>input_sequence_56869
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---------------------------------------------ACTACTCCGATCCTTCTCTCCTAGCTAGCTGCCAT
ACCACAGCACGTAGTACGTTCTAGCCTCTTCTCCACTTAATAGCTGTTATGGAACAGACGAATGTCAGGTTGCCCCAGCT
GGCCAAGATAGCAGCGCTCCTCCTCCTCTTCCTCCTCGTCCCCATGGTGCCTCCTTCTCTGAGGGCCCCTTATCTCTACC
TCCTCTTCAACGCCCTCGTCGTCGGCCTTGGTGTCCAGGCCGGCATCATCTCCGTCTCAAGCCGGAGCAACTTAACAGCC
CAGCCTCCTGCCCCTGCCCCTGC---TGCTGCTGTAACTCCCAACCACCATCACCACCTTGTCACTTCACAGCCGCCGAT
CATGGCGGCCCCCTTGCCAGGACGACTCAGGGAGGTAAATCTGCTTGCAGATCGTGGTGCTGTCAACAACGTCGTGGCCG
TGGCCAAGAAACTGAAGGAGACGATCAAGAAAGTCCCGTCCAGGGCGAGCATCTTCTTCATCGGGAGCCTGGACCCCCAT
GACGCCGGCGAGGTCGTGGACGCGACGTCAAAGACGCTCCACGACAA---------GGAAGGGCGGCAAAGGTGCAAGGT
AGACGCCTCCTCCGGGGATCTCATGAGCAAGCAGGAACTTTACGCCAAGGCCGACGCCTTCATCGGCAACTTCTACAAGC
AGCTCAAGATGCAGAGGGAGGAGTCATGGAACAAGCTGCAGGACCTGTGCAGCTACCACCACCACCACAACTACAAGGCC
AAGGCCTTCTAGAGATTCTCGATCCATGTACGTATATCTAGAGTCTAGATGCATGGCTAGCATCTATATATATGTACGTG
CATGCATATGCATGCAGATAAACTGTGCATGTTTGTTGGCACGTAGGGTATACTGAGGACTGAGCTGAGCAGTGGAAGGA
GCCCAGAGGAACCAACAGATATTACGTTGTTTGGTTCCT-CATTCTTAATTTACCTTCATCGACCCATTGATTTGTTTTG
GGTTAGAAGATCATAGGAGTCCTTTCCCCTGAAGTATATATATGGACAGTCG--TATACACATGTTCTTAACTATATGGC
TCGTCTATTGGTAAGTCACCTGAGTTTTCTATTTGGTGTAAGTCATTTTTCTTTTCACTCCGTGCTACTAC-TTTTTTCT
CTATCTACACATGCAAGCTGGCATAACGTTTTTCTCTATCTAACCATGTATGGAAAAATGTTTTCTATAAATTACTCTAC
TTATATTCAATAAA------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G445300
CAAGGTGGGAGCGCTAGCCGACATGCAAATGCAATACAAATGTACTACTACGTAGCAGCGAATGAAATCCCACCCTCCAT
CAGGATTCACGAGAAAGCGCCCGGCCGGCTGGAATATCCCACCGGCCATGCCCTACGTGGCTCCACAACACGCGCGCATC
ACCGTCGCCCGATCGGAAAGAG--CTACTATTCCTACCTCCAGTGCCATGTCGATCTTTTGGGCGTAGCTCACATGGCAT
CTGTTCATGTCGCCGTTGATGCAACGACGCAAAAGCTTAGCATTTCGCTCTCAGATCCGACGTAAGAAACCACCTCGAGC
TTATCTTCTCCGACCCTTCGTTGTCTAC--TAGTCCCTCCGTTCACAAATATAAGATGTTTTAGATATGGTAATATGGGC
TACATATATACTGAAATGAATGAACGACAT----------ATAAAATATGTTTATACACATCCGATTTAGAAAAAAGGTT
AGCAGAACATCTTATATTTGTGAAGAGGAGTGGGGCGTTTTGGTGACCAGGCGACATGGAGCCCGAAATTTTTG----AA
AAATTCAAAATTCAAACTTTTTGATTTCAGAAAAAATCTAAAAATAATTGAAAAAATCTAAAAATATGCATTCAAGTGTA
CAAGGATGAAATGTATATGTGTGTAAAAATTCACGATGAAATAACTTGACATGCGACCTGTAAAAAAACAAATTCATGGA
CTTTGAGAATGAATAGCTAA------------------------------------------------------------
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------TATCATATGTTGATAGGTCCCAGATTTTTTAACAACCTCATTTCAATGTATTCCGTTCAGAAAATTTACACA-C
GTGTATATTATGCCTCCATTTATATTTGTATCTTTTCAATTATTTTATAAAACATAAAAATATGAAATTTAAAAATTGCA
AATGGAGGCCTCTCCGAAGCTCGGCCTCCAAAATCAATTTTCATGTGAACGCGGAGGCTAGCTAGCTACCCACCACGGTC
GTGCAGTCTATAAATACACGGCCAGGGACTAGAGGCCAATACTACACTACTCCGATCCTTCTCTCCTAGCTAGCTGCCAT
ACCACAGCACGTAGTACGTTCTAGCCTCTTCTCCACTTAATAGCTGTTATGGAACAGACGAATGTCAGGTTGCCCCAGCT
GGCCAAGATAGCAGCGCTCCTCCTCCTCTTCCTCCTCGTCCCCATGGTGCCTCCTTCTCTGAGGGCCCCTTATCTCTACC
TCCTCTTCAACGCCCTCGTCGTCGGCCTTGGTGTCCAGGCCGGCATCATCTCCGTCTCAAGCCGGAGCAACTTAACAGCC
CAGCCTCCTGCCCCTGCCCCTGC---TGCTGCTGTAACTCCCAACCACCATCACCACCTTGTCACTTCACAGCCGCCGAT
CATGGCGGCCCCCTTGCCAGGACGACTCAGGGAGGTAAATCTGCTTGCAGATCGTGGTGCTGTCAACAACGTCGTGGCCG
TGGCCAAGAAACTGAAGGAGACGATCAAGAAAGTCCCGTCCAGGGCGAGCATCTTCTTCATCGGGAGCCTGGACCCCCAT
GACGCCGGCGAGGTCGTGGACGCGACGTCAAAGACGCTCCACGACAA---------GGAAGGGCGGCAAAGGTGCAAGGT
AGACGCCTCCTCCGGGGATCTCATGAGCAAGCAGGAACTTTACGCCAAGGCCGACGCCTTCATCGGCAACTTCTACAAGC
AGCTCAAGATGCAGAGGGAGGAGTCATGGAACAAGCTGCAGGACCTGTGCAGCTACCACCACCACCACAACTACAAGGCC
AAGGCCTTCTAGAGATTCTCGATCCATGTACGTATATCTAGAGTCTAGATGCATGGCTAGCATCTATATATATGTACGTG
CATGCATATGCATGCAGATAAACTGTGCATGTTTGTTGGCACGTAGGGTATACTGAGGACTGAGCTGAGCAGTGGAAGGA
GCCCAGAGGAACCAACAGATATTACGTTGTTTGGTTCCT-CATTCTTAATTTACCTTCATCGACCCATTGATTTGTTTTG
GGTTAGAAGATCATAGGAGTCCTTTCCCCTGAAGTATATATATGGACAGTCG--TATACACATGTTCTTAACTATATGGC
TCGTCTATTGGTAAGTCACCTGAGTTTTCTATTTGGTGTAAGTCATTTTTCTTTTCACTCCGTGCTACTAC-TTTTTTCT
CTATCTACACATGCAAGCTGGCATAACGTTTTTCTCTATCTAACCATGTATGGAAAAATGTTTTCTATAAATTACTCTAC
TTATATTCAATAAATATTTTTGCAACTATACATTATACATGATCAAATATAGTAAGTCATATGTATTTTTAATTTGGTTC
TTACGTTATCCACCCAAATTTTTATTAATCAATTACCGCAGCAAGACGCATGGTATCTGTTGAACATGCAAGTGTACATG
TACGTAGGTCTGGGTTTTGTATGCCGCACCTGTAGTGTCTCTCTCCCTCTGTATTTACTTGTATCTTGGGAGACAAGACA
CCGATCGCACCTCTTGTACCTATATATATGTGCCTAGTGCACGATCAATCAATCATCGATGCACCAAATCATTCTCTACA
TGGTATCTATCGCAAGTCGATCCTCTCCCGCTTCCGCCTAACCCTAGCCGCCGCCGCCGCCGCGATCTGCCGCTGCCCCA
CGCCGCTGCCGCCTCCCCGCGCCGCGACGCCCACT---------------CCCGCTAGCCGCCTGCCCGATCTCCATCTC
TCTAGTCGCGTCGTGCACAGCCAGCCAATCCCGGTCGCATCGCGCCTCATCCCGTCTCGCAGCTAGCCACCCATCCCGC-
CTCGCTACCCGCGCCGTCCGCCAGCCAGCCGCTCCCGCTAGCCACCCGTGCCACCCCATCCCGCCTCGCTACCCGCGTCG
TGTGTCCGCTTGCTTCCTGCCACGCGCCGCACCACTAGCTTCGCTCGCTAACCGCACTGTGCGCCCGCCAGCTGATCCCG
ATCGC-------ATCGCTCGCGCCGCTCGCTAGCTTCGCTCGACGCCGATGCTCGC------------------------
-----CTGCATCGCTGCGCCACACCTCTGCCGCGCCGCATCACCGCCATGTCTTCCTCCGCCTCCTCCTACTCCAACCCC
TTCGCTGGACCGGACCCCACTAACATCCGCGACATCAACATCCACGACCGCGTTCCCGTCATCCTCGACGCCATCGATGC
CACGTACTTCGCGTGGAAGACGTACTTCTCGCTGCTCTTCCGCGAGAACAACCTTGAGGATCACGTTGACGGCTCCGTCG
ACTCCCGTGCCATGGTGGGCGACTCC
>chr7A_1
CAAGACGGGAGCGCTAGCCGACATGCAAATGCAATACAAATGTACT-------AGCAGCGAATGAAATCCCACCCTCGAT
CAGGATTCACGAGAAAGCGCCCGGCCGGCTGGAATATCCCACCGGCCATGCCCTACGTGGCTCCACAACACGCGCGCATC
ACCGTCGCCCGATCGGAAAGAGTACTACTATTCCTACCTCCAGTGCCATGTCGATCTTTTGTGCGTAGCTCACATGGCAT
CTGTTCATGTCGCCGTTGATGCAACAACGCAAAAGCTTAGCCTTTCGCTCTC-GATCCTACACAAGAAACCACCTTGAGC
TTATCTTCTCCGACCCTTCGTTGTCTAC--TAGTCCCTCCGTTCACAAATATAAGATGTTTTGAATATCTTAATATGGGC
TATATATGTACTAAAATAAATGAACGTCAC----------ATAAAATGTGTTTATACACATCCGATTTAGAAAAA-GTTT
AGCAGGACATCTTGTATTTGTGAACGGGAGTGGGGCGTTTTGGTGACCGGGCTAGATGAAGCCCAGAATTTTTGAAAAAA
AAATTCAAAGTTCAAAATTTTTAATTTCAGAAAG------------------AAAATCTAAAAATATATATTCAAGTGTA
AAAGGATGAAATGTATATGTGTGTAAAAAATCAGGATGAAATACCATGACATGCGACATGTAAAAAC-CAAATTCACAGA
CTTTGAGAATAAATA----A------------------------------------------------------------
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------TATCATATGTTGAAAGGTCCTACATTTTTTAACAACCTCATTTCAATGTATCTCATCCAGAAAATTTACACATC
GTGTATATTATGCCTCCATTTATATCTGTATTTTTTCAATTGTTTTTTAAAACCTAAAAATATGAAATTTAAAAATTGCA
AATGGAGGCCACCCCGAAGCTCGGCCTCCAAAAGCAATTTTCGTGTGAACG--GAGGGTAGCTAGCTACCCACCACGGTC
GTGTAGTCTATAAATACACGGCCA---ACTAGAGGCCAATACTACACTACTCCGATCCTTCTCTCCTAGCTAGCTGCCAT
ACCACAGCACGTAGTACGTTCTAGCCTCTTCTCCAACTAATAGGTGCTATGGAAAAAACGAATGTCAGGTTGCCCCAGCT
GGCTAAGATAGCCGCGCTCCTCCTCCTCTTCATCCTCGTACCCATGGTGCCTCCTTCTCTGAGGGCCCCTTATCTCTACC
TCCTCTTCAACGCCCTCGTCGTCGCCCTTGGCGTCGAGGCCGGTTTCCTCTCCGTCTCAACCGGGACCAAGCTAACAGGC
CAGCCTCCTGCCG------CTGCCGCTGCTGCTGTAATTCCCAACCACCATCACCACCTTGTCACTTCACAGCCGCCGAT
CATGGCGGCACCCTTGCCAGGACGACTTAGGGAGGTAAATCTGCTTGCAGATCGCGGTGCTATCAATGAGGTGCTGAGCG
TGGCGAAGAAACTGAAGGAGGAGATCAAGAAAGTCCCGTCCAGGGCGAGCATCTTCTTCATCGGGAGCGCGGACCCCCAC
GACGCCGGCGAGATCGTCGATGCGACGTC---GACGCTCCAAGACAATCAGGCGGGGGAAGGGCGGAAAAGGTGCAAGGT
AGACGCCTCCTCCCATGATCTCATGAGCAAGCAGGAACTTTACGCGAAGGCCGACGCGTTCATCGGCAACTTCTACAAGC
AGCTCAAGATGCAGAGGGAGGAGTCGTGGAACAAGCTGCAGGACCTGTGCAGCTACCACCACCACCACAACTACAAGGCC
AAGGCCTTCTAGAGATTCTCGATCTATACGTACGTATCTAGAGTCTAGATGCATGG-TAGCATCTATATATATGTGCATG
CATGCATGTGCAGATACGCTG--TT----TGTGTGTTGGTACGTAGGGTAACTTT--------GCTGAGCAGTGGAAGGA
GCCGAGAGGAACCAACAGATATTATGTTGTTTGGTTCTCACATTCTTAA-TTACCTTCATCGACCCATTGATTTGTTTTG
GGTTAGAAGATCATAGGAGTCCTTTCCCCTGAAGTATATATATGGACAGTCG--TATACACATGTTCTTAACTATATGGC
TCGTCTATTTGTAAGTCACCTGAATTTTCTATTTGGTATAAGTCATTTTTCTTTTCCCTCCGTGCTACTAC-TTTTTTCT
CTATCTACACATGCAAGCTTGCATGACGCTTTTCTCTATCTAACCATGTATGGAAAAATGTTTTCTATAAATTACTCTAC
TTATATTCAATAAATATTTTTGCAACTAT-------ACATGATCAAATATAGTAAGTCATATGTACTTTAAATTTGGTTC
TTACGTTATCAACCCAAATTTTTATTAATCAATTATCGCAGCAACAAGCATGGTATC-----------------------
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>chr7B_54
-----------------------------------------------------AGCAGCGAATGAAATCCCACCCTCGAT
CAGGATTCACGAGAAAGCGCCCGGCCGGCTGGAATATCCCACCGGCCATGCCCTACGTGACTCCACAATACGCACGCATC
ACCGTCGCCCGATCGGAAAGAG---TACTATTCCTACCACCAGTGCCATGTCGATCTTTTGTTCGTAGGTCACATGGCAT
CTGTTCACGTCGCCATTGATGCAACAACGCAAAAGCTTAGCATTTCGCTCTCAGATCCTACGCAAAAAACCACCTCGAGC
TTATCTTCTCCCACCCTTCGTTCTCTGCTATAGTCCCTCTGTTCACAAATATAAGATGTTTTAAATATTTCAATATAGAC
TATCTACGGACTGAAATGAGTGAACAACACATAAAATGACATAAAATGTGTTTATACACATTCAATTTAGAAAAA-GGTT
ACTAGAACATCTTATATTTGTGAACAAGAGTGGGGCGTTTTGGTGACCGGATTCCATGGAGCCCGGAATTTTTGT-----
AAATTCAAAATTCAAACCTTTTGTTTTCAGAAAAA---------------------TCTAAAAATAT--ATTCAAGTATA
CAAGGATGAAATGTATATGTGTGTAAAAATTCAGGATGAAATACCTTGACATGCTACCTGTAAAAAAATAAATTCATTGA
GTATCATATATTTTTTTTAGAAAAGGAGGAAGACCCCCGGCCTCTGCATCTGGGCGATGCATACAACCATTTTATTAATT
ATTAACACAAAACCTTACAAAGTCATACAACAATAAGACTAAAATCATCGTCTAAGCAACATCTGTCGCTACTCCTATCC
ATTTGATGAAGGGCGCTGATAGTCTGAGCGTAATATCAAACGGACCTCGCAGCCAAACCTAACATCTAAGACCTGAGGAA
ATTGAGTATCATATGTTAAAATGTATCTGATTTTTTAACAGCCTCATTTCAATGTATTTCGTTCTAAAAATTTACACATA
-TGTATATTATGCCTTCATTTATATCTGTATTTTTCAGTT----------AACGTAAAAATATGAAATTTAAAAAATGCA
AATGGACGCTTCCCTGGAGCTCGGCCTCCAAAAGCAATTTTCGTGTGAACG--GAGGGTAGCTAGCTACCCACCACGGTC
GTGCAGTCTATAAATACACGGCCAGGGGCTAGAGGTCAATACTACACTACTCCGATCCTTCTCTCCTAGCTAGCTGCCAC
ACCACAGTACGTAGTACGTTCTAGCCTCTTCTCCACTTAATAGCTGTTATGGAACAGACGAATGTCAGGTTGCCCCAGCT
GGCCAAGATAGCAGCGCTCCTCCTCCTCTTCCTCCTCGTCCCCATGGTGCCTCCTTCTCTGAGGGCCCCTTATCTCTACC
TCCTCTTCAACGCCCTCGTCGTCGGCCTTGGTCTCCAGGCCGGCATCATCTCGGTCTCAAGCCGGAGCAACTTAACAGCC
CAGCCTCCTGCCC------CTGC---TGCTGCTGTAACTCCCAACCACCATCACCACCTTGTCACTTCACAGCCGCCGAT
CATGGCGGCCCCCTTGCCAGGACGACTCAGGGAGGTAAATCTGCTTGCAGATCGCGGTGCTGTCAACAACGTCGTGGCCG
TGGCCAAGAAACTGAAGGAGACGATCAAGAAAGTCCCGTCCAGGGCGAGCATCTTCTTCATCGGGAGCGTGGACCCCCAC
GACGCCGGCGAGGTCGTGGACGCGACGTCAAAGACGCTCCACGACAA---------GGAAGGGCGGAAAAGGTGCAAGGT
AGACGCCTCCTCCGGGGATCTCATGAGCAAGCAGGAACTTTACGCCAAGGCCGACGCCTTCATCGGCAACTTCTACAAGC
AGCTCAAGATGCAGAGGGAGGAGTCCTGGAACAAGCTGCAGGACCTGTGCAGCTACCACCACCACCACAACTACAAGGCC
AAGGCCTTCTAGAGATTCTCGATCTA--CGTACGTATCTAGAGTCTAGATGCATGGCTAGCATCTATATATT--TGCATG
CATGCATATGCAGACACGCTG--TGTGCGTGTGTGTTGGTACGTAGGGTAACTTT--------GCTGAGCAGTGGAAGGA
GCCGAGAGGAACCAACAGATATTATGTTGTTTGGTTCCT-CATTCTTAA-TTACCTTCATCGACCCATTGATTTGTTTTG
GGTTAGAAGATCATAGGAGTCCTTTCCCCTGAAGTATATATATGAATAATCGCATATACACATCTTCTTAACTTATATGG
GT---TATTTGCAAGTCACCTGAATTTCTC-TTTCGTGTAAGTCATTGTTCTTTTCACTCCGTGCTACTAGTTTTTTTCT
CTCTATCTACATGCAAGCTTACATAACCTTTTT-----------------------------------------------
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>chr7A_2353
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-----------------------------------------------------TATGTGTTGAACAT----GTGTACATG
TACGTAGGTCTGGGTATTGTATGCCGCACCTGTAGTGTCTGTCTCCCCCTGTATGTACTTGTATCTTGGGAGACAAGACA
CCGGAGGCACCCCTTGTACCTATATATATGTGCCTAGTGCACGATCAATT-ATTATCGATGCACCAAACCATTCTCTACA
TGGTATCTATCGCAAGTCGATCCTCTCCCGCTTCCGCCTAACCCTAGCCGCTGCC-------------------GCCTCG
GGCCGCCGCCGCCTCCCTGCGCTGCGCCTCCCTTCCCACGTGCGCCGTGCCCCGCTAGCCGCCACCACGCTTCCCTTCCC
GCGCGCGACCCGCTAGCG------------------------------ATCCCGTTCCTGATCCCGCTAGCGATCCCGAT
CTCGCTACGCTCGCCCGATCCGCCCACAACCCGCCG------CCCGCTTGCTACGCTCGCCCGACCCGTAACCTGC----
-----------------------------CAGCACTTGCCTCGCTAGCCGTCCACTTTGCTCACTCGCGCGCGCCCCTAG
TCAGCCTGCTCGATCCCTCGCGCCGCTCGCTCGCATGCGCCCCCAGCCATGCTGCTCGCTCCCTCGCGCTGCTTGCTGCC
TGCTGCTGCATCACCGCGCTGCACCACCGCCGAGCCG--------CCATGTCTTCCTCCGCCTCTTCCTACTCCAACCCT
TTCGCCGGGCCAGACCCCACTGACATCCGTGACATCAACATCCACGATCGCGTCCCCGTCGTCCTCGATGCCACCGACGC
CACATACTTCGCGTGGAAGACGTACTTCTCGCTGCTCTTCCGCGAGAACAACCTCGTGGATCACGTTGACGGCTCCATCG
ACTCCCGTGCCATGGTGGGCGACT--
>SNPs
----SS----------------------------------------SSSSSSS------------------------S--
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
-------------------------S--------------------------------S---S-----------------
---------------------------------------------------------------S----SS----------
--S----S---------------------S-----------------S---------------------------S----
------------------------S-----------------------S---S------------S--------------
-----------------------------------SSSSSSSSSSSSSSSSS---------------SS-----------
---------------------------------S---------S---------------------------------S--
----------S----SS---------------------------------------------------------------
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-------------------S--------------------------------------S---------------------
-------------------------S-----S---------S----S------S--------------------------
------------S--------------------S--------S--------SS----S----------------------
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-------------SSSSSS-------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------S----------S
------------------------------------------------------------------S-------------
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-------------------------S------------------------------------------------------
------------------------S--SSSSSSS-----------------------------------------S-S--
------------SS--SSSSSSS-----S---S------S----------SSS-SSSSSSSSS-----------------
---S--------------------S------------------------S------------------------------
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---------S-------------S--------------------------------------------------------
-------------------S------------------------------------------------------------
-----------------------------SSSSSSS-----------------------------S---S----------
----------S------------------------S--------S-S--------------------SSSS---------
---------------S------------------------S------S------S-------------------------
---SSS-----S-------------------------------------SS--S--------------S-----------
---------------------------------------------------S---SSSSSSSSSSSSSSSSSSS---S-S
S-----S----------S----S---S-S---SSS----------------------------SS-S--S-SS--S--S-
S-SS-SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------SS-SS-S-SS--S-S-S------S-
--------S-S----SSSSS-SSS-SSSS-S-S--SSSSSSS-S-S-S---S--S-SSS----S-S--SS---S--SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----S--S-----S--SSS--S-SS--SS-S-S---SS--SSSS-SS-
SSS------------S---------------S--S-SSSS-SS-SS-S-----SSS------------------------
------------S-S----SS----S-S----S----SSSSSSSS-------------------S--------------S
-----S--S--S---------S-------S-----------------S-----S------S-------S----S---S--
---S--------------------------------------------------S-S-------------------S---
------------------------SS
>forward_299
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---------------------------------------GCATTTCGCTCTCAGATCCG---------------------
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>reverse_2142
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-------------------------------------------------------------GAGCTGAGCAGTGGAAGGA
G-------------------------------------------------------------------------------
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>forward_1946
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------AGATGCAGAGGGAGGAGTCA------------------------------------------------------
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>reverse_3318
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-------------------------------------CATCACCGCCATGTCTTCCT-----------------------
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--------------------------
