>input_sequence_56717
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGAGGTGCGCAGGGAGCC
TTCTTCTCCTGCTGCTTCTGCTCTCCCTGTCTGCCTCCACCGCCGAAGCAAACAACAAGGTTGGTACTTCGCAGTAACTT
CGCAATAACTTCTTGTC--------CACGGCACGCTCACACTGCGTGCAGGTGGCGTTGTCAGTGGCAGTGAGTGCCAGC
AATGGCGGAGTAGTGCTGATATCTCGCTTCTCGACCGTGAAAATGCAGGAGAGCTTGGGCGACAACGCGGTACCCTTGAC
CGGCCGGGGATGGCACCTGAGAGGACGGAGGTCAATGGCGGCTCGAGGGCATGGAGGAGCGGGGAGTGATGAGGCCGTGG
GCGCCAGCAACACAGGTGCAAACCCTGCCCGTGCCCGCGGAGGGAAGAAAACCGTAGAGGTCACCGTTGTCGGGTTAGGC
GGTGAGAGCGCCGGGCAAAGGAGGAGTGGCGGCGGCAGGCGCGAATTTGACGGCCAAGTGCCGCTCCATTCGGATTACCG
CACTCCCAGAGTTCATCCGCCAAAGAATAACTGAGGCGCGGCAAAAAGGCAAAGGCTTCTTCTTGCTTCTTGCCACTGAT
TGATTA---CTGCTA----------AGTGGTAGTTCAA-TTTTTCTCTCCCGAAGTAAAAGTGCAGTGGTAGTGCGGTGC
TCCTCGACAATTAAACAAGCTAGTGTTCTTTGCTTGTACTGTAGAGATTCTTGTCAAATCTTCCACCCCATCGCCCAAAC
TTGAACCTGTAATTAGTGTACTGCAAATGGGTAGCGTGGAGAAGGGCAATTAGTTAGCTGTACTGTTTTT----TGTCTG
ACAGCAAACCACTGGACCCTGAATGATGAACTGATACATGTCATTTCTGTTGTTGCAGGAGCAAATGAAGAAGCAGATCA
TACGTCTGCTGAATTTGTACATGATGAGGCAAGTGCATCAGCCGCACGCTTTACATGAATTTATCATGGCAGACATTATC
TGCACCGTACATG-------GCTGGCCACATCACAATCGACACACGACTTCAGTTCCTGCCATGTGCTGACGGCTGCAGT
TTCATTTCCAGGGTAAACAGAGCAAGGGATCAGCAGCTCGGCCCGTGCTTCAGGGAGCAAGCGGCCATCGTCATCGTCAC
CATGGCGGCGACGCGGCCTCCATGGCGTCCGACATGCTGAGGATGGACTACTCCGTCTCCGTGGACGTCCACAGCCGACG
GCCCATCAACAACGACGCTCCGTTGGATGAGCTCGCGGAGAAGAAGCCTTAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr5B_1_TraesCS5B01G249200
GTTCTTATTTATATGCACTATTCATTGTTTGGCCGTGACGATCGACGTGTAAGTGTTTGCATGTATTTGATGTTCCAAAA
ATAAGACA-TGTGGTTGGGTCATTTGAGGACCGGTCGGTCACTGTCCACGGATGTATAAGGCCCCGGAATAAGCAATTTC
AATTGTAGATGCTCTAACTTCTGCTCCCTCGATAAAGTAAAATGCTTTTACATTTCATCAGGCTGAAACTACTCAGACAA
CTAAAAAAAGGCTGAAACTAGTGAATGCGAACGTACGTTGGGGGCATAGCAGCAG---CGCGCCAGACTTCTGATTCGAA
GGAATCCGAGACCGCAGCTAGTGATCTCCCCACAAGAACCAAAACAGCACCATCGGAACCCGGTTCCCACACACGATTGT
TTTCTCAGTCACACCCCAC----GCACGCACGCAAGGTCCTTCGATCCGAGGACACCACCACCA------CAGAAGCACG
CCTCGCCGTGGCGGGCGCGCGCGCATGGCGGCGCATTCCCAGGGACAGAAAAGAACAAGCCCCCCGCCTTCCAATTCCGT
CCGCGTCGGCCGCGCCGAGGCGGCGGAGGAGGCACGTACTCCTCCCCTCCCCTGTCTGCATGGCCGGTGCGTGCATGCGT
GCGTGCGCGCACCGGAGATCGCCCGAGGTTTTT----CTGTACTACATCCTCCATGGCCGGGACCATGGCATCGGTGCCT
--GCGCGCGCGCCGGCGACAGGCCGCGGATTAAGAAACGGGAAAGCGCACACA-CAGCAGTTTGATATTGGGCGCGTCAG
ACGGTGCCGGGTTTGAATATGCGGCAGCTCCCTTTGACTAGCATCGCTAGCTGTGTGCGGTGGAGCTGAGCTGAGCTGAT
CGGTGTGGTGTGGATGGATCTAATCTGCCTCCTTGGTATATATGAAACCCCTGCACTGTCACCTAAACCTCTCCTTTCCC
CTCCGCTCGTCCGGTTCAGAGGTGCCAGCAGGTAGCTCCTTGTTGCCAAGTAGCGGAGACCATGAGGTGCGCAGGGAGCC
TTCTTCTCCTGCTGCTTCTGCTCTCCCTGTCTGCCTCCACCGCCGAAGCAAACAACAAGGTTGGTACTTCGCAGTAACTT
CGCAATAACTTCTTGTC--------CACGGCACGCTCACACTGCGTGCAGGTGGCGTTGTCAGTGGCAGTGAGTGCCAGC
AATGGCGGAGTAGTGCTGATATCTCGCTTCTCGACCGTGAAAATGCAGGAGAGCTTGGGCGACAACGCGGTACCCTTGAC
CGGCCGGGGATGGCACCTGAGAGGACGGAGGTCAATGGCGGCTCGAGGGCATGGAGGAGCGGGGAGTGATGAGGCCGTGG
GCGCCAGCAACACAGGTGCAAACCCTGCCCGTGCCCGCGGAGGGAAGAAAACCGTAGAGGTCACCGTTGTCGGGTTAGGC
GGTGAGAGCGCCGGGCAAAGGAGGAGTGGCGGCGGCAGGCGCGAATTTGACGGCCAAGTGCCGCTCCATTCGGATTACCG
CACTCCCAGAGTTCATCCGCCAAAGAATAACTGAGGCGCGGCAAAAAGGCAAAGGCTTCTTCTTGCTTCTTGCCACTGAT
TGATTA---CTGCTA----------AGTGGTAGTTCAA-TTTTTCTCTCCCGAAGTAAAAGTGCAGTGGTAGTGCGGTGC
TCCTCGACAATTAAACAAGCTAGTGTTCTTTGCTTGTACTGTAGAGATTCTTGTCAAATCTTCCACCCCATCGCCCAAAC
TTGAACCTGTAATTAGTGTACTGCAAATGGGTAGCGTGGAGAAGGGCAATTAGTTAGCTGTACTGTTTTT----TGTCTG
ACAGCAAACCACTGGACCCTGAATGATGAACTGATACATGTCATTTCTGTTGTTGCAGGAGCAAATGAAGAAGCAGATCA
TACGTCTGCTGAATTTGTACATGATGAGGCAAGTGCATCAGCCGCACGCTTTACATGAATTTATCATGGCAGACATTATC
TGCACCGTACATG-------GCTGGCCACATCACAATCGACACACGACTTCAGTTCCTGCCATGTGCTGACGGCTGCAGT
TTCATTTCCAGGGTAAACAGAGCAAGGGATCAGCAGCTCGGCCCGTGCTTCAGGGAGCAAGCGGCCATCGTCATCGTCAC
CATGGCGGCGACGCGGCCTCCATGGCGTCCGACATGCTGAGGATGGACTACTCCGTCTCCGTGGACGTCCACAGCCGACG
GCCCATCAACAACGACGCTCCGTTGGATGAGCTCGCGGAGAAGAAGCCTTAGTTAGCTGCCGGTCGACACACGCGAGAAG
ATGCGACTCGATCCTATTGCAATAAGATACAGATAGTGACATAGTGTTAGGCTAGCTAGTAGGGGCCATTAGCTAGCACA
TGGTTAGCTTATTAGTTAGGGAGGGAGGGACTCTCCGGGCCGCACGTAGAGCCCATGCCCGACCCTCGATCGATGGAGCA
--------GATCGAGGTGAGTTGGATGGGCAGTTTTGGTTGCGCCGTGCTCGGAGAGGTAGTAGCGTCTGTAA----TCT
GTCAGCAGCAACATCTCTGAAGCTGCAGAGAATGTAACGCATGATA-TACTTCAGGTTTCAGCA------TGTGGCAAGC
AGTATGTGTCTCGGCGTACG-------------AAATGCCTTGCAGGTTCAGAGTTCAGAGCAAAGTGATCAGCCCATCG
CAGCTGTTATATTACACGTCTCCGAGCTCCCATCATCATAGTTGCTTCCGTCTTGGGGCTCGGATCCTTCCAGACCAAAC
GAAAGGAGGAAGCTAGCTAGCTATGCCTGCCTGCCTGCCTTGCCTTGCCGTAGCAGCCAGCCTGCGTGCCCGCATCTGCG
CTCTCGGCCGGCCAATGGCAGCCGTGGCGAACCGGACCACGCCAACTCCCCATGCCGCCGCCGCGCCGTGACAGCGATAG
GGCTGGCCGCCAATAATAGAGGAACGGGACGATCGGAGTAGACGATCACACGGCA-----GCGAAGCATTGGGAGGCAGC
CACATCAGGGTGGTCAGAGCGAGACACCTGTGGACACCTGTTGCTGTTATCCTGC--ACCTGGACCGAGCGATGGACGTC
GTCTTCTGCACGACTGCACCCACGACCATGCTCGCTTGAAGTTTTCTGATCTAG---TACGTGATGGGCTTGGACTTCTT
CCGTCTAGTTTTTATCTGTAGTTCACAGTCCAGATGCAGGAAAGCGACCTCCATTGATGATGATGTTCTCACTCTGGCGT
GTGACACGGACCGGCCACCTAACCTGACGGGAAAAGAAGGGCCTGGAGAAGTCA
>chr5A_6
-----TATTTTTATGCAACATCCATTGTTTGGCCGCGATGATCGACATGCAAGTGTTTGCATGTATTTGATGTTCCAAAA
TTAAGGAATTGTGGATGGGTCATTTGAAGACCGGACGGTCACTGTCCATGGACACGTACTTCATAGATGTGATCT-----
---------------------------------------AAATGCTTTTATATTTTTTTTACACTCTATC----------
----------GCTGAAACTACTGAATGCGAACGTACGTTGGGTGCCTAGT---AG---CACGCGAGACGTCTGATTCGAA
GGAATCCGATACCGCAGCTAGCGATCTCCCTACAAGCACCAAAACAGCACCATGGGGAGCCGGATCCCACGCACGATTGT
TTTCCTACCCACACCCCACGCACGCACGCACGCAAGCTCCTTCGATCCGAGGACACCACCACCAGCACCGCAGAAGCACG
CCTCGCCGTGGCGCGCGCGCGCGCATGGCGGCGCATTCCCAGGGACAGAAAAGAACAAGCCCCCCGCCTTCCAATTCCGC
CCGCGTCGGCCGCGCCGAGGCGGCGGGGGAGGCACGTACC---CCCCACCCCTGTCTGCATGGCCGGTGCG----TGCGT
GCGTGCGCGCACCGGAGATCGCCCGAGGTTCTCTGTACTGTACTACGTCCTCCATGGCCGGGACCAGGGCATCGGTGCCT
GCGCGCGCGCGCGGGCGACAGGCCGCGGATTAAGAAACGGGAAAGCGCACACAGCAGCAGTTTGATATTGGGCGCGTCAG
ACGGTGCCGGGTTTGAATATGCAGCAGCTCCCTTTGACCAGCATCGCTAGCTGTGTGCGGTGGAGCTGAGCTGAGCTGAT
CGGTGTGGCGTGGATGGATCTAATCTGCCTCCTTGGTATATA--AAACCCCTGCATTGTCACCTAAACCTCTCCTTTCCC
CTCTGCTCGTCCGGCTCAGAGGTGCCAGCAGGTAGCTCCTTGTTGCCAAGTAGAGGAGACCATGAGGCGCGCAGGGAGCC
TTCTTCTCCTGCTGCTTCTGCTCTCCCTGTCTGCCTCCACCGCCGAAGCACACAACAAGGTCGGTAAAC------AATTT
CGCAGTAACTTCTTGTTCACGCCTTCACGGTACACTCACACTGCGTGCAAGTGGC----------------AGTGCCAGC
AATGGCGGAGGAGTGCTGATATCTTGCTTCTCGATCGTGAAAATGCAGGAGAGCTCGGGCGACAACGCGGTGCCCTTGAC
CGGCCGGAGATGGCACCTGAGAGGACGGAGGGCAATGGCGGCCCGAGGGCATGGAGCAGCGGGGAGGGATGAGGCCGTGG
GCGCCAGCAACACAGGTGCAAACCCTGCCCGTGCCCGCGGAGGGAAGAAAAGCGTAGAGGTTACCGTTGTCGGGTTAGGC
GGTGAGAGCGCCGGGCCAAGGAGGAGTGGCGGCGGCAGGCGCGAGTTTGACGGCCAAGTGCCGCTCCATTCCGATTACCG
CACTCCCAGGGTTCATCCGCCGAAGAATAACTGAGGCGCGGCA-AAAGGCAAAGGCTTCTTCTTGCTTCTTGCCACTGAT
TGATGATTACTGCTAGTGGTACAGTAGTAGTAGCTCTGTTTTTAA--TCATGAAGTAAAATTATAGTGGTAGTGCAGTGC
TCCGCGTCTGTTAAATAAGCTAGTGCTCTTTGCTTGTACTGTAGAGATTCTTGTCAAATCTACCACCCCATCACCCAAAC
TTGAGCCTGTAATTAGTGTGCTGCAAATGGGTCGCGTAGAGAAGGGCAATCAATTAGCTGTACTGATTTTATTTTGTCTG
GCAGCAAACCACTGGACCCTGAATGATGGGCTGATACGTGCCATTTCTGTTGTTGCAGGAGCAAGTCAAGAAGCAGATCA
GGCGTCTGCTGAATTTGTACATGATGAGGCAAGTTCAGCAGCCGCACGCTTTACATGA-TTCAGCATTACAGGCATTATT
TGCACGTCACA----------CTGGCCACATCACAGTCGACACACAACTTCAGTTCCTGCCATGTGCTGACGGCTGCGGT
TTCATTTCCAGGGTAAACGGAGCAAGAGGCCAGCTGCTCGGCCCATGCTTCAGGGAGCAAGCGGCCATCGACATCGTCAC
CACGGCGGCGACGCGGCCGCCATGGCGTCCGACGTGCTGAGGATGGACTACTCCGTCTCCGTGGACGTCCACAGCCGGCG
GCCCATCAACAACGACGCTCCGTTGGATGAGCTCATGGAGAAGAGGCCCTAGCTAGCTGCCGGTCCACACAAGCGAGAAG
ATGCGGCTCCTAACGACAT-----AGATACAGATAGCGTTAGGC-------------------------TAGCTAGCACA
TGGTTAGCTTGGC---TAGGTAGGGTGGGACCCTCCGGGCCGCACGTGGAGCCCATTTCTGAACCTCGACCGATCAATGG
AACTGATCGATCGAGGTGAGTTGGATGGGCAGTTTTGGTTGCGCCGTGCTTGGAGGGGTAGTGGCGCCTGTAATCCGTCT
GTCAGCAGCTTCATCTCTGAAGCTGCAGAAAACAGAGCTCATGAT-----------TTTCAGCATGTGGCTGTGGCAAGC
AGTATGTCCTC----TCCTCGCCGTAAAGAAAT----GCTTTGCGGGTTCAGAGTTGAGACCAAGGTGGTCAGCCCATCG
TAGCCG-----TTACACGTCTCAGAGCCCCGATCATCATAGTTGCTTCCATCTCAGGGCTCAGATCCTTGCAGACCCAAT
GAAAAG---------------------TGCCTGCCTGCCTTGCCTTGCCGTAGCAGCCAGCCTGCGTGCCCGCATCCGCG
CTCTCGGCCGGCCAATGGCAGCCGTGGCGAACTGGACCACGCAAACTCCCCATGCCGCCGCCGCGCCGTGATAACGACAG
GGCCG---GCCAATAATAGAGGAGCTTGACGATCAGAGTTCACGGTCGCACGGCGCGGCGGCGAAGCATTGGGAGGCAGC
CACATCAGGGCGGTGAGAGCGAGACGCCG--AGACACCTGTTGCTGTTATCCTGC--ACCTGGACCGAGCGACGGACGTC
GTCTTCTGCACGACTGCACCCACGACCGTCCTCGCTTGAAGTTTTCTGATCTACTAATACGTGATGGGCTTGGACTTCTT
CGGTGCAGTTTTCATCTGTAGTTCACAGTCCAGATGCAGGAAAGGGACCTCCACTGAGGACGATGGTCTCACTCTGGCGT
GTGATGCGGACCGGCCACCTAACCTGACGGCAAAAGAAGGGCTCGGAGAAGTCA
>chr5D_218
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CAGGCTGAAACTAAGCCAACTA
--AAAGAAATGCTGAAACTAGCGAATGCGAACGTACGTTGGTTGCCTACTGGTAGCAACACGCCAGACGTGTGATTCGAA
GGAATCCGAGACCGCAGCTAGAGATCTCCCTGCAAGCACCAAAACAGCGCCATCGGAACCCGAATCCCACACACGATTGT
TTTCTCAGTCACACCC----CACGCACGCACGCAAGCTCCTTCGATCCGAAGACACGCTACTGCAGAG---AGAAACACG
CCTCGCCGTGGCGCGCGCGCACGA----CGGCGCATTCCCAGGGACAGAAAAGAACAAGCCCCCCGCCTTCCAATTCCGT
CCGCATCGGCCGCGCCGAGGCGGCGGGGGAGGCACGTACC---CC--TCCCCTGTCCGCATGGCCG------------GT
GCGTGCGCGCACCGGAGATCGCCCGAGGTTTTCTGTAC--------GTCCTCCATGGCCGGGACCAGGGCATCGGTGCAA
GCGCGCGCGCGGGGGCGACAGGCCGCGGATTAAGAAACGGGAAAGCGCACACA-CAGCAGTTTGATATTGGGCGCGTCAG
ACGGTGCCGGGTTTGAATATGCGGCAGCTCCCTTTGACCAGCATCGCTAGCTGTGTGCGGTGGAGCTGAGC-----TGAT
CAGTGTGGTGTGGATGGATCTAATCTGCCTCCTTGGCATATATAAAACCCCTGCACTGTCACCTAAACCTCTCCTTTCCC
CTCTGCTCGTCCGGTTCAGAGGTGCCAGCAGGTAGCTCTTTGTTGCCAAGTAGAGGAGACCATGAGGCGCGCAGGGAGCC
TTCTTCTCCTGCTGCTTCTGCTCTCCCTGTCTGCCTCCACCGCCGAAGCAAACAACAAGGTCGGTATAC------AATTT
CGCAGTAACTTCTTGTC--------CACGGCACGCTCACACCGCGTGCAGGTGGCGCTGTCAGTGGCAGTGAATGCCAGC
AATGGCGGAGTAGTGCTGATACCTTGCTTCTCGGTCGTGAAAATGCAGGGGAGCTTCGGCGACGACGCGGCACCCTTGAC
CGGCCGGAGATGGCACCTGAGAGGACGGCGGGCAATGGCGGACCGAGGGCACGGAGAGGCGAGGAGGGATGAGGCCGTGG
GAGCCAGGAACACAGGTGCAAACCCTGCCCGTGCCCGCGGAGGGAAGAAAACCGTAGAGGTCACCGTTGTCGGGTTAGGC
GGTGAACGTGCCGGGCAAAGGAGGAGTGGCGGCGGCAGGCGCGAATTTGACGGCCAAGTGCCGCTCCATTCCGATTACCG
CACTCCCAGAGTTCATCCGCCAAAGAATAACTGAGGCGCGGCAAAAAGGCAAAGGCTTCTTCTTGGTTCTTGCCACTGAT
TGATTG---CTGCTAGTGGTACAGTAGTGGTAGTTCTATTTTTTCACTCCTGAAGTAAAAAGTACAGTGC----CAGTGC
TCCTCGTCAGTTAAACAAGCTGGTGTTCTTTACTTGTGCTGTTAAGATTCTTGTCAAATCTGCCACTCCAGCACCCAAAC
TTGAACCTGTAATTAGTGTACTGCAAATGGGCCGCGTAGAGAAGGGCAATTAGTTAGCTGTACTGTTTTT----TGTCTG
ACAGTGAACCACTGGACCCTGAATGATGAACTGATACGTGCCATTTCTGTTGTTGCAGGAGCAAATCAAGAAGCAGGTCA
TGGGTCTGCTGAATTTGTACATGATGAGGCAAGTGCAGCAGCCGCACGCTTTACATGA-TTCAGCATCACAGGCATTATT
TGCACGGCACATGGCTGGCCGCTGGCCACATCACAATCGACATACAACTTCGATTCCTACCATGTACTGATGGTCGCGCT
TTCATTTC------------------------------------------CAGGGAGCAACCGGCCATCGTCATA---AC
CACGGCGGCGACGCGGCCGCCATGGCGTCAGACATGCTGAGGATGGACTACTCCGTCTCCGTGGACGTCCACAGCCGGCG
GCCCATCAACAACGACGCTCCGTTGTATGAGCTCGCGGACGAGAAGCCTTAGCTAGATGCCGGTCCACACGCGTGAGAAG
ATGCGACTCCTATTGATAT-----AGACACAGATGGTGTTAGGC-------------------------TAGCTAGCACA
TGGTTAGCTTAGC---TAAGTAGGGAGGGACCCTCCGGGCCGCACGTAGAGCCCATTTCTGAACCTCGATCGATCAATGG
AACGGATCGATCGAGGTGAGTTGGATGAGCAGTTTTGGTTGCGCCGTGCTTGGAGGGGTAGTGACGTCTGTAA----TCT
GTCAGCAGCAGCATCTCTGAAGCTGCAGAGAATAGAACTCATGATGCTACTTCAGGTTTCAGCACGTGGCTGTGGCAAGC
AGTATGCGCTCTCCTTCCTCGCCGTAAAGAAATAAATGCTTTGCGGGTTCAGAGTTGAGACCAAGGTGGTCAGCCCATCG
CAGCTG-----TTACACGTATCCGAGCTCCGATCATCATAGTTGCTTCCATCTCAGGGCTCAGATCCTTCCAGACCCAAC
GAAAAGAGGAAGCTAGCA---------TGCCTGCCTGCCTTGCCTTGCCGTAGCAGCCAGCCAGCGTGCCCGCATCTGCG
CTCTCGGCCGGCCAATAGCAGCCGTGGCGAACCGGACCACGCCAACCCCCCATGCCGCCGCCGCGCCGTGACAGCGACAG
GGCCG---GCCAATAATAGAGGAACGGGGCGATCGGAGTAGACGATCGCACGGCA-----GCGAAGCATTGGGAGGCAGC
CACATCAGGGTGGTGAGAGCGAGACGCCG--GGACACCTGTTGCTGTTATCCTGTATACCTGGACCGAGCGACGGACGTC
GTCTTCTGCACGACTGCACGCACGACCATGCTCGCTTGAAGTTTTCTGATCCAG---TACGTGATGGGCTTGGACTTCTT
CCGTCTAGTTTTTATCTGTAGTTCACAGTCCAGATGCAGGAAAGCGACCTCCACTGAAGAGGACGGTCTCACTCTGCCGT
GTGACACGGACCGGCCACCTAACCTGACGAGAAAAGAAGGACTCGGAGAAGTCA
>SNPs
SSSSS-----S------SS--S-------------S--S-------S--S------------------------------
S----SS-------S------------S------S-------------S---SSSS--SSS-SSS-SSS-S-S-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S----SS--------------SS-SS--S-
SS---S---S--------------------------------S--S---SS-S------S--------S-----------
---------------------S--------S-----S--------------------------S----------------
------------------------------------S-------------------------------------------
-------------S------------------------------------------------------------------
--------------------------S------------SSSS----------------------------SSSS-----
--------------------------------S-------------S-------------------S-------------
------------S-------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-------------------------------------------S------------------------------------
---S-------------------------------------------------S-------------S------------
-------------------------------------------------------------S----SSSSSSSSS--S--
----S---------------------------------------------------S-----------------------
------------------------S---------S---------------------------------------------
-------S-----------------------S----------S-------------S---------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
------------------------------------S--------S----S---------S-SS-----------S----
------S--S---------------------------------------------------S----------S-------
--------------------------------S----S------------------------------------------
-------------------------------------S--S-------------------------S-------------
-S-----------------------------------S--------------------S--S-S---SS---S------S
-----S-S-------------------------------------S-------------------------------S--
------------------S-------S-SS----S---------S-----------------------------------
--S---------------S----------------------------------------------------------S--
----------------------------------------------------S------------S--------------
---------SSSS-S--SSSSSSS--------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
-----------SSSSS----S----------S------------------------SS-S--S-----------SS-SSS
--------------------------------------------------S----S------S-----------------
----------S----------------------SS---S------S----------------------------------
--------SSSSSSSSSSSS-------------------S----S-----------S---S---S---S-----------
------SSSSS-------------------S------------------S---SS------S--------------S---
----S------------SSSSSSSSSS-----------------------------------------------------
-----------------------------------------------------------------------------S--
---S-SSS---------------------------------------S--------------------------------
--------------S----------S--SSS-----------------------------------------S-------
--------------------------------------------------------------------------------
-----------------------------------------------------S---S--S----S--------------
------------------------------------------SS----------
>forward_145
--------------------------------------------------------------------------------
---------------------------------------------CCACGGATGTATAAGGCCCC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1512
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GGATTACCG
CACTCCCAGAG---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_157
--------------------------------------------------------------------------------
---------------------------------------------------------AAGGCCCCGGAATAAGCAAT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_1793
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AGCGTGGAGAAGGGCAATTA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_158
--------------------------------------------------------------------------------
----------------------------------------------------------AGGCCCCGGAATAAGCAATT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2099
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGAGCAAGGGATCAGCAGC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GGAGATCGCCCGAGGTTTTT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2382
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GGGGCCATTAGCTAGCACA
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
