>input_sequence_56790
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------------------------------------------------------------------------ATGGCGTC
GGGAGAAGCGGCCATGCAGGTACACCATCTCGCCCCGTTTCTAGCCCTTCCGTCCAAGGAATTCAGTTGAGTTGCATGCT
CATGTGACATTCTTTCTTGGATCTGCAGACCTTCGTGCTGAGGGTGACCATCCACTGCCATGGCTGCAAGAAGAAGGTCC
GGAAGGTGCTCAAGAGCATCGAAGGTACTAGCGCCACCCTCCTCC-TTCTCCTCGCGCCGCTGCATTTTCGTGTGGCTTT
CGGCTTAATTGACTACCTAACTAAGTGGTCGT----CGTTTTGGTTGGGATGT------TCAGGCGTGCAGGACGTGAAG
GTAGACGCCCAGCTGCACAAGGTGATGGTGACGGGCACCGTGGACGCCGAGACGCTCATCAAGAGGCTGCACAAGTCAGG
CAAGCAGGCCCTGCCATGGCAACACAC---------GCCTGCCAAGAATCCCGACCCTGCGCCGCCAACCCCAGCC---G
ACGCCCCCGCGCCGGCCG---------AGGACGGCAGCAAGGATGCCGCTGTAGCGGACAAGAAGCC-------------
--------GGCGG---------AGGAGCCGCAGGCCGACAGCTCGGACAAGAGGCCGGAGCAGGAGACGGCCTCGGAGAA
GAAG---------------------------AAGCCTGAGACGGAGAAGGAAGCAGAATCTGAGAAGAAGGCTGGCA---
AGGAGGAGGAGGCGAAACCAAGGTCAAGCGACGAGGAAAAGAAAGACGGCGGCGAGGGCGCGGCGGCCGAG------CCC
AAAGCAGAGGGCACCGAGCCCGCGAGTGAACCC---------GCTGCCGCCGCAAAGGAGGCCGGCG---ATGATGAGGG
CGAGGCGAAGAAGAAACAGAGCAAGCCCAAGGACGC---------------CGATAGGTCCCTGT---------------
---CCCCAGCGCCGGCGCCGGCCCATGTGCCGAG------------GTACGCGCACCAGGAATTCAAC---------GCG
CCGCAGCCGGTGATGAGCTACAACATGGCGCAGCCGAGGGCGAGCGTGTCCCACTACGCGCCGCAGCCGGAGCGGGGCTA
CTC---GCAGCAGCAG---GCCGGGTACTCCTCCTACTCCA---------TGATGCAGCACCCACCGGCACCGGCGCAGC
AGGCCTACTCCCAGCAGGCG---CAGCCAATGCAGCAATGGTCGCCGTCGTACCTCTACATGCCGTACCCGCACGCGTCG
CCGGAGTCCTACTACCAGGACTACTATAGCCCGCCCGGGACGCACGCGTCGCCGCCGCCC---CCGCCGCCGCTCCACGA
CTCGTACCGCCTGTTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGA----------------------------
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--------------------
>chr5D_1_TraesCS5D01G039100
GCCTGAAAAATTCTAAAACAAAGAAGAAATGCATGCATTTTTTATGTTTCTGTGTATTATGCATTGTAAATCGTGAAGTA
AAAAGAAAGTGTGTCATTTCATTCAGAAGAGAAATATATGGATAGTTAAAGCATGAAAGATTTTAAAACAAACGAGGAAT
GCTTGTGTTTTGGGGTTTGCTCATTGTGATTAAGCTCAACCATGAAATATTTTAAGTAGTACATGTGGCAGAATTTGTTG
TTGTGCAGATGATACCCAACGGTTAATAGTGTT-CAGATTTGCTATATTTGCACAGGTAGATTGGCTTCATCCAAAGACC
AATATTAAAAATTATA---CATGGGCTACAGAGTGATGTAAAATTATTCGTATTAATTCCGAAAAAAAGTCTGAATTGGA
TAGTAACGTATATCTGATCGCCTTGAAAACGGTAATCATAACCAGTGAACAGCATTTTGATGGCAACTTTAGTTATCGCG
TGGATGCCAGTACGAT---AAAATTTGATGAAAAACAGA-----------GTTGCCGTGCTTGCTGATTGCCATGCTCAG
CCAACATAAATTGTCAACAAAATCACTCTCAAATATCATCCTCCCACCAAACGTTTATAGGGGTGAGTGTATACGTGTAT
GTAACGCTTGCGTCCGTACTTTGTTAAAAAAACATGAACGAAGCCACGGGCACGGCAGGTACCGTAGAATTCTTTCACGA
CGCCTGGTACCTA--------GGAACGGAACGGATACGCCGCCGCCGCCGCCTGTGTACTAACGATAAATACGGCCGCCG
CAGCAGAGCAGCCGCCCGGCCCATATGTCAGTGGCGTATGTGGTCGTACTCCATCCCCGCGTCCACCTCTATAA-GTTGA
GCACCGCATCTGCTGCCTCCCCTGAGCTCCCAGCGTCCT-----GAGAGCCACATACTCGAGCGCCCCTCCATCCTCATC
CTGCTCCCCAACCAAGAAGCGACACAACGGTGAGCAGTCCCCAGAGGCCAGAGCAGAGCGCACTCCCATCCCATGGCGTC
GGGAGAAGCGGCCATGCAGGTACACCATCTCGCCCCGTTTCTAGCCCTTCCGTCCAAGGAATTCAGTTGAGTTGCATGCT
CATGTGACATTCTTTCTTGGATCTGCAGACCTTCGTGCTGAGGGTGACCATCCACTGCCATGGCTGCAAGAAGAAGGTCC
GGAAGGTGCTCAAGAGCATCGAAGGTACTAGCGCCACCCTCCTCC-TTCTCCTCGCGCCGCTGCATTTTCGTGTGGCTTT
CGGCTTAATTGACTACCTAACTAAGTGGTCGT----CGTTTTGGTTGGGATGT------TCAGGCGTGCAGGACGTGAAG
GTAGACGCCCAGCTGCACAAGGTGATGGTGACGGGCACCGTGGACGCCGAGACGCTCATCAAGAGGCTGCACAAGTCAGG
CAAGCAGGCCCTGCCATGGCAACACAC---------GCCTGCCAAGAATCCCGACCCTGCGCCGCCAACCCCAGCC---G
ACGCCCCCGCGCCGGCCG---------AGGACGGCAGCAAGGATGCCGCTGTAGCGGACAAGAAGCC-------------
--------GGCGG---------AGGAGCCGCAGGCCGACAGCTCGGACAAGAGGCCGGAGCAGGAGACGGCCTCGGAGAA
GAAG---------------------------AAGCCTGAGACGGAGAAGGAAGCAGAATCTGAGAAGAAGGCTGGCA---
AGGAGGAGGAGGCGAAACCAAGGTCAAGCGACGAGGAAAAGAAAGACGGCGGCGAGGGCGCGGCGGCCGAG------CCC
AAAGCAGAGGGCACCGAGCCCGCGAGTGAACCC---------GCTGCCGCCGCAAAGGAGGCCGGCG---ATGATGAGGG
CGAGGCGAAGAAGAAACAGAGCAAGCCCAAGGACGC---------------CGATAGGTCCCTGT---------------
---CCCCAGCGCCGGCGCCGGCCCATGTGCCGAG------------GTACGCGCACCAGGAATTCAAC---------GCG
CCGCAGCCGGTGATGAGCTACAACATGGCGCAGCCGAGGGCGAGCGTGTCCCACTACGCGCCGCAGCCGGAGCGGGGCTA
CTC---GCAGCAGCAG---GCCGGGTACTCCTCCTACTCCA---------TGATGCAGCACCCACCGGCACCGGCGCAGC
AGGCCTACTCCCAGCAGGCG---CAGCCAATGCAGCAATGGTCGCCGTCGTACCTCTACATGCCGTACCCGCACGCGTCG
CCGGAGTCCTACTACCAGGACTACTATAGCCCGCCCGGGACGCACGCGTCGCCGCCGCCC---CCGCCGCCGCTCCACGA
CTCGTACCGCCTGTTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGATGTGATGGCGGCTC--------------
------------CGGCGACCGCCGGAAAAGTAGC---------CGGCCTCATAATCGT--CGTAAT----AGAG----AC
CTCTCTGGTTGTAGGTAGAG----TAGCTTGTTACTCTCTTCGATT-----GGGAGGTGGTCAAAGCTCTCCTTGACCAA
TCCTTTTTCTTCTTCTTCT-CTTCCTCTTTAATTTCTTCTTTTATTATTGCTACTATTACTGTTCTAAATAGAGCATGTA
AT---TGTAATGAGA---C-CTTTACATGTAGACATGTAG---TAGCATCAATGAGATCTTCCGCCCTACTAGTACT-AC
TAGCATTTTGTATAAGCTAAAACATAT-----------------------AAAAAACGGATTA---TATACAGCTAAAGA
ATCTTCTCCAAAGGAATTAATTAAT-------------------------------------------------------
--------------------TACTAGAAAGGTCGTCTTTTGTGCTCCAATCCAATCATGCATGTCCGTCTAGAGGATATC
CTTGTTGATTCTTGTGGCCAGCTCGTGAGCAGCCTCTCACCAAAAGCTTGTTGTGACTCTTTAAGTAATATATTTAGGTG
GGGAACAAAAAATGACTGCTCTCCCGGTATGATTGATTCTTATCAAACAGGGGCCAATTAAGCCGCCAACTCTTACAATG
ACAGCAAATGGGACCTTACCGAAGCCGTAGTCCGTAGATTTACTCTTTAGATAACTCCCCGGAC----------------
---------------------------------------------------------------GATCGATAAGGCCCAAT
CACCTCTTCCTTTTGCCACCGATCAAG-----------------------------------------------------
---------TTAGCACGATAATGATGTTTAATC----AGTGTGATAGCTCAGCAGCCCAACTTGTTTAGGTTGGTGCTTG
GGGTGAGGCCAAGCTGGCCGGTTTGTTTGAAGCCTTTTCATATAGCTCATCGCTCACTCATGCCGAATGG-----TGCTG
GCCGGTTTGTTTGAAGGCTTTTGAATATGAGCAAGGGGGTTGTGCTTG-TCCACATGTTAATGATTTGATTTACCCCTGC
ATG-------CATGCTGATCTCAGCTTGGGTGATCATGTATGATTTAAAATATAATACTAGTACAGTAATAAGATA---T
TATGCTCATTAGAGTAAGCT
>chr5A_4
---TGAAAAATTCTAAAACAAAGAAGAATTGCATGCATTTTG-ATGTTTCTGTGTATGATGCATTGTAAATCGTGAAGTA
AAA---AAGAGTGTCATTTCATTCAGAAGAGAAATATATGAATAGTTAAAGCATGAAAGGTTTTAGAACAAACGAGAAAC
CCTTGTGTTTTGGGGTTTGTTTATTGTGATTAAGCTCAACCATGAAATATTTTCAATAGTACATGTGGCAGAATTTGTTG
TTGTGCAGATGATATCCAACGGTCAATAGTGTCCG-AATTTGCTATATTTGCACCGGCAGATTGGCTTCATCCAAAGACA
TATTTTAAAAATTACA---CATATGCTACAGAGCG---------------------------------------------
----------------------------------ATCATAATCATTGAAGAGCGTTTTGATGGCAACTTTAGTTATCGCG
TGGATGTCAGTACGAT---AAATTTTGATGAAAAACAGAAGTGCAGTGGAGTTGCCGTGCTCGAC------------CGA
CCAACATAAATTGTCATCAAAATCACTCTCAAATATCATGCTCCCAACAATACGGCCGCCGGAACGGA------------
--------------------------------------------------------------------------------
-------TACCTA--------GGAACGGAACGGATACGCCGCCGCCGCC---TGGGTACTAACAA----TACGGCCGCCG
CAGCAGAGCACCCGGCCGGCCCACATGTCAGCGGCC-ATGTGGTCGTACTCCATCCCCGCGTCCACCTCTATAA-GTTGA
GCACCGCATCTGCTGCCTCCCCTGAGCTCCCAGCGTCCTGAGAGGAGAGCCACAGACTCGAGCGCCCCCCCATCCTCATC
CTGCTCCCTAACCAAGAAGCGAGACGACGGTGACCAGTCCCCAGAG------------CGCACTCCCACACCA-------
--------------------------------------------------------------------------------
-----------------TGGATCTCCAGACCTTCGTGCTGAGGGTGACCATCCACTGCCATGGCTGCAAGAAGAAGGTCC
GGAAGGTGCTCAAGAGCGTCGAAGGTACCAGCGTCGCCCTCCTTAATTCTCCTCCCGCCGCTGCATTTTCGGCTTAATTA
G---------------CTTACTAAGTGGTCGTCGCGCGTTTTGGTTGGGGTGC------TCAGGCGTGCAGGACGTGAAG
GTGGATGCCCAGCTGCACAAGGTGATGGTGACCGGCACCGTGGACGCCGAGACGCTCATCAAGCGGCTGCACAAGTCGGG
CAAGCAGGCCCTGCCATGGCAACACAC---------GCCTGCCAAGAATCCCGACCCTGCGCCGCCAGCCCCAGCC---G
ACGCCCCCGCGCCGGCCG---------GGGACGGCAGCAAGGATGCTGCTGTGGCCGACAAGAAGCC-------------
--------GGCGGAGCCTGTGAAGGAGCCGCAGGCCGACAGCTCGGACAAGAAGCCGGAGCAGGAGACGGCCCCCG---A
GAAG---------------------------AAGCCTGAGGCGGAGAAGGAAGCAGAATCTGAGAAGAAGGCTGACA---
AAGAGGAGGAGGCAAAAC------CAAGCGACGAGGCAAAGCAAGACGGCGGCGAGGGCG---------AG------CCC
AAGGCAAAGGGCGCCGAGCCCGCGAGTGAGCCC---------GCTGCCGCCGCAAAGGAGGCCGGCGGCAATGACGAGGC
CGAGGCGAAGAAGAAACAGAGCAAGCCCAAGGACGC---------------CGATAGGTCCCTGT---------------
---CCC------------------ATGCGCCGAT------------GCACGCGCACCACGAATTCAACCCGTACGGCGCG
CCGCAGCCGGTGATGAGCTACAACATGGCGCAGCCGAGAGCGAGCGTGTCCCACTACGCGCCGCGGCCGGAGCAGGGCTA
CTCGCTGCAGCAGCAGCAGGCCGGGTACTCCTCCTCCTCCA---------TGATGCAGCACCCACCGGCGCCGGCGCAGC
AGGCCTACTCCCAGCAGGCG---CAGCCAATGCAGCAATGGTCGCCGTCCTACCTCTACATGCCGTACCCGCACGCGTCG
CCGGAGTCCTACTACCAGGACTACTACAGCCCGCCCGGGACGCACGCGGCGCCGCCACCC---CTGCCGCCGCTCCAGGA
CTCGTACCGCCTGTTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGATC-GATGGCGGCTC--------------
------------CGGCCACCGCCGGAAAAGTAGCCA---GAGGCGGCCTCATAATCGTATCGTAAT----AGAG----AC
CTCTCTGGTTGTAGGTAGAGACAGTAGCTTGTTACTCTCTTCGATT-----GGGAGGT---CAAAGCTCTCCTTGACCAA
TCCTTTTTCTTTTTCTTCTTCTTCCTCTTTAATTTCTTCTTCTATTATTGCTACTATTACTGTTCTAAATAGAGCATGTA
AT---TGTAATGAGAGAAC-CTTTACATGTA-----GTAG---TAGCATCAATGAGATCTTCCACCCTACTAGTACC-AC
TAGCATTTTGTATAATCTAAAAAGACATGAGAGAGAGAAACATAAAAGATAACACGGATTATATATTATACATCTAAAGA
ATCTTCTCTAGAGGAATTAATTACTCAGTCCCGTAATATGCGTTTTTGACACTATTGTAGTGTCAAAAACGCTCTTATAT
CACTGGACGGACGGAGGGAGTAGTAGAAAGGTCGTGGTCTGTGCTCCAATCCAATCATGCAT----GTCTAGAGGATATC
CTTGCCGATTCTTGTGGCCAGCTCCCGAGCAGCCTCT-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GAC----------------
---------------------------------------------------------------GATCGATGAGGCCCAAT
CACCT--TCCCTTTGCCACCGATCAAGT----------------------------------------------------
---------TTAGCACGATAATGATGTTTAATTAATTAGTGTGATGGCTCAGCAGCCCAACTTGTTTAGGTTGGTGCTCG
GGGTGAGGCCAAGCTGGCCGGTTTGTCTGAAGCCTTTTCATATAGCTCATCGGTCGCTCATGCCGAATGGTGTGGTGCTG
GCCGGTTTGTTTGAAGGCTCTTGAATATAAGCAAGAGGGCTGTGCTTG-CCCACATGTTAATGATTT-------------
--GATTTACCCATGCTGATCTCAGCCTGGGTGATCATGCATGATTTATA-TATAATGCTGGTACAGTAATAAGATACTGT
TATGCTCATTAGAGTCAGCT
>chr5B_6
-----AAAAATTCTAAAACAAAGAAGAAT-GCATGCATTTTG-ATGTTTCTCAGTATTATGCACTGCAAATCGTGAAGTA
AAAAAAAAGAGTGGCATTTCATTCAGAAGAGAAATATATGGATCGT--AAGCATGAAAGATTTTAGAACAAACGAGAAAT
GCTTGTGTTTTGGGGTTTGTTCATTGTGATTAAGCTCAACCATGAGATATTTTATATACTACATGTGGCAGAATTTGTTG
TTGTGCAGTTGATATCCAACGGTCAATAGTGTTTCAAATCTGCTATATTTGCATTGGCAGATTGGCTTCATCGAAAGACC
AATATTAAAAATTATAGTACATAGGCTACATGGTGATGTAAAATTATTCGTATTATTTCTG--AAAAAGTCTGAATTGGA
TAGTAACATATATCTTACCGTCTTTAAAAAGGTAATCATAATCAGTGAACAGCGGTTTGATGACAACTTTAGTTACCGCG
TGGATGCCAGTACTATGATAAATTTTGATGAAAAACAGAGCTGCAGTGGAGTTGCCGTGCTTGCTGATTGCCATGCTCGA
CCAACATAAATTGTCATCAAAATCACTCTCAAATATCAACCTC-------------------------------------
---------------------------------------------------------GGTACTGTAGAATTCTTTGACGG
CGCCTGGTAGTACCACGGAACGGAACGGAACGGATACGCCGCCGCCGCCGCCTGTGTACTAACAAACATTACGGCCGCAG
CAGCAGAGCACCCGCCCGGCCCACATGTCAGTGGCCTCTGTGGTCGTACTCCATCCCCGCATCCCCCTCTATAAAGTTGA
GCACCGCATCTGCTGCCTCCCCTGAGTTCCCAGCGCCCT-----CAGAGCCACAGACTCGAGCGCGCCCCCATCCTGCTC
C------CCAACCAAGAAGCGAGACGACGGTGACCAGTCCCCAGAGGC-----CAGAGCGCACTCCCATCCCA-------
--------------------------------------------------------------------------------
-----------------TGGATCTGCAGACCTTCGTGCTGAGGGTGACCATCCACTGCCATGGCTGCAAGAAGAAGGTCC
GGAAGGTGCTCAAGAGCGTCGAAGGTACTAGCGTCACCCTCCTCC-TTCTCCTCGCGCCGCTGCATTTTCGGCTTAATTA
---------T----AACTAGCTAAGTGGTCGTCGCGCGTTTTGGTTGGGATGT------TCAGGCGTGCAGGACGTGAAG
GTGGATGCCCAGCTGCACAAGGTGATGGTGACCGGCACCGTGGACGCCGAGACGCTCATCAAGAGGCTCAACAAGTCTGG
CAAGCAGGCCCTGCCATGGCAACACAC---------GCCTGCCAAGAATCCCGACCCTGCGCC---------AGCC---G
ACGCCCCCGCGCCGGCCG---------AGGACGGCAGCAAGGATGCTGCTGTGGCCGACAAGAAGCC-------------
--------GGCGGAG---------GAGCCGCAGGCCGACAGCTCAGACAAGAAGCCGGAGCAGGAGACGGCCTCGGAGAA
GAAGCCGGAGCAGGAGACGGCCTCGGAGAAGAAGCCTGAGACGGAGAAGGAAGCAGAGTCTGAGAAGAAGGCTGACA---
AGGAGGAGGCG---AAAC------CAAGCGACGAGGCAAAGAAAGACGGCGGCGAGGGCGCGGCGGCCGAGCCCAAACCC
AAAGCAAAGGGCACCGAGCCCGCC------------GCCGCTGC---------AAAGGAGGCCGGC---GATGACGAGGG
CGAGGCGAAGAAGAAACAGAGCAAGCCCAAGGACGC---------------GGATAGGTCCCTGGCCCCAGCGCCGGCGC
CGGCCC------------------ATGCGCCGAG------------GTACGCGCACCAGGAATTCAACGCG---------
CCGCAGCCGGTGATGAGCTACAACATGGCGCAGCCGAGAGCGAGCGTGTCCCACTACGCGCCGCAGCCGGAGCAGGGCTA
CTC---GCAGCAGCAGCAGGCCGGGTACTCCTCCTCCTCCTCCATGATGGTGACGCAGCACCCACCGCCACCGGCGCAGC
AGGCCTACTCCCAGCAGGCG---CAGCCAATGCAGCAATGGTCGCCGTCCTACCTCTACATGCCGTACCCGCACGCGTCG
CCGGAGTCCTACTACCAGGACTACTACAGCCCGCCCGGGACGCACGCGTCGCCGCCGCCC---CCGCCGCCGCTCCAGGA
CTCGTACCGCCTATTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGATCTGATCACGGCTC--------------
------------CGGCCACCGGCGGAAAAGTAGAGGCG---GCCGTCCTCATAATCGTAATAGAGACG-----G----AC
CTCTCTGGTTGTAGGTAGAG----TAGCTTGTTACTCTCTTCGATT-----GGGAGGT---CAAAGCTCTCCTTGACCAA
TCCTTTTTCTTCTCA--CTTCTTCCTCTTTAATTTCTTCTTTTGTTATTGCTACTATTACTGTTCTAAATAGAGCATGTA
AT---TGTAAT-----------TTACATGTAGAA---TAG---TAGCATCAATGAGATCTTCCACCCTACTAGCACTTAC
TAGCATTTTGTATAAGCTAAAAA-ACATGAGAGAGAGAAACATGAAAGAGAAAAACCGGATTA---TATACAGCTAAAGA
ATCTTCTCTAGATGAATTAATTAAT-------------------------------------------------------
--------------------TAGTAGAAAGGTCGTCCTTTGTGCTCCAATCCAATCATGCAT----GTCTAGAGTATATC
CTTGTTGATTCTTGTGGCCAGCTCGTGAGCAGCCTCT-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GACCAACCGCTTAAAAACG
CGAGTCATCAACGAAAGACTTTGACAGAAGGTAAAAATAAATAAATGACTGCTCTCCCGGTGTGATTGATAAGGCCCCGT
CACCTC-TCCTTTTGCCACCGATCAAGTTAGCACGATAATACCACGTGACACTCGTGGTAAGCAATCCAAACTTGATGAA
AAAAAGAAGTTAGCACGATAATGATGTTTAATC----AGTGCGATAGCTCAGCAGCCCAACTTGTTTAGGCTGGTGCCTG
GGGTGAGGCCAAGCTGGCCGGTTTGTCTGAATGCTTTTCATATAGCTCATCGCTCAT-----------------------
GCCGGTTTGTTTGAAGGCTTTTGAATATAAGCAAGGGGGTGGTGCTTGTCCCTCGTGTTAATGATTT-------------
--G-------CATGCTGATCTCAGCTTGGGTGATCATGTACGATTTAAA-TATAATACTAGTGCAGTAATAAGACA---T
TATGCTCATTAGAGTAAGCT
>chr7B_1107
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------------------GGATCTGCAGACCATCGTGCTGAGAGTGACCATTCACTGCCATGGCTGCAAGAAGAAGGTCC
GGAAGGTGCTCAAGAACATCCAAGG---TACCGTCACTCTCTTCT-TTGATCGTCGCG---TGCGTTTCCGTTTGCTTTT
GGGCTTATAATTGACCAAAGTGTC-----CGT----CGTTTTGGTTGGGATGT------TCAGGCGTGCAGGACGTCAAG
GTAGATGCGCAGCAGCACAAGGTGACCGTGACGGGCACCGTGGACGCCGAGACGCTCGTCAAGAGGCTGTACAAGTCAGG
CAAGCATGCCCTGCCATGGCAACACACACCCGCCGCGCCTGCCAACAGCCCCGAGGCTGCGCC---------CGCAACTG
AGGCCCCGGCGCCGGCCCCTCCGGCCAAGGACGGCAGCAAGGATCCTGCTGCGGCGGACAAGAAGCCAGCGGAACCTGTG
AAGGAGCTG---------------------CATGCCGACAGCTCGGATAAGAAGCTGGAGCAGGAGGAGACGTC--CC--
-----------------------CGGAGAAGAAGCCTGAGACGGAGAAGGAAGCAGAGTGTGAGAAGAAGGCTGAGA---
AAGACGCGGCG---AAAC------CAAGCGATGAGGCAAACAAAGACGGCGGCGATGGCGCGGCGACCGAG------CCC
AAGGCAAAGGGCACCGAGCCCGAGAGTGAATCCGCTGCCGCCAC---------AAAGGAGGCCGGC---GATGACGAGGC
CGAAGACAAGAAGAAACAGAGCAAGCCCAAGGACGCAC------CTGCGCCGGACAGGTCCCTATCTCCGTCGCCGGCGC
AGGCGC------------------ACGCGCAGCAGGAGTTCAACCCGTAC---------------AGC---------GCG
CCACAGCCTGTGATGA-------------GCAGCTGAGAGCGAGCGTGTCCTACTACGCGCCGCAGCCAGAGCAGAG---
---------------------------CTACTCCATGTCCA---------TGCAGCAGCAACCGCCGCACC---CGCAGC
AGGCCTACTCCCAGCAGGCGGCGCAGCCAATGCAGCAGTGGTCGCCGTCGTACCTTTACATGCCGTACCCGCACGCGTCG
CCGGAGTCCTACTACCAGGACTACTATAGCCCGCCCGGGACGCACGCGCCGCCGCCTCCGCATCCGCCGCCGCTGCAGGA
CTCGTACCGCCTGTTCGACGACGAGAACCCAAACTCGTGCCGCGTCATGTGATTTCACCAGACACGTTCGGCATGGGTGC
CGCTCCAGCTAGCCGCCGACGGCAGCAAAGTAGCTGAG---GATCGGAGGCGGCTGCGTAACAGAGAGTCAGAG----AC
CTCTCTGGTTGTAGGTAGAG----TAGCGTGTTACTCTCTTCGATT-----GGGAGGT----------------------
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>chr4D_1137
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------------------------------------------------CATCCACTGCCATGGCTGCAAGAAGAAGGTCC
GGAAGGTGCTCAAAAACATCCAAGGCAGGTCCTCGCCCCAATTCTG------------CGATGCATTTTCGTGTGTCTTC
CGGCTTAATT----AACTAACCAAGTGGTCGTCGCGTGTTTTGGTTGGGATGTTCAACTTCAGGCGTGCAGGACGTGAAG
GTAGATGCCCAGCTGCACAAGGTGATGGTGACGGGCAGCATGGACGCCGAGACGCTCATCAAGAGGCTCTACAAGTCAGG
CAAGCAGGCCCTGCCATGGCAACACAT---------GCCTCCCAAGAATCCCGACCCTGCGCC---------AGC-----
----------------CG---------AGGACGGCAGCAAGGATGCTGCTGTGGCCGACAAGAAGCC-------------
--------G---------------------CAGGCCGACAGCTCCGACAAGAAGCCGGAGCAGGAGAAAGCCCGGACC--
-----------------------CAGAGAATAAGACTGAGACGGAGAAGGAAGCAGAATCTGAGAAGAAGGCTAAGAATC
AGGAGGAGGCG---AAAC------CAAGCGACGAGTCAAAGAAAGACGGCGGTGAG------------------------
------------GCCGAGCCCGCGAGTGAACCC---------GC---------AAAGGAGGCCGGC---AATGACGAGGG
CGAGGAGAAGAAGAAACAGAGCAAGCCCAAGGACGGCGCAGCCGCTGCGGCGGATAGGTCCCTGTCCCC-----CAGCGC
CGGCCC------------------ATGCGCCGAG------------GTAC---------------AAC---------GCG
CCGCAACCGGTGATGAGCTACAACATGGCGCAGCCGAGAGCGAGCGTGTCCTCCTACGCGCCGCAGCTGGAGCAGGGCTA
CTC---GCAGCAGCAG---GCCGGGTACTCCTCATCCTCCTCCTCCATGATA------------------------CAGC
AGGCCTACTCCCAGCAGGCG---CAGCCAATGCAGCAATGGTCGCCAGCGTACCTCTACATGCCGTACCCGCACGCGTCG
CCCGAGTCCTACTACCAGGACTACTACAGCCCACCGGGGACGCACGCG---------------CCGCCGCCGCTCCAGGA
CTCGTACCGCCTCTTCGACGACGAGAACCCCAACTCGTGCAGCGTCATGTGATC-----GCGGCTC--------------
------------CGGCCACCGGTGGGAAAAGTAGCCAAGGAGGCAGCTTCATACTCTAATCATGAT----AGAGACGAAC
CTCTCTGGTTGTAGGTAGAG----TAGCTTGTTACTCTCTTCGATTTGATTGGGAGGT---CAAG---------GACCAA
TCCTTTTTCTTCTTCCTCT--------TTTAATTTCTTCTTTTATTATTGCTGCTATTACTGTTCTAAATAGAGCATGTA
ATACTTGTAATGAGATACGACTTTACATGTA-----GTAGCACTAGCATCAATGAGATCTTCCACCCTACTAGTACT-AC
T-------------------------------------------------------------------------------
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--------------------
>SNPs
SSS-------------------------S------------SS-------------------------------------
----S----S-------------------------------------------------------S----------S---
-------------------S-----------------------------------S------------------------
--------------S--------S------------S-----------------S--S----------------------
----------------------S--------------------------------S---S-SS-----------------
-------S-------S-S--S---S----S-----------S-----------S--------------------------
----------------------S-------------------------------------------------------SS
----------------S-----------------------------S---SSSSSSSSSS--SSSS-SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------------S---S
---------------------------------------------------------------S-SS-S-----------
----------S------------S-----------S--------------------------------------------
------------------------------------------------------S-------------S-----------
----------------------S--S-------S--------------SSSSS--------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS---------------------------------------------------------------
---------------------------------------------------------------------------S----
----------SSSS------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------------------------------S------------
----------------------------------------------S-----S---------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------S-----
-------------S----SSSSSS------------S-------------------------------------------
------S-------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
------SSSSSSSSSSSSSSSSSS---S----------------------------------------------------
--------------------------------------S----------------------------------S------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------------------------------------------------S--------------------------
----------------S---------------------------------------------------------------
----------------------------------------------------------SSS-------------------
--------------------------------------------------------------------------------
---------------------------------SSS---------------------------S----------------
----------------------SSSSS----------------------------S------------------------
--------S-S---------------------------------------------------------------------
----------------------S-------------S-------------------------SSSS--------------
-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
----------------------------S--------------------S-----------------SSSSSSSSSSSSS
SS-----------------------------------------------S------------------------------
--------------------
>forward_661
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-TAACGCTTGCGTCCGTACTT-----------------------------------------------------------
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>reverse_1774
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-------------GAAACCAAGGTCAAGCGACG-----------------------------------------------
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>forward_1070
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----------GCCATGCAGGTACACCATCT--------------------------------------------------
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>reverse_3133
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------------TGACTGCTCTCCCGGTATGA------------------------------------------------
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--------------------
