>input_sequence_56984
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATG
GTGATCCTGCGCTCTCACAGGTAGGCGGCCGGTGCGGCGACCGG------AAGGGAGCACCACCGGCTCGATCTGCTTGC
TTTGACGTGTCGACTTTCGGCCGTCTTCTTGGCTGTTTCACCGGTCTGATTTTCCGAGCACAGGGACACGGAGACGGCGG
AGATGGCGCAGGG---------CAGCCCGGACCTGGCTGGTTTCCGGTTCTACAAGCTCATGGCTGCCGGAATGTCCTGG
GAGAAGCTGGTACTTAGTTCCGCATG----------CTCTGCTAGCTAGT----TCACCAAGCA----CGAGCTCGTCTC
TCTCTCATCTCTCTGCTTGCTTACTG--------TTTCTTGCCGCCCGTCTGAACTGCAGGTGCTGCCTGACAAGTTCGT
GAGCGAGCTCAGCGGCCTTGAGCTCCGGGGCGTGAAGCTGCGGGTCGACGGCGGAGGGGCGCGCGCGTGGGACGTGGAGG
TCGTCGCCAACGAGCACGGCGACATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATAGAGCTGGGG
CAGCTCCTCGTCTTCTGCTACGACGGCGC------CGCCCTGCTCACCGTCAAGGTGTTCGACGACTCCGAGTGCGGGAG
ACACTGCTGCCAGCGCGAGGAGGAAGACGACAGCGCCGGTACGTTCCCTTCCCTTGTAGTATCTTCCCTTGCAGTATATA
T-ATATCCTGGAACTGACAGTGCGCGGGTGAGTTGAGCAGAA---GAGGAGGAGTCTCCGCCACCGGCGTTGCCAGGGAG
TGGAAGCA---GCAGCAGCGACGGCGTCGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGG
GGCAGTGCCACCTGGGCACCAAGAAGAAGCAGTACCTGGTGAGCCGTGGCTGTAACCTGTAAACGTGCGCCCCTCC----
-CCGCATCTTTGGTTTCTGACTGTT--------TGCCGGTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGG
TTCACGGAGAAGGGCAGGGTGGTGCTGCGGATGCGCGGGCAGCAGTGGAGCGTCTGCCTCAAGCACAGCAACCGGCGGAA
GGGCAACGCCAGGACCCGCACGGCGCTGAGGTACGGGTGGAACCAGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACA
TCTGCTTCTTCCAGCTGCTGCAGGACGCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACC
ATCGTCCAGTGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr3A_1_TraesCS3A01G405100
GGCGGCAATTGTACCGAGGTCGAAGATGATGACCTGCTTGCGATTGGTTGCAGATCCTTCTGCTGCAGGGGTCTTCTCTT
AAGATTCAGGGATGATGACCTGCTTGCGATTGGTTGCAGATCCTTCTGCTGCAGGGGTCTTCTCTTAAGATTCAGGGATG
ATGACCTGCTTGCGATTGGTTGCAGATCCTTCTGCTGCAGGGGTCTTCTCTTAAGATTCAGGGATGATGACACAGGGCTC
CGGAGATCTTCTTGCGTTATGGTTGTCTTAGGGTACTCTAGGTGTTCATGGTCCTTTGTGTTTGGATTTCAGTGTGCTGG
TAAGGATCAACTACTTTGTACTGATTCGTGATGTAAATGATAAAATTCTAAAAAAAAGTGGTAGTTTACCCCATATCCCT
CCATGGCAGCCAGGGGTTGGGCATTTACCAGCATCTTAACCTGTTTCTTCTTCAGTTACTCTGGTTTGGCTCTGCGTAGA
GAAAGTGATGACCCATAAACAGATACTTACACATCAAATATAATTACTTCCTCGGTAAGCAGCCTTAGAACACGGAAAAT
ATCCAGTTACGTACACCACGAT-AATGCGCGGGGAAGAGTAGCTGTAGGCGTGTAG----AAGAGAGTGTAGCCTGTAGG
CGTCT---AAACCACCAAGCGCTTGGCCCGCACACGACACAACCGAGCATG-CATGGATAGAGCCATGTGAGCTCCAAAG
GCTACAGCACACACGCCGCGCAGCTTGACGCCCTTTCGGTGTTCGCTGCCAGTAAAGCGAGGCCCATCTCGTGTGTGTCC
TGCGTGCCGCTTCTTGCTAAGAAGTGGCAAACGAGACGTACGTGATGGGTGCGTATGTGTTGGTGCTGCGCAGTTACATC
GATCCCAGCGTTC----TACAAGAGATTCCTCGCCTCCTCC-----------CACCCCACTCCAGCACAAGATTC-CAGC
CTCCTCCTCCTCCTCCCACCAGTGAG----------AGTGAGACTTAGACCAGCCGGTGGCCTCGCCC--GTGCTCCATG
GTGATCCTGCGCTCTCACAGGTAGGCGGCCGGTGCGGCGACCGG------AAGGGAGCACCACCGGCTCGATCTGCTTGC
TTTGACGTGTCGACTTTCGGCCGTCTTCTTGGCTGTTTCACCGGTCTGATTTTCCGAGCACAGGGACACGGAGACGGCGG
AGATGGCGCAGGG---------CAGCCCGGACCTGGCTGGTTTCCGGTTCTACAAGCTCATGGCTGCCGGAATGTCCTGG
GAGAAGCTGGTACTTAGTTCCGCATG----------CTCTGCTAGCTAGT----TCACCAAGCA----CGAGCTCGTCTC
TCTCTCATCTCTCTGCTTGCTTACTG--------TTTCTTGCCGCCCGTCTGAACTGCAGGTGCTGCCTGACAAGTTCGT
GAGCGAGCTCAGCGGCCTTGAGCTCCGGGGCGTGAAGCTGCGGGTCGACGGCGGAGGGGCGCGCGCGTGGGACGTGGAGG
TCGTCGCCAACGAGCACGGCGACATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATAGAGCTGGGG
CAGCTCCTCGTCTTCTGCTACGACGGCGC------CGCCCTGCTCACCGTCAAGGTGTTCGACGACTCCGAGTGCGGGAG
ACACTGCTGCCAGCGCGAGGAGGAAGACGACAGCGCCGGTACGTTCCCTTCCCTTGTAGTATCTTCCCTTGCAGTATATA
T-ATATCCTGGAACTGACAGTGCGCGGGTGAGTTGAGCAGAA---GAGGAGGAGTCTCCGCCACCGGCGTTGCCAGGGAG
TGGAAGCA---GCAGCAGCGACGGCGTCGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGG
GGCAGTGCCACCTGGGCACCAAGAAGAAGCAGTACCTGGTGAGCCGTGGCTGTAACCTGTAAACGTGCGCCCCTCC----
-CCGCATCTTTGGTTTCTGACTGTT--------TGCCGGTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGG
TTCACGGAGAAGGGCAGGGTGGTGCTGCGGATGCGCGGGCAGCAGTGGAGCGTCTGCCTCAAGCACAGCAACCGGCGGAA
GGGCAACGCCAGGACCCGCACGGCGCTGAGGTACGGGTGGAACCAGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACA
TCTGCTTCTTCCAGCTGCTGCAGGACGCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACC
ATCGTCCAGTGACTAGACTACTGATTCGGGTTAATTTGTGCCTTGAGCTTGATGTGATGGCAAATAAGCAAGGAATGGAC
TGTATGATGAACCACGATCTGGATGTTGGATGAATGAACTGCTTTTATTATTTATTATA--CTAGTATATATAATCTGCG
ATGAGCTGCTAACCATCGAGGAAACAAAAACCA--CTTGACCTAGGCAACCCACCAAGCGCCACCCAACTATGAACGAGT
AATGTTAGACCTAGGTAAGGTTAGTAAATATTTTCTGTAAAAGGGAACGTGGTGAGGTGGGATTGGATGGATAGATGCAG
CAAGGGCCCACCCCGTTAAAATCAGTGGGCCAGAGAGTGTTAGGAAGCTTTCGTAAATCTTCGTAGTGTGTTATATAGAT
GTAGGATTATCGAGTATGGACAGATGAACAAATCATGGGAGATGGCAGTGATCCAAACAATAGAAACGATAGTCGCACGA
GGACTCAGGATAACAGATAACCCGGTGGCTAAATTTCGTGTTTTGACCCCTTTTTGAAACTTGATCAAGATTCGACCCTG
CCTTGCAAAAATTTTGGGATCTTATTATTTTCTTACCGCCAGGGTCCATGGCGGCAGGGTATAACAGCCTACCGCCAAGG
TCCCTGACGGTAGGGTTGCACGTCCAACCGAAAAATCTTCTAAGTATGAAACATAGTGCATGCTCGCACCTATTGCCGGG
CACCTTGGCGGTAGAGTTGTACAGGCTACCGCCAGCCTGCTCAGTGGTAGGGGTGTTTTCTATCGCCATAGACCCTGGCG
GTAGCAAAAGGGTCAGATCCCGAAATTTCGTGTTTTGACCCTTTTTTGAAACTTGATCGAGATCTGACCCTGGCTTGCAA
AATTTTTGGGATCTTACCCTTTTCTTACCGCCAGGGTCCATGGCGGTAGGGTATAACAGTCTACCGCCAAGGTCTCTGAC
GGTAGGGTTGCACGCCCAATCGAAAAATCTTCCTAAGTATAAAACATAGTGCATGC
>chr3B_504
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TACTTACGTATCAAATATAATTAATTTCTCGGCAAGCAGCCTTAGATCACAGAAAAT
ATCCAGGTACGTACACCACGAAACATGCTCGGGGAAGAGTAGCTGTAGCCTGTAGGCGTCAAGACGCTCGCACGCATTGA
AAGATGAGAAACCACCAAGCGCTTGGCCCGCACACAAC-----CGAGCATGC-ATGCATAGAGCCATGTGAGCTCCAAAG
GCTACAGCACACAGGCCGCGCAGCTTGACGCTCTTTCGGTGTTCGCTGCCAGTAAAGCGAAGCCCATCTTGTGTGTGTCC
TGTGTGCCGCTCCTTGCTAAGAAGTGGCAAACGAGACGTACGTGATGGCTGTGTATGCGTTGGTGCTGCGCAGTTACATC
GATCCCAGCGTTTTATTTACAAGAGATTCCTCGCCTCCTCCTCCCCTCCTCCCATCCCACTCCATCACAAGATTCGCAGC
CTCCTCCTCCTCCCAT---CAGTGAG----------AGTGAGACTGAGACCAGCCAGTGGCCTCGCCCGTGTGCTCCATG
GTGATTCTGCGCTCTCACAGGTAGGCGGC----GCGGCGACCGGCCGGAAAAGGAAGCACCACCAGTTCGATCTGCTTAC
TTTGACGT-------TTTGACCATCTTCTTGGTTGTT-CATCGGTGTAATTTTCCAAG--CAGGGACACGGAGACGGCGG
AGATGGCGCAGCAGCTGCGGGACAGCCCTGACCTGGCTGGTTTCGAGTTCTACAAGCTCATGGCTTCCGGAACGTCCTGG
GAGAAGCTGGTGATTACTTGCACATG----------CTCTCCTAGCTAGCTAGTTCATTAAGCACGAGCGAGTTCGTCTC
TCTCCCATCTCTC----TGCTTACTG--------TTTCTTGCCGCCCGGCTGAACTGCAGCCGCTGCCTGACAAGTTCGT
GAGGGAGCTCAACGGCCGTGCGCTCCGGGACGTGAAGCTGCGGGTCGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGG
TCGTCGCCAACGAGTACGGCCACATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATACAGCTGGGG
CAGCTCCTCGTCTTCTGCTACGACGGCGCCG------CCCTGCTCACCGTCACGGTGTTCGAGGACTCCGAGTGCGGGAG
ACACTGCTGCCAGCGCGAGGAGGAAGACGACAGCGCCGGTACGTTCCCTTCCCTTGTA---TCTTCTCTTGCAGTATATG
-----TCCTGGAACTGACAGTGCGCGGTTGAGTTAAACAGAA---GAGGACGAGTCTCCGCCACCGGCGTTGCCAGGGAG
TGAAAGCA---GCA---GCAACGACGACGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGG
GGCAGTGTCACCTGGGCACCAAGAAGAAGCAGTACCTGGTGAGCCGTGGCTGTAAATT---AACGTGCGCCCCTCA----
-TCGCATCTTTGGTTTGTAACAACTGTTTGCCGTGTCGTTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGG
TTCACGGAGAAGGGCAGGGTGGTGCTGCGGATGCGTGGGCAGCAGTGGAGCGTCTGCCTCAAGCACAGCAACCGGCGGAA
GGGCAACGCCAGGACCCGCACGGCGCTGAGGTACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCACGTCGGCGACA
TCTGCTTCTTCCAGCTGGTGCATGATGCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACC
ATCGTCCAGTGACTA-----CTGGTTCGTGTTAATTTGTGC------CTTGATGTGATGGCAAATAAGCAAGGAATTGA-
TGTATGATGAACCACGATCTGGTTGTTGGATGAATGAACTGCTTTTATTGTTTATTACTAGCTAGTATATATAATCTGCG
ATGAGCTGCTAACCATCAAGGAAAAAAAAGATCCGCTTGACCTAGGCAACCGACCAAGCGCCACCCAACTATGAAC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr3D_541
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGCCTTATCACACAAAAAAT
ATCCAGTTATGTACACCACG-AAAATGCGCGGGGAAGAGTAGCTGTAGGCGTGATG----AAGACGCTCGCACGCATTGA
AAGATGAGAAACCACCAAGCGCTTGGCCCGCACACAACACAACCGAGCATGCCATGCATAGAGCCATGTGAGCTCCAAAG
GCTACAGCACACACGCCGCGCAGCTTGACGCCCTTTTGGTGTTCTCTGCCAGTAAAGCGAAGCCCATCTTGTGTGTCCCC
TGTGTGCCGCTTCTTGCTAAGAAGTGGCAAATGAGACGTACGTGATGGGTGCGTATGTGTTGGTGCTGCGCAGTTACATC
GATCCCAACGT----TTTACAAGAGATTCCTCGCCTCCTCCTCTCCTCCTCCCATCCCACTCCATCACAAGATTC-C--C
CGCCTCCTCCTCCCAT---CAGTGAGCGAGAGCGAGAGTGAGACTGAGACCAGCCGGTGGCCTCGCCCGTG--CTCCATG
GTGATTCTGCGCTCTCACAGGTAGGCGGT----GCGGCGACCGG------AAGGGAGCACCACCGGTTCGATCTGCTTAC
TTTGACGTGTCGACTTTCGGCCGTCTTCTTGGCTGTTTCATCGGTCTGATTTTCCAAG--CAGGGACACGGAGACGGCGG
AGATGGCGCAGGG---GCAGGGCAGCCCGGACCTGGTTGGTTTCCAGTTCTACAAGCTCATGGCTGCCGGAATGTCCTGG
GAGAAGCTGGTAATTACTCGCGCATT----------CTCTCCTAGCTAGC----GCACCAAGCA----CGAGCTCGTCCC
TCTCTCATCTCTC----TGCTTGCTTACTGTTTCTTTCTTGGCGCCCGGCTGAACTGCAGGTGCTGCCTGACAAGTTCGT
GAGGGGGCTCAACGGCCGCGAGCTCCGGGGCGTGAAGCTGCGGGTGGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGG
TCGTCGTCAACGAGTGCGGCGACATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCGTAGAGCTGGGG
CAGCTCCTCGTCTTCTGCTACGACGGCGCCGGCGCCGCCCTGCTCACCGTCAAGGTGTTCGACGACTCCGAGTGCGGGAG
ACACTGCAGCCAGCGCGAGGAGGAAAACGACAGCGCCGGTACGTTCCCTTCCCTTGTA---TCTCCCCTTGCAGTATATA
-----TCCTGGAAGTGACAGTGCGCGGGTGAGTTGAGCAGAA---GAG---GAGTCCCCGCCACCGGCGTTGCCAGGGAG
TGGAAGCAGCAGCA---GCGACGGCGTCGTCCATGGCGGCGGAGGCGGCGCCGCGCCGAGTCGGTTCACCGTGACGCTGG
GGCAGTGCCACCTGGGCACCAAGAAGAAGCAGTACCTGGTGAGCTTTGGCTGTAAATT---AACGTGCGCCCCTCCTCTC
CTCGCATCTTTGGTTTCTGACAACTGTTTGCCGTGCCGATTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGG
TTCACGGAGAAGGGCAGGGTGGTGCTGCGGATGCGCGGGCAGCAGTGGACCGTCTGCCTCAAGCACAGCAACCGGCGCAA
GGGCAACGCGAGGACCCGCACGGCGCTGAGGTACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACA
TCTGCTTCTTCCAGCTGGTGCAGGACGCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGCACC
ATCGTCCAGTGAC--GACTACTGGTTCGTGTTAATTTGTGCCTTGAGCTTGATGTGATGGCAAATAAGCAAGGAATGGAT
TGTATGATGAACCACGATCTGGATGTTGGATGAATGAACTGCTTTTATTATTTAGTATTAGTAGTAC--TATAATCTGCG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>chr3B_1126
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATTTTCCAAG--CAGGGACACAGAGACGGCGG
AGATGGCGCAGCAGCTGCGGGACAGCCCTGACCTGGCTGGTTTCCAGTTCTACAAGCTCATGGCTGCCGGAACGTCCTGG
GAGAAGCTGGTGATTACTTGCACATGCATGACTGTGCTCTCCTAGCTAGT----TCATTAAGCA----CGAGCTCGTCTC
TCTCCCGTCTCTC----TGCTTACTG--------TTTCTTGCCGCCCGTCTGAACTGCAGGTGCTGCCTGACAAGTTCGT
GAGGGAGCTCAACGGCCGAGCGCTCCGGGACGTGAAGCTGCGGGTCGAGGGCGGAGGGGCGCGCGCGTGGGACGTGGAGG
TCGTCGCCAACGAGTGCGGCGACATGCACCTCGGCAGGGGCTGGAAGGAGTTCGTCCGCGCCAACGGCATACAGCTGGGG
CAGCTCCTCGTCTTCTGCTACGACGGCGCCG------CCCTGCTCATCGTCACGGTGTTCGAGGACTCCGAGTGCGGGAG
ACACTGCTGCCAGCGCGAGGAGGAAAATGACAGCGCTGGTACGTTCC-----CTTGCA---TCCTCCCTTGCAGTATATA
TTATATCCTGAAGCTGACAGTGCGCAGGTGAGTTAAACAGAAGAGGAG---GAGTCTCCGCCACCGGCGTTGCCAGGGAG
TGGAAGCA---GCA---GCGACGGCGACGTCCATGGCGGCGGAGGCGGCGCCGTGCCGAGTCGGTTCACCGTGACGCTGG
GGCAGTGCCACCTGGGCACCAAGAAGAAGCAGTACCTGGTGAGCTGTGGCAGTA-------AACGTGCGCCCCTCC----
-TCGCATCTTTGGTTTCTAACAACTGTTTGCCGTGTCGTTTAAGCAGAACGTGCCTGTGGAGTTCAGCCAGTCGCACGGG
TTCACGGAGAAGGGCAGGGTGGTGCTGCGGATGCGCGGGCAGCAGTGGACCGTCTGCCTCAAGCACAGCAACCGGCGCAA
GGGTAACGCGAGGACCCGCACGGCGCTGAGATACGGGTGGAACCGGTTCCGCGTCGACAACGGCCTCCGCGTCGGCGACA
TCTGCTTCTTCCAGCTGGTGCATGATGCCGGCGGCGACGACCCGGTGCTCAGCGTCGAGGTGCGCAAGGCGGACGGAACC
ATCGTCCAGTGAC--GACTACTGGTTCGTGTTAATTTGTGCCTTGA------TGTGATGGCAAATAAGCAAGGAATTGAT
TGTATGATGAACCACGATCTGGATGTTGGATGAATGAACTGCTTTTATTATTTAGATATAC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-------SS--------------S--S-----S-----------------S------
---------------------S-------------------------------SS---------SSS-SSSS-SSS-S-S
SSSS-------------------------------S--------------------S-----------------------
------------------------------------------------------------S--------S----------
--S-----------------------------------------------------------------------------
------------S-----------------------------------------S---------S---------------
-------------SSSSSS--------------------------S----------------------------------
-----S-----------------------SSSS---------------------------------S-----------S-
----------------------------------------S--------------S--SS--------------------
---------------------------------------------S----------------------------------
------------S---S--S--------------------S---------------------------------------
-------------SSSS---------------------------------------------------------------
---S-------S-----S------------------------------S-------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------SSS-------------------
--------------------------------------------------S-----------------------------
--------------SSS---------------------------------------------------------------
-------------------------------------------------------SS-SSS-------------------
-S-------------------SSS--------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
-----------------S--------------------------------------------------------------
-----------------------S----S--------------------------------------------------S
----------------------------------------------------------S---------------------
-----------------S------S----SSSS------------------S------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_253
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AGGGCTC
CGGAGATCTTCTT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_1161
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------CCGGTCTGATTTTCCGAGCA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TACTCTGGTTTGGCTCTGCG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_2511
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CCACTTGACCTAGGCAACCC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
