>input_sequence_56826
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-------ATGGCGCAGCTGCCGCCCAAGGTCCCCGCCATGGCGCCGGCCTGGCCGGAGTTCGGGGACGGGCACCACCACA
GCGCCCACGCCCACGCCCGCCACCACCATCACCAGCGCAGCCCCTCCATGGGCGCCTTCCTCGCCGCGCCAATGCCGCCG
CTCCCGCCCGCCAACGG------------CGGGGTGCAGCAGCAGCCGTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGCGGCGCGCACCGCCGCACGGTCAGCGACTCCGTCGCCTTCCTCGACGACGGCAATGCCGGCGGCGTCGGGG
CGCACGAGTTCGACCGCCTCGACGACGACCAGCTCATGTGCATGTTCTCCGACGAGCTGGCCCCGCAGCGCCAGGCCGCC
---------AGCGCGTCCTCGCCGTCCGATCACAACAGCGTCAACGACGAGAAGCAGGACAGGGGCGACGCCGAGGAGGC
GCAGAGCGACTGCAATGGCGACGACGGCGCGGCGCCCGGGCAGCCGTCCTCGCCCGCCACAGCCGATCCCAAGCGGGTCA
AGAGGTGATCTTTTGT-C-CTTACACTCCTCCCAGAATCACGGCAATGCACAGCTCCGAGAGGCAGAATTCTCCAATTTC
TCT--------------ACACTCGCAGGATCCTTGCAAACCGGCAGTCGGCGCAGCGGTCGCGCGTGCGCAAGCTGCACT
ACATCTCGGAGCTCGAGCGCAGCGTCACGTCGCTCCAGGTCCGTCGAACTGTTCACATTTCGAGCTTGGTTTCCTCGCCT
CCAAAGAAAAACG--CCATGA--ATTTGACCTCGAACCCGTATGTGCTCCCTGTTGAGCAGACGGAGGTGTCGGCATTGT
CCCCGCGCGTGGCATTCCTGGACCACCAACGCTCGCTGCTGACGCTGGGGAACAGCCACCTCAAGCAGCGCATCGCGGCG
CTCGCGCAGGACAAGATCTTCAAAGACGGTGACCGCCATTGCCACCCCTCGCAATTACTACTATTTCGAAATTTCTCACC
GGCCACCTTCCGAATTCAATTCG-----AAACA-ATCTACAACCGC----TTTGCTGACTAACT----CTCTGCGCGC--
-------------GCGTGCTCAGCTCATCAGGAGGCACTGAAGAAGGAGATAGAGAGGCTGAGCCAAATCTACCAGCAGC
AGCAGAGCCTCAGGGACGCGCAACCCCCAGCGGACGGCGACGGC---CCCCCGGTCCGCGGCGACGACAACGACGGTCTG
ATCGCCGGCGAGGGGACCGCCGCGGCCTCGTGA-----------------------------------------------
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>chr3A_1_TraesCS3A01G131900
CTTACACGCCAGTTGTAGCTTCCGTCCTTTCAGTAGCAACACAAAAATTGCTAAAGCTTCAGAATCATCATGTGACTCTG
AGTAAACATTGCACTGTTACGGTGCTATTCCCTGTCAGTGGTTGGAAATGGAACGAAAAGAAAACGACACCTTTGTCATG
TAAGGTGATATAATCTGAGTAAATGCAAGTTTATGGTTTGCTGGCGTTATGCTCTCGTAAGAGCAGAAAGACATTCTAGA
TCTTTGGTATGTAAGTTGATACTCCTTCTTGTCTTTTTTACTCTGCGTATTAGATTTGTATCAAGTCAAACTTTGCAAAT
TTTGACCAAATTTATTGTAAAAAATGTCAACATCTACACTATTAAATATATATAATATGAAACTACATTTCATAATGAAT
CTAACAACGTTGATTTGTCATTGTGAATATTGATATTTTTTCCTATAAGTATGGTCAAAGTATAGATAATTTGACTCCGA
AGAAAACTAATATGCAGACTAAAAGGACCGGAGGGAGTAATAGTCTGAACTTTTATAGGGAAGGAGGGAGTATATGCTTG
ACCTCTTTTGTACTAAGCCCAGCTTCGCTCCCGCCACTTCACCTTGTAAACACCAGCTGGTGCTAGCTGTCCTTCTGGAC
TCCC-------TCCCCTCGTCATGTGACCTCCCTCCCCACCTCGCGCTCTCTCTCTCTC-TCTCTCTCTCTTGCTATTTC
TCTCTCTGCGCGCAGGCATACCACATTCCAAGTCGCTCCTCTCTCCTCTGT-----------------CCCGATTTAGCT
CAGCGCCGAGCTGAGCCCCCACGCCGTCC--------ATTCGCCCA-TTGTTTCCGCGGCGGCGGC---G----GCAGCA
ACGTGAGCCAAAGCGAGGGCCGTCCAATTTCCGGCACGGCACGGCCCGAGCCTACATTACCGCTCCAGCCCCCGGCGCTG
CAAAGGTTTGGGCGCTGCGCCATCCATCGCGCCCGCTG------CCCGCGCCGGTTGGTTGATTCGGGGGCGCGGTCCCT
CCCGGCCATGGCGCAGCTGCCGCCCAAGGTCCCCGCCATGGCGCCGGCCTGGCCGGAGTTCGGGGACGGGCACCACCACA
GCGCCCACGCCCACGCCCGCCACCACCATCACCAGCGCAGCCCCTCCATGGGCGCCTTCCTCGCCGCGCCAATGCCGCCG
CTCCCGCCCGCCAACGG------------CGGGGTGCAGCAGCAGCCGTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGCGGCGCGCACCGCCGCACGGTCAGCGACTCCGTCGCCTTCCTCGACGACGGCAATGCCGGCGGCGTCGGGG
CGCACGAGTTCGACCGCCTCGACGACGACCAGCTCATGTGCATGTTCTCCGACGAGCTGGCCCCGCAGCGCCAGGCCGCC
---------AGCGCGTCCTCGCCGTCCGATCACAACAGCGTCAACGACGAGAAGCAGGACAGGGGCGACGCCGAGGAGGC
GCAGAGCGACTGCAATGGCGACGACGGCGCGGCGCCCGGGCAGCCGTCCTCGCCCGCCACAGCCGATCCCAAGCGGGTCA
AGAGGTGATCTTTTGT-C-CTTACACTCCTCCCAGAATCACGGCAATGCACAGCTCCGAGAGGCAGAATTCTCCAATTTC
TCT--------------ACACTCGCAGGATCCTTGCAAACCGGCAGTCGGCGCAGCGGTCGCGCGTGCGCAAGCTGCACT
ACATCTCGGAGCTCGAGCGCAGCGTCACGTCGCTCCAGGTCCGTCGAACTGTTCACATTTCGAGCTTGGTTTCCTCGCCT
CCAAAGAAAAACG--CCATGA--ATTTGACCTCGAACCCGTATGTGCTCCCTGTTGAGCAGACGGAGGTGTCGGCATTGT
CCCCGCGCGTGGCATTCCTGGACCACCAACGCTCGCTGCTGACGCTGGGGAACAGCCACCTCAAGCAGCGCATCGCGGCG
CTCGCGCAGGACAAGATCTTCAAAGACGGTGACCGCCATTGCCACCCCTCGCAATTACTACTATTTCGAAATTTCTCACC
GGCCACCTTCCGAATTCAATTCG-----AAACA-ATCTACAACCGC----TTTGCTGACTAACT----CTCTGCGCGC--
-------------GCGTGCTCAGCTCATCAGGAGGCACTGAAGAAGGAGATAGAGAGGCTGAGCCAAATCTACCAGCAGC
AGCAGAGCCTCAGGGACGCGCAACCCCCAGCGGACGGCGACGGC---CCCCCGGTCCGCGGCGACGACAACGACGGTCTG
ATCGCCGGCGAGGGGACCGCCGCGGCCTCGTGAC--------CGAGATCCGGCCCGT----CGGCCTCAGGACAACCGAG
TGTTGTCGCT------------------GT------TGTTAGGATTTGGTGCACTGCATTCATTGGCTTGGGTTGGGCTT
GCATT----TCCTCGGGGTGTGGTGTGATTGATG-----TGTATGTAACTCAGCCTGTTCATGC-----------TGCTT
ATTTGTTCATTCTTGCGTCCTCCGTCTG----CTCCTGATCGCTCTTCTCCACTTCCCCTGATCTGTAATTTTTT-CTCC
GGCATTTTGGGCGAAGGTCGTAGCTAAGGATTTGTAAAAACTCGGATTGGTTGAGGTCGAGTGGTTCCATTGCTTGGCTG
GTTTCCTTGT-ATCTTCTGGTCAGTCAATCAAATGCAATGTTTTCTCTCATATGCAACCGTGGCCAAACTTGTACTCTCT
CCGTTCGGAATTACTTGTCGCAGAAATAGATGTACATCCATTTTCGCGACAAGTAATTCCGAAAGGAAGAAGTAGTACAA
TTATGGAGTAAGGTTCATGTGTAGGTGCCTGG------CTGCTTTACATTGATAAGCGGATTTATTACGGTGTCACATGC
GGGCAGGGCAGGTGAAGCTGGGGTGTGAAGCGCGAACATGCGAGGGGGGGGGGGGCATCTCATTCCTTGCTGTTCCATAA
CAGGGATATTAAGAGGGTGCTTGGATATAAGGGACTATTTTTAGTCTGACTAAAAATAGTTTCTTTTAGAGGCTAAAGTT
CCAAGCACCCCTGACTAAAGAGAGGCTAGGACTAGTCTTGAGGCTAAAATCTTTTAGTCATGGGAAACCTACTAAAATAT
GTATTAGCTCTCTCTCTCCTCATTTAATTCCTCTCCTTAGTTCTGGATTGGAGGGTTTGGAGGATAATAAATGCTCAATA
ACTAGATTTTAGTCTCTTTAGTATTTGGATCCAAGCATGGGTGAGACTAGCAAATTTTAGTCCCACTACTTTTAGTCATG
GGACTAAAATGTATCCAAGCATGCTCTAAAACGCAGTGACAGCGAGGGAGTTGCCTTCCTT
>chr3D_578
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-----------------CCCAGCTTCGCTCCCGCCACTTCAGCTTCTAAACACCAGCTGGTGCTAGCTGTCTCTCTCTCT
CT--------ATCCCCTCGTCATGTGACCTCCCC------------------------C-TCTCTCTGCCTTCCTATTTC
TCTCACTGCGCATAGGCATAGCACGTTTCGAGTCGTCCCTCTCTCCTCTGTCCCTCCCACGCCCGTTGCCCGATTTAGCT
CAGCTTCCAGCTGACCCCCCACGCCATCC--------ATTCGCCCA-TTGTTTGCGCGGCGGCGGCAGGGA----CGGGA
ACGTGAGCTAAAACGAGGACCGTACAATTTCCGTCACGGCACGGCCCGGACCTACATTAGCGCTCGAGCCCCCGGCGCTG
CAAAGGTTTGGGCGTTGCGCCATCGATCGCGCCC-----------------CGGTTGGTTGATTCGGGCGCGCGGC----
CCCGGCCATGGCGCAGCTGCCGCCCAAGATCCCCGCCATGGCGCCGGCCTGGCCGGAGTTCGGGGGCGGGCACCACCACG
G------CGCCCACGCCCGCCACCACCATCACCAGCGCAGCCCCTCCATGGGCGCCTTCCTCGCCGCGCCAATGCCGCCG
CTCCCGCCCCCGGCGCCCGCCGGCGGGGGCGCGGCGCAGCAGCAGCCGTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGCGGCGCGCACCGCCGCACGGTCAGCGATTCCGTCGCCTTCCTCGACGACAGCAATGCCGGCGTCG---GCG
CGCACGAGTTCGACCGCCTCGACGACGACCAGCTCATGTCCATGTTCTCCGACGAGCTGGCCCCGCAGCGGCAGGC----
-----CGCGAGCGCGTCGTCGCCGTCCGACCACAACAGCGTCAACGACGAGAAGCAGGACAAGGGCGACGCCGAGGAGGC
GCAGAGCGACTGCAATGGCGAC---GGCGCGGCGCCCGGGCAGCCGTCCTCGCCCGCCACGGTCGATCCCAAGCGGGTCA
AGAGGTGATTTTTTCTT--TTTTTA---CTCGCAGAATTACGACAATGCGCAGA--------GCAGAATTCTCCAATTTC
TCAGCGTCCTCGTCGCGAAAATCGCAGGATCATTGCAAACCGGCAGTCGGCGCAGCGGTCGCGCGTGCGCAAGCTGCACT
ACATCTCGGAGCTCGAGCGCAGCGTCACGTCGCTCCAGGTCCGTCGAACTGTTCACATTTCGAGCTTGATTTCCTCGCCT
CCAAAGTAAACAGCGTGA--T--TTTTGACATGGAATCCGTGCTCCC--------GAGCAGACGGAGGTGTCGGCATTGT
CCCCGCGCGTGGCATTCCTCGACCACCAACGCTCGCTGCTGACGCTGGGGAACAGCCACCTCAAGCAGCGCATCGCGGCG
CTCGCGCAGGACAAGATCTTCAAAGATGGTGACCGCCATTGCCACCCCTCGCAGTTACTACTATTTCGAAATTCCTCACC
GACCACCTTCCGAATTCAATTCA-----AAACAAATCTACAACCGC----TTTGCTGACTAACT----CTCTGCGCGTGA
ACGAA-----------TGCTCAGCTCATCAGGATGCACTGAAGAAGGAGATAGAGAGGCTGAGGCAAGTCTACCAGCAGC
AG---AGCCTCAGGAACGCGGAACCCCCGGCACACGACGACGGC---CCCCTGGTCCGCGGCGACAACAGCAACGGCTTG
ATCGCCAGCGAGGGGACCGCCGCGCCCTCGTGAT--------CGAGATCCGGCACAT----CGGCCTCAGGACAACCAAG
TGTTGTCGCTGTTCTTCTTGCTGCTGCTACTGCTGCTGTTAAGATTTGGTGCACTGCATTGGCTTGGTTTGCA-------
----TATATTCTTCGGGGTGTGAT--------GG-----TGTCTGTAACTCAGTTTGTTCATTCCGGTGGGTGGTTGCTT
ATTTGTTCATTCTTGCGTCCTCTGTCTGTCTGCTCCTGATCACTCTTCTCCACTTCCCCTGATCTGTAATTTTTC-CCCC
GGCATTTAGGGCGAAGGTTGTAGCTAAGGATTTGTAA---CTCGGATTGGTTGAGGTCGAGTGGTTCCATTGCTTGGCTG
GCTTTGTTCT-ATCTTCTG----GTCAATCAAATGCAATGTTTTCTCCGTCCACTGTTCGTGCATTGCCAGATTTTTTTT
TCTTGCAGCCGTAACAT---------------------------------------------------------------
-------GTAAGGTTCATGTGTAGGAGTAGGTGCCTGCCTGCTTTACATTGATAAGCAGATTTATTACGGTGTCACAT--
--GCAGGTCAGCTGCAGCTGGAGTGTGAAGCGAACATGCA--------GGGAGGGCATCTCATTCCTTGCTGTTCCATAA
CAGGATATTAA---------------------------------------------------------------------
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>chr3B_578
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-----------------CCCAACTTCGCTCCCGCCACTTCACCTTCTAAACACCAGCTGGTGCTAGCTGTCTCTCTCTCT
CTCTCTCTCTATCCCCTCGTCATGTGACCTCCCC------------------------CCTCTTTCTTCCTTCCTATTTC
TCTCTCTGCGCATAGGCATAGTACGTTTCAAGTCGTTCCTCTCTCCTCTGTCCCTCTCACGCCCATTGCCCGATTTAGCT
CAGCGTCCAGCTGACCCCCCACGCCATCC--------GTTCGCCCA-TTGTTTGCGCGGCGGCGGC---GA----CGGGA
ACGTGAGCCAAAACGAGGGCCGTACAATTTCCG-----GCACGGCCCGAGCCTACATTACCGCTCGAGCCCCCGGCGCTG
CAAAGGTTTGGGCGTTGT------------GCCCGCTGCCTGCGCCTGCACCGGTTGATTGATTCGGGCGCGCGGT----
CCCGGCCATGGCGCAGCTGCCGCCCAAGATCCCCGTCATGGCGCCGACCTGGCCGGAGTTCGGGGGCGGGCACCACCACA
G------CGCCCACGCCCGCCACCACCATCACCAGCGCAGCCCCTCCATGGGCGCTTTCCTCGCCGCGCCAATGCCGCCG
CTCCCATCCCTGGCGCCCGTCAGCGGGG-CGGGGCACAGCAGCAGCCGTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGCGGCGCGCACCGCCGCACGGTCAGCGACTCCGTCGCCTTCCTCGACGACAGCAATGCCGGCGTCG---GTG
CGCACCAGTTTGACCGCCTCGACGACGACCAGCTCATGTCCATGTTCTCCGACGAGCTGGCCCCGCAGCGGCAGGCCGCG
CCAGCCGCGAGCGCGTCGTCGCCGTCCGACCACAACAGCGTCAACAAAGAGAAGCAAGACAAGGGCGACGCCGAGGAGGC
GCAGAGCGACTGCAATGGCGAC---GGCGCGGCGCCTGGGCAGCCGTCCTCGCCCGCCACAATCGATCCCAAGCGGGTCA
AGAGGTGATTTTTCCTT--TTTT-A---GTCACAGAATTACGACAATGCACAGA--------GCAGAATTCTCCAATTTC
TCAGCGTCCTCGTCGCAAAAATCGCAGGATCATTGCAAACCGGCAGTCGGCGCAGCGGTCGCGCGTGCGCAAGCTGCAGT
ACATCTCGGAGCTCGAGCGCAGCGTCACGTCACTCCAGGTCCATCGAATTGTTCACATTTCGAGCTTGATTTCCTCGCCT
CCAAAGAAAATAGCGTGA--A--TTTTGACATGGAATCTGTGCTCCC--------GAGCAGACGAAGGTGTTAGCATTGT
CCCCGCGCGTGGCATTCCTCGACCACCAACGCTCGCTGCTGACGCTGGGGAATAGCCACCTCAAGCAGCGCATCGCGGCG
CTCGCGCAGGACAAGATCTTCAAAGATGGTGACCGCCATTGCCACCCCTCGCAATTACTATC---TCCAAATTTCTCACC
GACCACCTTCCGAATTCAATTCA-----AAACA-ATCC---ACCGCTTTTTTTGCTGACTAACT----CTCCGTGCGTGG
ATGAATCTG---TGCGTGCTCAGCTCATCAGGAGGCACTAAAGAAGGAGATAGAGTGGCTGAGGCAAGTCTACCAGCAGC
AG---AGCCTCAGGACCATGGAACCCCCGACAGACGACGGCGGC---CCCCTGGTCCGCGGCG---ACAGCAACGGGTTG
ATCGCCAGCGAGGGGACCGCCGCGCCCTCGTGATTGAGAATTCGAGATCCGGCCCGT----AGGCCTTAGGACAACCAAG
TGTTGTCGTTGTTCTTCTTGCTGCTGCTGT------TGTTAGGATTTGGTGCATTGCATTGGCTTGGTTTGCA-------
----T----TCTTCGGGGTGTGAT--------TA-----TGTATGTAACTCGGTTTGTTCATTCCGGTGGGTGGTTGCTT
ATTTGTCCATTCTTGCATCCTCTGTCTGTCTGCTCCTGATCACTCTTCTCTACTTCCCCTGATTTGTAATTTTTTTCCCC
GACATTTTGGGCGAAGGTTGTAGATAAGGATTTGTAA---CTCAGATTGGTTGAGGTCGAGTGGTTCCATTGCTTGGCTG
GTTTTCTTGTAAT-TTCTG----GTCAATCAAATGCAATGTTTTCTC---------------------------------
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>chr2B_764
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--------------------------------------------------------------------CCCGATTTAGCT
CAGTGTCGACCTGAA-CCCCACGCCATCCATTCGCGGATTCGCCCAATTGTTTCCGCGGCGGCGGCCAGCGGCAACGACA
ACGTGAGCGAAAACGAGGGCCGTACAATTTCTG-----GCATGGCCCGGGCCTACATTATTGCTCGAGCCCCCGGCAATG
CAAAGGTTTGGGCGTTGCGCCATCGATCGCGCCCGCTGCCTGCGCCTGCGCCGGTTGATTGATTCGGGCGCGCGGT----
CCCGGCCATGGCGCAACTGCCGCCCAAGATCCCCACCATGGCGCCGGCCTGGCCGGAGTTCGGGGGCGGGCACCACCACA
G------CGCCCACGCCCGCCACCACCATCACCAGCGCAGCCCCTCCATGGGGGCCTTCCTCGCCGCGCCAATGCCGCCG
CTCCCGCCCCCAGCGCCCGCCAGCGGGGACGCGGCGCAGCCGCAGCCTTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGCGGCGCGCACCGCCGCACGGTCAGCGACTCCACCGGCTTCCTCGACGACAGCAATGCCGCCGTCG---GCG
CGAACGAGTTCGACCGCCTCGACGACAGCCAGCTCATGTCCATTTTTTCCGACGAGTTGGCCCCACAGCGGCAGGCGCAG
GCG---GCGAGCGCGTCGTCGCTGTCTAATCACAACAGCATCAACGACGAGAAGCAGGACAAGGGCGACGCCGAGGAGGC
GCAGAGCGAATGCAACGGCGAC---GGCGCGGCGCCTGGGCAGCCGTCCTCGGCCGCCACAGTCGATCCCAAGCGGGTCA
AGAGGTGATTTTTTTTTCCTGTT-A---CTCTTAGAATTACGGCAATGCACAGCTCCGAAAGGCCGAATTCCCAGATTTC
TCAGCGTCCTCGTCGCCACAATCGCAGGATCCTGGCAAACCGGCAGTCGGCGCAGCGGTCACGCGTGCGCAAGCTGCAGT
ACATCTCGGAGCTCGAGCGCAGCATCACGTCGCTCCAGGTCCATCGAATC---------TCGAGCTTGATTTCCCTGCCT
CCAAAGAAAAACA--CCGTGA--ATTTGACCTGGAAACCGTGCTCCC--------GAGCAGAAGGAGGTGTCGGCATTGT
CCCCGCGCGTGGCATTCCTCGACCACCAACGCTCGCTGCTGACGCTGGGGAACAGCCACCTCAAGCAGCGCATCGCGGCG
CTCGCGCGGGACAAGATCTTCAAAGATGGTGACCGGCATTGCCAC-CCCTCGCAATT----TATTTCGAAATTTCTCACC
GGCCACCGTCCGAATTCAATTCAATTCAAAACA-ATCC---ACCCC----TTTGCTAACTAACT----CCCTGTGCGTGA
ACGAATCTGTTGTGCGCGCTCAGCTCATCAGGAGGCACTGAAGAAGGAGATAGAGAGGCTGAGGCAAATCTACCAGCAGC
AG---AGCCTTAGGAATGTAGAACCCCCGGCACACGACGACGGTCGTCCCCTGGCCCGCAGCG---ACAACAACGGCTTG
ATCGCCGGCGAGGGGACCGCCGCACCCTCGTGAT--------CAAGATCCGGCCCGT----CGGCCTCAGGACAACCAAG
TGTTGTCGTTGTTCTTCTTGCTGCC---GT------TGTTAGGATTTGGTGCACTGCATTGGCTTGGTTTGCA-------
----T----TCTTCGGGGTGTGAT--------GA-----TGTATGTAAGTCAGTTTGTTCTTTCCGGTGGGTGGTTGCCA
ATTTGTTCATTCTTGGTTCC----TCTATCTGCTCCTGATTATTCTTCTCTACTTCCCCTGATTTGTAATTTTTTTCCCC
GGCATTTTGGGCGAAGGTTGTAGCTAAGGATTTGTAA---CTCAGATTGGTTGAGGTTGAGTGGTTTCATTGCTTGGCGG
GTTTTGTTCT-AT-TTCTG----TTCAATCAAATGCAATGTTTTCTC---------------------------------
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>chr2D_764
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--------------------------------------------------------------------CCCGATTTAGCT
CAGTGTGAAGCTGACCCCCCACGCCATCCATTCGCGGATTCGCCCA-TTGTTTCCACGGCGGCGGCCAGCGGCAGCGGCA
ACGTGAGCGAAAATGAGGGCCGTACAATTTCTG-----GCATGGCCCGAGCCTACATTACCGCCCGAGCCCCCGGCACTG
CAAAGGTTTGGGCGTTGCGCCATCGATCGCGCCCGCTGCCTGCGCCTGCGCCGGTTGATTGATTCGGGCGCGCGGT----
CCCGGCCATGGCGCAACTACCGCCCAAGATCCCCACCATGGCGCCGGCCTGGCCGGAGTTCGGGGGCGGGCACCACCACA
G------CGCCCACGCCCGCCACCACCATCACCAACGCAGCCCCTCCACGGGCGCCTTCCTCGCCGAGTCAATGCCGCCA
CTCCCGCCCCCAGCGCCCGCCAGTGGGGACGGGGCGCAGCCGCAGCCTTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGCGGCGCGCACCGCCGCACGGTCAGCGACTCCATCGCCTTCCTCGACGAAAGCAATGCCGCTGTCG---GGG
CGAACGAGTTCGACCGCCTCGACGACAGCCAGCTCATGTCCATTTTTTCCGACGAGTTGGCCCCGCAGCGGCAGGCGCAG
GCG---GCGAGCGCGTCGTCGCCGTCCGATCACAACAGCATCAACGACGAGAAGCAGGACAAGGGCGACACCGAGGAGGC
GCAGAGCGAATGCAATGGCGAC---GGCGCGGCGCCTCGGCAGCCGTCCTCGCCCGCCATAGTCGATCCCAAGCGGGTCA
AGAGGTGATTTTTTTT-C-TTTT-A---CTCTTAGAATTACGACAATGCACAGCTCCGAAAGGTAGAATTCCCCGATTTC
TCAGCGTCCTCGTCGCCACATTCGCAGGATCCTTGCAAACCGGCAGTCGGCGCAGCGGTCGCGCGTGCGCAAGCTGCAGT
ACATCTCGGAGCTCGAGCGCAGCGTCACGTCGCTCCAGGTCCATCGAATT---------TCGAGCTTGATTTCCCCGCCT
CCAAAGCAAAAAACTCCGTGA--ATTTGACCTGGAGACTGTGCTCCC--------GAGCAGACGGAGGTGTCGGCATTGT
CCCCGCGCGTGGCGTTCCTCGACCACCAACGCTCGCTGCTGACGCTGGGGAACAGCCAACTCAAGCAGCGCATCGCGGCG
CTCGCGCGGGACAAGATCTTCAAAGATGGTGACCGGCATTGCCACTCCCTCGCGATT----TATTTCGAAATTTCTCACC
GGCCACCGCCCGAATGC----CG-----AAACA-ATCC---ATCGC----TTTGCTAACTAACTAACCCTCTGTGCGTGA
ACGAATGTGTTGTGCGTGCTCAGCTCATCAGGAGGCACTGAAGAAGGAGATAGAAAGGCTGAGGCAAATCTACCTGCAGC
AG---AGCCTTAGGAACGTAGAACCCCCGCCACACGACGACGGT---CCCCTGGCCCGCGGCG---ACAACAATGGCTTG
ATCGCCGGCGAGGGGACCGCCGCACCCTCGTGAT--------CAAGATCCGGCCCGTCGGCCGGCCTCAGGACAACCAAG
TGTTGTCGCTGTTCTTCTTGCTGCC---GT------TGTTAGGATTTGGTGCACTGCATTGGCTTGGTTTGCA-------
----T----TCTTCGGGGTGTGAT--------GA-----TGTATGTAACCCAGTTTGTTCATTCCGGTGGGTGGTTGCTA
ATTTGTTCATTCTCGGGTCC----TCTGTCTGCTCCTGATTATTCTTCTCTACTTCCCTTGATCTGTAATTTTTT-CCCC
GGCATTTTGGGCGAAGGTTGTAGCTAAGGATTTGTAA---CTCAGATTGGTTGAGGTCGAGTGGTTTCATTGCTTGGCGG
GTTTTGTTCT-GT-TTCTG----GTCAATCAAATGCAATGTTTTC-----------------------------------
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>chr2A_764
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--------------------------------------------------------------------CCCGATTTAGCT
CAGTGTGAAGCTGACCCCCCACGCCATCCATTCGCGGATTCGCCCA-TTGTTTCCGCAACGGCGGCCAGCGGCAGCGGCA
ACGTGAGCGAAAACGAGGGCCGTACAATTTCTG-----GCATGGCCCGAGCCTACATTACCGCCCGAGCCCCCGGCACTG
CAAAGGTTTGGGCGTTGCGCCATCGATCGCGCCCGCTGCCTGCGCCTGCGCCGGTTGATTGATTCGGGCACGCGGT----
CCCGGCCATGGCGCAACTGCCGCCCAAGATCCCCACCATGGCGCCGGCCTGGCCGGAGTTCGGGGGCGGGCACCACCACA
G------CGCCCACGCCCGCCACAACCATCACCAACGCAGCCCCTCCACGGGCGCCTCCCTCGCCGAGTCAATGCCGCCG
CTCCCGCCCCCGGTGCCCGCCAGTGGGGACGGGGCGCAGCAGCAGCCTTCCTGGGTCGACGAGTTCCTCGACTTCTCGGC
CGCCAAGCGTGGCGCGCACCGCCGCACGGTCAGCGACTCCATCGCCTTCCTCGACGACAGCAATGCCGCCATCG---GGG
AGAACGAGCTCGACCGCCTCGACGACAACCAACTCATGTCCATTTTTTCCGACGAGTTGGCCCCACAGCGGCAAGCGCAG
GCG---GCGAGCGCGTCGTCGCCGTCTGATCACAACAGCATCAACGACGGGAAGCAGGACAAGGGCGACACCGAGGAGGC
GCAGAGCGAATGCAATGGCGAT---GGCGCGGCGCCTGGGCAGCTGTCCTCGCCCGCCACAGTCGATCCCAAGTGGGTCA
AGAGGTGATTTTTTTT-CCTTTT-A---CTATTAGAATTACGACAATGCATAGGTCCGAAACGAAGAATTGTCTGATTTC
CCAGCGTCCTCGGCGCCACATTCACAGGATCCTTGCAAATCGGCAGTCGGCACAGCGGTCACGCGTGCGCAAGCTGCAGT
ACATCTCGGAGCTTGAGCGCAGCGTCACGTCGCTCCAGGTCCATCGAATT---------TCGAGCTTGATTTCCCTGCCT
CCAAAGAAAAAACACACACCATGAATTGACCTGGAAACTGTGCTCCC--------GAGCAGACGGAGGTGTCGGCATTGT
CCCCGCGTGTGGCATTCCTCGACCACCAACGCTCACTGCTGACGCTGGGGAACAGCCACCTCAAGCAGCGCATTGCGGCG
CTCGCGCGGGACAAGATCTTCAAAGATGGTGACCGGCATTGCCAC-CCCTCGCAATT----TATTTCGAAATTTCTCACC
GGCCACCGTCCGAATTCAGTTCA-----AAGCA-ATCC---ACCCC----TTTGCTAACTAACT----CTCTGTGCGTGA
ACGAATCTGTTGTGCGTGCTCAGCTCATCAGGAGGCACTGAAGAAGGAGATAGAGAGGCTGAGGCAAATCTACCAGCAGC
AG---AGCCTTAGGAACGTAGAACCCCCGGCACACGACGACGGC---CCCCTGGCCCGCAGCG---ACAACAATGGCTTG
ATCGCCGGCGAGGGGACCGCCGCACCCTCATGAT--------CAAGATCCGGCCCGT----CGGCCTCAGGACAACCAAG
TGTTGTCGCTATGCTTCTTGCTGTTGTT----------TTAGGATTTGGTGCATTCCATTGGCTTGGTTTGCA-------
----T----TCTTCGGGGTGTGAT--------GAGATTATGTATGCAACTCAGTTTGTTCATTCCGATGGGTGGTTGCTA
ATTTGTTCATTCTCGGGTCC----TCTGTCTGCTCCTGATTATTCTTCTCTACTTCCCCTGATCTGTAATTTTTT-CCCC
GACATTTTGGGCGAAGGTTGTAGCTAAGGATTTGTAA---CTCAGATTGGTTGAGGTCGAGTGGTTTCATTGCTTGGCGG
GTTTTGTTCT-AT-TTCTG----GTCAATCAAATGTGATGTTTTCTC---------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS----------------------------S-------------------------SS---SSSS
SS-S-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSS---------SS---S-------
-----------SS-------S---S--S-------S--------------------------------------------
-----S--------S----------S--------------------------------------------------S---
------------S----------S---------S-------------------------------S--------------
--------------S---------S---------------------S---------------------S-------SSSS
----------------------------S------------------------------------S--------------
-SSSSSS-------------------------------------------------------------------------
---------S-SSSSSS-----------------S---------------------------------------------
----------------------------------------------------------S------------S--SSS---
---------------------------------------S------------------------------S--------S
-----------------S-------------------------------------------S------------------
----------------------SSS-------------------------------------S-----------------
---------S----S----S--SS-SSS---S------S--------------------S--------------------
--S-----------------S-----------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------S---S----SSSSS-SSSSSSSS-------------------------
-------------------S------------------------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------------------S----------------
--SSS---------S-----S-------S--S----S--------------S-------------S-----S----SS--
------------------------S--------S-------------------------------------------S--
------------------------------------------------------------SSS-S-S--S-SSSSSSSSS
SSSS-------S----------S-SSSSSSSS---------------------SS-------S-----------------
----------------------S------------------S-----------------------------------S--
------------------S------------------SSS----------------------------------------
----S--------------SSSS------------------------SSSSSSSSSSS----SSSSSS-SSS-SS-S-S-
S-S-S-S-SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS------------------S-SSS-S-------------------------S--------------------SS
SS-----S---S--S------S----------SSS-SSSSSSSSSSSS---S----------------------------
----SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_638
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------GGTGCTAGCTGTCCTTCTGG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_1628
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CCTCCCAGAATCACGGCAAT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_1502
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AACGACGAGAAGCAGGACAG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_3012
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GGGGCATCTCATTCCTTGCT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
