>input_sequence_56819
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------ATGGCGGCCATGTCGTCGCGGACTGGTCACGCCCCGCCGGCGGCGCCGATGGCGACGGCTGACCTGGAGGCCGC
CATCGCGGCGCTCCCCGTCAGGAAGCAGCGCCTGCGGGAGACCTTCGACCGCCTCGTCGCCTGCGCGCCGCCCCATTACC
ATCTCCCCTTCACCTGGGACGACATCGACGCCCATGTCTCCTCCCTCCACGCCTCCCTCTCCCTCCGCTTCCGCCAGATG
C---------AGCAGCAGCCCCACCCCGGCGCCCCCGTGTCCGCAACCGCGATCCACGACGCCGAGCAGCCCCACCCCAG
CGTCCCCGTGCCCGCAACCGCAACCCTCATCGGCGAGCAGCCCGACCCTTGCGTCCTCGTGTCCGCAACCCCC-------
-----------GATGAGGAGATGGTTAGGGAGGATGAAGACGCCTCTCCTGTTCAAGAGGACGATAGAGTGGAGGACGCC
GGCATGGGCTTTGTGGGGGCGCCATGGCGCCAGGCCGGAGGAACTCGTGATCAAGAGTTTCCTGTTCCGGTGCGGGCTCA
CTACGCCCGGCACGCCGGCAGCCCTATGCTTCGGCAGCCATACACGGCGTACCAGCAGCCTGATGTGCTTAGCCAGCTGA
ATCTTCCCATGTTCCAGCGCCAACAGCCATACACGCCGTACCACCGGCAGGAGTTTCCTGCCATGGCGGG---GGCCATG
AATAGCTACAATATTCCTCCGATTGTCCAGCA---------------------------------GCCGTACTACAATAT
TCCTCCGATTGTGCAGCGGCCGTACGTGCCGTAC---------------TTCAGGCGAGAATTCTCCCCTGATTTCAGGC
AAGAATTCTTCCCTGATGATGATGTGACGAGGCAGCCCTTCAGGAGGCAGGAA---------------------TTCTTC
CCTGATGATGATGTGACGAGGCAGCCC------------------------------TTCAGG-----------------
----AGGCAGGAATTCTTCCCTGATGATGATGTGACGAGGCAGCCCTTCAGGCAAGAATTCTTCCCTGAAGTGACGAGGC
AGCCCCCGATGGGCATTGATCATGTGCTCCAGGAGCAG---TACATGGCAATGGCGCACCGTGAACCGTACGTTCCACGG
CAGCAGTACATGGCGCACCACCAGCCACACTTCCCTGATGCACAGGCTGCTAGTGCTCATGGTCAGGGATCAAGCA---C
TACGCGTCGATCACCGAGCAGGATTACCTATCCGGACAACATCAATGTGGGTATTAGCGAGCCAAGTAAGAAGAGCAGGA
CTATC---------------------------------------------CACAAGAACACCATATATGATTATTTCTGA
--------------------------------------------------------------------------------
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------------------
>chr1D_1_TraesCS1D01G036100
AGTGTTTGTCTTTAGTGGATGCTATCTTCGTTCGTCTGTGTTCGCGTGTCTACATGCTGGATCCTTCCAATCTGCGCTTC
TCTTCGTCGGCGATGCTTGTTTTTCTAGTGCGTTGGTCCTATGGGGTCTTAGCAC--CATGACTTCCCGACGGTTTACTA
CAACAAGGTTTGCCCGGCCCCGATGAGTGAGGGGTGAAGAAGGCGGCACGCCTTCGGCTCG----CTCCAGTGCTAGTAG
TCGCCGCTAGGTGGTCTACGAACATAGATGTGTTTTTTACTTCTGCTTACTTCTGGTGTTCTTTGTACTATCTTGTCTTG
TCAGTTGATT-ATATATCAAAAAAGGTATCCCAAGAAAAACAGTCGTCGAAAGAGAAAAAAGAAAAAGAAACAGTCGAAT
GAAACGTTAGCGCCTAAAAAA-GAAGAAACACTCTAATAGCGAGCGGAATATGGGCCGTAGAGTGAGTGGAGTGAGAGCA
ACTAAAAGAAATATGCTAGTAGAGTGATT-----GCAGCAGAGCAGCGAGTGGACAGCGACTCGGCCCAACCCAGGAGCC
ATCCCGCCCCTGCACGTGGCGCCCATCCCGCGGACGCGTGCGCGGCCACCCACCGGATGGCCGCCGTACCCGCCGCCCCG
GCCGGATAAAGCCGTCGCCCCGACGCCCTAGGGTTTCCGCCCTCGCCCCCAACCCTAGCCGCCCGCCTCCGACCTCCCTC
CCTCCCCCTCCCCT------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTCCGCCCCCGCCGTCGGCCCTCGTCCGCGCGGCCACCC
ACCTTCCCGATCCCGGCCGGCATGCCCTCGACCTCCGCCTCGTTCCCCTGACCCTCCTCCGCGCCGGAGAAATCGCCTCC
TTTCGTCGCCTTGGCCTCGGTCTTCCCCGCCGCCGGCGATTCGTCGCCGGCGCTGCATCCCGGCTGCTCCCCTCGCCTTC
CTCAACAACTCCGCATCGGCCTCCCCAAGCTCCTGCCCGCCTCCTCCTTGGTTCGTC------CGTCCTCGTGTGTTCCC
CGTCCCATGGCGGCCATGTCGTCGCGGACTGGTCACGCCCCGCCGGCGGCGCCGATGGCGACGGCTGACCTGGAGGCCGC
CATCGCGGCGCTCCCCGTCAGGAAGCAGCGCCTGCGGGAGACCTTCGACCGCCTCGTCGCCTGCGCGCCGCCCCATTACC
ATCTCCCCTTCACCTGGGACGACATCGACGCCCATGTCTCCTCCCTCCACGCCTCCCTCTCCCTCCGCTTCCGCCAGATG
C---------AGCAGCAGCCCCACCCCGGCGCCCCCGTGTCCGCAACCGCGATCCACGACGCCGAGCAGCCCCACCCCAG
CGTCCCCGTGCCCGCAACCGCAACCCTCATCGGCGAGCAGCCCGACCCTTGCGTCCTCGTGTCCGCAACCCCC-------
-----------GATGAGGAGATGGTTAGGGAGGATGAAGACGCCTCTCCTGTTCAAGAGGACGATAGAGTGGAGGACGCC
GGCATGGGCTTTGTGGGGGCGCCATGGCGCCAGGCCGGAGGAACTCGTGATCAAGAGTTTCCTGTTCCGGTGCGGGCTCA
CTACGCCCGGCACGCCGGCAGCCCTATGCTTCGGCAGCCATACACGGCGTACCAGCAGCCTGATGTGCTTAGCCAGCTGA
ATCTTCCCATGTTCCAGCGCCAACAGCCATACACGCCGTACCACCGGCAGGAGTTTCCTGCCATGGCGGG---GGCCATG
AATAGCTACAATATTCCTCCGATTGTCCAGCA---------------------------------GCCGTACTACAATAT
TCCTCCGATTGTGCAGCGGCCGTACGTGCCGTAC---------------TTCAGGCGAGAATTCTCCCCTGATTTCAGGC
AAGAATTCTTCCCTGATGATGATGTGACGAGGCAGCCCTTCAGGAGGCAGGAA---------------------TTCTTC
CCTGATGATGATGTGACGAGGCAGCCC------------------------------TTCAGG-----------------
----AGGCAGGAATTCTTCCCTGATGATGATGTGACGAGGCAGCCCTTCAGGCAAGAATTCTTCCCTGAAGTGACGAGGC
AGCCCCCGATGGGCATTGATCATGTGCTCCAGGAGCAG---TACATGGCAATGGCGCACCGTGAACCGTACGTTCCACGG
CAGCAGTACATGGCGCACCACCAGCCACACTTCCCTGATGCACAGGCTGCTAGTGCTCATGGTCAGGGATCAAGCA---C
TACGCGTCGATCACCGAGCAGGATTACCTATCCGGACAACATCAATGTGGGTATTAGCGAGCCAAGTAAGAAGAGCAGGA
CTATC---------------------------------------------CACAAGAACACCATATATGATTATTTCTGA
T---AGACAGCAGGAGCATTGCTATGATTCCCGGAGACCTTCTCCGTTGATTAAGAGAAAC-------------------
--------CAAGTGAAGACCTTTA-------------------------------------CAGCCGGATGCGCAAACT-
---------AGTCCAAAGGCACCACCGT-GTGGGCAACATTCACAAGGCCTC---ACTAAGAAAGGAATCAGAAAGACAT
GGCACAACCTGCACAATGCTGCTGTCTTGTGACGGTGGGCAGCGGTGGCAGATCACTACGGAGCAATGCAAGCACCGATG
GAGGAGTGACGCCGGTGACATGGTCTTCTGCATGTGAGCCGTGGAGGCACA-CGTGTGGGGAAGATGCCGAGGTATATTT
TTCGTGGTGTCACAGGGATGTGTGGGTGTGAGAGACGACCCATTCCGCATCTCAGTCTGGGCATACACATGCTGCGATTT
G--GACTCGGTGGGCTGCCGGTCAATGCCTTGCATCGCTCGACTGACGCCTAGCATCGGTCAAACATGAATCACATGCCT
AGCCTTGAGAATAATACTATCCTCTCCATAAGATTTATCATTATATGTTCACATATTTTTTTAGTTCA------------
-----------------------------------------TCATGCTATTATTTTCACTATTAAAAATGTAATTTTATA
TAATTGTAAACCGTCATCATAGATGATTCCATGAGCTCATTCGACTGAGGTAATAGGGTTGCAAAAAAATTCGGAGGCAG
TAACAAAAACCATATGTTTTAAAATGGCAAACAAAAAGTAGAAGTTTGTTGGCCATTAGTGGATAGAGGTTTAAATTGCA
CTACCCTTGCATGTATTGTCATTAC-AAGGGTTGTTACAAGTCGGATCTACTAGAGTACTGCTTCATCAAAGGTTATTAG
AGCGATGATTGGGGATCTCACGAGTTTGCGGAAAGGGAATAAGTTTGTGGAGGGAGAAAATTACCTTTATACACACCATC
CCGGGCCTATCTGATAGCCTTATTCCCTCGCCGCATTTTGACAGTGAGATACATCTCGGCTCTACCTGCTAGATCAGCCA
CTGATGTGTCGTTCATCA
>chr1B_4
---GTTTGTCTTCGGTGGATGCTGTCTTCGTTCATCTACGTTCGTGTGTCTACAGGTTGGATCCTTTCGATCTGCGCTTC
TCTTCATCGTCGATGCTTGTTGTTCTAGTTCGCTGGTCCTATGGGGTCTTAGTACCACATGACTTCCGGACAGTCTACCA
CAACAAGATTTGTCCGGCTCCGATGAGGGAGGGGTGAAGAAGGCGGCATGCCTTCGGCTCGCTCACTCCAGTGCTAGTAG
TCGTCGCTAGATGGTCTATGGACATACATGTA-TTTTATCTTCTGTTTACTTCTGGTGTTCTTTGTACTACTA--TCTTG
ACAGTTTATGAATATATC--GAAAGTTATA-----AAAAACA---GTCGAAAGAGGAAAA--GAA---AAACAGTCGAAT
GAAACGTTAGCGCCTAAAAAATGAAGAAAAACTTTAATAGCGAGCGGAATATGGGCCGTAGAGTGAGTAGAGTGAGAGCG
ATTAAGACAAGGA----------------------------AGTAGCGAGTGGGCAGCAAGTCGGCCCAACCCAGGAGCC
ATCCCGCCCCTGCACGTGGCGCCCATCCCGCGGACGCGCGCGCGGCCACCCACCGGATGGCCGCCGTACCCGCCGCCCCG
GCCGGATAAAGCCGTCGCCCCGACGCCCTAGGGTTTCCGCCCTCGCCCCCACCCCTAGCCGCCCGCCTCCGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCACCGCCGCCGTCGGCCCTCGTCCGCGCCGCCACCC
ACCTTCCCGATCCCCGCCGGCATGCCCTCGACCTCCGTCTTCCTCCCCTGAGCCCCCA---CGCCGGAGAAATCGCCTCC
TGTCGCCCCCTTGGCCTCGGCCTTCCCCACCGCCGGCGATTCGTCGCCGGCGCTGCACCCCGGCTGCTCCCCTCGCCTTC
CTCAACAACTCCGCGTCGGCGTCCCGAAGCTGCTTCCCCCGTCTTCCTTAATTCGTTCGGCTTCGGCTTCGTGTGTTCCC
CATCCTATGTCGGCCGTGTCGTCGCGGACTGGTCGCGCCCCGCCGGCGGCGCCGATGGCGACGGCTGACCTGGAGGCCGC
CATCGCGGCGCTCCCCGTCAGGAAGCAGCGCCTGCGGGAGACCTTCGACCGCCTCGTCGCCTGCGCGCCGCCCCATTACC
ATCTCCCCTTCACCTGGGACGACATCGACGCCCATGTCTCCTCCCTCCACGCCTCCCTCGCCCTCCGCTTCCGCCAGATG
CAGCAGCAGCAGCAGCAGCCACACTCCGGCGTCCCCGTGTCCGCACCCGCGGCCCCCGACGACGAGCAGCCCCACCCCGG
CGTCCCCGTGTCCCCCACCGCAACCCCCATCGGCGAGCAGCCCGACCCTTGCGTCCTCGTGTCCGCAACCCACGGCGAGT
CCATCCAGGAGGACGAGGAGATGGTTAGGGAGGAGGAAGACGCCTCTCCTGCTCAAGAGGATGATAGAGTGGAGGACGCA
GGCATGGGCTTTGCGGGGGCGCCATGGCGCCAGGCCGGAGGAACTCGTGATCAAGAGTTTCCTGTTCCGGTGCGGGCTCA
CTACGCCCGGCACGCCGGCAGCCCTATACTTCGGCAGCCATACACGGCGTCCCC---GCCTGATGTGCATAGCCAGCTGA
ATCTTCCCATGCTCCAGCGACAACAACCATTCATGCCGTACCAGCAGCAGGAGTTTCCTGCCATGGCGGTGGTGGCCATG
AATAACTACAATATTCCTCCCATGGTCCACCAGCCGTACTACAATATTCCTCCGGTGGTCCAGCAGCCGTACTACAATAT
TCCTCCCATGGTGCAGCAGCCGTACTTCAGGCAAGAATTCTCCCCTGATTTCAGGCGAGAATTCTCCCCTGATTTCAGGC
AAGAATTCCTCCC-------------------------------------------------------------------
--------TGATGTGACGAGGCAGCCCCTGATGGTGCAGCGGCCGTACTCGCCGTACTTCAGGCGAGAATTCTCCCCTGA
T---------------------------------------------TTCAGGCGAGAATTCCTCCCTGATGTGACGAGGC
AGCCCCCGACGGGCATTGACCATGTGCTCCAGGAGCAGCAGTACATGGCCATGGCGCACCATCAGCCATACTTCCCACAG
CAGCAGTACATGGCGCGCCACCAGCCCCACTTCCCTGCTGCACAGGCTGCTAGTGCTCATGGTCAGGGATCAAACGCTGC
TAAGCGTCGACCGCTGAACAGGAGTATCGATACGGACAACATCAATGTGCGTATTAGCGAGCCAAGTAAGAAGAGCAGGA
CTATCCGCGAGCAC---------------------------GAGCCATATCAAAATAAGACCATATATGATTATTTCTGA
TGATAGACACCAGGAGCATTGGTATGGTTCCCAGAGACCC---CCTTTGATTAAGAGAAGC-------------------
--------CAAGTGAAGACCTTTACACCCTTTGATTAAGAGAAGCCAAGTGAAGACCTTTGCAGCCGGATGCGCAAACT-
---------AGTCCAAAGGCGCCACCCGCGTGGGCAACATTTGCAAGGCCTTATTACTGAGAAAGGAATCACAAAGACAT
GACACAACCTACATAATGCTGTTGTCTTGTGACGGTAGGCAGCGGCGATGGATCACTATGGAGCAATGCAAGCACCGACG
GAGGAGTGATGCCGGTGACATGCTCTTTTGCTTGTGAGCCATGGAGGCACGCCGTGTGGGGAAGATGCCGGGGTATGTTT
TTCGCGGTGTCACAGGGATGGTTGGGTGAGAGGGATGACCCAGTC-GCATCTCATTCTA-GCATACACATGCTGCGAATT
GATGACTTTGTAGGCTGCCGGTCAATGTCTCACATCGCTCGATTGACGCCTAGCATCGGTCAAACATGAATCACATGCCT
AGCCTTGAGAATAATGCTATCCTCTCCATAAGCATTATCATTATATGTTGACATATTTTTTTAGTTCAACACAACTAAAT
GGTGTCATTTTGTGACCATTTTCCTTTTGACATGTTTTTCATCATATTATTATTTTCACTATTAAAAAAGTAATTTTATA
TAATTGTAAACTGTCATCATAGATGATTCCCTGAGCTCATTAGAGTGAGGTAATAGGGTTGCAAAAAATTTCGTTGGCAC
TAAAAAAAACCATATGTTTTAAA-TGGCAAACATTCTGTAGAAGTTTGTCGACCATTTGTGGATAGAGGTTTAAATTGCA
CTACCCTTTCATGTATTGTTATTACAAAGGGTTGTTTCAACTGGGATCTACTCGAGTACTGCTTCATCAAAGGTGATTAG
AGCGGTGATTGGGGATGTGACGAGTTTGCGAAGAGGGGATACGTTTGTGGAGAGAGAAAACTACCTTCATATGCACCATC
CTGGGCCTATCTGATAGCATTATTCCCTTGCCGCAGTTTGACTGTGAGATACATCTCTG--CTACCTGCTAGATCAGCCA
CTGATGTGTCATTCATCA
>chr1A_220
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CTCCAGTGCTAGTAG
TCATGGCTAGGTGGTCTACGGACATAGATATGTTATTTACTTATGTTTACTTCTGGTGTTCTTTGTACTA-----TCTTG
TCAGTTGATT-ATATTTC--AAAAGGTATCCCAAGAAATATA---GTCGAAAGAGAAAAA--AAAAAGAAACAGTCGAAT
GAAACGTTAGCGCCTAAAAAA-------ACACTCTAATAGCGAGCGGAATATGGGCCGTATACTGAGTCGAGTGAAAGCA
ACTAAAACAAAGGC---AGTAGAGTGATTAGACAGCAGCACAGCAGCTAGTGGGCAGCAAGTCGGCCCAACCCAGGAGCC
ATCCCGCCTCTGCACGTGGCGCTCATCCCACGGGCGCGCGCGCGGCCACCCACAGGATGGCCGCCGTACCCGCCGCTCCG
GCCGGATAAAGCCGTCGCCCCGACGCCCTAGGGTTTCCGCCCTCGCCCCCAACCCTAGCCGCCCGCCTCCGACCTC----
--TCCTCCCCCCCT------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTCCACTCCCGCCGTCGGCCCTCGTCCGCGCGGCCACCC
ACCTTCCCGATCCCCACCGGCATGCCGTCGAACTCCGCCTGCCTCCCCTGACCCTCCA---CGCCGGACAAATCGCCTCC
TGTCGTCCCCTTGGCCCTGCTTTTCCCCGCCTCCGTCGATTCGTCGCCGTCGCTGCCCCCC-------------------
---------------------TCCCCAAGCTCCTGCGCCCCTCCTCCTTGACTCGTC------CGTCCTCGTGTGTTCCC
CATCCCATGGCGGACATGTCGTCGCCGACTGGCCAGGCCCGGCCGGCGGCGCCGATGGCGACGGCTGACCTGGAGGCCGC
CATCGCGGCGCTCCCCGTCAGGAAGCAGCGCCTGCGGGAGACCTTCGACCGCCTCGTCGCCTGCGCGCCGCCCCATTACC
ATCTCCCCTTCACCTGGGACGACATCGACGCCCATGTCTCCTCCCTCCACGCCTCCCTCTCCCTCCGCTTCCGCCAGATG
C---------AGCAGCAGCCCCACCCCGGCGCCCCCGTGTCCGCAACCGCGATCCACGACGCCGAGCAGCCCCACCCCTG
CGTGCCCGTGCCCGCAACCGCAACCCCCGCCGACGGGCAGCCCGACCCTTGCGTCCCCGTGTCCGCAACCCACGGCGAGT
CCATCCAGGAGGACGAGGAGATGGTTATGGAGGATGAAGACGCCTCTCCTGTTCAAGAGGATGATAGAGTGGAGGACGCA
GGCATGGGCTTTGTGGGGGCGCCAATGCGCCAGGCCGGAGGAACTCGTGATCAAGAGTTTCCGGTTCCGGCGCGGGCTCA
CGCCCTGG---ACGCCGGCAGCCCTATGCTTCGGCAGCCATACACGGCGTTCCC---GCCTGAAGTGCATAGCCAGCTGA
ATCTTCCTATGCTCCAGCGACAACAACCATACATGCGGTACCAGCAGCAGGAGTTTCCTGCCATGGCGGTGG---CCAGG
AATACCTACAATATTCCTCCGATGGTCCAGCAGCCGTAC---------------------------CCGTACCACAATAT
TCCTCCGATGGTGCAGCGGCCGTACGTGCCGTAC---------------TTCAGGCAAGAATTCTCCCCTGATTTCAGGC
AAGAATTCTTCCCTGATGATGATGTGACGAGGCAGCCCTTCAGGCAAGAATTCTCCCCTGGTTTCAGGCAAGACTTCTTC
CCTGATGATGATGTGACGAGGCAGCCC------------------------------TTCAGGCAAGAATTCTCCCCTGG
TTTCAGGCAAGAATTCTTCCCTGATGATGAAGTGACGAGGCAGCCCTTCAGGCAAGAATTCTTCCCTGATGTGACGAGGC
AGGCCCGGATGGGCATTGACCATGTGCTCCAGGAGCAG---TACATGGCAATGGTGCACCATCGACCGTACTCCCCACAG
CAGCAGTACATGGCGCACCACCAGCCACACTTCCCTGTTGCACAGGCTCCTAGTGCTCATGGTCAGGGATCAAACA---C
TAAGCGTCGACCACCGAGCAAGACTACCGATACGGACAACATCAATGTTCGTAGTAGCAAGCCAAGTAAGAAGAGCAGGA
GGAATTTCCACAAGCACCATGGCAAACCAAAGCCAAACAATGAGCCATTTCAAAAGAAGACCATATATGATTATTTTTGA
T---AGACAGCAGGAGCATTGCCATGATTCCGGGAGACCT---CCGTTGATTTAGAGAAACAAGTGAATACCATTACAGA
TGAAAAAACAAGTGAAGACCATTA-------------------------------------CAGACGGATTCCCAAACTA
GCAAACACAAGTCCAAAGGCACCACCGT-GTGGGCAACATCCGCAAGGGCAACATTTGTAAAATT---------------
-------------------TGCTGTGTTATGACGGTCGGCAGTGGCGGCAGGTCACTACGGAGCAATGCAAGCGTCCACG
AAAGTGTGATGCCGACGACATGCTCTTCTGGATGTGAGCCGTGGAGGGGACGTATGCGGGGAAATTGCAGTGGCATCTTT
TCCT-----TCACAAGGATGTGTGGGTGAGAAGGATGACCCACTCTGCATATCATTCTACGCATACACGTGCTTCAGTTT
GATGGCTTGGTAGGCTGCCGGTCAATGCCTCGCTTTGCTCGGCCGACACATAGCAATCAAAT---ATGAATCACATGCCT
AGCATTGAGAATAATACTATCCTCTCCCTAGGCTTTATCATTATATGTTGACATATGTTTTTAGTTCAACACAAA-AAAT
GGTGTCGTTTTGTGACCATTTGCCTTTTGACATGATTTTCATCATACTATTATTTTCACTATTAAAAAAGTA-TTTTTTA
TAATTGTAAACCGTCATCATAGATGATTCCATGAGCTCATTCGACCGAGGTAATAGGGTTGCAAAAAAATTCGGAGGCAG
TAGCAAAAACCATATGTTTTAAA-TGGCAAACAAGCAGTAGAAATTTGTCGGCCATTTGTGGATAGAGGTTTAAATTGCA
CTACCCTTGCATGCATTGTTATTACAA-GGGTTGTTGCAAGTGGGATCTACTAGAGTACTGCTTCATCAAAGGTGATTAG
AGCGATGATTGGGGTTGTGACGAGTTTGCGGA--GGGAATAAGTTGCTGGAGAGAGAAAAGTACCTTTATATGCAACATC
CTAGGCCTATCTGATAGCCTTATTCCCTTGCCACATTTTGACAGTGAGATACATCTCGG--CTACCAGCTAGATCAGCGA
CTGATATGTCATTCATCA
>SNPs
SSS---------SS---------S---------S---SS-----S---------S-S---------S-S-----------
-----S---S-----------S-------S--S-------------------S--------------S---S--S---S-
-------S----S-----S--------S--------------------S-------------------------------
---S----------------S------------------------S------------------------SSSSS-----
------------------SS----------------------SSS---------------SS------------------
--------------------------------------------------------------------S-----------
-------S---S-SSSS-----------------------S------------S----S-S-------------------
--------------------------------------S-----------------------------------------
----------------------------------------------------------------------------SSSS
SS---S--S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------S-------------------------SSS--------------SSSS-------------------
-S-----S-------------------------------------------------S----------------------
--------------S-----S-----------------S-----------S-----------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------S--------------------------------------------S--------
-------------S-----------------------------------------------S-----------------S
--------------------------------------------------------------------------------
--------------------------------------------------S--SSSS-----------S-----------
-----------S-------S-----S-------S---------S-S-----------------------S----------
----S------------------S--------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------SSSS-SSSS---------------------------
--------------------------------------------------------------------------------
---------S--------------------S--------------------------------------S----------
-------------------S----------------------------------------S-S--------S-S----S-
-------------------------------------S-----------------------------------S------
--S-------S------------S----S--S-----------------S------------------------------
----------------------------------------------------S-----S---------------------
----------------------------------------SSS-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------S------S------------S--------
-S--------S--S----------------------S--------S--------------------------------S-
---------S------------S---------------------------S-------------------S-----S---
----S-----------------------S---S--S------S--S--------S---SS--------------------
-------S---S------------------S-------------------------------------------------
--------------------------------S----------------S------------------------------
---------------------------------------------S----------------------S-----------
--------------------------------------------------------------------------------
-----------------------S----------SS-------------S-------S----------------------
-------------------S----------------S-----S-------------------------------S-----
----------------S-S-------------S-------------------S-------S----------SS-------
-S--------------------------S------------------------------SS-------------------
----------S-------
>forward_45
-------------------------CTTCGTTCGTCTGTGTTCGC-----------------------------------
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>reverse_1817
--------------------------------------------------------------------------------
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--------------------------------------------------------AGCCTGATGTGCTTAGCCAG----
--------------------------------------------------------------------------------
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>forward_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GCTCCAGTGCTAGTAG
TCGC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2392
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GTTCCACGG
CAGCAGTACAT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1135
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CCTTC
CTCAACAACTCCGCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2891
--------------------------------------------------------------------------------
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----------GCACAATGCTGCTGTCTTGT--------------------------------------------------
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------------------
