------------------------------
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-----------------------------------
