>input_sequence_56977
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-----------------------------------------------------ATGGAGGATGCTTCCGAGGAGATTTCC
CAGCGGTGAGAGCATCCGGTCTCCCCATCCCTTCAGATTCCTCCCCAATTTGTTTCATTTCCAGCAGTACTGTATTTCTT
CAGTGTCCTGCAGTTTGTTGGATGCTGATGTTTTTATGCCATATTGGTGGAAGCAATCAGCCCATTGCATTGACTCTTTT
GCGTTTGTTCGCCGCTCCGATTTTTCCAGGCTCCGTCCAGAGAAGAAACCGTGTGCCGATGGCGAATCGCAGCAGCATTT
GCCGGC------------------ATCCATGGTGCTCGACGACGACAACCTCCTCATTGAGATCCTC---------A---
------GCTTCCCCACCACACTTGTATGCGCCACCCTCGTCTGCAAGCGCTGGCTCTGCCATGCCTCTGACCCTAAGTTC
CTCAGCCTGTTCCGCAAGCGCCACCCGCCTCGCGTCCTTGGCTTCTACATATATGGAGGGTCGGCCTGGATATGGTTGGG
CGCCCCCCTGCTCTTCGTCCCCATGCAGCCCCAGCCCCCAGAGCTCGCCCCCTTCATCTCCCGTGTCGCGAGCCATAGCT
TCGGCGCCGACAATGACAGATTATGCATCATGGATTGCCGGAATGGCAGCGTCTTAACCAGATGCCGCAGAGGAACAATA
TTGACACATGGAGTGCACCGCCCACTATGCCCTCAGAGAGACATGGATGTCATCCCACCACTCCCAAGAGCCCAGTACCA
TGGTCAACAAATTTTCAATACAATCCTCTCCAAAGAAGAAGGCGGT---GTCTTGTCCTACCTGTATATGTTGGCGGAGT
TTTTCAGCAAGACAAAAAGTTTCAGGGTGCGAGTCTATATGTTGCAAGGTGGCGTCTGGTGCATGCATGCCTCGGCCACG
ACACAGCTCCCTCGTCTGCTGACGTCACTGGCAGTTGTGCTTGTTGACGATAAAATCTATATGGCTGACACCTTCAGTGA
TGAAATTATTGTCTTGGATATGACAACCTCGGGTTTCTCCACAATTCTGCTCCCACAAGGAGTGAATTTTCACTGTGTTC
GCACCATCATGTCACGTGCCGGTGATGCTTCTGGTGTATATCTCACCCATATCCATGTCAAGGAGCTACAGCTTTGCATC
TGGCTCCACAAAGGGGACAACTGGTTGTTGGTTGATACAATTTGTTTGCATCAGATGTGGGATAATTTGATGATGCTGGA
TCAGAC-CTTGAGGATGAGCATATTAGTTTTAATTGTATAA---------------------------------------
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>chr1D_1_TraesCS1D01G402800
GTTTCCATATTTTGTTTGGAAGATTCAAAAAAATGTTCTTATTTTAAAAAAAA--TCAGAAATTTCAAAAC-TGTTCATG
T------TTTTGCTCGGGAGTTTGAAAAAAGTCCGT-TTTCAGTAATTTTGTGCATTTTACTAAAAATGTTTGTTTTTTC
AAAAAAAATC-CCGATGTTCCAAAAAAATTTCTAGTTTTCATAAAATGTCTGCGTTCTGAATTTTATTTTGGAA-TTTCA
AAATATGTTCCCGTTTTT---AAATATTTGTGTTTTCTAATTTTGTTCCAGAGTTTCATAAAATGTTCGTCTTTTCCAA-
----------------------------TTTCAAAAAATGTTCACATATTCATTTTTTCCAGAGTTTC--AAAAATTGTT
CATTTTCTTTCAAAAATAAAATCCCGTTTTG-GAAAATGTTTGTTTTTCCAAAAAAA------TTAAAAAATTAAAAAGT
GTCTGCGTTTCATAATACGTTCT--TTTTTTTGAAACAAATGTTTTGCGTTCGAAATT-AGAAAATACTCGGATCTGCGA
TGGTTTTGGTTCTTAATTGATTCGC-GAGCAAAATATTCAGATACGGTCTTTGGTTCAACCGGCAGCTTGGTCGCCTC--
---------ATTCGCCCACTAGTAAAAAAACAAGAAAAAAAAAACAGCTCCACTCGCCTGCGCCGGCATCGCAGCCCCCT
CTCCGCCGGCGACTTCTCCCAGCGATTGCTCCGGCTACCCC-------------TGCCAGCGACCGCTGACTTCCGGGAA
CCCAGATCCGCTCAAAGGCACTTACTCTCCTCCACCGCATCGACCCGCCGGAAGAAAGGAGTGCGGCCGGCGACCTGAGC
TTTCTCGCCCCGGCAGCGGCGAGCCTTCTTCCCCCCTCCCCCGACTCGAATGAGGCGAGCCTTTATCCTTCCTCTTCTCT
CCTAATTCATTCTTCATCTCTTTTCATCTAAGC-------ACCCTAGGT-----AATTAGGATTTCCCCCCCTAATTCAA
CTCTACCTGCATGTACTTACTCAGCTGAGGGCACTCCAATAGCCCGATAGATAATGGAGGATGCTTCCGAGGAGATTTCC
CAGCGGTGAGAGCATCCGGTCTCCCCATCCCTTCAGATTCCTCCCCAATTTGTTTCATTTCCAGCAGTACTGTATTTCTT
CAGTGTCCTGCAGTTTGTTGGATGCTGATGTTTTTATGCCATATTGGTGGAAGCAATCAGCCCATTGCATTGACTCTTTT
GCGTTTGTTCGCCGCTCCGATTTTTCCAGGCTCCGTCCAGAGAAGAAACCGTGTGCCGATGGCGAATCGCAGCAGCATTT
GCCGGC------------------ATCCATGGTGCTCGACGACGACAACCTCCTCATTGAGATCCTC---------A---
------GCTTCCCCACCACACTTGTATGCGCCACCCTCGTCTGCAAGCGCTGGCTCTGCCATGCCTCTGACCCTAAGTTC
CTCAGCCTGTTCCGCAAGCGCCACCCGCCTCGCGTCCTTGGCTTCTACATATATGGAGGGTCGGCCTGGATATGGTTGGG
CGCCCCCCTGCTCTTCGTCCCCATGCAGCCCCAGCCCCCAGAGCTCGCCCCCTTCATCTCCCGTGTCGCGAGCCATAGCT
TCGGCGCCGACAATGACAGATTATGCATCATGGATTGCCGGAATGGCAGCGTCTTAACCAGATGCCGCAGAGGAACAATA
TTGACACATGGAGTGCACCGCCCACTATGCCCTCAGAGAGACATGGATGTCATCCCACCACTCCCAAGAGCCCAGTACCA
TGGTCAACAAATTTTCAATACAATCCTCTCCAAAGAAGAAGGCGGT---GTCTTGTCCTACCTGTATATGTTGGCGGAGT
TTTTCAGCAAGACAAAAAGTTTCAGGGTGCGAGTCTATATGTTGCAAGGTGGCGTCTGGTGCATGCATGCCTCGGCCACG
ACACAGCTCCCTCGTCTGCTGACGTCACTGGCAGTTGTGCTTGTTGACGATAAAATCTATATGGCTGACACCTTCAGTGA
TGAAATTATTGTCTTGGATATGACAACCTCGGGTTTCTCCACAATTCTGCTCCCACAAGGAGTGAATTTTCACTGTGTTC
GCACCATCATGTCACGTGCCGGTGATGCTTCTGGTGTATATCTCACCCATATCCATGTCAAGGAGCTACAGCTTTGCATC
TGGCTCCACAAAGGGGACAACTGGTTGTTGGTTGATACAATTTGTTTGCATCAGATGTGGGATAATTTGATGATGCTGGA
TCAGAC-CTTGAGGATGAGCATATTAGTTTTAATTGTATAAGCAATGTGGGGGATAATGCTGAATTTGTGTTCTTGGA--
-AATGTGTGGCTGCATTTTCTATCTGGATGTCATAAGCAAGACACTGCGTAAAGTGCATGGGGTGACAGTAAAGGATCGA
CCGTTCAATGATGTCTATCCTTTTATGATGATTTGGCCGCCCATATTCCCCGCGCCCAAGGATGATCCTGGAAGGTTTGC
TATTTTG---GCCTTTAGATGGTC--TGTATATTCCTTTTGTTGAGGTTACGTGGTTTTGCAATATGCACTAGT------
------TTGGTATAGCTGTGGTATGGTATTAGTATATGCTTGATTCTTTAGGCCATTTTAACA--ATACTAACTACGCGA
TATTAGATAATGCTTGCCTTAAGATGTCTTAAAATCACTTGTGCAATGGGCTAATATTACGTGGTGTTTACGACCATACA
AAGTATAGAACATGTATAGGAGCTTGACCTCTGTACTTCATT-ATCGTGAAATATTATCACAAACCAATCAAGCCTGGAA
TTTTAACTTCTCATTTCTTAAGTCATTATTTTTGCTGAACCTATGTATGTGATTGTCTTCACTGAAACTTATGCATGAGA
TTGTAATACTTGTTTTTTTTTTTCGCTGAATGTTGCTTAGTATTTTTTTTCCTTGGACACAAATGGATGTACATTTTACA
CAGCCAGGTATTGTTGAGGTTATACTACAAATGGCTAGTCCAAGCTAACGCTTGATAATTTGGGCTTGTGTGTCAGGCAT
TTTTCCTTGTATGATTAGATTTTTTGTTTTACTGAAATACAAACTATGAAATGGAAACATGTTGCTCTGCAAATATATAT
AATGCCATTTAAGCTCTATGGGCTGTAGCTTTTGATAAA------AAAAACCCTATGTTGCTGGACAAAGTTGATTTTTT
TTTATTTCTGAGTGTACATAACATTTGACTGACAAATGGTAATAAAATGTTCTGATGCTGAATTACCTCTACTATATCCT
GATCCTTCCTCTGTTTCCTTGAACCAGAAA
>chr1D_1
GTTTCCAATTTTTTTCCGGAAGATTCAAAAAA-TGTTCTTGTTTCTGAAAATTGTTCAGAAATTTCAAAAATTGTTCATG
TCGTAAATTGTGTTTGGGAGTTTTAATTTTTTTTCCATTTCAATAATTATGTGCATATTTCAAAACATGTTTGTG-TTTC
CAAATTTTGTTCCAAAGTTTCAAAAAAAAATG--GTTTTCAAAAAATGTTCGCTTTCCAAATTTAGTTTTAGAATTTTTA
AAAAATGTTCCCATTTTGGAAAAATGTTTGTGTTTTCGAATTTTGTCCCAGAGTTTCATAAAATGTTCATGTTTTCCAAA
AACTTAGAAA------------------TTTCAAAAAAGCTTCACATATTAAATTTTTCTAGAGTTTTAATT---TTTTT
CAGTAT-TTTCAAAAATATTATTCCCGTTTTTGAAAATATTTGAGTTTTT---AAAATTTTCTTCACAAATTTAAAAAGT
GTTCACGTTA-ATAAAACATTTCC--TTTTTTAAAACAAATGTTTTGGGTTTGAATTTTCGAAAATTCTTGGATCTGCGA
TGGTTTTGGTTCTTAATTGATTCCCAGAGCCTAATGGTCATATACGGTCGTT----------------------------
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>chr1A_2
-TTTCCAAATTTTGTTTCGAAGGTTGAAAACA-TTTTCTTGTTTTA-AAAATTGTTCACAAATTTCAATAATTGTTCATG
TTTTAAATTTTGTTTGGGAGTTTAAAGATAAATTCCGTTTCAATAATTGTGCGCAGTTTACGAAAAATGTTCATGTTTTC
AAAAAATTTGTCCGATGTTTTTAAATAACATCTAGTTTTCATAAAATGTCTGCGTTCTGAATTTTGCTTTGGAA-CTTCA
AAAAATGTTCCCATTTTA---AAATG-TTGTGTTTTCAAATTTTGTTCCAGAGTTTCATAAAATGCTCGTGTTTTCCAAA
AAAAATAGAAATTTCAAAAAGTTCCCGTTTTGAAAAAATGTTCACGTGTTCATTTTTTCCCCGAGTTTGAAAAAATTGTT
CATTAT-TTTCAAAAATAAAATCCCGTTTTTGGATT---------TTTTT---AAAA------TCACAAATTAAAAAAGT
GTTCACGTTTCATAAAACATTCTTATTTTTTGGAAACAATTTTTTTGCGTTCGAAATTTAGAAAATACTCGGATCTGCGA
TGGTTTTGGTTCTTAATTGATTCGCGCAGCAAAATATTCAGATACGGTCGTTAATTCAACTGGCAGCTTGGTCGCCTCCT
CCCAGCTCCATTCGCCCACCATTAAAAAAA-----------AAAAAGCTCCACTCGCCTGCGCCGGCATCGCAGCCCCCT
CTCCGCCGGCGACTTCGCCCAGCGATTGCGCCGGCTACCCT-------------TGACTCCCGTGA------------AA
CCCAGATCCGCTCAAAGGCACTTACTTTCCTCCACCGCATCGACCCGCCGGAAGAAAGGAGTGCGGCCGGCGACCTGAGC
CTCCTCGCCCCGGCAGCGGCGAGCCTTCTTCCCCCCTCCCCCGATTCGAATGAGGTGAGCCTTTATCCTTCCTCTTCTCT
CCTAATTTCTTCTTCACCTCTTTTCATCTCGCGGGAATAGACCCTAGGC-----AGCTAGGATTT-CCCCCCTAATTCAA
CTCTACCTACATGTACTTACCCAGCTGAGGGGACTCCAATAGTCCGATAGATGAT---GGATGCTTCCGAGGAGATTTCC
CCACGGTAAGAGCATCCAGTCTCCCCATCCCTTCAGATTGCTCCCCAATTTGTTTCATTTCCAGCAGTACTGTATTTCTT
CAGTGTCCTGCAGTTTGTTTGATGCTGATGTTTTTATGCCATATTGGTGGAAGCAATCGGCCCATTGCATTGATGCTTTT
GC-TTTGTTCGCCGCTCCGA-TTTTCCAGGCTCCGTCCAGAGAAGAAACCGTGTGCCGATGGCGAATCGCAGCAGCATT-
--CGCCGGCATCCATGGTGCCGGTATCCAAGGTGCTCGACGACGACAACCTCCTCATTGAGATCCTCCTGCGCGTCA---
------GCTTCCCCACCACACTTGTATGCGCCGCCCTCGTCTGCAAGCGCTGGCTCTGCCATGCCTCTGACCCCAAGTTC
CTCAGCCTTTTCCGCAAGCGCCACCCGCCTCGCCTCCTTGGCTTCTACATATATATAGGGTCGTCCTGGTTATGGTTGGG
CGCCCCCCTGCTCTTCGTCCCGATGCAGCCCCAGCCCCCAGAGCTCGCCCCCTTCATCTGCCGGGTCGCGAGCCATAGCT
TCGGCGCCGACAATGACAGATTATGCATCATGGATTGCCGGAATGGCAGCCTCTTAATCAGATGCCGCAGAGGAACTATA
TTGACACATGGAGTGCACCGCCCACTATGCCCCCAGAGAGACATTGATGTCATCCCACCACTCCCAAGAGCCCAGTACCA
CGGTCAAAAAATTTTCAATACAATCCTCTCCAAAGAAGAAGGCGGT---GTCTTGTCCTACCTGTATATGTTGGCCGAAT
TTTTCAGCAAGCCAAAAATTTTCAGGGTGCGCGTGTATATGTTGCAAGGGGGCGTCTGGTGCATGCATGCCTCGGCCACG
ACACAGCTCCCTCGTCTGCTGACGTCACTGGAAGTCGTGCTTGTTGACGAGAAAATCTATATGGCTGACACCTTCAGTGA
TGAAATTATTGTCTTGGATATGACAACCTCGGGTTTCTCCACAATTCCGCTCCCACAAGGAGTGAATTTTCACTGTGTTC
GCACCATCATGTCACGCGCCGGTGATGCTTCTGGTGTATATCTCACCCATATCCATGTCAAGGAGCTACAACTTTGCATC
TGGCTCCACAAAGGGGACAACTGGTTGTTGGTTCATACAATTTGTTTGCATCAGATGTGGGATAATTTGAGGATGCTAGA
TCAGACCCTTGAGGATGAGCATATTAGTTTTACTTGTATAAGCAATGTGGGGGATAATGCTGAATTTGTGTTCTTGGA--
-AATGTGTGGCTGCATTTTCTATCTGGATGTCACAAGCAAGACACTGCGTAAAGTGCATGGGGTGACAGTAAAGGATCGA
CCGTTCAATGATGTCTATCCTTTTATGATGATTTGGCCGCCCAAATTCCCCGCGCCCAAGGATGATCCTGCAAGGTTTGC
TATTTTG---GCCTTTAGATGGTC--TGTATATTCCTTTTGTTGAGGTTACATAGTTTTGCAATATGCACTAGT------
------TTGGTATAGCTGTGGTATGGTATTAGTATATGCTTGATTCTTTGGGCCATTTTAACA--ATACTAACTACGCGA
TATTAGATAATGCTTCCCTTAAGATGTCTTAAAATCACTTGTGCAATGGGCTAATATTGCGTGGTGTTTACGACCATACA
AGGTATAGAACATGTATAGGAGCTTGACCTCTGTACTTCATT-ATCGTGAAATATTATCACAAACCAATCAAGCCTGGAA
TTTTAACTTCTCATTTCTTAAGTCATTATTTTTGCTGAACCTATGTATGTGATTGTCTTCACTGAAACTTATGCATGAGA
TTGTAATACTTG---TTTTTTTTCGCTGAATGTTGCTTAGTATTTTTTTGCCTTGGACACAAATGGATGTACATTTTACA
CAACCAGGTATTGTTGAGGTTATACTACAAATGGCTAGTCCAAGCTAACGCTTGATAATTTGGGCTTGTGTGTCAGGCAT
TTTTCCTTGTATGATTAGATTTTTTGTTTTACTGAAATACAAACTATGAAATGGAAACATGTTGCTCTGCAAATATATAT
A---CCATTTAAGCTCTATTGGCTGTAGCTTTTGATAAACTAAAAAAAAAACCTATGTTGCTGGACAAAGTTAATTTTTT
G--ATTTCTGAGTGTACATAACATTTGACTAACAAATGGTAATAAAATGTTCTGATGCTGAATTACCTCTACTACATCCT
GATCCTTCCTCTGTTTCCTTGAACCAGAAA
>chr1B_607
A-------------------------------------------------------------------------------
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-----------------------AAAAAAC-----------AAACAGGTCCACTCTCCTGTGTCGGCATCGCAGCCCCCT
CTCCGCCGGCGACTGCGCC-------------GGCTACCCCCGCCAGCGACCACTGACTCCCGGGA------------AA
CCCAGATCCGCTCAAAGGCACTCACTCTCCTCCACCGCATCGACCCGCCGGAAGAAACGAGTGCGGCCGGCGACCTGAGC
CTCCTCGCCCCGGCAGCGGCGAGCCTTCTTTCCCCCTCCCCCGATTCGAACGAGGTGAGCCTTCATCCTCCCCCTTCTCT
CCCGATTCATTCTTCATCTCTTATCATCTCGCGGGAATAGACCCTAGGTAGAGTAGCTAGGGTCT-CCTCCCTAATTCAA
CTCTACCTACATGTACTCACTCAGCTGAGGAGACTCCAATACTCTGATA----AT---GGATGCTTCCGAGGAGATTTCC
CAGCGGTAAGAGCATCCAGTCTACCCATCCCTCCAGATTCCTCCCCAATTTGTTTCATTTCCAGCAGTAG-----TTCTT
CAGTGTCCTGCAGTTTGTTGGATGCTGATGTTTCAATGCCATATTGGTGGAAGCAATCGGCCCATTGCATTGACGCTTTT
GCGTTTGTTCGCGGCTCTGA-TTTTCCAGGCTACGTCCGGAGAAGAAACCGTGTGCGGATGGCGAGTCGCAGCAGCATTC
GCCGCCGGCATCCATGGTGCCGGTATCCAAGGTGCTCGACGACGACAACCTCCTCATTGAGATCCTCCTCCGCGTCA---
------GCTTCCCCACCACGCTTGTATGCGCCGCACTCGTCTGCAAGCGCTGGCTCTGCCATGCCTCTGACCCTAAGTTC
CTCAGCCTTTTCCGCAAGCGCCACCCGCCTCGCCTCCTTGGCTTCTACATATATATGGGGTCGGCCTGGTTATGGTTGGG
CGCCCCCCTGCTCTTCGTCCCGATGCAGCCCCAGCCCCCAGAGCTTGCCCCCTTCATCTCCCGTGTCGCGAGCCATAGCT
TCGGTGCCGACAATGACAGATTATGCATCATGGATTGCCGGAATGGCAGCGTCTTAATCAGATGCCGCAGAGGAAAAATA
TTGACACATGGAGTGCACCGCCCACTATGCGCTCAGAGAGGCATGGATGACATCCCGCCACTCCCAAGAGCCCAGTACCA
TGGTCAACAAATTTTCAATACAATCCTCTCCAAAGAAGAAGGTGGT---GTCTTGTCCTACCTGTATATGTTGGCCGAGT
TTTTCAGGAAGACAAAAAGTTTCAGGGTGCGTGTGTATACGTTGCAAGGGGGCCTCTGGTGCATGCATGCCTCGGCCACG
ACTCAGCTCCCTCGACTGCTGACATCATTGGAAGTTGTGCTCATTGACGATAAAATCTATATGGCTGACACCTTCAGTGA
TGAAATTATTGTCTTGGATATGACAACCTCGGGTTTCTCCACAATTCGGCTCCCACAAGGAGTGATTTTTCACTGCGTTC
GCACCATCATGTCACGCGCCGGTGATGCTTCTGCTGTATATCTCACCCATATCCATGTCAAGGAGCTACAACTTTGCATC
TGGCTCCACAAAGGGGACAACTGGTTGTTGGTTGATACAATTTGTTTGCATCAGATGTGGGATAATTTGAGGATGCTAGA
TCAGACCCTTGAGGATGAGCATATTAGTTTTACTTGTATAAGCAATGTGGGGGATAATGCTGAATTTGTGTTCTTGGA--
-AATGTGTGGCTGCATTTTCTATCTGGATGTCAACAGCAAGACACTGCGGAAAGTGCATGGGGTGACAGTAAAGGACCGA
CAGTTCAATGATGTCTATCCTTTTATGATGATTTGGCCGCCCATATTCCCTGCGCCCAAGGATGATCCTGCAAGGTTTGC
TATTTTG---GCCTTTAGATGGTC--TGTATATTCCTTTTTTTGAGGTTACATAGTTTTGCAATATGCACCGGT------
------TTGGTATAGCTGTGGTATGATGTTAGTATATGCTTGATTCTTTAGGCCATTTTAACA--ATACTAACTAAGCGA
TATTAGATAATGCTTGCCTTAAGATGTCTTAAAATCACTTGTGCAATGGGCTAATATTACGTGGTGTTTACGACCATACA
AAGTATAGAACATGTATAGGAGCTTGGCCTCTGTACTTCATTTATCCTGAAATATTATCAAAAACCAATCAAGCCTGGAA
TTTTAACTTCTCATTTCTTAAGTCATTATTTTTGCTGAATCTATGTATGTGATTGTCTGTACTGAAACTTATGCATGAGA
TTGTAATACTTG---TTTTTTTTTCCTGAATGTTGCTTAGTGTTTTTTTTTCTTGGACACAAATGGATGTACATTTTACA
CAGCCAGGTATTGTTGAGGTTATACTACAAATGGCTAGTCCAAGCTAACGCTTGATAATTTGGGCCTGCGTGTCAGGCAT
TTTTCCTTGTATGATCAGATTTTTTGTTTTACTGAAATACAAACTATGAAATGGAAACATGTTGCTCTGCAAATATATAC
AATGCCATTTAAGCTCTATTGGCTGTAGCTTTTGATT------AAAAAAAACCTATGTTGCTGGACAAAGTTAATTTTTT
--TATTTCTGAGTGCACATAACATTTGACTAACAAATGGTAATAAAATGTTCTGATGCTGAATTACCTCTACTATATCCT
GATCCTTCCTCCGTTTCCTTGATCCAGAAA
>chr1D_1270
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--------------------CGGTATCCAAGGTGCTTGAAGACGACGACCTCCTCAGGGAGATTATTG---------TCC
GTGTCGGCTTCCCCACCACCCTCGTACGTGCTTCCCTCGTCTGCAAGCGCTGGTACCACCACATCTCTGACCGCCGGTTC
CTCCGCCGCTTCCGCGAGCGCCACCCGCCCCGCCTCCTTGGCTTTTGCCATGTCCCCGAAGATGAATGTTCACAGTTGTC
CTG---TCCACGCTTCGTCCCTATTTCGCCTCAGCCCCCAGAGCTCGCTGCCATGGTCAGCCGCGTGGCGAGCTACAGCT
TTGGCGTCGACGGCGACGA---ATGGATCAGGGAGTGCCGGCGCGGCAGTGTCTTGACCGGACGCTATGAAGGATTATTA
TGGAGACATAGAGTGCACCACCCACTGTGCTCTGGGAGAGACATGGACATCCTCCCACCACTCCCAAGCGTCCAGAAGTC
CAGGTACCACATGTTCACTACAATCCTCTCCAAAGAAGATGGCGCCGGCGGCTTGTCCTACATGTACATGTTGGTGGAGG
GGGTTGATGAGAATAAAGTTTTTAGGGTGCGCGTGTATATGTTGCAACGCGGTGTCTGGTGCATGCACACCTCATCTATC
ACACATATCCCTCTTCCGCTGTTGCCACGGAAAGTTGTGCTTGTTGACGATAAAATCTATATAGCTGACAAGTTCAGTGA
CGACATTATTGTCTTGGATTTGCCAGCCTCAAGTTTCTCCAAAATTTCGGTCCCACAGGGAGTGCAGTATCACCATTATA
CCACCATCTTGTCACGAGCCGATGATGCATCCGGTGTATATCTCACCCATGTTCATGTCAAGGAGCTTCAGCTTTGTATC
TGGCTCCACAAGGGGCACAACTGGTTGCTGGTCGATACCATTTGTTTGCGTCAGATGTGGGCTAATTTGAGGATGCTAGA
TCATACGGTTGAGGATGAGGATGTTGATTTTCACTTCTTAAGCCACGTGGGGGATAATGCTGAGTTTGTGTTCTTGGA--
-AATGTCTAATTGCACACTCCATCTGGACGTCACGAGCAGGACACTACGTAAAGTGGATGGGACGCCGTTAAAGAATGGA
CATTTCGTTGATGTCCATCCCTTTATGATGATTTGGCCACCCAAATTCCCTCTGCTGAAGGATGCTACTGCAAGGTTTGC
TATTT----GGCCTTCATATGATC--------------------------------------------------------
------------------------------------------------------------ACA--ATACTAGTTAAGTGA
CATTAGATAATGCTTGCCTTAAGATGTCTTGAAATCACTTGTGTACTCGGGTAATACTACTTGCTTATTGCTACCTACAA
AAGTATAAAACATGT-----------------------------------------------------------------
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>chr6B_1274
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------------------------ATCCGAGGTGCTTAACGACGACAACCTCCTCATCGAGATCCTC---------ATCC
GTGTGGGCTTCCCTACCACCCTCGTCCGCGCCGCCCTCGTCTGCAAGCGCTGGTACCACCACGCCTCAGACCGCGGGTTC
CTCTGTCGTTTCCGCAAGCGCAACCCACCCCGCCTCCTTGGCTTATACATCGACGTAAGGTGGACCTGGTTGGGGTTGTA
CGCTACTCCGCGCTTTGTCCCAATGCAGCCCCAGGCCCCGGAGCTTGACACCGTTGTCCGCCGCGTGGCGAGCCATAGCT
TCGACGCCTACGGTGACGGAATATGGATCATGCACTGCCAGAATGGTAGCATCTTCACCAGATACCGCAAAGGAACAGAA
GTGACACATGGAGTTTACCGCCCATTGTGCCCTGAGAGAGACATGGACTTCATTCCACCACTCCCAACCGCCCAGAACCA
CATGCAAAAACTTCTTGGTGCAATCCTCTCCAAAGAAGAAGGTGAT---GGGCTGTCCTACCTGTATGTGTTGGCGGAGT
GTACCACGCAAACAAAAACTTTCAAGGTGCGTGTGTATATGTTGCAAGGCGGCGTCTGGTGCATGCATACCTCGGCCACA
ACACAACTCCCTCATATGCTGCCTGCACTGAAAGCAGTGCTTGTTGACGATAAAATTTATATGGCTGACGTCTTCAGTAA
TGACATTATTGTCTTGGATTTGGCGACCTCGAGTTTTTCCAGAATTCTGCTCCCACAAGGAGTGAAGTATCACACTCTTC
ACACCATCTTGTCTCGGGCTGATGATGCTTCCGGTCTATATCTCATCCATGTCCATGTCAAGGAGCATCAACTTTGCATC
TGGCTCCACAAGGGGGACAACTGGTTGCTGGTCGATACCCTTTGTTTGCATCAGATGTGGGCTAATTTGAGGATGCAAGA
TCACACGCTCGAGGACGAGGATATTAGTTACGCCTATATAAGCCAGGTGGGAGATAATGTTCAGTTTGTGTTCTTGAAGA
CAATGTGTGGACGCATACTCTATCTGGACGTCACTAGCAGGACACTACATAAAGTGCATGGGATGACAGAAAAGGATCGA
CATTTCAGTGCTATCTATCCTTTTATGATGATTTGGCCGCCCATATTCCCTGCGCTCAAGGATGATCAAGCAAGGTTTTC
CCTTT----GGCCTTTACATGATC--TATGTATTGCTCTTGTTGAGGCTAGTTTGTTTTGC-------------------
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>chr6A_1274
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------------------------ATCCGAGGTGCTTAACGATGACAACATCCTCATCGAGATCCTC---------ATCC
GTGTCGGCTTCCCTACCACCCTCGTCCGCGCCGCCCTTGTCTGCAAGCGCTGGTACCACCTCGCCTCAGACCGCGGGTTC
CTCTGCCGTTTCCGCAAGCGCAACCCACCCCGCCTCCTTGGCTTATACATCGACGTAAGGTGGACCGGGTTGGGGTTGTA
CGCTACTCCGCGCTTTGTCCCACTGCAGCCCCAGGCCCCGGAGCTTGACACCGTTGTCCGCCGCGTGGCGAGCCATAGCT
TCGACGCCTACGGTGACGGAATATGGATCATGCACTGCCAGAATGGCAGCATCTTCACCAGATACCGCAAAGGAACAGAA
GTGACACATGGAGTTTACCGCCCATTGTGCCCTGAGAGAGACATGGACTTCATCCCACCACTCCCAACCGCCCAGAACCG
CATGCAAAAACTTCTTGGTGCAATCCTCTCCAAAGAAG---GCGAT---GGGCTGTCCTACCTGTATGTGTTGGCGGAGT
GTACCGCGCAAACAAAAACTTTCAAGGTGCGTGTGTATATGTTGCAAGGCGGCGTCTGGTGCATGCATACCTCGGCCACA
ACGCAACTCCCTCATATGCTGCCTGCACTGAAACCTGTGCTTGTTGACGATAAAATTTATATGGCTGACGTCTTCAGTAA
TGACATTATTGTCTTGGATTTGGCGACCTCGAGTTTTTCCAGAATTCTGCTCCCACAAGGAGTGAAGTATCACACTCTTC
ACACCATCTTGTCTCGGGCTGATGATGCTTCTGGTCTATATCTCATCCATGTCCATGTCAAGGAGCATCAACTTTGCATC
TGGCTCCACAAGGGGGACAACTGGTTGCTGGTCGATACCCTTTGTTTGCATCAGATGTGGGCTAACTTGAGGATGCGAGA
TCACACGCTTGAGGACGAGGATATTAGTTACGCCTATATAAGCCAGGTGGGAGATAATGTTCAGTTTGTGTTCTTGAAGA
CAATGTGTGGACGCATACTCTATCTGGACGTCACTAGCAGGACACTACATAAAGTGCATGGGATGGCAGAAAAGGATCGA
CATTTCAGTGCTATCTATCCTTTTATGATGATTTGGCCGCCCATATTCCCTGCGCTCAAGGATGATCATGCAAGGTTTTC
TCTTTTGAAGGCCTTTACATGATC--TATGTATTGCTCTTGTTGAGG---------------------------------
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>chr6D_1280
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------------------------------GGTGCTTAACGACGACAACCTCCTCATCGAGATCCTC---------ATCC
GTGTCGGCTTCCCTACCACCCTCGTCCACGCCGCCCTCGTCTGCAAGCGCTGGTACCACCACGCCTCAGACCGCGGGTTC
CTCTGCCGTTTCCGCAAGCGCAACCCACCCCGCCTCCTTGGCTTATACATCGACGTAAAGTGGACCGGGTTGGGGTTGTA
TGGTACTCCACACTTCGTCCCAATGCAGCCCCAGCCCCCGGAGCTCGACAACGTTGTCCGTCGTGTGGCAAGCCATAGCT
TCGACGCCTACGATGACGGAATATGGATCATGCACTGCCAGAATGGCAGCATCTTCACCCGGTACCATAAAGGAACAGAA
GTGACACATGGAGTTTACCGCCCATTGTGCCCTGAACGAGACATGGACTAAATCCCAACACTCCCAGCCGCTCAGAACTG
CATTCAAAAACTTCTTGGTGCAATCCTCTCCAAACAAGAAGGCGAT---GGGTTGTCCTACCTGTATGTGTTGGCGGAGT
GTACTAGGCAAACAAAAACTTTCAAGGTGCGCGTGTATATGTTGCAAGGCGGCGTCTGGTGCATGCATACCTCGGCCACA
ACACAACTCCCTCATACGCTGCCGGCACTGAAAGCTGTGCTTGTTGATGATAAAATTTATATGGCTGACGTCCTCAGTAA
TGACATTATTGTCTTGGATTTGGCGACCTCGAGTTTTTCCAGAATTCTGCTCCCACAAGGAGTGAAGTATCACACTCTTC
ATGCCATCTTGTCTCCGGCTGATGATGCTTCCGGTCTATATCTCATCCATGTCCATGTCAAGGAGCATCAACTTTGCATC
TGGCTCCACAAGGGGGACAACTGGTTGCTGGTCGATACCCTTTGTTTGCATCAGATGTGGGCTAATTTGAGGATGCGAGA
TCACACGCTCGAGGACGAGGATATTAGTTACGCCTATATAAGCCAGGTGGGAGATAATGTTCAGTTTGTGTTCTTGAAGA
CAATGTGTGGATGCATACTCTATCTGGACGTCACTAGCAGGACACTACATAAAGTGCATGGGATGACAGAAAAGGATCGA
CATTTCAGTGCTATCTATCCTTTTATGATGATTTGGCCGCCCATATTCCCTGCGCTCAAGGATGATCAAGCAAGGTTTTC
CCTTT----GGCCTTTACATGATC--TATGTATTGCTCTTGTTGAGGCTAGTTTGTTTTGCA------------------
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>chr1A_2079
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--------------------------------------------------ATCCATGCCAAGAAGCTTCAGCTTCACATC
TGGCTCCACAAGGGGGACAACTGGTTGCTGGTGAACACCATTTGTTTGCGTGACATGCTTGCTAATTTGAGGATTCCAGG
TTGTGAGGTTGATGATGAGCCCACTGCTCCTCTCCGGATAAAACATGTGGGGGACTCTGCTGAGTTTGTGTTCTTGGA--
-GATGGGTCGATGTGCACTCCACCTGGATGTCAAGTGCACGCAGTTGCGTAAAGTGTATGACATGACAGAA---GAACTG
CATTTGGGTGATATACATCCTCTTATGATGATTTGGCCGCCCATATTCCCCGCGCTCAAGGATAATCCTGCAAGGTTTTG
CCTTTTG---GCCTTCAGATGATTTTTGTATTTTGCTTTTGTTGAGGTTACATAGTTTTTGCAATGCACACCACTCACTG
CACTGCTTGGTATAGCTACGGGGTGGTGTTAGTATATGATCGATTTTTTGGGCCATTTTAACAGTATACTAGTTCAGCAA
CTTTAGATAATGCTTGCCCTAAGATGTCTTGCAATCACTTG---------------------------------------
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>SNPs
-------S------------------------S-------S-----S----SS-----------------S---------
------------S-S--------S--S-S-S-SSSS------S-----S------------S------------S-----
------SS-S---------S--------SS-----------------------------------S--------------
---S--------S----S-------S-----------S--------------------------------S---------
-------------------------------------------------------------------S------------
----S-S-----------------------S-------S----SS---SSSSS-----------S-S---S---------
--SSS----------S--S-------------------------------------------------------------
-------------------------------------------------S--SS------S-------------------
-------------------S-S--------SSSSSSSSSSS---------------------------------------
----------------S------------S--------------------------S-SS-SSSSSSSSSSSSSSSSS--
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S-S-----------------------------------------S----------S------------------------
-----------------------------SSSS----------------------SS--------S--------------
--------S----------------------S----------S---------S--SSS----------------------
-------S---------S--------------------------------------------------------------
----------------------------------------------------------S---------------S-----
--------------------S----------------------------------------------------------S
----S------------------------S--------------------------------------------------
--------------------------------S-----------------------------------------------
--------S------------------------S---------------------S-------------S----------
---------------------S----------------------------------------------------------
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-------------------------------S--S--------------S------------------------------
-------------------------------S------------------------------------------------
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----------------S---------------------------------------------------------------
----------------------------------------------------------------------S------S--
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---------------------------------S----------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------------------------S-S--------------------------
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------------SSS-----------------------------------------------------------------
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-------------------S------------------------------S---------------------S-------
SS----------------------------S-------------------------------------------------
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>forward_1083
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-----------------------GCTGAGGGCACTCCAATAGC-------------------------------------
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>reverse_2177
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----------------TGCCGGTGATGCTTCTGG----------------------------------------------
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>forward_1128
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--------------------------------------------------------------------GAGGAGATTTCC
CAGCGGTG------------------------------------------------------------------------
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>reverse_2311
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----------------------------------------------------------------------TGATGCTGGA
TCAGACCTTGAG--------------------------------------------------------------------
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>forward_2177
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-----------------------------------------------------------------------------TTC
GCACCATCATGTCACGT---------------------------------------------------------------
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>reverse_3251
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--------------------------------------------------CCCTATGTTGCTGGACAAAGT---------
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------------------------------
