>input_sequence_56827
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-----------------------------------------------------ATGGGATGCTCCAGCTCGACGCTTGCG
CGCGGCGGCGTAGACATGTCGGCGCTGCCGGCGCCGGCGCGGCCAGAGAGGCGGCATAGCCTTCCTTCACGCGCCGCCTC
GGCGCTGGGCTCCCACGGCCTCTGCCGCGGCCGGCACGACGGCCTGCACCCCTACACGAGGTTGCCGCTCGAAGAGACGG
TAAAGGGCGAAGCCGAATACGGAGCACCGTCAGCGGAGGCGAAGGCCGCTTCCTTCAGTGGGGATGCGGCGGCGTGGCCT
GCGGAGGGCCGCGCGCCGGTCAAGCTATCGCCGGCCGGAATTCTTGAGGGCGCAGCATCGGCAACGTCGAGCACAGCGCA
TTGGACCGCATCAGCGACTTCGAGCACGCCGCAATTTTCAGCTTCGCCGAGTTGGTTCCGTGGAGAATCATCGTCGCCGC
---CACCGCCGGTGCAGTTTGTGGCGCCTGACTTTGACCCAGCGATCCTGTCCCTGTTCCGCGAGGCCTTGGTGGGACAG
TCACCGTCTCACCCGGCGGTTCTCTTCCCAGAGAATGAGGCCACGACCCTGCGGGAGACGGCCGCCTTGGACGAGGCGGT
GCCGCCGGCCGCCCGGGACATGCCGGAGGTGACCGGCTTGGTTCGCGCGCGTGTCGACGAGTTCCACAAGAAGCTGGAGG
AGATGAAGGAGATGAAGGAAGCTGAGGCCCAGAGCGCCACCCGCGACGCCACGGACGAGGTGGCGGCGCCTCCTCCGAGG
AAGGCGGTGGTAGTGTACTTCACCAGCATCCGCGGCGTGCGCAAGACGTTCGCGGACGGCGCGGCCGTGCGCGCCATCCT
GTTCTCCTACCGCGTGCGCGTGGACGAGCGCGACGTGTCCATGCACGCCGCCTTCAAGGACGAGCTCCGCAACCTCGTCA
GCCTCGCCGCGGGGGGCGGGCACGTGCTCCCCCGCGTTTTCGTCTTGGGCGATGGCGAGCAGCAGCAAGACCTTGGGGGC
GCCGACGAGGTGAGCGCGCTGCACGAGAGCGGCGAGCTCGCTCACGCGCTGGCCGGGTGCGAGACGGTGGCGGCGCTCCT
CCCCCCGTGCGTCGGGTGCGGTGACTTGCGGTTCCTGCCCTGCGACAGGTGCTTCGGCAGCTGCAAGCTCTTCGCCGGCG
ACGAGGGTGGGTGCGTGGGTGACATGTTCGAGGAGTGCACGCACTGCAACGAGAACGGGCTCATCAGGTGCCCGGTCTGC
TGCCTCTGA-----------------------------------------------------------------------
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---------------------------------------
>chr3A_1_TraesCS3A01G340600
CGACGCCAGATCAGAGTCCCCAATGAACTGCCCTCTTTACCTCATACGCCAACGAGCGGCCTTTGGTAGCACCCTGCAGC
CGGCCAGGCAGGATCCATCAGTTGATCTTTGCAGCACCCTCACGGTGAATCCTTGTAGAGACCTCTCTGTCGAACATTGC
AACACCAGTGTCTGACTTGCAGCGTGTGGGCGACTCCTACGGCGACCAACAAGTAGCATTGACGCCGCGTATGCAGCACC
AGCGCCCCAGCTAGTGGTTGGCTTGCCCAGCCCGTCGGCGGCTTGCTACCGTGGGCGGAGCTTGCAGTAGCAGGAGCAGC
GTGGTGTTGTCGTGCTTGTTGCAATGGGTCGTTGACAGCAACAATGGTTGTGCGGTGGGTGTTGCTCAGGTCCTCGGATT
TGGTGGCCGGCGGCGAGTTTGTAGCATTGACCGTTTAGAACGAGAAGGATTGAGACAGAGAGAGAGAGAGACGAGAGCAA
GAGAAAAGGATGACGAACTAGGGATGTTTTGTAATCACTGATTGGGAGCCATGTGTAGGTGGAGATGGAAAGCGATGAAA
GAGAAGAATCAAGTGGCTCAAATCCATCCAAAAGGGCAAATCAGACGGCTAT-----CTAAGCGGTTGATCCTTGCACAA
CCAGCTAACGCCTAGCAGTCTTCCTTAAAAAATGATGATATTTTTGGTCTTGTCATATGGTTATCATATGGTCTTCTCCT
AAACACCATTTTTCCATGATAAAGAATTACCAAAATAACAATACTACATTTTATC---AAATAAATAAATA---AATAAT
ACTACATTTATCCAAAAATAATAAGTTGCCGATTTATTGGCCTAATTAAACACCAACCAATTCCCATCGAGCGCACGCTA
TTCGCCAGTTCACTTGCCTTTTTTCACATCAAC--AAAAAAAAAGAGCTCCACGTCCATAAATAGGCGCACGTGATCGTC
CTTCTGCAGGTGTCCGGCGGCTCTGACATCTGAAGTCCGGCCAGGGGCCAGCAATGGGATGCTCCAGCTCGACGCTTGCG
CGCGGCGGCGTAGACATGTCGGCGCTGCCGGCGCCGGCGCGGCCAGAGAGGCGGCATAGCCTTCCTTCACGCGCCGCCTC
GGCGCTGGGCTCCCACGGCCTCTGCCGCGGCCGGCACGACGGCCTGCACCCCTACACGAGGTTGCCGCTCGAAGAGACGG
TAAAGGGCGAAGCCGAATACGGAGCACCGTCAGCGGAGGCGAAGGCCGCTTCCTTCAGTGGGGATGCGGCGGCGTGGCCT
GCGGAGGGCCGCGCGCCGGTCAAGCTATCGCCGGCCGGAATTCTTGAGGGCGCAGCATCGGCAACGTCGAGCACAGCGCA
TTGGACCGCATCAGCGACTTCGAGCACGCCGCAATTTTCAGCTTCGCCGAGTTGGTTCCGTGGAGAATCATCGTCGCCGC
---CACCGCCGGTGCAGTTTGTGGCGCCTGACTTTGACCCAGCGATCCTGTCCCTGTTCCGCGAGGCCTTGGTGGGACAG
TCACCGTCTCACCCGGCGGTTCTCTTCCCAGAGAATGAGGCCACGACCCTGCGGGAGACGGCCGCCTTGGACGAGGCGGT
GCCGCCGGCCGCCCGGGACATGCCGGAGGTGACCGGCTTGGTTCGCGCGCGTGTCGACGAGTTCCACAAGAAGCTGGAGG
AGATGAAGGAGATGAAGGAAGCTGAGGCCCAGAGCGCCACCCGCGACGCCACGGACGAGGTGGCGGCGCCTCCTCCGAGG
AAGGCGGTGGTAGTGTACTTCACCAGCATCCGCGGCGTGCGCAAGACGTTCGCGGACGGCGCGGCCGTGCGCGCCATCCT
GTTCTCCTACCGCGTGCGCGTGGACGAGCGCGACGTGTCCATGCACGCCGCCTTCAAGGACGAGCTCCGCAACCTCGTCA
GCCTCGCCGCGGGGGGCGGGCACGTGCTCCCCCGCGTTTTCGTCTTGGGCGATGGCGAGCAGCAGCAAGACCTTGGGGGC
GCCGACGAGGTGAGCGCGCTGCACGAGAGCGGCGAGCTCGCTCACGCGCTGGCCGGGTGCGAGACGGTGGCGGCGCTCCT
CCCCCCGTGCGTCGGGTGCGGTGACTTGCGGTTCCTGCCCTGCGACAGGTGCTTCGGCAGCTGCAAGCTCTTCGCCGGCG
ACGAGGGTGGGTGCGTGGGTGACATGTTCGAGGAGTGCACGCACTGCAACGAGAACGGGCTCATCAGGTGCCCGGTCTGC
TGCCTCTGACGGCCACAGCTAAGAGTTTCATGTGCCAGATTAGTGTCA---------------------GACTGAGAGAC
TCGCTACGTTCTCGTAGGCTACAATTAGCCTCACTTTACCGTGCTGCCAGAGAAGCTGCCTT-TTGGTTTTCTCCTGGTC
AGCAATATC-TTAGTTTGTTCGTGGATGGATGTGTTCTTGGAATCGCAGTTATCCCGGACCTTTCTATGCTCCAGGCGCC
CGG---TCCCGGAAGAGGGCTCTCGTGACTCCAAGTCATGGCCCATTGTTTCACTTGTTGTTTGCTTGGTGTAATCCGGG
CTGTGTTGTTGTAA-------TGCAACATCTTGTATCCTGCCTATTTTCTTTC-----------C---TTCTTTCCTTTC
GTGTGGTGTTGTATTTGTCTGCAAGGACGTCATTAATTTGACGCCAGGCCGCAGGCCTTCTTTCTAAAAAAGAAATTATC
CTGGATCTTAGAAGTCTAGGCATTTTTCTGTCTGTTTGATGTTTGCCAGCTTGGTGATTAGTTTGATTTGCTCCTATATT
TTGGGAAGCA-AAAATCATTTGGGAGATGG--------------------------------------------------
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----------------------------------------TTGTTTTCATACTAGTATCAAGTCATTTGTGAGTAAATAC
ATTTTAGTAGCTCAATTAAATGTTGACAGAGGACAAACCAGTTGGTACTACCCAGGAAAAG-AAGGGAAGCCCTGCTAGC
TTCTGCAG------------------------------------------------------------------------
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-----------------TAAAATCATCTCCTAAGACTATTTACCTGTTCATCTAGCATGATAAA-TAGATACAGTCAGCT
ACGTTAGCAGAACCAGAAATGAGGAGACATGAGTCTGTTATTGCTTGAGGTGTTAAAACATGTTTATAGCTTAACTTCTT
GCTTCTTTATCCTGATTCGTACTTTCCTTCCCGGTCT-AAAATGATTATTCTAAGTTGTTAGTTTATCTTCCTCTCTTAT
GAACAAAATGTTTTTTCACAACGGAAGTAATGGAATGCACAAATTACTGAAGCCGCGGAGATTCTTATAGTAGATACCAT
GGAGAAACCTTTAATCGCAATGGACTTTGTGAACAGCTT
>chr3D_22
---------------------AATGAACCACCCTCTTCACCTCATACACTAGTGAGTGGCCTTTGGTAGCACCCTGCAGC
CGACCAGGTAGCATCCATCAGTTGATCTTTGCAGCACCATCACGGTGAATCCTTGCAGCGACCTCTCTGTCAAACACTGC
AGCACCGGTGTCTGACATGCAGCGTGTGGGCGACTCTTGCGGCGACCGGCTAGCAGCATGGACGCCACGTATGCAGCACC
GGCGCCCCCGCTAGTGGTTGGCTTGCCCAGCCTGTCGGCGGCTTGCTACCGTGGGCGAAGCTTGCAACAGTAGGAGCGGC
GCGGAGCTGTCGTGCTTGTTGCAATGGGTCGTTGACTGCAGCAGCGGCGGTGTGGTGGGTGCTACATAGGTCCTTGGGTT
GGATGGCCGGCGGCGAGTTCGTATCATTGACAGGG-AGAACGAGAAGGATTGAGACAGAGAGAGGCAAGAGTAAA-----
-AGAAAAGGATGGTGAACTAGGGATGTTCTGTAATCGCTGACTCGGAGCCATGTGTAGGTGGAGATGGGAAGCGATGAAA
GAGAAGAATCAAGTGGCTCAAATCCATCCAAAAGGGCAAATCAGACGGCTGGCTAGA-----CGGTTGATCCTTGCCCAG
CCAACTAACGGCTAGCAGCCTTCCTTAAAAAATGATGATATTTTTGGCCTTGTCATATGGTTATCA-ATGGTCTTCTCCT
AAACACCATTTTCCCATGATAAAGAATTACCAAAATAACAATACTACATTTTATC---AAATAAATAAATAAATAATAAT
ACTACATTTATCCAAAAATAATAAGTTTCCGATTTATTGGCCTAATTAAACACCAACCAATTCCCATCGAGGGCACGCTA
TTCGCCAGTTCACTTGCCTTTTTTCACAACAACAAAAAAACAAAGAGTTCCACGTCCATAAATAGGCGCACGTGATCGTC
CTTCTGCACGTGTCCGGCGGCTCTGACATCTGAAGTCCGGCCAGGGGCCAGCAATGGGGTGCAACAGCTCGACGCTTGCG
CGCGGCGGCGTAGACATGTCGGCGCTGCCGGCGCCAGCGCGGCCAGAGAGGCGGCATAGCCTTCCTTCACGCGCCGCCTC
GGCGCTGGGCTCCCGCGGCCTCTGCCGCGGCCGGCACGACGGCCTGCACCCCTACACGACGTTGCCGCTCGAAGAGACGG
TAAGGGGCGAAGCCCAATATGGAGCACCGTCGGCGGAGGCGAAGGCCGCTTCCCTCAGTGGGGATGCGGCGACGTGGCCT
GCGGAGGGCCGCGCGCCGATGAAGCTATCGCCGGCCGGAATTCTTGAGGGCGCAGCATCGGCAACGTCGAGCACAGCGCA
TTGGACCGCATCAGCGACTTCGAGCACGCCGCAATTTTCAGCGTCGCCGAGTTGGTTCCGTGGAGAATCATCGTCGCCGC
---CGCCGCCGGTGCAGTTTGTGGCGCCTGACTTTGATCCGGCGATCCTGTCCCTGTTCCGCGAGGCCTTGGTGGGGCAG
TCACCGTCTCACCCGGCGGTTCTCTTCCCAGAGAATGAGGCCACGACCCAGCGGGAGACGACCGCCTTGGACGAGGTGGT
GCCGCCGGCCGCCCGGCACATGCCGGAGGTGACCGGCTTTGTTCGCGCGCGTGTCGACGAGTTCCACAAGAAGCTGGAGG
AGAAGAAGGAGATGAAGGAGGCGGAGGCCCAGAGCGCCACCCGCGACGCCATGGACGAGGTGGCGGCGCCTCCTCCGAGG
AAGGCGGTTGTAGTGTACTTCACCAGCATCCGCGGCGTGCGCAAGACGTTCTCGGACGGCGCGGCCGTGCGCGCCATCCT
GTTCTCCTACCGTGTGCGCGTGGACGAGCGCGACGTGTCCATGCACGCCGCCTTCAAGGACGAGCTCCGCAACCTCGTTG
GCCTCGCCGCGGGGGCCGGGCAGGTGCTCCCCCGCGTTTTCGTCTTGGGCGATGGCGAGCAGCATCTCGACCTTGGGGGC
GCCGACGAGGTGAGCGCGCTGCACGAGAGCGGCGAGCTCGCTCACGCGCTAGCCGGGTGCGAGACGGTGGCGGCGCACCT
CCCCCCGTGCGTCGGGTGCGGCGACTTGCGGTTCCTGCCCTGCGGCACGTGCTCCGGCAGCTGCAAGCTCTTCGCCGGCG
ACGAGGGTGGGTGCGTGGCTAACATGTTCGAGGAGTGCACGCACTGCAACGAGAACGGGCTCATCAGGTGCCCAGTCTGT
TGCCTCTGACGGCCACAGCTAAGAGTTTGATGTACCAGATTAATGTCAGACGAGGTCGTTAATTAGGCGGACTGAGAGAC
TCGCTTCGTTCCCGTAGGCTACAGTTAGCCTTACTTTACCGTGCTGCCAGAGAAGCTGCCTTCTAA-TTTTCTCCTGGTC
AGCAATATCGTTAGTTTGTTCGTGGATCGATGTGTTCTTGAAATCGCAGTTATCCTGGACCTTTCTATGCTCCAGGCCGC
GCCTGATCCCGGATGAGGGCTCTCATGACTCCAAGTCATGGCCCATTGTTTCACTTGTTGTTTGCTTGGTGTAATCCGGG
CTGTGTTGTTGTAA-------TGCAACATCTTGCATCCTGCCTATTTTCTTTTCATTTTCTTTTC---TTCTTTCCTTTC
GTGTGGTGTTGTATTTGTCTGCAAGGACGTCATTAATTTAACGCCAGGCTGCAGGCCTTCTTTCTAAAAAGGAAATTATC
CTGGATCTTCGAAGTCTAGGCATTTTTCTGTCTGTTTGATGTTTGCCTGCTTGGTGATTAGTTTGATTTGTTGCTATATT
TTGGGAAGCAGAAAATCATTTGGGAGAGCTTGGGTCGTGGCTCGGACTTCGGTAGTCGGATCTTCCCAGCGTGTCCGGGG
TGCTTCTCCGTGGGTTGCCTAGTTGCTTTGAAATCGGAGCTGCGGTGGAGCGAGTCCAGGTGGTGACGATGACATGCGCT
CGGTGGTCGGGAGGCACGGTCGGCGCAAGCATGCATATTTCCCGGGTGATGCCTGTCGTCAAAGTCGGAGATATCAGTTG
TTCATGCGTGTGGCCATCTGTTGGCACGTGCCGTCGTGGCTTATGTTCCATGTCGGTGGCCAGGTTGGCTGGTGGTGCCC
ATGTCTTTATGGCTTGGGTTGTGTCGGTTTTAGCCCGATTTTCCGTCAATTAACCAGGCAATTCCAAATTCTTCTTAATC
AATGAAAATGGCAGGTCTTTTGCTTTGTTTAAAAAAAAGATTGTTTTCATACTAGTATC-AGTCATTTGTGAGTAAATAC
ATTTTAGTAACTCAATTAAATGTTGACAGAGGACAAACCAGTTGATACTACCCAGGACAAGAAAGGGAAGCCCTGCTAGC
TGCTGCATTAAAATAAGAGTCAATTATATCGGTGGTGCTAGAACTTGGCGTAAGCGGTCACTTTAGTGCTAGAACTTGCG
GTATACATTAAAGTGGTGCAAAAACTTGGCTTGAACGTGCAAATACGGTGCAAATCTCGTTTGTATACGCCGACGAAGCT
GACGAGGCATGATAGCATGGCGCAGGGCCCGCTGTCAGTGACCATATGGTGCAGATTGGGCGTGTGTTTTCTTTTTGCAA
AAAAACCTTAATTTTTTTATTTTTCGTTTTTTTCTCAGGTAAAGGCCCCTGTCAAGTGTACCTAGAAATTATATGTGTGG
CATCAGGTGGTCCCACCTGTCAGCCAAACATCACAAATTTTATTAGTATTAGAAAGAAAAATAAAAGCCAGGCAAGGATT
CGAACCGGTGACCTATTGTCAACCGAGAGCGTGGCTAGGAAACACACCAGTTAACAACTGACGTTCTATAAGTATACTCA
GTCTTTGTATCTTGGCCAAATAACGTAAAATAAGAATTTTCATTCAGATAAAAAAGATACCGCCATGGGATTTCGTACCA
GCGACCTGACAATTACCACGAGGAGGACCTAGCAAATATACAACAAATGCCATTTTATGCCTTAATATAGGATTGTTAAC
CTTTATGTCTACAACAGTACCCCTGCTCACCCGCAAAAAATAGACAATACGTCCGCTGGCCTAAACAGACTGCAGTTAGT
GCGGTTCATTTTAAATATGTTAGTTTTTTTTCTTTTCTTATTTTTAGCCCGAAAAACTGTAAACTGTAATTGTACATATA
ATTGTCAATACGTATTCATATGAGAACCTGCAGTCTGAGGCATACTAGGCTAATTTTTTACGCACATATTTATATTGATT
TAAAAATACATAACCTGTTTTTAGAAGACACACAAAGTTTATTAAAATGCATGAACACTTTTAAAAAACATAAAATCATT
AAAGCTTGCACAATTTTATATACAACATGAATATTTTGTTAAAAAATTGTAAATTTTTTAACTGATATAATAATTTTTTA
GGTTCACATATTTTGTAAAATTACTTTGATATTTTATTTAATATGCAAAAAAGTAATTATACAATTAATTCATAATTCAA
TTTGATGGATTTTTAAAAATTAATAGATGAGCATTGTTTTAGTCTAATATATTTTATTTATATGTATATTATTTACAATT
ACAATTTACATTTCTTTACAACTTTTGAAAAGTGAAAAAATAACATAAATTGTAGCCCAGGAGCAGGTACTGTTATAGAC
ATAAACTGTAACAATTATATTTACACATGAGAGTACATTGTTGCAGTGGCACGCCCTCCTAATTGTTTTACTTTGATAGC
TGGCTCGAAACCCTATGGGCGTAACCCTTTTTAGGATTAAAAATTCTTGAGTTATGTTACTTAATTCCAAGATATAAAAT
GTGTGTATGCTTCTATGTCATGTTGTGAGCTATGGGCTACGCACCCAGTTTAGACCGAGTTCGCCGATACGAATCCATTG
GCGGCATATTTTTCATTCGAATAAATTTGTGATGTTTCACTAACAAGTGGGACCGACTGGATGCCACGCACCTGACAGGG
CCTTTTCGTGAGAAAAAAACCCAGGTATTTTGCAAAAATAGCACGCCACACTTCCAGTTTTCACCATGCAGTCACTTACG
GTGGGCCCTATGCCATGCTGTCATGCCTCATCAGCGTCACAGCCGTATACAAACAAGAGTTGCACCGTATTTGCAAGTTG
AAGCCAAGTTTTTGCACCACTTTAATATATGCCGCAAGTTCTAGCACCAAAGTGGCCGTTTGCACCAAGTTCTGGCACCA
CCGGTGTAATTGACTCTTAAAATAATCTCCTAAGACTATTTACCTGTTTATCTAGCATTATAAAATAGATACAGTCAACT
ACGTTAGCAGAACCAGAAAAGAGGAGACATAAGTCTGTTATTCCTTGAGGTGTTAAAACATGTTTTTAGCTTAACTTATT
GCTTCTCTATCGTGATTCTTATTTTCCTTCCAGGTCT-AAAATGATTATTCTAATTTGTTAGTTTATCTTCCTCTCTTAT
GAACAAAATGTTTTTTCGCAACAGAAGTAATGGAATGCACAAATTACTGAAGCCGCGGAGATTCTTATAGTAGATACAAC
AGAGAAACCTTTAATCGCAATGGACTTTGTGAACAGC--
>chr3B_22
---------------------AATGAACCGCCCTCTTCACCTCATACGCCAGTGAGCGGCCTTTGGTAGCACCCTGCAGC
CGGCCAGGCAGCATCCATCAGTTGATTTTTGCAGCACCGTCACGGTGAATCCTTGCAGCGACCTCTCTGTCAAATATTGC
AGCACCGGTGTCTGACATGCAGCGTGTGGGCGACTCTTGCGGCAACCGGCTAGCA-----GACGCCACGTATGCAGCACC
AGCGCCCCCGCTAGTGGTTGGCTTGCCCAGCCTGTCGGCGGCTTGCTACCGTGGGCGGAGTTTGCAGCAGTAGGAGCGGC
GCGGAGCTGTCGTGCTTGTTGCAATGGGTCGTTGACTGCAGCAGCGGCGGTGTGGTGGGTGCTACATAGGTCCTCGGGTT
TGGTGGCCGGCGGCGAGTTCGTAGCATCGACCGTTTAGAACGAGAAGGATTGAGAGAGAGGGG-----------------
-------GGATGACGAACTAGGGATGTTCTGTAATCACTGACTGGGAGCCATGTGTAGGTGAAGATGGGAAGCGATGAAA
GAGAAGAATCAAGTGGCTCAAATCCATCCAAAAGGGCAAATGAGACGGCTGTCGTCCCTAAGCGGTTGATCCTTGCACAG
CCAGCTAACGCCTAGCAGCCTTCCTTAAAAAATGATGATATTTTTGGTCTTGTCATATGGTTATCATATGGTCTTCTCCT
AAACACCATTTTTCCATGATAAAGAATTACCAAAATAACAATACTACATTTATCAAATAAATAAATAAATA---AATAAT
ACTACATTTATCCAAAAATAATAAGTTGCCGATTTATTGGCCTAATTAAACACCAACCAATTCCCATCGAGCGCGTGCTA
TTCGCCAGTTCACTTGCCTTTTCACCAT--AAC--AAAATCAAAGAGTTCCACGTCCATAAATAGT--CACGTGATCGTC
CCACTGCACGCGTGCGGCGGCTCTGACATCTGAAGTCCGGCCA-------GCAATGGGGTGCTCCAGCTCGACGGTTGCG
CGCGGCGGCGTAGACATGTCGGCGCTGCCGGCGCCGGCGCGGCCAGAGAGGCGGCATAGCCTTCCTTCACGCGCCGCCTC
GGCGATGGGCTCCCTCGGCCTCTGCCGCGGCCGGCACGACGGCCTACACCCCTACACGACGTTGCCGCTCGAAGAGACGG
TAAGGGGCGAAGCCCAATATGGAGCACCGTCGGCGGAGGCGAAGGCCGCTTCCTTTAGTGGGGATGCGGCGGCGTGGCCT
GCGGAGGGCCGCGCGCCGATGAAGCTATCGCCGGCCGGAATTCTTGAGGGCGCTGCGTCGTCAACGTCGAGCACAGCGCA
TTGGACCGCATCAGCGACTTCGAGCACGCCGCAATTTTCAGCGTCGCCGAGTTGGTTCCGTGGAGAATCATCGTCGTCGC
TGCCGCCGCCGGTGCAGTTTGTGGCGCCTGACTTTGATCCGGCGATACTGTCCCTGTTCCGCGAGGCCTTGGTGGGACAG
TCACCGTCTCACCCGGCGGTTCTCTTCCCAGAGAATGAGGCCACGACCCCGCGGGAGACGGCCGCCTTGGACGAGGTGGT
GCCGCCGGCCACCCGGGACATGCCGGAGGTGACCGGCTTGGTTCGTGCGCGTGTCGACGAGTTCCACAGGAAGCTGGAGG
AGAAGAAGGAGATGAAGGAGGCGGAGGCCCAGAGCGCCACCCACGACGCCGCGGACGAGGTGGCGGTGCCTCCTCCGAGG
AAGGCGGCGGTAGTGTACTTCACCAGCATCCGCGGCGTGCGCAAGACGTTCGCGGACGGCGCGGCCGTGCGCGCCATCCT
GTTCTCCTACCGCGTGCGCGTGGACGAGCGGGACGTGTCCATGCACGCCGCCTTCAAGGACGAGCTCCGCAACCTCGTCG
GCCTCGCCGCGGGGGCCGGGCACGTGCTCCCCCGCGTTTTCGTCTTGGGCGATGGCGAGCAGCAGCTCGACCTTGGAGGC
GCCGACGAGGTGAGCGAGCTGCACGAGAGCGGCGAGCTCGCTCACGCGCTAGCCGGGTGCGAGACAGTGGCGGCGCACCT
CCCCCCATGCGTCGGGTGCGGTGACTTGCGCTTCCTGCCCTGCGGCACGTGCTCCGGCAGCTGCAAGCTCTTCGCCGGCG
ACGAGGGTGGGTGCGTGGCTGACATGTTCGAGGAGTGCACGGAGTGCAACGAGAACGGGCTCATCAGGTGCCCGGTCTGT
TGCCTCTGACGACCACAGCTAAGAGTTTCATGAGCCAGATTAGTGCCAAACGAGGTCGTTAATTAGGCGGACTGAGAGAC
TCCCTTCGTTCTCGTAGGCTACAATTAGCCTTACTTTACCGTGCTGCCCGAGAAGCTGCCTT-TAA-TTTTCTCCTGGTG
AGCAGTATC-TTAGT-----------------------------------------------------------------
------------------------------------------------------TTGTTGTTTGCTTGGTGTAATCCGGG
TTGTGTTGTTGTAAATTGTAATGCAACATCTTATATCCTGCCTATTTTCCTTTCATTTCCTTTTCCTTTTATTTTCTTTT
GTGTGGCGTTGTATTTGTCTGCAATGACGTCATTAATTTAATGCCAGGCCGCAGGCCTTCTTTCTAAAGAAGAAATTATC
CTGGATCTTTGAAATCTAGGTATTTTTCTGTCTGTTTGATGTTTGCCTGCTTGGTGATTAGTTTGATTTGCTGCTATATT
TTGGGAAGCA-AAAATCATTTGGGAGATGG--------------------------------------------------
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----------------------------------------TTGTTTTCATACTAATATC-AGTCGTTTGTGAGTAAATAC
ATTTTAGTAACTCAGTTAAATGTTGACAGAGGACAAATCAGTTGATACTACCCAGGAAAAGAAAGGGAATCCCTGCTAGC
TTCTGCAG------------------------------------------------------------------------
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-----------------TAAAATCATCTCCTGACGCTATTTACCTGTTCATCTAGCATGAT-AAATAGATACAGTCAGCT
ACGTTAGCAGAACCAGAAATGAGGAGACATAAGTCTGATATTGCTTGAGGTGTTAAAACATGTTCATAGCTTAAATTCTT
GCTTCTTTATCCTGATTCGTATTTTCCTTCCCGGTCTAAAAATGATTATTATAATTTGTTAGTTTATCTTCCTCTCACAT
GAACAAAATGTTTTCTCACAACAAAAGTAATGGAATGCACAAATTATTGTGCAAAGATTCTTACTGTG----GATACCAC
GGAGAAACCTTTAATCACAATAGACTTTGTGAAC-----
>SNPs
SSSSSSSSSSSSSSSSSSSSS-------S--------S-------------SS---------------------------
-----------S--------------------------S----------------S--S------------S--------
-S----S---------S-------------------S-S--------SS-S--S-----S------S-------------
--------S-----------------------S----------------------------------S--S------S--
-S--S-S-----------------------------S---S--SS--SS---S--------S-S-SS----------S--
-------------------S--------------------------------------------SS-SSSSSS-SSSSSS
S---------------------------S------------S--------------------------S-----------
--------------------------------------------------S----------------------------S
------------------S-------------------------------------------------------------
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----------------------------S-----------S------S--------------------------------
--------S-------------------------------------------------S---------------------
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--------------S--------------------------------------------S--------------------
---S----------S----S-----------S------------------------------------------------
------------------S-S-----------------------------------------------------------
------------------------------------------S-------------------------------------
----S--------------------------------S--S---------------------------------------
-------------------------------------------------S--------------------------S---
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---S---------------S--S---------------------------------------------------------
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-------------------------------------------------------------------------------S
---------------S--------------------------------------------------SS------------
--------------------------------------------------S-------------------------S---
--------------------------------------------S--S-----S--------------------------
------------------S------------------------------------------------------------S
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-----S-------------------------S--------------------------------SSS-------------
---------------------------S------------S--------------S---------------------SS-
SSS----------S----------S-------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------------S----------------------------------------
---------S-------------------------------------S------------------------S-------
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-----------------------------------------------------------S--------------------
---------S----------------------------------S-----------------------------------
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------------------------------S-------------------------------------------------
---------------------S--------------------------------S-------------------------
----------------------S--------------------------------------------------------S
-------------------------------------SS
>forward_136
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------------------------------------CCCTCACGGTGAATCCTTGT------------------------
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>reverse_1180
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-----------------------------------------------------------GGTTGCCGCTCGAAGAGAC--
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>forward_640
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------------------------------------------------------------AGCGGTTGATCCTTGCACAA
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>reverse_2352
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-------------------------------CACTTTACCGTGCTGCCAGA-----------------------------
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