>input_sequence_57005
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--ATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGACGACGGCGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCGTCCCGTGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGCTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCCTAGTCGGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTGCCATGCACTGGCAAAAGTACCGTATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTATGATTTTTTCTACTCCCTCCGTCCCAT
AATATAAGATCGTTTTTTACACTAGTGTAGTGTAAAAAATGCTCTTCTATTATGGGACGGAGGGAGTATATAATAATAAC
ATTGCTGGAGACAGGCATGCGTTTTTGTGATGCAAGCATTGCTCTCTGCTTGGTTACTTGCACCATTCAAGGGGATGTAC
TCTTCCATGTTATCAACTTAATACTGAT----------------------------------------------------
--------ACTTGTTCTGTATCTGGCACAGATAATATGTGTTTGATCTAAGTTTCAGCTTGGGACATCCATTATCAGAAT
TGATGTATTTACTGTTCATATCTTTTGCATGTTTAAATTGTGACCTCATCAATTACCGATCATGACCTGCTCGTGTGTTT
GCACTATGCAGTTCCCGGTGGGCCGTATACACAGGCAGCTCAAGCAGAGGGTCTCGGCTAATGGCCGTGTGGGTGCCACT
GCCGCTGTGTACTCTGCAGCAATCCTTGAGTACCTCACTGCCGAGGTCCTTGAGCTGGCCGGCAACGCCAGCAAGGATCT
CAAGGTGAAGCGTATCACCCCTCGCCACCTGCAGCTCGCGATCCGTGGAGACGAGGAGCTGGACACCCTCATCAAGGGCA
CCATCGCTGGTGGTGGTGTCATCCCTCACATCCACAAGTCCCTCATCAACAAGACCTCCAAGGAGTGA------------
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----------------------------------------------
>chr7D_1_TraesCS7D01G246600
TTTCGTGTATACTCCACAAATAATGCTTCTGCCCGTTGGGCTGCTTTCATCTCAGGGAGGTATGTCCGAGTGAAATACAC
AATTATGAATCCTAGTCTACCTCCACTCGTGTAGCATGTCCCGGTTGATCAAACCCCAACATGCAGGATGATATATTTGT
ACTCGATGAAGGGGTTTGTAAACATCAAATTTATCTTCCGTCTCATGTGAAACATTGTTGTAACATATTTCTTGCGGTGA
GTAATTTAAGTTTTTCGACAAAGATTATCGTATACTACAATTTAAGCACGCTCACTGCTATTTCCATGCTGCATTAAGGG
CCCCCGGCCTGCGAAATATAGTATACCATATATTTTTAGGTTAGTTTACCTTTTTTTTGAGAGATTATGTTAGTTTACCT
TTTTTTTTACGGTTGATTATGTTAGTTTACCTGCCTTTTTTTTAGAAACACCTGCCGTAAGTTTTTTTTTTGAGAAACAG
CTGCCGTAAGTTGTTTGGTGGTTAAAATCGTAGCCCAACCGAAAGAAACGCGGTCAGGTCCATGGTGGTTTGAAAGCCCA
TATGTGTTGAGCGG-AAATAGACAGCAGCTTCGAGTAATATCGCGCCAGCGCAAAACGCTCCGCAGTTTCCCGCTTCCTT
TTTTTTAG-------TTTTTTCACACTGCCGCCAATTGTTTTGTCAGTCCCACCGCGCGCGTAGTTCAAACCCCCCCAAA
ACACCAGCGCGCCAGAAATTTCGCCGGTTTCCCTCCCAACTCCCCCCTCCCGCCC-CCCCGCGCCGCCTCCCCACCA---
CACTCGAAATAAATACAGGGAGCAAAACCGCTGAATAGCCCGAAGAGGAGAGAAGCACCCAAGCCCCAGTCAGTTCTAA-
--------------GACC---------------GAGAGAGGCGAGAGGAAGCCAGGTGAGGCAGGGGATCCCCGGCGTTG
TAGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGCTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGACGACGGCGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCGTCCCGTGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGCTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCCTAGTCGGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTGCCATGCACTGGCAAAAGTACCGTATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTATGATTTTTTCTACTCCCTCCGTCCCAT
AATATAAGATCGTTTTTTACACTAGTGTAGTGTAAAAAATGCTCTTCTATTATGGGACGGAGGGAGTATATAATAATAAC
ATTGCTGGAGACAGGCATGCGTTTTTGTGATGCAAGCATTGCTCTCTGCTTGGTTACTTGCACCATTCAAGGGGATGTAC
TCTTCCATGTTATCAACTTAATACTGAT----------------------------------------------------
--------ACTTGTTCTGTATCTGGCACAGATAATATGTGTTTGATCTAAGTTTCAGCTTGGGACATCCATTATCAGAAT
TGATGTATTTACTGTTCATATCTTTTGCATGTTTAAATTGTGACCTCATCAATTACCGATCATGACCTGCTCGTGTGTTT
GCACTATGCAGTTCCCGGTGGGCCGTATACACAGGCAGCTCAAGCAGAGGGTCTCGGCTAATGGCCGTGTGGGTGCCACT
GCCGCTGTGTACTCTGCAGCAATCCTTGAGTACCTCACTGCCGAGGTCCTTGAGCTGGCCGGCAACGCCAGCAAGGATCT
CAAGGTGAAGCGTATCACCCCTCGCCACCTGCAGCTCGCGATCCGTGGAGACGAGGAGCTGGACACCCTCATCAAGGGCA
CCATCGCTGGTGGTGGTGTCATCCCTCACATCCACAAGTCCCTCATCAACAAGACCTCCAAGGAGTGAATGAAACGCAAT
AACGGGTAGTTGTGCT---TTGTATCTTCGTGATCCCTTGTTATGTTGTGCTATCTGTGATGTGTTGCTATTATCACAAC
CTGAATAGGTTGTCTGAATTTGTGATGGGGCTAGCTTTCGGTAACTTGTTATTAGGGAAAGACTTGGCAAATGTAATCGT
GATATGGAACCACTTATATTTGGTTTCCTGAAGACCAGACAATCCTTACTATTCGTCTTCATGGATATCCAGGTTTAACT
TTCTTTTATTTTTGTTGGTTTCGCTCAAGATCACTGCAACTGGAGTGCCTGCCGGCTGGACGCTTTGTTAGATTATGTTT
ATGTATAGTTTCTCTTGTCAAG---------------AGCAAAATGGATGTTGAAACTTATTTGTGCTCATCTCTTGTGC
ATTCATAATCTGCTCCACACATCCTGTTGACCGTACCTGGCAGAGTGGTGATACGGGGCTAACCTAGTGTAGGCTGATCT
TTCACGATTGGAGTGGGTTCCCTTGAAGAACACAATGAACACGGGGAAGAACGGAGAGAAATCACAAGGGGGAACACTCA
AGAACAAGTTCAATCACACATCCACTAAACAATTAAACACACAAGATCCACAAGGTACATGAACAACAAAGGGAAAGATA
CAGGTAAGGTTCATCTCCATGAGGATCTAACTAGGAGGAGGTGGGGGTCTATATATAGTGTTAGCCCACGAAGGGGTAAG
TGAGAGGGGGGATACATGGGCCCTTGGCCCGTTCTCTGCGCACAGGCAGGTGTCGGATGTCCGGGCTGGGGGTGTTTTGT
GATGGGCGCCGGATTTCCGGGCTGGTCCGGATGTCCGGGGCCTGTAGCAGCTGGCTCTTCTTCCTTCTCCTTCCTTCGCT
CCCGCGCACACTTGGCCTTGGTCCTTGGGCTCTCCATGGTCTCCTCGGGTGTACCTGAGTATGCACAAGGTCCGCGCTTG
AAGTAGCATCCATGTCTTACATGCGGAAAGGGAAGATTCGGAAAGG
>chr1B_465
TTTTTTTAGAAACACTG---------------------------------------------------------------
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----CGTAAGTTCTTTGGTGGTTAAAATCGTGGCCCAACCGAAAGAAACATGGTCAGGTCCATGGTGGTTTGAAAGCCCA
TATGTGTTGAGCGGAAAATAGACAGCAGCTTCCAGTAATATCGGGCCAGCGCAAAACGCTCCGCAGTTTCCCGCTTCCTT
TTTTTTTAAAAAAACTTTTTTCACACTGCCGCCAATTGTTTTGTCAGTCCCACCGCGCGCGTAGTTCAAACCCCCCAAAA
ACATCAGCGCGCCAGAAATTTCGCCGGTTTCCCTCCCAACTCCCCCCTACCGCCCCCCACGCCCCGCCTCCCCACCCCAC
CACTCGAAATAAATACAGATAGCAAAACCGCTGAATAGCGCAAAGAGGAGAGAAGCACCCAAGCCCAAGTCAGTTCTAAG
CCTTGTAGCTGCTCGACC---------------TAGAGAGGAGAGAGGAAGTCAGGTGAGGCAGCGGATCCCCGGCGGTG
TAGCTTGAAACCTCTTTTGCTTGCTTGGTTTTGCTGATGGTTTCGGTGGGTGTGCAGGTAGGAGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGACGACGGCGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCCTCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTCTCCTCTCTCTCTCTCTCTCTCTCTGATTT---------------------------------TAATCGATAGTT
CTTATTGT-GTCCCGCTCTACCCGCGCCGGGATTTAGGTTTGCCGGCTCCCCAATTCCCCCTCTTTCCTCTCTCTCTCTC
TCTCTGATGTTAATCTCTAAGCGTTTCCTGCCGCGGATCTAGTGCCATGTTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCCGTTGTCTGTATTGATTATCGATTTGCATGAGTAATGATTATCGGTTAGCCGGTTCTTTTAGG
CTGTCTCCCCCATCTTAGTCGTGGTTTATTTGTTCTATTGTAAACTATGTCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGTAGGCTTCATTACCATGCACTGGCAAAAGCCCTATATTTTATTGATCTA---ACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACCGTACTATTGTGTGATCCGTTTACGATTTTTTCTA---------------
--------------------------------------------------------------------TATATTAATAAC
ATTGCCGGAGATAGGCATGTGTTTTTGTGATGCAAGCATTGCTGTCTACTTGGTTACTTGTGCCATTCGAGGGAATGCAC
TCTTCCATGTTATCAACTTACTACTGATGCTGCAGGATTCAGCATCATGAGCGCTCAATCTCACTTGTTCTGTGTTTCTA
GATCATTCACTTGTTCTGTATTTGGCACAGCTAATAT----------ATAGTTTCAGCTTGGGATATCCATTATCAGAAC
TGATGTCTTTACTGTTCATAT-GTTTGCATGTTTAAATTATGACCTCGTCAATGGCTGATCATGACCTGCTCGTGTGTTT
GCACCATGCAGTTCCCGGTGGGCCGTATACACAGGCAGCTCAAGCAGAGGGTCTCGGCTAATGGCCGTGTGGGTGCCACT
GCCGCTGTGTACTCTGCAGCAATCCTTGAGTACCTTACTGCTGAGGTCCTTGAGCTGGCCGGCAACGCCAGCAAGGATCT
CAAGGTGAAGCGTATCACCCCTCGCCACCTGCAGCTTGCGATCCGTGGAGATGAGGAGCTGGACACCCTCATCAAGGGCA
CCATCGCTGGTGGTGGTGTCATCCCTCACATCCACAAGTCCCTCATCAACAAGACCTCCAAGGAGTGAATGAAATGCAAT
AACGGGTAGTTGTTGTGCGTTGTATCTTCGTGATCCCCTGTTATGTTGTGCTATCTGTTATGTGTTGCTATTATCACAAC
CTGAATAGGTTGTCTGAATTTGTGATGGGGCTAGCTTTCGGTAACTTGTTATTAGGTAAAGACTTGGCAAATGTAATCGT
GATATGGAACTGCTCATATTTGGTTTCTTGAAGACTAGACAATCCTTACTATTCGTGTTCATGGATAT-------TAACT
T--TTTTATTTTTGTTGGTTTCACTCGAGATCACTGCAACTGGTCTGCCTGCTGGCTGGATGCTTCGTTAGATTATGTGT
ATG----GTTTCTCTTGTCAAG---------------AACAAA-------------------------------------
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>chr1A_519
CCGTAAGA------------------------------------------------------------------------
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---------------------------------------------AAACGTGGTCAGGTCCATGGTGGTTTGGAAGCCCA
TATGTGTTGAGCGG-AAATAGACAGCAGCTTCCAGTAACATCGGGCCAGCGCAAAACGCTCCGCAGTTTCCCGCTTCCTT
TTTTT-AG-------TTTTTTCACACTGCCGCCAATTGTTTTGTCAGTCCCACCGCGCGCGTAGTTCAAACCCCCCAAAA
ACATCAGCGCGCCAGAAATTTCGACGGTTTCCCTCCCAACTCCCCCCTCCCGCCC-CCCCGCCCCGCCTCCCCACCA---
CTG--GAAATAAATACAGGGAGCAAAACCGCTGAATAGCGCAAAGAGGAGAGAAGCACCCAAGCCCCAGTCAGTTCTCA-
--------------GCCCTGTAGCTGCTCCACAGAGAGAGGCGAGAGGAAGCCAGGTGGGGCAGGGGATCCCCGACGGTG
TAGCTTGAAATATCTTTTGCTTGCTTGGTTTTGCTGATGGTTTCGGTGGTCGTGCAGGTAGGAGGCTCTGCTGCAAAGGG
AGATGGCCGGGAAAGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGACGACGGCGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCCGTGTCCCGCTCCTCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTCTCTCTGTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAATCGATAGTT
CTATTCTCCGGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCTAAGTGTTTCCTGCCGCTGATCTGGTGCCATGTTGCACCTTTTGTTTGTACGAGATTTGTTGT
AGAATCTTATTGCGTTCTGTTGTCAGTATTGATTATCGATTTGTATGAGTAATGATTATCGGTTAGCTGGTTTGTTTAGG
ATGTCTCCCCCATCTTAGTCGTAGTTTAGCTGTTCTATTGTAAACTATGTCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTTCCATATTTTATTGATCTA---ACTTGTAGCT
GTACCTTTTGAATCCTACCCACACTTGTACCGTACTATTGAGGGATCCGTTTACGATTTTTTCTA---------------
--------------------------------------------------------------------TATAATTATAAC
ATTGTTGGAGATAGTCACGTGTTTTTGTGATGCAAGCATTGCTGTCTACTTGGTTACTTGAATCATTTGAGGGGATGTAC
TCTTCCATGTTATCAATTTAATACTGATGCTGCAGGATTCAGCATCATGCACCCTCAATCTCACTTGTTCTGTGTTTTTA
GACCATTCACTTGCTCTGTATCTGGCACACATACTATATTTTTGATCATAGTTTCAGCTTGGGACATCCATTATCAGAAT
TGATATCTTTACTGTTAATAT-TTCTGCATGTTTAAATTATGACCTCATCAATCGCCGATCATGACATGCTTGTGTGTTT
GCACTATGCAGTTCCCGGTGGGACGTATACACAGGCAGCTCAAGCAGAGGGTCTCGGCTAATGGCCGTGTGGGTGCCACT
GCTGCTGTGTACTCTGCAGCAATCCTTGAGTACCTTACTGCCGAGGTCCTTGAGCTGGCCGGCAACGCTAGCAAGGATCT
CAAGGTGAAGCGTATCACCCCTCGCCACCTGCAGCTTGCGATCCGTGGAGATGAGGAGCTGGACACCCTCATCAAGGGCA
CCATCGCTGGTGGTGGTGTCATCCCTCACATCCACAAGTCACTCATCAACAAGACCTCCAAGGAGTGAATGAAATGCAAT
AACGGGTAGTTGTTGTGTGTTGTATCTTCGTGATCCCTTGTTATGTTGTGCTATCTGTTACGTGTTGCTATTATCACAAC
CTGAATAGGTTGTCTGAATTTGTGATTGGGCTAGCTTTCGGTAACTTGTTATTAGGTAAAGACTTGGCAAATGTAATCGT
GATATGGAACTGCTCATATTTGGTTTCCTGAAGACTAGACAACCCTTGCTATTCGTCTTCATGGATATTCAGGTTTAACT
T--TTTTATTTTTGTTGGTTTCGCTTGAGATCACTGCAACTGGACTGCCTGCTGGCTGGACGTTTTGTTAGATTATGTTT
ATGTATAGTTTCTCTTGTGAAGAACAGATTCTTTGACAGCAAAATGGATGTTGAAACTTATTTGTTCTCATCTCTTGTGC
ATTCATAATCTGCTCCACACATCCTGTTGACCGTACCTGGCAGAGTGGT-------------------------------
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>chr5B_827
CCC-----------------------------------------------------------------------------
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------------------------------------------AAGAGGAGAGAAGCACCCAAGCCCCAGTCAATTCTAA-
--------------GACC---------------AAGAGAGGCGATAGGAAGCCAGGTGAGGCATGGGATCCCCGGCGTTG
TCACTTGAAATCTCTTTTTCTTGCTTGGTTTTGCTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCAAAGGG
AGATGGCCGGGAAGGAAGGGAGGGAAGGGAGGCAAGGGGCCTCTAAA---------------------------------
-AAGGAAAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTTGTCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTAT-GGACCGTTCTCGCAGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCTGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTGGTTGT
AGAATCTTATTGTGTTCTGTTCTCAGTATTGATTGTCGATTTGT---AGTAATGATTATCAGTTAGATGGTTTGTTTAGG
TTGTCTCCCCCATCTTAGTCGGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCGTATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTATGATTTTTTCTA---------------
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>chr7B_862
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-------------------------------------------------------------------------TTGTAA-
--------------GACC---------------AAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCGGCGTTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGTTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCAGCGAAGATGACGGTGGCCAAGGGCGCCGCCGA
CAAGGACAAGGGCAAGAAGAAGGCGCCTATGTCCCGCTCATCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCCGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTAGTTCGTTTAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCATATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTACGGTTTTTTCTA---------------
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>chr5B_862
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTGTAA-
--------------GACC---------------TAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCAGCGTTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGTGGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCAGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGACGACGGTGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCTCCTGTGTCCCGCTCATCCCGCGCCGGGATTCAGGTTTGGCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAGTCTTATTGTGTTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATTATTATCGGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTCGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCATATTTTATCGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTACGGTTTTTTCTA---------------
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----------------------------------------------
>chr1B_862
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTGTAA-
--------------GACC---------------AAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCGGCGTTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGTTGATGGTTTCATTGGGTGTGCATGCAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGTGAAGACGACGGTGGCCAAGGGCGCCGTCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCATCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCTAATTCCC
CCACTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGTGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAAGCTTATTGTGTTCCATTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCAGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCATATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCATTTACGGTTTTTTCTA---------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr3B_865
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TAA-
--------------GACC---------------AAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCGGCATTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGTTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGGAGG-------------CACGGGGCTGCTTGCGGCGAAGATGATGGTGGCCAAGGGGGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCATCCCATGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCTTAGTCGGAGTTTGTTTGTTATGTTGTAAACCATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCATATTTTATTGATCTATTAACTTGTACCT
GTACCTTTTGAATTCTACCTACACTTGTACTGTACTATTGTGGGTTCCGTTTACGATTTTTTCTA---------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr2B_865
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TAA-
--------------TACC---------------AAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCAGCGTTG
TCACTTGAAATCTCTTTTGCTTGCTTGGTTTTGTTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGATGACGGTGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCATCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCGTATAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGACCAAAGTCCCATATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTACGGTTTTTTCTA---------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr2B_865
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TAA-
--------------TACC---------------AAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGCATCCCCGGTGTTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGTTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGAGAAGGGAGG-------------CAAGGGGCTGCTTGCGGCGAAGACGACGGTGGCAAAGGGCGCCGCAGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCATCCCGCGCCGGGATTCAGGTTTGCCCACTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTGCCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCCGTTGTCAGTATTGATTATCGCTTTGT---AGTAATGATTATCGGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCATATTTTATTGATCTACTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTACGGTTTTTTCTA---------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr2B_865
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------TAA-
--------------GACC---------------AAGAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCAGCGTTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTCTTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTACGAAGGG
AGATGGCCAGGAAGGGAGG-------------CAATGGGCTGCTTGCGGCGAAGACGACGGTGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCATCCCGCGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGTGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTACCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACAAGATTTGTTGT
AGAATCTTATTGTGTTCCGTTGTCAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCGTTTAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATAGTGATTGCAGGCTTCAGTACCATGCACTGGCAAAAGTCCCATATTTTATTAATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTATTGTACTATTGTGGGATCCGTTTATGGTTTTTTCTA---------------
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>chr1B_865
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----------------------------------------------------------------------------TAA-
--------------GACC---------------AAGAGAGGCGAGAGGTAGCCAGGTGAGGCATGGGATCCCTGGCGTTG
TTGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGTTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCAAAGGG
AGATGGCCGGGAAGGGAGG-------------CAAGGGGCTGCTTGCGGGGAAGACGACAGTGGCCAAGGGCGCCGCCGA
CAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCATCCCGTGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTTCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTTGCGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCCTACCGCGGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCC-----CAGTATTGATTATCGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCATTTAGG
TTGTCTCCCCCATCTTAGTCAGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATACTGATTGCAGGCTTCAGTACCATGCACTGGCCAAAGTCCCATATTTTATTGATCTATTAACTTGTAGCT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCTGTTTACGGTTTTTTCTA---------------
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----------------------------------------------
>chr4B_865
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----------------------------------------------------------------------------TAA-
--------------GACC-----------------GAGAGGCGAGAGGAAGCCAGGTGAGGCATGGGATCCCCAGCGTTG
TCGCTTGAAATCTCTTTTGCTTGCTTGGTTTTGCTGATGGTTTCGTTGGGTGTGCATGTAGGGGGCTCTGCTGCGAAGGG
AGATGGCCGGGAAGGAAGG-------------CAAGGGGCTGCTTGCGGCGAAGACAACAACGGCCAAGGGCGCCGCCGA
GAAGGACAAGGACAAGAAGAAGGCGCCTGTGTCCCGCTCGTCCCGTGCCGGGATTCAGGTTTGCCCGCTCCCCAATTCCC
CCTCTTGCCTGTAGCTA---------------------------------------------------------------
--TTTTGT-GGACCGTTCTCGTGGGTGAATTGTTAG--------------------------------------------
------------ATCTCCAAGTGTTTCTTGCCGCAGATCTGGTGCCATGCTGCACCTTATGTTTGTACGAGATTTGTTGT
AGAATCTTATTGTGTTCTGTTGTCAGTATTGATTATTGATTTGT---AGTAATGATTATCGGTTAGCTGGTTCATTTAGG
TTGTCTCACCCATATTAGTCGGAGTTTGTTTGTTATGTTGTAAACTATGCCAGATCTATGTTTTGCACTCCTGCAATGTT
ATGACAGTATATTGATTGCAGGCTTCAATACCAAGCACTGGCAAAAGTCCCGTATTTTATTGATCTATTAACTTGTAGTT
GTACCTTTTGAATTCTACCCACACTTGTACTGTACTATTGTGGGATCCGTTTACGATTTTTTCTA---------------
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>SNPs
---SS--SSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS--------S------------------S------------------S-----------------------------
--------------------------------S----------S------------------------------------
----------------------------------------------------------------------------S---
---S----------------------------------------------------------S-----------------
---------------------------------------S-S--------------------------------------
--------------------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------S------------------S-------------------------------
-----------------------------------------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------
-----------S-------S-----------------------S---S------------S-------S-----------
--------------------------------------------------------------------------------
-------------------------------------S-S-------SS-------------------------------
------S--------------S-----------------S-------------SS-------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------------------S--------------S----------------------------
--------------------------------------------------------------------------S-----
-------------SS-------------------------------------------S---------------------
--------------------------------------------------------S-----------------------
----------SS--S--------------------S--------------------------------S-----------
-SS-----------------------S-----------------S-------S---------------------------
-----------------------------------------------------------------S--------------
-------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_56
------------------------------------TGGGCTGCTTTCATCTCAGG------------------------
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>reverse_2276
--------------------------------------------------------------------------------
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-----------------------------------CACTGCCGAGGTCCTTGAG--------------------------
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----------------------------------------------
>forward_342
--------------------------------------------------------------------------------
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--CCCGGCCTGCGAAATATAGT----------------------------------------------------------
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----------------------------------------------
>reverse_2475
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CGCAAT
AACGGGTAGTTGTGC-----------------------------------------------------------------
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----------------------------------------------
