>input_sequence_56988
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------------------------------------------------------ATGGTGATTCTGCGCTCTCACAGGTA
GGCGGC----GCGGCGACCGGCCGGAAAAGGAAGCACCACCAGTTCGATCTGCTTACTTTGACGT-------TTTGACCA
TCTTCTTGGTTGTT-CATCGGTGTAATTTTCCAAG--CAGGGACACGGAGACGGCGGAGATGGCGCAGCAGCTGCGGGAC
AGCCCTGACCTGGCTGGTTTCGAGTTCTACAAGCTCATGGCTTCCGGAACGTCCTGGGAGAAGCTGGTGATTACTTGCAC
ATG----------CTCTCCTAGCTAGCTAGTTCATTAAGCACGAGCGAGTTCGTCTCTCTCCCATCTCTC----TGCTTA
CTG--------TTTCTTGCCGCCCGGCTGAACTGCAGCCGCTGCCTGACAAGTTCGTGAGGGAGCTCAACGGCCGTGCGC
TCCGGGACGTGAAGCTGCGGGTCGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGGTCGTCGCCAACGAGTACGGCCAC
ATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATACAGCTGGGGCAGCTCCTCGTCTTCTGCTACGA
CGGCGCCG------CCCTGCTCACCGTCACGGTGTTCGAGGACTCCGAGTGCGGGAGACACTGCTGCCAGCGCGAGGAGG
AAGACGACAGCGCCGGTACGTTCCCTTCCCTTGTA---TCTTCTCTTGCAGTATATG-----TCCTGGAACTGACAGTGC
GCGGTTGAGTTAAACAGAA---GAGGACGAGTCTCCGCCACCGGCGTTGCCAGGGAGTGAAAGCAGCA---GCAACGACG
ACGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGGGGCAGTGTCACCTGGGCACCAAGAAG
AAGCAGTACCTGGTGAGCCGTGGCTGTAAATT---AACGTGCGCCCCTCA-----TCGCATCTTTGGTTTGTAACAACTG
TTTGCCGTGTCGTTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGGTTCACGGAGAAGGGCAGGGTGGTGCT
GCGGATGCGTGGGCAGCAGTGGAGCGTCTGCCTCAAGCACAGCAACCGGCGGAAGGGCAACGCCAGGACCCGCACGGCGC
TGAGGTACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCACGTCGGCGACATCTGCTTCTTCCAGCTGGTGCATGAT
GCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACCATCGTCCAGTGA--------------
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>chr3B_1_TraesCS3B01G438800
CACATGAAAATTGCAAGCTCTCAAACAAAAGTCAAAACCTGAACCTGAAGTGAATAGTCCCATGTTGTTCTGT-------
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--------------------------------------------------------------TCACAGTGAAACTTATCC
TTCTGTTCCTTGAATTGTGTGTTGAATTTTGACCTATAACTGTGTGACATGGTATATAC----------------ATGCT
GTATGAGTGTAGTTCATTTTTCTTAAAAAAGATATTTTCAAGGCGCTTTGAGTGCTGAACTAAGGGTCTG--------GT
ACACCTCAAAGGTGGTAGTGTA----------------------------------------------------------
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----------------------------------------------------------------------------CCCC
ATATCCCTCCAGCCTCCAGGGCAGCCAGGGTTGGGCATTTACCAGCATCTTTAACCTGTTTCTTCTTCAGTTATTCTGGT
TTGGCTCTGCGTAGAGAAAATGATGACCCCTAAACAGATACTCCCTCCGTCCAAAAATACTTGTCCTCGAAATGGTTGTA
TCTAGACTTATTTTAGTTATAGATATATTCATTTTATTCATTTTGAGGACAAGTATTTCCGGACGGAGGGAGTACTTACG
TATCAAATATAATTAATTTCTCGGCAAGCAGCCTTAGATCACAGAAAATATCCAGGTACGTACACCACGAAACATGCTCG
GGGAAGAGTAGCTGTAGCCTGTAGGCGTCAAGACGCTCGCACGCATTGAAAGATGAGAAACCACCAAGCGCTTGGCCCGC
ACAC-----AACCGAGCATG-CATGCATAGAGCCATGTGAGCTCCAAAGGCTACAGCACACAGGCCGCGCAGCTTGACGC
TCTTTCGGTGTTCGCTGCCAGTAAAGCGAAGCCCATCTTGTGTGTGTCCTGTGTGCCGCTCCTTGCTAAGAAGTGGCAAA
CGAGACGTACGTGATGGCTGTGTATGCGTTGGTGCTGCGCAGTTACATCGATCCCAGCGTTTTATTTACAAGAGATTCCT
CGCCTCCTCCTCCCCTCC--TCCCATCCCACTCCATCACAAGATTCGCAGCCTCCTCCTC---------CTCCCATCAGT
----------GAGAGTGAGACTGAGACCAGCCAGTGGCCTCGCCCGTGTGCTCCATGGTGATTCTGCGCTCTCACAGGTA
GGCGGC----GCGGCGACCGGCCGGAAAAGGAAGCACCACCAGTTCGATCTGCTTACTTTGACGT-------TTTGACCA
TCTTCTTGGTTGTT-CATCGGTGTAATTTTCCAAG--CAGGGACACGGAGACGGCGGAGATGGCGCAGCAGCTGCGGGAC
AGCCCTGACCTGGCTGGTTTCGAGTTCTACAAGCTCATGGCTTCCGGAACGTCCTGGGAGAAGCTGGTGATTACTTGCAC
ATG----------CTCTCCTAGCTAGCTAGTTCATTAAGCACGAGCGAGTTCGTCTCTCTCCCATCTCTC----TGCTTA
CTG--------TTTCTTGCCGCCCGGCTGAACTGCAGCCGCTGCCTGACAAGTTCGTGAGGGAGCTCAACGGCCGTGCGC
TCCGGGACGTGAAGCTGCGGGTCGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGGTCGTCGCCAACGAGTACGGCCAC
ATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATACAGCTGGGGCAGCTCCTCGTCTTCTGCTACGA
CGGCGCCG------CCCTGCTCACCGTCACGGTGTTCGAGGACTCCGAGTGCGGGAGACACTGCTGCCAGCGCGAGGAGG
AAGACGACAGCGCCGGTACGTTCCCTTCCCTTGTA---TCTTCTCTTGCAGTATATG-----TCCTGGAACTGACAGTGC
GCGGTTGAGTTAAACAGAA---GAGGACGAGTCTCCGCCACCGGCGTTGCCAGGGAGTGAAAGCAGCA---GCAACGACG
ACGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGGGGCAGTGTCACCTGGGCACCAAGAAG
AAGCAGTACCTGGTGAGCCGTGGCTGTAAATT---AACGTGCGCCCCTCA-----TCGCATCTTTGGTTTGTAACAACTG
TTTGCCGTGTCGTTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGGTTCACGGAGAAGGGCAGGGTGGTGCT
GCGGATGCGTGGGCAGCAGTGGAGCGTCTGCCTCAAGCACAGCAACCGGCGGAAGGGCAACGCCAGGACCCGCACGGCGC
TGAGGTACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCACGTCGGCGACATCTGCTTCTTCCAGCTGGTGCATGAT
GCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACCATCGTCCAGTGACTA-----CTGGTT
CGTGTTAATTTGTGC------CTTGATGTGATGGCAAATAAGCAAGGAATTGA-TGTATGATGAACCACGATCTGGTTGT
TGGATGAATGAACTGCTTTTATTGTTTATTACTAGCTAGTATATATAATCTGCGATGAGCTGCTAACCATCAAGGAAAAA
AAAGATCCGCTTGACCTAGGCAACCGACCAAGCGCCACCCAACTATGA--------------------------------
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-------------------------------------------------------------------------ACAGATG
AACAAATCATGGGAGATGGGAGGGATCCAAACAATAGAAACGTTAGTTAATTATTACAGGACTGAGGCTAACGGATCACC
CAA-----------------------------------------------------------------------------
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------------------------------------------------------------TCGATACACAAGAATACAGC
TCGAACGTTTACTGCTACCAGCGACCAAAGTTCAGACGACCCAACTCTTGTTTCTCCGTCCGTGCCAAAAACCCTACACA
GTTAATCAGAGTCCTATCTACACTCGCTCAATTGGCCTCCGAGGTTGCCGATGCTGGTGGCACATCTTGCTGCTCATCAC
AAGTTGCATGAGGCTGTGCATTTCCTCCC-TGTGCCTGGTTGACAGCATCGCCTTCTGGAACTGAACGCATATATTCTGT
TTAAGCAAATCCAGTGCTACCGTGAAGCGACCC-----------------------------------------------
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-----------------------CTATGAGCTACTACATGCTACCTGATGACCATGGAG---------------------
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------------------------------------------------------------------------AAACCTTA
TTATCGCTAACTGACAAAAACAAAAAGGTGCAATGCAAAAAAAAAAATGCTGGAAGTAAGCAACTCATATACTCTGTTTA
AGCAAATCCGGTTCTACCGTGAAGCAACTCCT------------------------------------------------
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---------------------------------ATGAGCTACTACATGCTACATGATGACCAGGGAG-AACCTTATTATC
GCTAATAATCATAAACTCGTTTGGCACCTTCGGGGCATGTAACATGCGATACTTATTGCAAATATTGTTTGTCATCCTGA
AAAAAAAATTACAAAATGCATGCTAATTTTTCATTTCCTCAGCTAAAACTATTGTGTCATATGCCAACTAAATGTAGGGA
ATAGAAATTTTAAGAAACTAGATGATACCCCGCGCGTTGCTGCGGG
>chr3A_15
--------------AAGCTCTCAAACAAAAGTCAAAACCTGAACCTGAAGTGAATAGTCCCATGTTGTTCTGTTCAGAGC
ATCTCCAACAGGCGCCCAAAAAGAGCTCCGCGCACTAAAAATTTATTTTTTTGGTGCCGAATAGCTCCAGGAGACGTTGT
AGCGCTAAAAGATATAGGGTGCGCGCTGAAAAATGCTATCGCGCGCAACATATTTTGGGCTTTGAATTGCGCGCACTTCA
CAATTTGCACAGTCTGCTTTTTGAGCGTGCGTTTTTGGGCACCTGTTAAAGCAATGTTGGTCCCGGCGCATTAAAAATGC
TACAGTGTCGCGCTAAAACTTTTATTAGGCGCGAATTTTTTGTGCGGGCGTTGGAGATGCTCTCACAGTGAAACTTATCC
TTCTGTTCCTTGAGC--TGTGTTGAATTTTGATCTTGGACTGTGCGACATGGTATATAGTACACGTTGTATAAGTATGGT
GTATGAGCGTG----ATTTTTCTTAATAAATATCTTTTCAAGGCGCTTTGAGTGCTGAACTAAGGGTTTAGTGTACCAGT
ACACCTCAAAGGTGGTAGTGTACAACAGTTCCTTTTCCAACAACGGCCCCTGCAAAACTAGGATCGCACGAGGCGATCTA
GTGAGGCGACGAGGGTTCCCTGCGCGCCGCCGGTGATGCCGCCGGTTCCCTCTCTTTCCGTCGGCCGCTCCGGTGGCGGG
AGGGAGGGGAAACCTCGGGTCTGTTCGCTAGGCGGGTGTGTGTGGTAGGGTTAGGGTTGAGGGAGACCCTACCGAGGTCG
TTGCGGTGGTGTAGCGTCGGAATAAGTTTCTCCGGGCTCCGTTCGCGGTCAGGCGAGGCTTTTGCCTTCGTCTAGGAGCC
AGCGGGGTTGGGGATCCCCGGATCTCGTCGAGGTCGTGGGCTATGGTGGCTGGAGGTCCATCGGCAATGGCCGTTTGGGT
CCTTAGATGGGCGATGGATGCAGGGAGACGAAGACCCTTCTTCTTCCTTGTTGGTGGGAGATCCTGCTTTGCCCGGGCGG
ATGGCCCGGCCGCGGTGCTGGACTGGTCGGATGACTCGAGTTCTCTTCCTTCCGGAAGGGACACTTTTCGCGGTACTCAA
AGCCAAAGATGGCGATGGCTGTTGCAGGTGTGTTGGATTGATGTCCATGCTCTCTCAGCGCTGGTGTCAAAAAAGAAGGA
AGCAGCGTGGCGGCAATTGTACCGAGGTCGAAGATGATGACCTGCTTGCGATTGGTTGCAGATCCTTCTGCTGCAGGGGT
CTTCTCTTAAGATTCAGGGATGATGACCTGCTTGCGATTGGTTGCAGATCCTTCTGCTGCAGGGGTCTTCTCTTAAGATT
CAGGGATGATGACCTGCTTGCGATTGGTTGCAGATCCTTCTGCTGCAGGGGTCTTCTCTTAAGATTCAGGGATGATGACA
CAGGGCTCCGGAGATCTTCTTGCGTTATGGTTGTCTTAGGGTACTCTAGGTGTTCATGGTCCTTTGTGTTTGGATTTCAG
TGTGCTGGTAAGGATCAACTACTTTGTACTGATTCGTGATGTAAATGATAAAATTCTAAAAAAAAGTGGTAGTTTACCCC
ATATCCCTCCATGGCAGCCAG------GGGTTGGGCATTTACCAGCATCTT-AACCTGTTTCTTCTTCAGTTACTCTGGT
TTGGCTCTGCGTAGAGAAAGTGATGACCCATAAACAGATACTTACAC---------------------------------
--------------------------------------------------------------------------------
-ATCAAATATAATTACTTCCTCGGTAAGCAGCCTTAGAACACGGAAAATATCCAGTTACGTACACCACGAT-AATGCGCG
GGGAAGAGTAGCTGTAGGCGTGTAG----AAGAGAGTGTAGCCTGTAGGCGTCT---AAACCACCAAGCGCTTGGCCCGC
ACACGACACAACCGAGCATG-CATGGATAGAGCCATGTGAGCTCCAAAGGCTACAGCACACACGCCGCGCAGCTTGACGC
CCTTTCGGTGTTCGCTGCCAGTAAAGCGAGGCCCATCTCGTGTGTGTCCTGCGTGCCGCTTCTTGCTAAGAAGTGGCAAA
CGAGACGTACGTGATGGGTGCGTATGTGTTGGTGCTGCGCAGTTACATCGATCCCAGCGTT----CTACAAGAGATTCCT
CGCCTCCTCC-------------CACCCCACTCCAGCACAAGATTCCAG-------CCTCCTCCTCCTCCTCCCACCAGT
----------GAGAGTGAGACTTAGACCAGCCGGTGGCCTCGCCC--GTGCTCCATGGTGATCCTGCGCTCTCACAGGTA
GGCGGCCGGTGCGGCGACCGG------AAGGGAGCACCACCGGCTCGATCTGCTTGCTTTGACGTGTCGACTTTCGGCCG
TCTTCTTGGCTGTTTCACCGGTCTGATTTTCCGAGCACAGGGACACGGAGACGGCGGAGATGGCGCAGGG---------C
AGCCCGGACCTGGCTGGTTTCCGGTTCTACAAGCTCATGGCTGCCGGAATGTCCTGGGAGAAGCTGGTACTTAGTTCCGC
ATG----------CTCTGCTAGCTAGT----TCACCAAGCA----CGAGCTCGTCTCTCTCTCATCTCTCTGCTTGCTTA
CTG--------TTTCTTGCCGCCCGTCTGAACTGCAGGTGCTGCCTGACAAGTTCGTGAGCGAGCTCAGCGGCCTTGAGC
TCCGGGGCGTGAAGCTGCGGGTCGACGGCGGAGGGGCGCGCGCGTGGGACGTGGAGGTCGTCGCCAACGAGCACGGCGAC
ATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATAGAGCTGGGGCAGCTCCTCGTCTTCTGCTACGA
CGGCGC------CGCCCTGCTCACCGTCAAGGTGTTCGACGACTCCGAGTGCGGGAGACACTGCTGCCAGCGCGAGGAGG
AAGACGACAGCGCCGGTACGTTCCCTTCCCTTGTAGTATCTTCCCTTGCAGTATATAT-ATATCCTGGAACTGACAGTGC
GCGGGTGAGTTGAGCAGAA---GAGGAGGAGTCTCCGCCACCGGCGTTGCCAGGGAGTGGAAGCAGCAGCAGCGACGGCG
TCGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGGGGCAGTGCCACCTGGGCACCAAGAAG
AAGCAGTACCTGGTGAGCCGTGGCTGTAACCTGTAAACGTGCGCCCCTCC-----CCGCATCTTTGGTTTCTGACTGTT-
-------TGCCGGTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGGTTCACGGAGAAGGGCAGGGTGGTGCT
GCGGATGCGCGGGCAGCAGTGGAGCGTCTGCCTCAAGCACAGCAACCGGCGGAAGGGCAACGCCAGGACCCGCACGGCGC
TGAGGTACGGGTGGAACCAGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACATCTGCTTCTTCCAGCTGCTGCAGGAC
GCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACCATCGTCCAGTGACTAGACTACTGATT
CGGGTTAATTTGTGCCTTGAGCTTGATGTGATGGCAAATAAGCAAGGAATGGACTGTATGATGAACCACGATCTGGATGT
TGGATGAATGAACTGCTTTTATTATTTATTATA--CTAGTATATATAATCTGCGATGAGCTGCTAACCATCGAGGAAACA
AAAACCA--CTTGACCTAGGCAACCCACCAAGCGCCACCCAACTATGAACGAGTAATGTTAGACCTAGGTAAGGTTAGTA
AATATTTTCTGTAAAAGGGAACGTGGTGAGGTGGGATTGGATGGATAGATGCAGCAAGGGCCCACCCCGTTAAAATCAGT
GGGCCAGAGAGTGTTAGGAAGCTTTCGTAAATCTTCGTAGTGTGTTATATAGATGTAGGATTATCGAGTATGGACAGATG
AACAAATCATGGGAGATGGCAGTGATCCAAACAATAGAAACGATAGTCGCACG----AGGACTCAGGATAACAGATAACC
CGGTGGCTAAATTTCGTGTTTTGACCCCTTTTTGAAACTTGATCAAGATTCGACCCTGCCTTGCAAAAATTTTGGGATCT
TATTATTTTCTTACCGCCAGGGTCCATGGCGGCAGGGTATAACAGCCTACCGCCAAGGTCCCTGACGGTAGGGTTGCACG
TCCAACCGAAAAATCTTCTAAGTATGAAACATAGTGCATGCTCGCACCTATTGCCGGGCACCTTGGCGGTAGAGTTGTAC
AGGCTACCGCCAGCCTGCTCAGTGGTAGGGGTGTTTTCTATCGCCATAGACCCTGGCGGTAGCAAAAGGGTCAGATCCCG
AAATTTCGTGTTTTGACCCTTTTTTGAAACTTGATCGAGATCTGACCCTGGCTTGCAAAATTTTTGGGATCTTACCCTTT
TCTTACCGCCAGGGTCCATGGCGGTAGGGTATAACAGTCTACCGCCAAGGTCTCTGACGGTAGGGTTGCACGCCCAATCG
AAAAATCTTCCTAAGTATAAAACATAGTGCATGCTCGCACCTATCGCCGAGCACCTTGGCGGTAGAGTTGTGCAGGCTAC
CGCCAGCCTATTCAGCGGTAGGGGTGTTTCTTACCACCATAGACCCTGACGGTAACAAAAAGGTCAGATCCCGAAATTTT
TACAAACTGGGGTCAGATCTCGATTAACTTTCTCGAAACACGGAATTTTGCCTCACCCAGTCGATACACAAGAATACAAC
TCGAACGTTTACTGCTA------ACCAAAGTTCAGACGACCCAACT--TGTTTCTTCGTCGGTGCCAAAAACACTATACA
ACTAATCAGAGTCCTATCTACACTCACTCAACTGGCCTGCGAGGTTGCCAATGCTGGTGGCACATCTTGCTGCTCATCGC
CAGTTGCATGAGGCTGTGCATTTCCTCCA-TGTGCCTGGTTGACATCGTCGCCTTCTGGAACAGAACCAT----------
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>chr3D_523
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-----------------------------AGCCTTATCACACAAAAAATATCCAGTTATGTACACCACG-AAAATGCGCG
GGGAAGAGTAGCTGTAGGCGTGATG----AAGACGCTCGCACGCATTGAAAGATGAGAAACCACCAAGCGCTTGGCCCGC
ACACAACACAACCGAGCATGCCATGCATAGAGCCATGTGAGCTCCAAAGGCTACAGCACACACGCCGCGCAGCTTGACGC
CCTTTTGGTGTTCTCTGCCAGTAAAGCGAAGCCCATCTTGTGTGTCCCCTGTGTGCCGCTTCTTGCTAAGAAGTGGCAAA
TGAGACGTACGTGATGGGTGCGTATGTGTTGGTGCTGCGCAGTTACATCGATCCCAACGTT----TTACAAGAGATTCCT
CGCCTCCTCCTCTCCTCC--TCCCATCCCACTCCATCACAAGATTCC------------CCGCCTCCTCCTCCCATCAGT
GAGCGAGAGCGAGAGTGAGACTGAGACCAGCCGGTGGCCTCGCCC--GTGCTCCATGGTGATTCTGCGCTCTCACAGGTA
GGCGGT----GCGGCGACCGG------AAGGGAGCACCACCGGTTCGATCTGCTTACTTTGACGTGTCGACTTTCGGCCG
TCTTCTTGGCTGTTTCATCGGTCTGATTTTCCAAG--CAGGGACACGGAGACGGCGGAGATGGCGCAGGG---GCAGGGC
AGCCCGGACCTGGTTGGTTTCCAGTTCTACAAGCTCATGGCTGCCGGAATGTCCTGGGAGAAGCTGGTAATTACTCGCGC
ATT----------CTCTCCTAGCTAGC----GCACCAAGCA----CGAGCTCGTCCCTCTCTCATCTCTC----TGCTTG
CTTACTGTTTCTTTCTTGGCGCCCGGCTGAACTGCAGGTGCTGCCTGACAAGTTCGTGAGGGGGCTCAACGGCCGCGAGC
TCCGGGGCGTGAAGCTGCGGGTGGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGGTCGTCGTCAACGAGTGCGGCGAC
ATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCGTAGAGCTGGGGCAGCTCCTCGTCTTCTGCTACGA
CGGCGCCGGCGCCGCCCTGCTCACCGTCAAGGTGTTCGACGACTCCGAGTGCGGGAGACACTGCAGCCAGCGCGAGGAGG
AAAACGACAGCGCCGGTACGTTCCCTTCCCTTGTA---TCTCCCCTTGCAGTATATA-----TCCTGGAAGTGACAGTGC
GCGGGTGAGTTGAGCAGAA---GAGG---AGTCCCCGCCACCGGCGTTGCCAGGGAGTGGAAGCAGCAGCAGCGACGGCG
TCGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGGGGCAGTGCCACCTGGGCACCAAGAAG
AAGCAGTACCTGGTGAGCTTTGGCTGTAAATT---AACGTGCGCCCCTCCTCTCCTCGCATCTTTGGTTTCTGACAACTG
TTTGCCGTGCCGATTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGGTTCACGGAGAAGGGCAGGGTGGTGCT
GCGGATGCGCGGGCAGCAGTGGACCGTCTGCCTCAAGCACAGCAACCGGCGCAAGGGCAACGCGAGGACCCGCACGGCGC
TGAGGTACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACATCTGCTTCTTCCAGCTGGTGCAGGAC
GCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACCATCGTCCAGTGAC--GACTACTGGTT
CGTGTTAATTTGTGCCTTGAGCTTGATGTGATGGCAAATAAGCAAGGAATGGATTGTATGATGAACCACGATCTGGATGT
TGGATGAATGAACTGCTTTTATTATTTAGTATTAGTAGTAC--TATAATCTGCG--------------------------
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-------------------------------CTGGCCTCCGAGGTTGCCGATGCTGGTGGCACATCTTGCTGCTCATGGC
CAGTTGCATGAGGCTGTGCATTTCCTCCCTTGTTCCTGGTTGACAGCATCGCCTTCTGGAACTGAACCAT----------
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>chr3B_535
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-----------------------------------------CAGAAAATATCCTGATACACAT-----G-AAAATGCGCG
GGGAAGAGTAGCTGTAGCCTGTAGGCGTCAAG--GCGCGCACGCATTGAAAGATGAGAAACCACCAAGCGCTTGGCCCGC
ACACAACGACGCAGCGGA-G-CATGCATAGAGCCATGTGAGCTCCAAAGGCTACAGCACACACGCCGCGCAGCTCGACGC
CCTTTTGGTGTTCGCTGCCAGTAAAGCGAAGCCCATCTTGTGTGTGTCCTGTGCGCCGCTTCTTGCTAAGAAGTGGCAAA
CGAGACGTACGTGATGGCTGTGTATGTGTTGGTGCTGCGCAGTTACATCGATCCCAGCGTTTTATTTACAAGAGATTCCT
CGCCTCCTCCTCTCCTCCGATCCCATCCCACTCCATCACAAGATTCGCATCCTCCTCCTCCTCCTCCTCCTCCCATCAGT
----------GAGAGTGAGACTGAGACCAGCCGGTGGCCTCGTCC--GCGCTCCATGGTGATTCTGCGCTCTCACAGGTA
GGCGGT----GCGGCGACCGG------AAGGGAGCACCACCAGTTCGGTCTGCTTACTTTGACGT-------TTCGACCA
TCTTCTTGGTTGTT-CATCGGTGTAATTT---------------------------------------------------
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>chr3B_1118
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-----------------------TAATTTTCCAAG--CAGGGACACAGAGACGGCGGAGATGGCGCAGCAGCTGCGGGAC
AGCCCTGACCTGGCTGGTTTCCAGTTCTACAAGCTCATGGCTGCCGGAACGTCCTGGGAGAAGCTGGTGATTACTTGCAC
ATGCATGACTGTGCTCTCCTAGCTAGT----TCATTAAGCA----CGAGCTCGTCTCTCTCCCGTCTCTC----TGCTTA
CTG--------TTTCTTGCCGCCCGTCTGAACTGCAGGTGCTGCCTGACAAGTTCGTGAGGGAGCTCAACGGCCGAGCGC
TCCGGGACGTGAAGCTGCGGGTCGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGGTCGTCGCCAACGAGTGCGGCGAC
ATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATACAGCTGGGGCAGCTCCTCGTCTTCTGCTACGA
CGGCGCCG------CCCTGCTCATCGTCACGGTGTTCGAGGACTCCGAGTGCGGGAGACACTGCTGCCAGCGCGAGGAGG
AAAATGACAGCGCTGGTACGTTCCCTTGC--------ATCCTCCCTTGCAGTATATATTATATCCTGAAGCTGACAGTGC
GCAGGTGAGTTAAACAGAAGAGGAGG---AGTCTCCGCCACCGGCGTTGCCAGGGAGTGGAAGCA---GCAGCGACGGCG
ACGTCCATGGCGGCGGAGGCGGCGCCGTGCCGAGTCGGTTCACCGTGACGCTGGGGCAGTGCCACCTGGGCACCAAGAAG
AAGCAGTACCTGGTGAGCTGTGGCAGTA-------AACGTGCGCCCCTCC-----TCGCATCTTTGGTTTCTAACAACTG
TTTGCCGTGTCGTTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGGTTCACGGAGAAGGGCAGGGTGGTGCT
GCGGATGCGCGGGCAGCAGTGGACCGTCTGCCTCAAGCACAGCAACCGGCGCAAGGGTAACGCGAGGACCCGCACGGCGC
TGAGATACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACATCTGCTTCTTCCAGCTGGTGCATGAT
GCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGAACCATCGTCCAGTGAC--GACTACTGGTT
CGTGTTAATTTGTGCCTTGA------TGTGATGGCAAATAAGCAAGGAATTGATTGTATGATGAACCACGATCTGGATGT
TGGATGAATGAACTGCTTTTATTATTTA----------------------------------------------------
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>chr5A_2772
GACAAAAACAAAAAGGTGCAAAACAAGAAAAAAAGTGTTGGAAGAGCAACTC----------------------------
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---------------------------------------------------------------------ATATACACTGT
TTAAGCAAATCTAGTGCTACTGTGAAGCAACTCCTATGAGCTACTACATGCTACATGATAACCAAGGAGAAACCTTATTA
TCGCTAACTGATAAAAACAAAAAGGTGCAAAGCAAAAAAGAGTTGAAAGTAAGCAACTCATGTACTATATTTAAGCAAAT
CCAGTGCTATTGTGAAGCAACTTCTATGAGCTACTACATGCTACCTGATCACCAAGGAGAAACCTTATTATCGCTAATTG
ACAAAAACAAAAAGGTGTATAGCAAAAAAAATGTTGGAAGTCAACAACTCATATACTCTATTTAAAGCAAATCCAGTGCT
ACCATGAAGCAACTACTATGAGCTACTACATGCCAGAGAAACCTTATTATCACTAACTGACAAAAACAATAAGGTGCAAA
GCAAAAAAATGTGTTGGAAATAAGCAACTCATATATTTTATTTAAGCAAATCCAGTGCTATCATGAAGCAACTCCTATGA
GCTACTACATGCTGGAGTGCTACCGCGAAGCAACTCCTATGAGCTACTACATGATACCTGATGACCAGGAAGAAACCTTA
TTATCGCTAACTGACAAAAACAAAAAGGTGCATAGC---AAACAAAATGTTGGAAGTAAGCAACTCATATACA-TGTTTA
AGCAAATCCAGTGCTACTGTGAAGCAACTACTGTGAGCTACTGATACATACATTTTGCATCATGTTTTCTTACTGTTATT
TTTGATGTTTTTATTTATAATAATGCTTTTTGAAGTAATTCTAATGTCTTTTCTCTTATAATTTGCAAGGTACACACCAA
GAGGGAGAATTCCGGCAGCTGGAAATCTGGACCTGGAAAAGCTATGTCAGGCTACCTATTCTGCACAACTCCAAACAAGC
TGAAACATCATGGAGATTTTTTATGGAATATTTAAGGAATATTGGAGGAAATACTACCAGAGGGGGCCCACCAGGTGGGC
ACAACCCACCTGGGCGCGCCAGGGAGCCCAGGCGCGCCCTGGTGGGTTGTGCTCACCCAGGCCCACCTCCGGTGCCCATA
TTCTAGTATATAGGTCATTTTGACCTAGAAAAATAAGGAGAGGATTTTCGGGACAGAGTGCCGCCGTCTCGAGGTGAAAC
TTGGGTAGGAGCACTTTTGTCCTCCGGCGGAGCGATTCCGCCGGGGGAACTTCCCTCCCGGAGGGGGAAATCATCGTCAT
CATCATCATCACCAAAAACTCTCCCACTCGGGAAGGGAAATCTCCATCAACATTTTCAACAGCACCATCTCATCTCAAAC
CCTAGTTCATCTCTTGTGTTCAATCTTGTTACCGAAACTATAGATTGGTGCTTGTGGGTGACTAGTAGTGTTAATTACAT
CTTGTAGTTGATTACTATATGGTTTATTTGGCGGAAGATTATATATTCAGATCCATTTTGCTATTTAATACTCCTATGAT
CATGAGCATGATTATTATTTGTGAGTAGTTACTTTTGTTCTTGAGGTCACGGGAGAAATCATGTTGCAAGTAACCATGTG
AATTTGATATGTGTTCGATATTTTGATAGTATGTATGTTGTGATTCCCTTAGTGGTGTCATGTGAACGTCAACTACATGG
CACTTCACCATATTTGGGCCTAACTGAATGCATTGTAGAGTAGCAATTAGATGATGGGTTGCGAGAGTGACAGAAGCTTA
AACCCTAGTTTATGCGCTATTTCGTAAGGGACCGATTGGATCCAAAAGTTTAATGCTATGGTTATAATTTATTCTTAATA
CTTTTCTCGTAGTTGCAGATGCTTGCGGGAAGGTTAATCATAAGTAGGAGGTTTGTTCAAGTAAGAACAACACCTAAGCA
CCGGTCCACCCACATATCAAATTATCAAAGTAGCGAACACGAATTAAACCAACATGATGAAAGTGACTAGATGAAATTCA
TGTGTACCCTCAAGAACGCTTTGGTTATTATAAGAGACCATTTTGGCCTGTCCTTTGCCTCAAAAGGATTAGGCTACCTT
GTTGCACTTTTGTTATTACTATCGTTACTTGCTCGTTATTATCTTGCTATCAAACTACTCCGCTACTTACAATTTCAGCA
CTTGCAGACATTACCTTACTGAAAACTACTTGTCATTTCCTTTTCCTCCTCGTTGGGTTCGACACTCTTACTTATTGAAA
AGAGCTACAATTGATCCCCTATACTTGTGGGTCATCAGCTACTACATGCTACCAGATGACCAGGGATAAACCTTATTATC
GCTA-TAATCAGAAACTCATTTGGCACCTTCGGGACATGTAACATGCGATACTTATTGCAAATATTGTTTATCATCATGG
AAAAAATACA--AAAATGCATGCCGATTTTTCATTTTCCCAACTAAAACTACTGTGTCATATGCCAACTAAATGTAGGTG
ATATAAAGTGTAAGA-------------------------------
>SNPs
S---SS--S-SSSS------------------------------------------------------------------
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-------------SSSS---------------S--SSS------S-------------S-------------------S-
-------S--SSSSS-----------S---S--S---------------------------------S-S----------
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-----------SSSSSSSSS-SSSSSS------------------------S---------------------S------
-------------------S---------S------------SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--------------S--S-----S-------------S----------------S----------------S----S--
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
S-----------------------------------------------------------S-------------------
--------------------------S-----------------------------------------------------
------------S------------------------------------S------------------------------
--------------------------------S------------SS---------------------------------
---------------------SSSSSS----S------------------------------------------S-----
--------------------------------------------------------------------------------
---------------------S--------------------S-------------------------------------
---------------------------SSSS----------SSSS----S------------------------------
-------------------------------------SS-----------------------------------------
-----------------------------------------------------------------------------S--
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-------------------------------------------S------------S-----------------------
----S----------------------S-------------------------------S-------------S---S--
-------------------------------------------------------------S------------------
-------------------------------------------------S--------------------S---------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
------------------------------------------S-------------------------------------
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----------------------------------------------------------------------------S---
-----------------------S-------S---------------------------------------S------S-
---SSSSSS----------------S------------------------------------------------------
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-------------------S--S-------------------S----SSSSSSSSSS------S---S----S---S---
-SS-----------------------------------------------------------------------------
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------------------------------------------------------------------------------S-
-----------------SSSSSS-----------------------SS-------S----S-----------S---S---
SS-----------------------S-----S----------------------------------------------S-
S------------------------------------------------------------------SS-----SS----
-----------S--------S-------S--S------------------------------------------------
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-------------------------------------------------S----S-------------------------
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--------------------------------SS--SSS---S------S----------------------SS------
---------S--S----S-----------S--------------------------------------------------
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-----------------------------------S----------------SS------------S-------------
----S------S------S---------------S-----------------------------------S-----S--S
------S-SSSS-----------SS-----------S-S--S---------S--------------------------SS
---S---S-S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1831
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---------------------------------------------------AGTATTTCCGGACGGAGGGA---------
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>reverse_3845
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----ATCCGCTTGACCTAGGCAAC--------------------------------------------------------
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----------------------------------------------
