>input_sequence_56729
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-------------------------------------CCCCGCCTCCTCCTACTCCTCCCTCGCTTCCTGGCGCGGCACC
CGCACGCCGCAGCGCAGATCTCCTTCCCCGAGGAGGAGGAGGAGGAGGAGATGGTGAGCGCGTCCAGCCTGCTGCTGC--
-CGTCCTCCATGCGCGACTTCGCCTCCTGCATCGGCGACGGCGCCGTCCGCGTCGCCTGCGCCAGCCCCTCCTCCACCCT
CACCTCCGGCGGC---TCCGGCTCCGGCGCCGCC------------TCCACCCTCGCCGTCACGGCGTCCTACCGCGCCA
CGCCCCTCAACTCTGGCGCCTCCTCTGCGCCGCTGCTGTTTCGCCTCACCTGGGCCCACTCCCCGGTGGGCCCCACACTG
TCGTTTGCTCCATCCGCCGCTGCGCCTTCCGTTCTCCTTCGCAGGCGCAGGGGCACCCGCTCCTTCACTCTGGCGGACGG
CGGCGGCGGCGATGCGGATGATGCGGAGGC------------CCCCATGCTCGCCCTCTTCTGGGACCTCACGGCGGCGC
GGTACGACCCCGGGGCGTCGCCGGAGCCGCTCTACGGCTACTTCGTCGTCGCCGTGGCCGGCGCAGAGGTCGTGCTCGCG
GTGGGCGACCTGGCCGCGGAGTTCGTCAAGACCAAGTTCGAGGGCCAGATCTCC------AAGGCGCGGTGCCTGCCGGT
GT------CGCGCAGGGAGCGCGTCGTGGTCGCCGACCCGGCGGCAATGCACACCGCGAGGGTG---CGGTTCGCGGAGG
GCGGGCCGGAGCACGAGGTGAGCGTCGGGTGCGCCACCAGCTCCGGGGGAGGG---------GAGGAGCTGTGGGTCAGC
GTCGACGGGAAGCGGGCGGTGCAGGCGCAGCGGCTGCGGTGGAACTTCAGGGGCAACCAGACGGTGTTCGTGGACGGCGC
GCCGGTGGACGTCATGTGGGACCTCCACGGGTGGTGGTTCCGGGACCCGCCG---GGCTGCGCGGTGGTGATGCTCCGGG
CGAGGAGCGCGCTGGAGAGCCGGCTGTGGCTGGAGGAGGAGGGGGCG---------GCGCCGGGGTTCTCGCTCGTCGTG
CAGGCCTTCAAGGCCCCGCCATGATCTCCATGA---CGAGGTTCCGCTTCCGCTTGCTCCTCACTCTGGCTATGGCTGCG
CTACCTCTACCTGCCCATTTGGGAAAAGGTAGTTGATCGAATTTAGCAAAACCAAGACGAATGCTGTGT----TTGGTTG
GTGTTAATTTACAGCTCTAGACATATATAGCATGTTTTTAGAGGGACAATAAGCAAGCTTGGGATGA-------------
--------------------------------------------------------------------------------
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---------------------------
>chr5A_1_TraesCS5A01G130200
GCTCATGGAGATAGCGGATTGGGGACGCGGTCGTAGGAAGGAAACGACAAGGGTTCGGCCGCCGACGTAGGATAGGTCTT
TGGTAGGATAGGGTTTTTTGTTCTATATGTTCGAAATGTAATGAAAATCCACCGTGTTTGCATGAATGTCGTCCGGTTTA
TATGAAATCCGCCGTGTTTGCACGAATTTCGTTTGGTTTATATGAAATCTGTCGTGTTTGCACAAATTTCGTCTGGTTAG
TACCAATAGTTGTTGAAATGTATGCGGACAGCGTTAGATGGCGGCCTTCAGCATCAGTGTGCGCAGACTCCCCCACCCCC
TGTCCGCGGACAGATGCCGGAGCAATTTTACGGGTCCGTGTTGAAGATACCCTTATATTTTTTAAGTAGTATAATATAGA
TAATAAAGATGGCTGCATGCATCGTCCAAATGCAGAGGCCGAAGGTACATCCTCCTTTTCTAAAAATAATAATAATAAAG
ATTTTTGTTCCAAGAGACGGAACAAATGCATATGTCTATTTTTTATCTAAAGAAATTACAACCATCAATTGTGTTTTG-A
AACACATGAATGTTACTCCCCCTTATTCATATTACTTGTCGTTCAAACGGCATACGT-----------------------
--------------------------------------------------------------------------------
--------------------TTTTGTTTAAGTGGAATGAACTTTCACACATT---TTCTACAAATCTTGGCATAATGATA
ATAATAATAATAATAATAATAATAATAATAATAATAATAAACCTCTAATAAATATACATACAG-GCCCAGACAAATACTG
GTAGGATCGGACGGCTCGTGTCCTCCCGTTCCCGATCGGACGGCA---------GGCGGGCAGACTTAAAGCGGAAGGTT
CCTCCTCCTCCGGCTCGTCGCCACCTCCGCTCCGGCAGTTACCGGTTCGCT------------GCT--------GCGCGT
GCCACCCTCGCCGCCGGGTTGCCATTATGAGTTGAGTTGGAGCCCGATCTCCCCGTCCCCGTTGTGTTAGCCCCACCCCC
ACCACCTTCTCACTCATAACTCCCTCCCCCTCCCCCTCCCCGCCTCCTCCTACTCCTCCCTCGCTTCCTGGCGCGGCACC
CGCACGCCGCAGCGCAGATCTCCTTCCCCGAGGAGGAGGAGGAGGAGGAGATGGTGAGCGCGTCCAGCCTGCTGCTGC--
-CGTCCTCCATGCGCGACTTCGCCTCCTGCATCGGCGACGGCGCCGTCCGCGTCGCCTGCGCCAGCCCCTCCTCCACCCT
CACCTCCGGCGGC---TCCGGCTCCGGCGCCGCC------------TCCACCCTCGCCGTCACGGCGTCCTACCGCGCCA
CGCCCCTCAACTCTGGCGCCTCCTCTGCGCCGCTGCTGTTTCGCCTCACCTGGGCCCACTCCCCGGTGGGCCCCACACTG
TCGTTTGCTCCATCCGCCGCTGCGCCTTCCGTTCTCCTTCGCAGGCGCAGGGGCACCCGCTCCTTCACTCTGGCGGACGG
CGGCGGCGGCGATGCGGATGATGCGGAGGC------------CCCCATGCTCGCCCTCTTCTGGGACCTCACGGCGGCGC
GGTACGACCCCGGGGCGTCGCCGGAGCCGCTCTACGGCTACTTCGTCGTCGCCGTGGCCGGCGCAGAGGTCGTGCTCGCG
GTGGGCGACCTGGCCGCGGAGTTCGTCAAGACCAAGTTCGAGGGCCAGATCTCC------AAGGCGCGGTGCCTGCCGGT
GT------CGCGCAGGGAGCGCGTCGTGGTCGCCGACCCGGCGGCAATGCACACCGCGAGGGTG---CGGTTCGCGGAGG
GCGGGCCGGAGCACGAGGTGAGCGTCGGGTGCGCCACCAGCTCCGGGGGAGGG---------GAGGAGCTGTGGGTCAGC
GTCGACGGGAAGCGGGCGGTGCAGGCGCAGCGGCTGCGGTGGAACTTCAGGGGCAACCAGACGGTGTTCGTGGACGGCGC
GCCGGTGGACGTCATGTGGGACCTCCACGGGTGGTGGTTCCGGGACCCGCCG---GGCTGCGCGGTGGTGATGCTCCGGG
CGAGGAGCGCGCTGGAGAGCCGGCTGTGGCTGGAGGAGGAGGGGGCG---------GCGCCGGGGTTCTCGCTCGTCGTG
CAGGCCTTCAAGGCCCCGCCATGATCTCCATGA---CGAGGTTCCGCTTCCGCTTGCTCCTCACTCTGGCTATGGCTGCG
CTACCTCTACCTGCCCATTTGGGAAAAGGTAGTTGATCGAATTTAGCAAAACCAAGACGAATGCTGTGT----TTGGTTG
GTGTTAATTTACAGCTCTAGACATATATAGCATGTTTTTAGAGGGACAATAAGCAAGCTTGGGATGAAAGTGAAACATAA
TTCATGGATCATTTTAGGTGGTATACTCAGAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGATTTACTGCGAGTGTG
CAGTGCAGGATTCATCCCCTCTGTTTGTTTTCCCTCTTTTTATCCCAACCATTTTTAGTGGTGTGTGCTCGTACAGTTGA
CAAATAATTATACAACATTTCAGAATCTTGATTCTGCTCTTCTCTTCTGTGTGATCAAGGAGGGTGCTCGTAGCTCAATA
CTCATCATTGGTTGCCTTGCAATATGTTCCCTCCGTCCTACAATTCTGGTCTTACATTTGTGGTCTTACATTTGTCTAGA
TACGAACGAAAGTACCAGCAGCAACAGCAGTCGTGATTCTGGCGCTGTTTTATACGGGTGATTTGTGTCTGTCTGCATAA
ATTCTGCAATTCAGCTCTGGGGTTCCCACAATCTTTTTTTTTCCGGGGGGCGTGTTCCCACAATCTGAGATCCATCAGAG
CATCTACAACAAATTTGACTACCCGCACTGCACTGTATGTCCGCGGACGTGTCTGATGGCCTCTCATTTGTCCGCCACTA
CAACCACACCCCTCGTTTGCAAACCCCTATTCTCATTTGTCCGCCACTACAACCACACCCCTCGTTTGCAAACCCCTATT
TCCATACTCATCCATGCAATGCAACGTTGAATTCATCATGCATAGATAAAACGAGCTACATTTGAAAGAAAAGTTCCCTA
CTTCTACTTTGTCGTCGTCGGAGTTGTAGATGACACCCTTGCCGAAGCCGCTGGCCTCGTGATCATTGGCTGCAGGGCGA
AGCTCTGGGGCCTCCTCATCGTCCTCGTTCATGAATAGCCGCTCATGCCTCACGTCGGCGAGGTGGATACGGCGGCGGTT
CGCCACCAACACCCGCTCGGACAGGAGCGACTCCAACATGGCTTGGTTTTCAGCCACGAGGATGGGATTGGCGATGAGCG
CCTGAATGCGGTAGCTTGCTTCGCCTC
>chr5B_83
--------------------------------------------------------------------------------
--GTAGGATAGG--TTTTTTTTCTAAATGTTCGAAATGTAATGAAAATCCACCGTGTTTGCATGAATGTCATCCGGATTA
TATGAAATCCTTA-------CACCAAGTTCGTTCGGTTTATATGAAATATGTCGTGTTTGCACAAGTTTTGTCCGGTTAG
TTCCAACAGTTGTTGAAATGAATGCGGGCAACGTTGGATGGCAGCCTCCGGCATTAGTATACGGCAGACTGGT--CCCCC
TATCAGCGCACAGATGCCGGAGCAAATTTGCGGGTCAGCGTTTGAGATACCCTTATATTCTTTTT-TAGTATAGTATAGA
TAATAAAGAT----------------------------------------------------------------------
--TTTTGTTCCAAGAGAAAGAACAAATTTATATGCCTC--TTTTATCTAAAATAATTACAGCTATCAACCGTGTTTCGAA
AACACATGAATGTTACTCCCTTGACCCG-TATTACTTGTCGTTCAAACCGCATATTACTTGTCATAGGGAGTATGATTTA
TTAAAAAAAATCAATGGGATACTTTTATTCCTATATAACGTACGTAATTTTGAAATATCTGAAGCGAACTTTGTCCTTTC
TCCAAATACCAATTTGAAAGTTTTGTTTATGTAGAATGAAGTTTCACACATTTTCTTCTACAAATCTTGGCATAATAATA
AACCTGTAAT-------------------------------------ATAAATATACATACAG-GCCCAGACAAAAACTG
GTAGGATCGGACGGCTCGTGCGCTCCCGTTCCTGATCGGACGGCGGGATCCGCGGGCGGGCAGACTTAAAGCGGAAGGTT
CCTCCTCC---GGCTCGTCGCCACCTCCGCTCCGGCAGTTACCGGTTCGCTGCTGCGTGCTGCGCTGTGCCTGCGCGCGT
GCCACCCTCGCCGCCGGGTTGCCATTATGAGTTGAGTTGGAGCCCGATCTCCCCGTCCCCGTTGCGTTAG------CCCC
ACCACCTTCTCACTCATAACTCCCTCCCCTCCCCCTCCCCCGCCTCCTC----TCCTCCCTCGC-TCCTGGCGCGGCACC
CGCACGCCGCAGTGCAGATCTCCTTCCCCGAGGAGGAGGAGGAGGAG---ATGGTGAGCGCGTCCAGCCTGCTGCTGC--
-CGTCCTCCATGCGCGACTTCGCCTCCTGCATCGGCGACGGCGCCGTCCGCGTCGCCTGCGCCAGCCCCTCCTCCACCCT
CACCTCCGGCGGCGGCTCCGCCTCCGG------C------------TCCACCCTCGCCGTCACGGCGTCCTACCGTGCCA
CGCTCCTCAACTCTAACGCCTCCTCTCCGCCGCTGCTGTTTCGCCTGACCTGGGCCCACTCCCCGGTGGGCCCCACACTG
TCTTTTGCTCCATCCGCCGCTGCGCCTTCCGTTCTCCTTCGCAGGCGCAGGGGCACCCGCTCCTTCACTCTCGCGGACGG
CGGCA---GCGATGCGGATGATGCGGAGGCGGGCTCGGAGCCCCCCGTGCTCGCCCTCTTCTGGGACCTCACGGCGGCGC
GGTACGACCCCGGGGCGTCGCCGGAGCCGCTCTACGGCTACTTCGTCGTCGCCGTGGCCGGCGCAGAGGTCGTGCTCGCG
GTGGGCGACCTGGCCGCGGAGTTCGTCAAGACCAAGTTCGAGGGCCAGATCTCC------AAGGCGCGGTGCCTGCCGGT
GT------CGCGCAGGGAGCGCGTCGTGGTCGCCGACCCGGCGGCAATGCACACCGCGAGGGTG---CGCTTCGCGGAGG
GCGGGCCGGAGCACGAGGTGAGCGTCGGGTGCGCCACGAGCTCCGGGGGAGGG---------GAGGAGCTGTGGGTCAGC
GTCGACGGGAAGCGAGCGGTGCAGGCGCAGCGGCTGCGGTGGAACTTCAGGGGCAACCAGACGGTGTTCGTCGACGGCGC
GCCGGTGGACGTCATGTGGGACCTCCACGGGTGGTGGTTCCGGGACCCGCCG---GGCTGCGCGGTGGTGATGCTCCGGG
CAAGGAGCGCGCTGGAGAGCCGGCTGTGGCTGGAGGAGGAGGGGGCG---------GCGCCGGGGTTCTCGCTCGTCGTG
CAGGCCTTCAAGGCCCCGCCATGATGTCCATGA---TGAGGTTCC-----CGCTCGCCCCTCACTCTGGCTATGGCTGCT
CTACCTCTACCTGCCCATTTGGGAAAAGGTAGCTGATTGAATTTAGCAAAACCAAGACGAATGCGATGTTTGGTTGGTTG
GTGTTAATTTACAGCTCTAGACATATGTAGCTTGTTTTTGGAGGGACAATAAGC----TCGGGATGAAAGTGAAACATAA
TTCATGGATCATTTTAGGTGGTATACTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAT-------------
--------------------------------------------------------------------------------
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---------------------------
>chr5D_704
--------------------------------------------------------------------------------
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------------------------------ATAATAATAAACCTCTAATAAATATACAGGCCCAGCCCAGACAAATACTG
GTAGGATCGGACGGCTCGTGTCCTCCCGCTCCTGATCGGACGGCGGGATCCGCGGGCGGGCAGACTTAAAGCGGAAGGTT
CCTCCTCCTCCGGCTCGTCGCCACCTCCGCTCCGGCAGTTACCGGTTCGCT------------GCTGTGCCTGCGCGCGT
GCCACCCTCGCCGCCGGGTTGCCATTATGAGTTGAGTTGGAGCCCGATCTCCCCGTCCCCGTTGCGTTAG------CCCC
ACCACCTTCTCACTCATAACTCCCTCCCCTCCCCTCCACTCC------CCTCCCCCTCCCTCGC-TCCTGGCGCGGCACC
CGCAGGCCGCAGCGCAGATCTCCTTCCCCGAGGAGGAGGAGGAG------ATGGTGAGCGCGTCAAGCCTGCTGCTGC--
-CGTCCTCCATGCGCGACTTCGCCTCCTGCATCGGCGACGGCGCCGTCCGCGTCGCCTGCGCCAGCCCCTCCTCCACCCT
CACCTCCGGCGGCGGCTCCGGCTCCGG------CTCCGGCGCCGCCTCCACCCTCGCCGTCACGGCGTCCTACCGCGCCA
CGCCGCTCAACTCTAACGCCTCCTCTCCGCCGCTGCTGTTTCGCCTGACCTGGGCCCACTCCCCGGTGGGCCCCACACTG
TCGTTTGCTCCGTCCGCCGCCGCGCCTTCCGTTCTCCTTCGCAGGCGCAGGGGCACCCGCTCCTTCACTCTGGCGGATGG
CGG---CGGCGATGCGGATGATGCGGAGGCGGGCTCGGAGCCCCCCATGCTCGCCCTCTTCTGGGACCTCACGGCGGCGC
GGTACGACCCCGGGGCGTCGCCGGAGCCGCTCTACGGCTACTTCGTCGTCGCCGTGGCCGGCGCAGAGGTCGTGCTCGCG
GTGGGCGACCTGGCCGCGGAGTTCGTCAAGACCAAGTTCGAGGGCCAGATCTCC------AAGGCGCGGTGCCTGGCGGT
GT------CGCGCAGGGAGCGCGTCGTGGTCGCCGACCCGGCGGCAATGCACACCGCAAGGGTG---CGCTTCTCGGAAG
GCGGGCCGGAGCACGAGGTGAGCGTCGGGTGCGCCACGAGCTCCGGGGGAGGG---------GAGGAGCTGTGGGTCAGC
GTCGACGGGAAGCGGGCGGTGCAGGCGCAGCGGCTGCGGTGGAACTTCAGGGGCAACCAGACGGTGTTCGTGGACGGCGC
GCCGGTGGACGTTATGTGGGACCTCCACGGGTGGTGGTTCCGGGACACGCCG---GGCTGCGCGGTGGTGATGCTCCGGG
CGAGGAGCGCACTGGAGAGCCGGCTGTGGCTGGAGGAGGAGGGGGCA---------GCGCCGGGGTTCTCGCTCGTCGTG
CAGGCCTTCAAGGCCCCGCCATGATCTCCATGACCATGAGGTTTC-----CGCTTGCTCCTCACTCTGG-----------
------CTACCTGCCCATTTGGGAAAAGGTAGTTGATTGAATTTAGCAAAACCAAGACGAATGCGATGTTTGG----TTG
GTGTTAATTTACAGCTCTAGACATATATAGCTTGTTTTTAGAGGGACAATAAGC----TTGGGATGAAAGTGAAACATAA
TTCATGGATCATTTTAGGTGGTAATACTC---------------------------AGAGAGAGATTTACTGCGAGTGTG
CAGTGCAGGAT-CATCCCCTTTGTTTGTTTTCCCTCTTT--ATCCCAACCATTTTTAGTGGTGTGTGCTCGTACAGTTGA
CAAATAATTATACAACATTTCAGAATCTTGATTCTGCTCTTCTCTTCTGTGTGATCAAGGTGGGTGCTCGTAGCTCAATA
CTC-----------------------------------------------------------------------------
------------------------------------------------TTTATACCGGTGATTTGTGTCTGTCTGCATAA
ATTCTGCAATTCAGCTCTCGGGTTCCCACAATCT----------------------------------------------
--------------------------------------------------------------------------------
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>chr4A_1094
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--------------------------------------------------ATGGTCAGCGCCTCCAGCCTGCTGCTGCTG
CCGTCCTCCGTGCGGGACCTCGCCTCCTGCGTCGTCGCCGACGT------CGCCGCCTGCACCACCCCCTCCTCCACCCT
CACCTCCCCCGCCT---------------------------CCCCCTCCACGCTCTCCGTCACCGTCTTCTACCGCGCCG
CCGCGCTCCTGCCCGGGCAGAGCTCC---CCCGCGCACCTGCGGCTCACCTGGACCCGCTCCCCGCTCGGCCCCACGCTC
TCCTTCTCCCCCTCCGCCTCCAACCCCGCCGTGGTCCTCCGCAGGCGCAGGGGCACGCAGTCCGTCCCCGTCGACGACGC
CGCACGGCCACA------------------------------------GCTCGTCGTGTTCTGGGACCTCACCGCCGCGC
GCTACGACGCC------TCCCCGGAGCCGCACTCCGGCTACTACTTCGTCGCCGTCGCCGGCGCCGACGTCGTGCTGGCC
GTGGGCGACCTGGCGGCCGAGTTCGTCGAGGAGAGGTTCGAGGGCCGGATCCCC------AAGGCCGCGGCTTTGACCGT
CCCGTTCGCGCGCAGGGAGCGCGTCGTTGCGCCGGACCCGGCGGCGATGCACACCGCGCGGCGCGTCCGGTTCGCCGAGG
GCGGCCCGGATCACGAGGTAAGCGTAGGGTGCTCCGGCGGCG------------CGGAAGAAGAAGAGCTGTGGGTGAGC
GTCGACGGGAAGCGCGCGGTGCAGGCGCGGCGGCCGCGGCTGAACTTCCGGGGGAACCAGACCGTGTTCGTGGACGGCGC
GCCGGTGGACGTCATGTGGGACCTGCACGGCTGGTGGTTCCGGGAGCCTCCGTACGGCAGCGCGGTGGTCATGCTCCGGG
CGCGCAGCGCGCTGGAGAGCCGGCTGTGGCTAGAGGAGGAGGAGGTCGCCACCGCCGCGCCGGGGTTCTCGCTCGTCCTC
CAGGCCTTCAAGTCCC----------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr4D_1094
--------------------------------------------------------------------------------
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--------------------------------------------------ATGGTCAGCGCCTCCAGTCTGCTGCTGCTG
CCGTCCTCCGTGCGGGACCTCGCCTCCTGCGTCGTCGCCGACGT------CGCCGCCTGCACCACCCCCTCCTCCACCCT
CACCTCCCCCGCCT---------------------------CCCCCTCCACGCTCTCCGTCACCGTTTTCTACCGCGCCA
CCGCACTCCTGCCCGGGCAGAGCTCC---CCCGCGCATCTGCGGCTCACCTGGACCCGCTCCCCGCTTGGCCCCACGCTC
TCCTTCTCCCCCTCCGCCTCCAGCCCCGCCGTGGTCCTCCGCAGGCGCAGGGGCACGCAGTCCGTCTCCGTCGACGGCGC
CGCACAGCCACA------------------------------------GCTCGTCGTGTTCTGGGACCTCACCGCCGCGC
GCTACGACGCC------TCCCTGGAGCCGCACTCCGGCTACTACTTCGTCGCCGTCGCCGGCGCCGACGTCGTGCTGGCC
GTGGGCGACCTGGCGGCCGAGTTTGTCGAGGAGAGGTTCGAGGGCCGGATCCCC------AAGGCGGCGGCTTTGACCGT
CCCGTTCGCGCGCAGGGAGCGCGTCGTTGCGCCGGACCCGGCGGCGATGCACACCGCGCGGCGCGTCCGGTTCGCCGAGG
GCGGCCCCGATCACGAGGTAAGCGTAGGGTGCTCCGGTGGCGGCGTCGGCGGCGCGGCAGAAGAAGAGTTGTGGGTGAGC
GTCGACGGGAAGCGCGCGGTGCAGGCGCGGCGGCCGCGGCTGAACTTCAGGGGGAACCAGACCGTGTTCGTGGACGGCGC
GCCGGTGGACGTCATGTGGGACCTGCACGGCTGGTGGTTCCGGGAGCCTCCGTACGGCAGCGCCGTGGTCATGCTCCGGG
CGCGCAGCGCGCTGGAGAGCCGGCTGTGGCTAGAGGAGGAGGAGGTCGCCACCGCCGTGCCGGGGTTCTCGCTCGTCCTC
CAGGCCTTCAAGTCCCGCGC------------------------------------------------------------
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>chr4B_1094
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--------------------------------------------------ATGGTCAGCGCCTCCAGTCTGCTGCTGCTG
CCGTCCTCCGTGCGGGACCTCGCCTCCTGCGTCGTCGCCGACGT------CGCCGCCTGCACCACCCCCTCCTCCACCCT
CACCTCCCCCGCCT---------------------------CCCCCTCCACGCTCTCCGTCACCGTGTTCTACCGCGCCA
CCGCACTCCTGCCCGGCCACAGCTCT---CCTCTGCATCTGCGGCTCACCTGGACCCGCTCCCCGCTCGGCCCCACGCTC
TCCTTCTCCCCCTCCGCCTCCAACCCCGCCGTGGTCCTCCGCAGGCGCAGGGGCACGCAGTCCGTCTCCGTTGACGACGC
CGCACAGCCACA------------------------------------GCTCGTCGCGTTCTGGGACCTCACCGCCGCGC
GCTACGACGCC------TCCCCGGAGCCGCACTCCGGCTACTACTTCGTCGCCGTCGCCGGCGCCGACGTCGTGCTGGCT
GTGGGCGACCTGGCGGCCGAGTTTGTCGAGGAGAGGTTCGAGGGCCGGATCCCGAACCCGAAGGCGGCGGCTTTGACCGT
CCCGTTCGCGCGCAGGGAGCGCGTCGTTGCGCCGGACCCGGCGGCGATGCACACCGCGCGGCGCGTCCGGTTCGCCGAGG
GCGGCCCGGATCACGAGGTAAGCGTAGGATGCTCCGGCGGCG------------CGGAAGAAGAAGAGCTGTGGGTGAGC
GTCGACGGGAAGCGCGCGGTGCAGGCGCGGCGGCCGCGGCTGAACTTCAGGGGGAACCAGACCGTGTTCGTGGACGGCGC
GCCGGTGGACGTTATGTGGGACCTGCACGGCTGGTGGTTCCGGGAGCCTCCGTACGGCAGCGCCGTGGTCATGCTCCGGG
CGCGCAGCGCGCTGGAGAGCCGGCTGTGGCTAGAGGAGGAGGAGGTCGCTACCGCCGCGCCGGGGTTCTCCCTCGTCCTC
CAGGCCTTCAAGTCCCGCGC------------------------------------------------------------
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---------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS----------SS-----S-----S--------------------------------------------S-----S---
----------SSSSSSSSSS---S--S------S--------------S----------------S---S---S------
-S----S-------------S------S--S----S------S----S-S----S---S-S--SSSSSSSSSSSS-----
-S--S---S----------------S---S------S-S---SS---------------S---SSS-------S------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS---------------SS--------SS-----S--SSS-----------SS-------S-S-----SS------S---
--------------------SSSSSSSSS-------------------S-----SSS-----------------------
--------------------------------------------------------------------------------
-----------------------------S--S-------S-----------------------------------S---
-SSS-SSS-SSSSSSSSSSSSSSSSSSSSS--------------------------------------------------
--------------------------------S-----------S-----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S-----SSSSSS----
-----------------------------SS-----S--------------S------------S---------------
-----------------------------------------------SSS------------------------------
--------------------------------------------------------------------------------
---------------------------SSSSSS-----------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S--------SSSSS-----------------------------S
-------------------------------------S--------------------------SS--------------
-------------------------------S----------------------SSSS----------------------
---------------------------SS-------------------S-------------------------------
-----------S--------S------------------SS---------------------------------------
------------------------------------------------------------S-------------------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S------------------------
------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_27
-------GAGATAGCGGATTGGGGACG-----------------------------------------------------
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---------------------------
>reverse_1172
--------------------------------------------------------------------------------
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---------------------------------------------------ACTCCTCCCTCGCTTCCTG----------
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---------------------------
>forward_431
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------GCTGCATGCATCGTCCAAAT-------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>reverse_2287
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------CTTCCGCTTGCTCCTCACTC--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>forward_438
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------GCATCGTCCAAATGCAGAGG------------------------------------------
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>reverse_2320
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
CTACCTCTACCTGCCCATT-------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>forward_444
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TCCAAATGCAGAGGCCGAAG------------------------------------
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---------------------------
>reverse_2509
--------------------------------------------------------------------------------
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----------------------------AGAGAGAGAGAGAGAGAGAGCG------------------------------
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---------------------------
