>input_sequence_56753
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------ATGTCGGTGGCCGTGTGCCGTGGCCCGGCCGTGCCGGCGTTCGAGACCCCCGCCTGGCTGCGCCCGGCTAAGCC
GCACAAGCCGGAGGTGGTGGTGGCCGACGACCGGCCCGCTCAGGTCGACATATGGAATGCCATCCAGGCCGGCGTGG---
ACAGCAAGGTG---GCCGCCGCCAAGAAGCCGTACGTCAGCCCGCGCGTGCGACGGTCGATGAGCCAGAAGAGCCTCGAG
GTCTGCACCGAGAGCCTCGGCTGCGAAACCGGCTCCGGCGACTTC---------------------GACATGTCCTGCCT
CTT---TGGCTCGCCGCTGCCGACGGCGCCCGTCGAGGCAGAGGAGTCCTTCTGGGA---GAGCAGTGCCGCACAAGAAA
GCTACCCGGCCGA------CGACCTCGTGGCGGTGAACTACCACTCCTCGGGCGGGAGACGGTCGCCGCGCCGCTCGTTC
CCGCCGCCGCTGCCATCCATGTCGAGCCGCGATGGGCCGTGTCTGAAGATGTGCTCGCGCCGCCAGGACGGCCGCCTCGT
CGTCGAGGCGGTGGTGGTGAGGCCGCGCGGGTACCTCCAGGCGAACCGCCAGGGCGGCCGCCTCTGCCTCTCCTTCATCG
AGTGCTCTGCTCGTGGCCAGAGCGCGGCGAGCAAGAGCGCCGCGCCGGCCGAGGCGTCCTACT---TCCCGGTCGTGGAG
GACAAGTGCGAGCCAGAGCAAGAGGTGGCCATGCAGGTGGAGGAGGAG------GAGGAAGACGAGGAGGAGGTGGAGGT
CGTGGACAGAGGCACCATGGTGGAGGTGAAGGTCAGCTCGCAGCCGCAGGCGCCCGCCGCCGCCAAGGTGCACCGGTCGA
CGCTCGTCATCAACAAGTTCGTGGGCAGCACGCCCTTCACCTTC------GAGCAGGCCCGGGGCCACGCCG---ACGCG
CCGCACTCCGAGCCGTCCGCCCGCGAGGAAACCCCGAC---GCTGCGCCGGGTGCCCTCGTCCACGACGACGCTCGCGGC
CGCGGTCGCGGTGGCGTCGACTGAGACCGGCGCGCCGCACACTCCCGTCGACGGCGATGACAGTGAC------GAGGACG
AGGACGAGTGCGGCGGACGGCACCACCCGTCGT------CGGCCCTGGCCGCCGCCGACACGAAGCAGCAGCTGCT---C
CTGTTCACGTCGCGGCGGGGCGACAAGCACGACCTGCTGCAGAGCGTGCGCCGGTGCCGGCAGCTGCGGCAGAAGCCGCT
CTTCATCCTGGAGCAGTACTGCATTGCCACCTCCTAA-------------------------------------------
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----------------------------------------------------------------------
>chr4D_1_TraesCS4D01G039900
ACAACCATGCGTGTAGTCGCAGGTCAATTTTTTTTTGAACAGTCATATGTGAATCCAATGGCCAAATTGCTTTCTTCATC
ATTTTCTCCCAATCCGTCAGTGACCACCGGCCAAATCCTATCTCCAACGCCCACGGTTGGCGATGCTCCCGGGACCGTCT
TACCGCCCCGTCCTCCCCTCGACCTCCCCCACCGTCGTGCTTGCCGCCATCCCCGGCCATCCCTCTAGACCGTCGACCAC
CAGATTGATTCCCGGCGCACCCCTCCCCCCACCCGAACCATCAACTTTTCGACTCGCCTCGCCGGCTATACCGCTAGGTG
TGGCTTGTTCCTAGCTGAGGTCTTGCCGGTGTCCCCAAACCTCGCTTCGCTCGCCCCGACGACGCCGTCATTGATGTCGG
TGCTCCGCGTGGTTGCTGCTTCCTTCCCGTAGAATCGGCTGATCCTCTTTCAAATTTAGGCGACCGACGTGCAGCTAAAC
TGCAATATGAAGTGCCAAGGTGAATTTTAGCAAAAGAAAATGCCAAAGTGTAACTTGCGAAAAAGGCGAAGGAAAACAGA
G---TATGGTGGCGGAGGCAAGTAGTGGGGG--AGCATGGGG-CCCTCTCCTTTGGCCTTGGACGGCCAATGCCACCCAT
TCT-CTCTCCTTTCCCCCGCCTACAAATAGCCCTCGGAGCTCAGCAAACCAAATCATACATGCCAGCAACAGAGCAGCTT
CTTTCTTCTGTTAAC----------------------------AACAAGAAGATCAGCCAGTGATCGCCTCCCAAAACAA
CACCTCCCAACCCTCAGAAAACAAGTTTTTCCAGGCCTTCT---GGTGTCTATTGACGTTCCTTGAGGTA---AGAAAGC
TGCCACAACGCCTGCTCTTCTGGCTCTTGCATGTTTTTTTAAGCCGAG--AA---ATGCACCGCAAGCCGTTCATCTCTT
GCTCACCTCTTTTCTGAACTTGCTTCTCCCCAGGGAGCAGCCTTTCGCTACTGCCGCCACTTCACATCTTCCCACCCAAG
GCGAAGATGTCGGTGGCCGTGTGCCGTGGCCCGGCCGTGCCGGCGTTCGAGACCCCCGCCTGGCTGCGCCCGGCTAAGCC
GCACAAGCCGGAGGTGGTGGTGGCCGACGACCGGCCCGCTCAGGTCGACATATGGAATGCCATCCAGGCCGGCGTGG---
ACAGCAAGGTG---GCCGCCGCCAAGAAGCCGTACGTCAGCCCGCGCGTGCGACGGTCGATGAGCCAGAAGAGCCTCGAG
GTCTGCACCGAGAGCCTCGGCTGCGAAACCGGCTCCGGCGACTTC---------------------GACATGTCCTGCCT
CTT---TGGCTCGCCGCTGCCGACGGCGCCCGTCGAGGCAGAGGAGTCCTTCTGGGA---GAGCAGTGCCGCACAAGAAA
GCTACCCGGCCGA------CGACCTCGTGGCGGTGAACTACCACTCCTCGGGCGGGAGACGGTCGCCGCGCCGCTCGTTC
CCGCCGCCGCTGCCATCCATGTCGAGCCGCGATGGGCCGTGTCTGAAGATGTGCTCGCGCCGCCAGGACGGCCGCCTCGT
CGTCGAGGCGGTGGTGGTGAGGCCGCGCGGGTACCTCCAGGCGAACCGCCAGGGCGGCCGCCTCTGCCTCTCCTTCATCG
AGTGCTCTGCTCGTGGCCAGAGCGCGGCGAGCAAGAGCGCCGCGCCGGCCGAGGCGTCCTACT---TCCCGGTCGTGGAG
GACAAGTGCGAGCCAGAGCAAGAGGTGGCCATGCAGGTGGAGGAGGAG------GAGGAAGACGAGGAGGAGGTGGAGGT
CGTGGACAGAGGCACCATGGTGGAGGTGAAGGTCAGCTCGCAGCCGCAGGCGCCCGCCGCCGCCAAGGTGCACCGGTCGA
CGCTCGTCATCAACAAGTTCGTGGGCAGCACGCCCTTCACCTTC------GAGCAGGCCCGGGGCCACGCCG---ACGCG
CCGCACTCCGAGCCGTCCGCCCGCGAGGAAACCCCGAC---GCTGCGCCGGGTGCCCTCGTCCACGACGACGCTCGCGGC
CGCGGTCGCGGTGGCGTCGACTGAGACCGGCGCGCCGCACACTCCCGTCGACGGCGATGACAGTGAC------GAGGACG
AGGACGAGTGCGGCGGACGGCACCACCCGTCGT------CGGCCCTGGCCGCCGCCGACACGAAGCAGCAGCTGCT---C
CTGTTCACGTCGCGGCGGGGCGACAAGCACGACCTGCTGCAGAGCGTGCGCCGGTGCCGGCAGCTGCGGCAGAAGCCGCT
CTTCATCCTGGAGCAGTACTGCATTGCCACCTCCTAATCGCTCGCACGTGCGCTCGCCCGAAGAAAGCAAAACCACGAGA
CAAACACATGTCCAATCAATCACCCAGCATTTGCACTGCTGCTAATGCGATAGTTCGGTTGCCAGGCTTAAACT------
-----------------------ATTCCCGTCCCAGATCCCAGATAGTTAGCCTAGCCAGTGGGATAATAACCTCAA---
TTAATCCGTGGCCACAGTGGCTGCTGGCTGCATGCATGCCGGGCTTTTTTGTGACACATGCCGCCCATGTGTCGCTCTTT
TTTCCCCGATCG----ATCGATCGGTCGGGTCGCCGTTTGGTCCCGGTGCATGCAGCGGCTAGCTCTGGTTCCGGCCGGC
GTGACCGTAGC-----ACTGCACTCGTGATGTATTTCCAGTGTGATTTGAGTAATTATTCAATGAAATTAACAGATTGTT
GGCTGTATAACAGATCGTAGTATCGGCT-----TGCCATTTTCATACATACGC-----ATCATGTGCAATGATGAGGTCG
TGCCGCCTACTTCCGTTTCCGTTTTATCCG---TGAGAAGATCGTGACGGCGTACGTGCGT----GCCGAATAATCGACG
TGCTTTGAGACAAAACGAGACATAGGGGATGCGCGAAATAGTATAGTTTGGCCTGCCACTTCGGGTAGCCCTACAGCGAT
CGATCGATCGATCAC---GCGGAACGGTTAGATGCGCGTGACGTTGATTTTGCCGCCT----CATGCATTCCTCGATGTG
TGCCCATTTTCCAGAAAAAATTCAGATCTATTATTATAAAAGTTCGCCAAAAGTACGAAACATCATAATAAAAGCATAAT
AAAAATTACATTGATGTCTCGTTCCTAGACCGTCGAATGACCAGTACCGCCATTAGAACGAGCTTGTGCACAAGTCGATA
AGTCGCTACACCGAA-GAGTGTCTAGTTGCTGCCCACGTTCATGCTATCG-------AGAATGCAAGTCTGATTTACCAA
TGGGAAATAAATCTAGTACTAACTAAGGGCATCTCTAGCCGATTCCTTAAAAGTTAAGGGAGTAAAACCT
>chr4B_410
TGGC----------------------------------------------------------------------------
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-------------TGTTGCTTCCTTCCCATAGAATCGACGGATCCTCTTTCAAATTCAGGCGACTGACGTGCACCTAAAC
TGCAATAAGAAATAACAAAATGAATTTTAGCAAAAGAGAATGCCAAAGTGTAACTTGCGAAAAAGGTGAAGGAAAACAAA
G---CATGGTGGCGGAGGCAAGTAGTGCGGG--AGCATGGCCCCCCTCTCCTTTGGCCTTGGACGGCCAATGCCACCCAT
TCTCCTCCCCTTTCCCCCGCCTACAAATAGCCCTCGGAGCTCAGCAAACCAAATCATACATGCCAGCAACAGAGCAGCTT
CTGTCTTGTGTCAAA----------------------------AACAAGAAGACCAGCCAGTGATCGCCTCCCGAAACAA
CACCTCCCAACTCTCAGAAAACAAGTTTTTTCTACGCCTTC-------TCTATTGACGTTCCTTGAGGTA---AGAAAGC
TGCCACAGCGCCTGCTCTTCTGGCCCTTGCATGTTTTTTTTAAGTCGAGAAATGCATGCACCGCAAGCCGTTCATCTCTT
GCTCACCTCTTTTCTGATCTTGCTTCTCCACAGGGAGCAGCCTTTCGCTACCGCCGCCACTTCACGTCTTCCCACGCAAG
GCCAAGATGTCGGTGGCCGTGTGCCGTGGCCCGGCCGTGCCGGCGTTCGAGACCCCCGCCTGGCTGCGCCCGGCTGAGCC
GTACAAGCCGGCCGCGGCGGTGGCCGACGACCGGCCTGCGCAGGTCGACATATGGAATGCCATCCAGGCCGACGTGGTCG
AGAGCAAGGTGGCCGCCGCCGCCAAGAAGCCGTACGTCAGCCCGCGCGTGCGCCGCTCGATGAGCCAGAAGAGCCTCGAG
ATCTGCACCGAGAGCCTCGGCTGCGAGACCGGCTCCGGCGACTTCACCGCGTCTCTCGACGCCGTCGACATGGACTGCTT
CTTTGGTGGCTCGCCGATGCCGACGGCGCCCGTCGAGGCAGAGGAGTCCTTCTGGGA---GAGCAGTGCCGCGCGAGAAA
GCTGCTACCCGGGAGACGGG---CTCGTGGCGGTGAACTACCACTCCTCGGGCGGGAGACGGTCGCCGCGCCGCTCGTTC
CCGCCGCCGCTGCCGTCCATGTCGAGCCGCGACGGGCCGTGTTTGAAGATGTGCTCGCGCCGCCAGGACGGCCGCCTCGT
CGTCGAGGCGGTGGTGGTGAGGCCGCGCGGGTACCTCCAGGCGAACCGCCAGGGCGGCCGCCTCCGCCTCTCCTTCATCG
AGTGCTCTGCTCGTGGCCAGAGCGCGGCGGGCAAGAGCGCCGCGCCGGCCGAGGCGTCCTTCT---TCCCGGTGGTGGAG
GACAAGTGCGAGCCAGAGCAAGAGGTGGCCATGCAGGTGGAGGAGGAGGCC---GAGGAAGACGAGGAGGAGGTGGAGGT
GGTGGACAGAGGAACCATGGTGGAGGTGAAGGTCAGCTCGCAGCCGCAGGCGCCCGCCGCCGCCAAGGTGCACCGGTCGA
CGCTCGTGATCAACAAGTTCGTCGGCAGCACGCCCTTCACCTTCACCTCCGAGGAAGCGCGGTGCCACGCCG---ACGCG
CCGCACCCCGAGCCGTCCGCGCGCGACGAAACCCCAGC---GCTGCGCCGGGTGCCCTCCTCCACGACGACGCTCGCGGC
CGCGGTCGCGGTGGCGTCGACCGAGACCGGCGCGCCGCGCACCCCCGTCGACGGCGACGACAGCGACGACGAGGAGGAGG
ACGACGAGTGCGGCGGACAGCACCACCCGTCGTCGGCCTCGGCCCTGGCCGCCGCCGACAGGAAGCCGCAGCAGCTCCTC
CTGTTCACGTCGCGGAGGGGCGACAAGCACGACCTGCTGCAGAGCGTGCGCCGGTGCCGGCAGCTGCGGCAGAAGCCGCT
CTTCATCCTGGAGCAGTACTGCATTGCCACCTCCTAATCAATCGCACGTGCGCTCGCCCGACGAAACATGTCCAGCATTT
GCATTT--------------------GCACTTGCACTGCTGCTAATGCGATAGTTGGGTTGCTGGGCTTAAACT------
-----------------------A------------ATCCCAGATAGTTAGCCTAGCCAATGGGATGGATAATAACAACC
TTAATCCGTGGCCACAGTGGCTGCTGGCTGCATGCATGCCGGGCTTTTTTGTGACACATGCCGCCCATGTGTCGCTCATT
TTCCCCCGATCGATCGATCGATCGGTCGGGTCGCCGTTTGGTCCCGGTGCATGCAG----------TGCCTCCGGCCGGC
GTGACCGTACTACTTCACTGCACTCGTGATGTATTTCCAGTGTGATTTGAGTAATTATTCAATG-AATTAACAGATTGTT
GGCTGTATAACGGATTCTACCATCGGCT-----TGCCATTTTCATACATACGCTGCGCATCATGTGCAATGATGGGGTCG
TGCCGCCGGCTTCCGTTTCCGTTTTATCCG---TGAGAAGATCGTGACGGCGT----GCGTGCGTGCCGAATAATCGACG
--CTTTCAGGCAGAGCGAGACATAGGGGATGCGCGAACTAGTATAGTTCGGCCTGCCACTTCGGGCAGCCCTACAGCGAT
CGATCG-----------TGCGGCACGGATAGATGCACATGACGTTGATTTTGCCGCCTACCTCATGCATTACTCGATGCG
TGCACATTTCCCCCCAAAATG-CAGACCTATTATTGTAAAAGTTCACCAATAATACGAAACATCGTAAGCTGGA-ATAAT
AAAAATTACATCGATGTCTCGTCTCTAGACCGCCGATCGACTAGTACCGCCGTCAGAACGAGCTTGCGCACAGGTCGGCA
AGTCGCTACACCAATCGAGTGTCTAGTTGCTGCCGACTGCCGACGTTCATGCCAACAAGAATGCAAGTCTAATTTACCCT
TGGAAAATAAATCTATTA----------------------------------------------------
>chr4A_410
TGGC----------------------------------------------------------------------------
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-------------TGTTGCTTCCTTCCCATAGAATGGACTGATCCTCTTTCAAATTTAGGCGACTAACATGCAGCTAAAC
TGCAATATGAAATGCCAAGCAGAATTTTAGCAGAAGAAAATGCCAAAGTGTAATGCTCTGTTTTCCTTCGCCTTTTTCGC
AAGTTATGGTGGCGGAGGCAAGTAGTGCGGGGGAGCATGGGCCCCCTCTCCTTCGGCCTTGGACGGCCAATGGCACCCAT
TCTCCTCTCCTTTCCCCCGCCTACAAATAGCCCTCGGAGCTCAGCAAACCAAATCATACATGCCAGCAACAGAGCAGCTT
CTTTCCTGTGTCAAAAACAAGAAGATCCCAGTTCAAAAAAAAAAACAAGAAGATCAGCCAGTGATCGCCTCCCAAAACAA
CTCTCAAAAACC---------CAAGTTTTTCCAGGCCTTCTCGTGGTGTCTATCGACGTTCCTTGAGGTAAGAAGAAAGC
TGCCACAACGCCTGCTCTTCTGGCCCTTGCATGTTTT--TTAAGTCGAGAAA---ATGCACTGCGAGCCGTTCATCTCTT
GCTCACCTCTCTTGTGATCTTGCTTCTCCACAGGGAGCAGCCTTTCGCTACTGCCGCCACTCCACATCTTCCCACGCAAG
GCGAAGATGTCGGTGGCCGTGTGCCGTGGCCCGGCCGTGCCGGCGTTCGAGACCCCCGCCTGGCTGCGCCCGGCTGAGCT
GTACAAGCCGGAGGCGGCGGTGGCCGACGACCGGCCTGCACAGGTCGACGTATGGAATGCCATCCAGGCCGACGTGGTCG
ACAGCAAGGCG---GCCGCCGCCAAGAAGCCGTACGTCAGCCCGCGCGTGCGCCGGTCCATGAGCCAGAAGAGCCTCGAG
GTCTGCACCGAGAGCCTCGGCTGCGAGACCGGCTCCAGCGACTTCACCG---------ACGCCGTCGACATGGCCTGCCT
CTTTGGTGCCTCGCCGCTGCCGACGGCGCCCGGCGAGGCAGAGGAGTCCTTCTGGGAGGAGAGCAGTGCCGCACAAGAAA
GCTGCTACCCGGGCGAGGTCGACCTCGTGGCGGTGAACTACCACTCCTCGGCCGGGAGACGGTCGCCGCGCCGCTCGTTC
CCGCCGCCGCTGCCGTCCATGTCCAGCCGCGACGGGCCGTGCCTGAAGATGTGCTCGCGCCGCCAGGACGGCCGCCTCGT
CGTCGAGGCGGTGGTGGTGAGGCCGCGCGGGTACCTCCAGGCGAACCGCCAGGGCGGCCGCCTCTGCCTCTCCTTCATCG
AGTGCTCTGCCCGTGGGCAGAGCGGTACGAGCAAGAGCGCGGCCCCGGCCGAGGCGTCCTACTTCGTCCCGGTCGTGGAG
GGCAAGTGCGAGCCAGAGCAGGGGGTGGCCATGCAGGTGGAGGAGGAGGAGGAGGAGGAAGACGAGGAGGAGGTGGAGGT
GGTGGACAGAGGCACCATGGTGGAGGTGAAGGTCAGCTCGCAGCCGCAGGCGCCCGCGGCCGCCAAGGTGCACCGGTCGA
CGCTCGTGATCAACAAGTTCGTCGGGAGCACGCCCTTCACCTTG------GAGCAAGCGCGGTGCCACGCCGCCGACGCG
CCGCACCCCGAGCCGTCCGCCCGCGAGGAAACCCCAACGCTGCTGCGCCGGGTGCCCTCGTCCACGACGACGCTCGCGGC
CGCGGTCGCGGTGGCGTCGACCGAGACGGGCGCGCCGCACGCTCCCGTCGACGGCGACGACAGTGACGAGGAGGACGAGG
ACGATGAGTGCGGCGGACGGCACCACCGC------GCGTCGGCCCTGGCCGCCGCGGACACGAAGC---AGCAGCTCCTG
CTGTTCACGTCGCGGCGGGGCGACAAGCACGACCTGCTGCAGAGCGTGCGGCGGTGCCGGCAGCTGCGGCAGAAGCCGCT
CTTCATCCTGGAGCAGTACTGCATTGCCACCTCCTAATCGCACGCACATGCGCTCACCCGAAGCAAAGCACGAGAC----
--AAAACATGTACAATCACTCA--CAGCATTTGCACTGCTGCTAATGCGATACTTCGGTTGCATTTGCATTTGCCTTAAA
CTAATCGAGCACGCACGCCTACAATTCCCGTCCCAGATCCCAGATAGTTAGCCAGTG---------GGATAATAACAACC
TTAATCCGTGGCCACAGTGGCTGCCTGCTGCATGCATGCCGGGCTTTTTTGTGACACATGTCGC-----------TCTTT
TTTCCCTGATCG----ATCGATCGGTCGGGTCGCCGTTTGGCCCCGGTGCATGCAGCGGCTAGCTCTGCTTCCGGCCGGC
GTGACCGCTAGT----ACTGCACTCGTGATGTATTTCCAGTGTGATTTGAGTAATTATTCAATG-AATTAACAGATTGTT
GGCTGTATAACAGATTGTTGGATGTATTTCCAGTGCCATTTTCATGCATACGC-----ATCATGTGCAATGATGGGGTCG
TGCCGCCGGCTTCCGTTTCCGTTTTATCCGTGATGAGAAGATCGTGACGGCGT----GCGT----GCCGAATAATCGACG
TGCTTTGAGACAAAGCGAGAGAGGGA----GCGCGAACTAGCATAGTTTGGTCTGCCACTTCGGGTAGCCCTACAGTGAT
CGATCGATCGACGATCGTGCAGAACGGATAGATGCACATGACG-------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--S------------S--------S--------------------------S---------------
-----------S-------S----------------------------------------------S-------------
---------------------------S-------------S--------------------------------------
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-------S---S--S-----------------------------------------------------------------
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------------------------S---------------S-SSSSSS--------------------------------
-----------------S-----------S---------------------------------------------S----
---------------------------------------------------------------------------S----
-S------------S--S------------------S--S-------------------------------S--------
----------------------------------------------------S---------------------------
--------------------------S---------------------------------------------S-------
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---S-SSSS-S-S-------------------------------------------------------------------
--------------S-----------------S-----------------------------------------------
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S-------------------------------------------------------------------------------
-------S--------------S--------------------------------S--S---S-----------------
------S----------------------------S--------------------------------------------
---------------------S-----------------------------------S--------------------S-
-S----------------------------------------------------------------S-----S-------
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------------------------------------------------------------------SSS-SS-S--SSSS
SS--S------S------S---SS--------------------------------------SS----------------
-----------------------------------------------------------S------SSSS-SSSSS----
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--------------------------------------------------------------------S-----------
---------SS-----------------------------------------------------S---------------
---------------S----S-----------------------------------------------------S-----
-------SS--------------------------------------------SSSS-----------------------
--------------S----------------------S------------------------------------------
-----------SS-S------------S-------S-S--------------------------------S-------S-
---S-----S--SSS----SSS----S--------S---------S----S-S-----------S---SSSSSSS-----
-----------S----------SS--------S---SS---S---------S-S------------S-----S----SS-
------------S-S-------------------S--SSS-SSSS-SSSS--------------------S-------SS
---S-----------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_245
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-----------------------------------------------------------------TAGACCGTCGACCAC
CAGAT---------------------------------------------------------------------------
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>reverse_1157
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------------------------------------CGCTCAGGTCGACATATGGA------------------------
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>forward_332
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------------------------------------------------------------------------GCTAGGTG
TGGCTTGTTCCT--------------------------------------------------------------------
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>reverse_2419
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------------------ATCACCCAGCATTTGCACTG------------------------------------------
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----------------------------------------------------------------------
