>input_sequence_56686
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----------------------------------------------------ATGACCGGAGGGGATTCCATGGATGCGA
TCAGCCTGGACGAGTGGGAGCTCCTGCCTGACCTCGGGAGCTCCTTCTTCATGGAGGAGTGCGCTGCT---GGTGGTGGT
AAGGATCAGGATCAGCCCTTGTTTGGGTCCGGTTTGGTCGTGATCGACATGGGCCACTTCACCATCCACCCTGCATCTCA
CCCTTGTACCTACTATGATTGCATCCTAGATGAAGAAGAGGCCATGGAAGCACCGGTGCAAGCTGCCTCTACACAGCAGC
AGCATGACGTCGAATTTGAGGACATCGGCGTCGTGCAGGCCGAGCCGAGGCGAGTGGAGCTCACGATGATGGTGACCGAG
GTACTGGTCTCCGGTGCAGAAGAGGAGGAAGAGATGGCGAACACCCCTGTTGCCGAAGAGGAAGCTGGTGATGAGGACGA
GGTGATGGTGGAAGCGGCACCTGATCATCTACCTCATGAGGTGGAAGAAGGTGCGGAGAGAGACAGGGCAGGGATGGACG
CTGCTGGCTTCAGCGTCGGGAAACTGAGGGTGAACGGCGTCGGGGCGCTCTGCTCCTTCGGGGTCGCCGCTGCCACCTTG
TGCATCTTGGTGCTTGGCGGCAGGCCGCAGCATCAGCAGCAGCAGAGGAAGATTATGGTGCAAGATCAGAAGTCCCAGTT
CCAGATGTACGCCGATGATGAGGTTGATGATTCTTCCCTTGTGTTCTTGAATTAATTCACCACT----------TTAATC
TTGTCACTGTTCCCCTAACGATATGCTCTAACAATCACATAGCCTAC---TTAAACTTCATTTTTTACACTTATATATTA
GGTGCAAAAAGGAACA------AAAAAACATTTGATGAGTTCAGCAACTTTGGGTCATCA--------------------
TATCCAATTGGAATAGAATTTGATCGTGCTTCTTTTTAAAGATTAGAACCTTCTTTCTAGTACACCACTGTATATTTTAT
CAGGCCAAAGCACTCGAGAATAGGGAGGAAATGGCCCACTGCACCTGACGATTTGATCTTCTTTCTGTCTGAAGCATGGA
ATCTTGCAATAGATAGTGAGCCTAAAGCACCGAAGAATCTCATTTAGGGGT-G-AAAAAATGGCCTGCTGTTTCCTGACG
GTTTTGCTCGCT---------CTGCAGAGAATTCATCGTGCCGTGGAGCAGGCGTCCAGGCTGAACCAGGCCGTGTCGTC
GGTGATGGGTGGCGCATCCACCA---GGGCGACCGTGTCGTTCGGCGGCCACTACAGCGGGTTCTGA-------------
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--------
>chr5B_1_TraesCS5B01G465300
CCCATTTCATTTTCGTTCCTCCCAGTTACATTGTCCTGTGCACAGTTACCCATCGCTGTCTCAGGTCACAGTCTCAACTT
TTCTGAGTTATATTTCTGCAGAACCTTCTAAACACGCGTCTCGATCTCCTCTGCCCTCCGTGCTCAGCTGGTGTGTGT--
CTCTATCCATCTTTACTCCCAGTTGATTCCGTTTATCAGTTCTGTTGTTTATGATCT-ACCGCGTAATAACTTTGACCCT
ATCCATTATGTTACTTAGTGTGCAGTTCTGTCTGAAAGCATGC-TTTTTATACGCAACT---TGATTTTGAAGATGACAT
TCATCGAAATCCCTTTCGGATTTGGTGGCATTGACATCATGATCATTGATAGTAACTAAGAGGACATATTTGATAATCTC
AAAAAAAAAAAAGAAGAGAGAGGACATATTTGATTACAGCTTGCTGTGTCGTACAAGTAAAATTGCCAAGTAACGCTGCG
CTGGTG-------CTTGGGGTTATTATAGAATTGTGGATGAGTTTGCCAGTCGGACGATTTGACTGCGCCGACATTACAT
CCTAAACCTGTTCTATAATGA-TA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TTTTTTCACCACCCCCCGTATGAATCACTTTCTCA
TCGTAGATTGTTTGCAAGTAATTAATTGATATTGCAGGAAAATATGGCAGCTGGAAAGAATTGA---GTAGGAAAGAAGG
AAGGAAGGAGCTAGTC------CCCATTGGTAGGCCCGGAAGAGCACTTTCAGCTTTGTCACTTAGCAGCAAGGCAAGGC
ACA--CACACAGGATCTCCTTAAATT-------------------------------GATTTGCCATCTCCCTTGGTGCA
ACATATTGTTCCCACTG----CCCCACTAGCATCCTCAGCTGCTGTTTCCCTCCTGAGAAAAGAGAAAGTATCCTTCCAA
GCCACCACTTGCTTTGATTCTTGGGGAGCATCCGTTCCATAGCATCCTCATAGCTGCCTGCAAGCAGGTTTGAGCGGCTA
GCTATAAGAACTCCCTGATCGCATCCGCTCTTGTTTCTT----------GCGATGACCGGAGGGGATTCCATGGATGCGA
TCAGCCTGGACGAGTGGGAGCTCCTGCCTGACCTCGGGAGCTCCTTCTTCATGGAGGAGTGCGCTGCT---GGTGGTGGT
AAGGATCAGGATCAGCCCTTGTTTGGGTCCGGTTTGGTCGTGATCGACATGGGCCACTTCACCATCCACCCTGCATCTCA
CCCTTGTACCTACTATGATTGCATCCTAGATGAAGAAGAGGCCATGGAAGCACCGGTGCAAGCTGCCTCTACACAGCAGC
AGCATGACGTCGAATTTGAGGACATCGGCGTCGTGCAGGCCGAGCCGAGGCGAGTGGAGCTCACGATGATGGTGACCGAG
GTACTGGTCTCCGGTGCAGAAGAGGAGGAAGAGATGGCGAACACCCCTGTTGCCGAAGAGGAAGCTGGTGATGAGGACGA
GGTGATGGTGGAAGCGGCACCTGATCATCTACCTCATGAGGTGGAAGAAGGTGCGGAGAGAGACAGGGCAGGGATGGACG
CTGCTGGCTTCAGCGTCGGGAAACTGAGGGTGAACGGCGTCGGGGCGCTCTGCTCCTTCGGGGTCGCCGCTGCCACCTTG
TGCATCTTGGTGCTTGGCGGCAGGCCGCAGCATCAGCAGCAGCAGAGGAAGATTATGGTGCAAGATCAGAAGTCCCAGTT
CCAGATGTACGCCGATGATGAGGTTGATGATTCTTCCCTTGTGTTCTTGAATTAATTCACCACT----------TTAATC
TTGTCACTGTTCCCCTAACGATATGCTCTAACAATCACATAGCCTAC---TTAAACTTCATTTTTTACACTTATATATTA
GGTGCAAAAAGGAACA------AAAAAACATTTGATGAGTTCAGCAACTTTGGGTCATCA--------------------
TATCCAATTGGAATAGAATTTGATCGTGCTTCTTTTTAAAGATTAGAACCTTCTTTCTAGTACACCACTGTATATTTTAT
CAGGCCAAAGCACTCGAGAATAGGGAGGAAATGGCCCACTGCACCTGACGATTTGATCTTCTTTCTGTCTGAAGCATGGA
ATCTTGCAATAGATAGTGAGCCTAAAGCACCGAAGAATCTCATTTAGGGGT-G-AAAAAATGGCCTGCTGTTTCCTGACG
GTTTTGCTCGCT---------CTGCAGAGAATTCATCGTGCCGTGGAGCAGGCGTCCAGGCTGAACCAGGCCGTGTCGTC
GGTGATGGGTGGCGCATCCACCA---GGGCGACCGTGTCGTTCGGCGGCCACTACAGCGGGTTCTGACGTGCC---AGAA
GCTTCTAGAATCTGTCGACGCATCCATGACATCCTAGTGTTAGGCAT----ATTGATATTGAGATTCTTTATTTACA---
-TTGGTCAGGGCCCCGTAGGCCGTAGCCTGTATGTGTGC-ATGTATATATGCTTGT------------------------
---------------CTGTCATGTACTCCGTATTTCCTACCAGCGGATGTGAATAGCATTATTTCGGGTTGAATTTTTTC
CCGCGAAATTACTTCATCCACTAGGAGATCCGCTCCGAT---------------------------TGCTCTGTAGAAAT
GCAGTCAACGGTGTTT-TTTTGTTTCCGCGATAGCAAAGAAGATTCAAACGCACGTCACTGGAACGCACGCGGTAACCAC
------------------------------------------------------TTGGGCCGCCGGCCGTGTGTCCGTTG
GGTGAATCTGGCCGGCGTGCGCGACCGTCGGTTCGTCGGCTAGCGCCACCGTG---------------------------
----------------------------------GGTATATGCAGTCGGTCGGAGGTCCATCTTCCCGTCGCGTCGCCGT
GCGCTGTGCGTGCTGTTCGCTGGACCGATCGCCCGGCCCGGCACGTCGCTGCGTGTGAATGGTGGTTTTCCTGCCTCTTT
CCCATGATCAACGTTGTTTGGAAGAACACGTCGAGATTCAGTCGTCC------------------GCGCCGACAAAGGAC
GATGGGAAGAGGCCGT-CCGTGCCGGAGCTCTGCTCTGTGACAGCGATGGACATGCATCCGGAGGTAGAGAAGGACGACG
GGTGATTTGTTTCTGTCCAGGGAAGAATCCAGGAAGACGAGCTTGAGTGACAATGCTGCTCGTCTGATGCCGACGT----
--TTTTTTTGGAGGGGTGCCGACGG--TCTGATTGGCACTCTCTGGCCCTCCCGTTCTTCATATTGGGCCGCATAGTAGG
CTTCCGCCGACTCACCCATTCCTCCTCAGAGCTATATCTCGCCCGTACCGAGAGATCCCTCAGTCCCACCTTTGGCCTGA
GGTTAGCAGTTTTTGGGAAGTTTAACCGTTTCCGTCCAGTTTAAGAACCTACCTTGCGTTTTTTTTTCTTTGTGCGTTTC
TTATCGGC
>chr5D_1
CCCATTTCATATTCTTTTCTCCCAGTTACATTGTCCTGTGCATGGTTATCCATCACTGTCTCGGGTCACAATCTCAACTT
TTCCGAGTTATATTTCTGCAGAACCTTCTAAACACGCGTCTCGATCTCCTCTGCCCTCCGTGCTCAGCTGGTGCGTGT--
CTCTATCCATCTTTCCTTCCTGTTGTTTCCGTTTATCAGTTCCTTTGTTTATGATCTAACCGCGTAATAACTTTGACCCT
ATCCATTATGTTACTTAGTGTGCAGTTCTCTCTGAAAGCATGC-TTTTTATATGCAACTCCTTGATTTTGAAGATGACGC
TCGTCGAAATCCCTTTCGGATTCGGTGGCATTGACATCATGACCCTTGACAGCAACTGAG--------------------
--------------------AGGACATATTTGATTACAGCTTGCTATGTTGTACAAGTAAGATCGCCAAGTAATGCTGCG
CTGGGG-------CTTGGGGTTATTTTAGAATTGTGGATGAGTTTGCCAGTCGGACGATTTGACTGCGCCGACATTATAT
CCTAAAGCTGTTCTATAATGA-TA--------------------------------------------------------
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---------------------------------------------TTTTTCACCACCCCCTTGTATAAATCACTTTCTCA
TTGTAGATTATTTGCAAGTAATTAATTGATCTTTGCAGAAAATACGGCAGCCGGAAAGAATTGA---GTAGGAAAGAAGG
AAGGAAGGAGCTAGTC------CACATTGGTAGGCCCGAAAGAACACTTTCAGCTTTGTCACTTAGCAGGAAGGCAAAGC
ACATACCCACAGGATCTCCTTAATTTTTTTTTTTGAGGGTAGGATCTCCTTAAATTGGGTTTGCCATCTCCCTTGGTGGA
ACTG---------ACTA----CCCCACTAGCATCTTCAGCTCTGCTTCCCCTCCTGAGAAAAGAGAAAGTATCCTTCCAA
GCCATCGCTTGCTTTGATTCTTGGGGAGCATCCGTTCCATAGCATCCTCATAGCTGCGTGCAAGCAGGTTTGAGCAGCTA
GCTATAAGAACTCCCTCATCGGATCGG-TCTTGTTTCTT----------GCCATGACCGGAGGGGATTCCATGGATGCGA
TCAGCCTGGACGAGTGGGAGCTCCTGCCTGACCTCGGGAGCTCCTTCTTCATGGAGGAGTGCACTGCT---GGTGGTGGT
AAGGATCAGGATCAGCTCCTGTTTGGGTCCGATCTGGTCGTGATCGACATGGGCCACTTCACCCTTGGCCCTGCATCTCA
CCCTTGTAC---CTATGATTGCATCCTAGATGAAGAAGAGGCCATGGGACCATCAGTGCAGGCTGCCTCTGCACAGCAGC
AGCATGGCGTCGAATTCGAGGACATGGGCGTCGTGCAGGCCGAGCCGAGGCGAGGGGAGCTCACGATGATGGTGACCGAG
GTGATGGTGTCCGGTGCAGAGGAGGAGGAAGAGATGGTGCACTCCCCTGTTGCCGAAGAGGAAGCTTCTGAGGAGGACGA
GGTGATGGTGGAAGCGGCACCTGATCATCTACCTCATGAGGTGGAAGAAGGTGCGGAGAGAGACAGGGCAGGGATGGACG
CTGCTGGCTTCAGCGTCGGGAAACTGAGGGTGAATGGCGTCGGGGCGCTCTGCTCGTTCGGGGTCGCCGCTGCCACCTTC
TGCATCTTGGTGCTTGGCGGCAGGCCGCAGCATCAGCAGCAGCAGAGGAAGATTATGGTGCAAGATCAGAAGTCCCAGTT
CCAGGTGTTCGCCGATGACGAGGTTGATCACTCTTTCCTTCTGGTCTTGAATTAATTCGCCACT----------TTAATC
TTCTCGCTGTTCCC-TAACCACATGCTCCAACAACT--ATAGCCTA-------------------TATACTTTGGTACAA
C-----------AACA------AAAAAACATTGGATGTGTTCAGCAACTTTGCATCATCATGCCCAATTGGAATAGAATT
TGATCA--------------------TGCTTCTTTCTAAAGATTAGAATCTTCTTTCTAGTACACTGCTGTATATTTTAT
CAGGCCAAAGCACTAGAGAATAGGGAGAAAACGGCCCACTGCACCTGATGATTTGATCTTCTTTCTGTCTGAAGCATGGA
ATCTTGCAATAGATT---AGCCTAACGCAGTGAAGAATTTCATTTTGGGGCGG-AAAAAATGGCCTAGTGTTTTCTGACG
GTTTTGCTTGTTTT-GATCTGCTGCAGAGAATTCATCGAGCCGTGGAGCAGGCGTCGAGGCTGAACCAGGCCGTGTCGTC
GGTGATGGGTGGCGCATCCACCA---GAGCGAAGGTGTCTTTCGGCGGCCACTACAACGGGTTTTGACGTGCC---AGAA
GCTTCTAGAATCCATCGACGCATCCATGACATCCTAGTGTTAGGCAT----ATTGATATTGAGATTCTTTATTTACA---
-TTGGTCAGGGCCCCGTAG-------CCTGTATGTCTGCAATGTATATATGCTTAATAGCTG-------GTAGATTGCAT
CAGTCCACTACTCCACTGTCATGTAC-----ATTTCCTACCAGCAGATGTGAATAGTATTATTTTGGGTTTGA-TTTTCT
CCGCGAAATTACTTGGCCTTCCCCTCCGATTATTGTACTGTACGACGAGACCACGGATGGTGAGGATGCTCTGTAGAAAT
GCAATCAACGGTGTTT-TTTT-TTTCTGCGATGACAAAGAAGATTCAAACGCACGTCACTGGAACGCACGCGGTAACCAC
GCGCTGGAATTGACTGCAGCTGTAGATACTACT--------------------------CCGCCGGCCAAGTGTCCGTTC
ACTGAATCCGGCCGGCGTGCGCGACCGTCGGTTCGTCGGCTAGCGCCAC-------------------------------
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--------
>chr5A_1
CCCATTTCATTTCCTTTTCTCCCAGTCACATTGTCCTGTGCACAGTTACCCATTGTTGTCTCGGGTTACAATCTCAACTT
TTCTGAGTTATATTTCTGCAGAACCTTCTAAACACGCGTCTCGATCTCCTCTGCCCTCCGTGTTCAGCTGGTGTGTGT--
CTCTATCCATCTTTACTTCCCGTTGATTCCGTTTATCAGTTCATTTGTTTATGATCTG-CCGCGTAATTACTTTGACCCT
ATCCATTATGTTACTTAGTGTGCAGTTATCTCTGAAAGCATGC-TTTTTATATGTATCT---TGATTTTGAAGAGGACGT
TCATCGGAATCCCTTTCGGATTCGGTGGCATTGACATCATG--CCCTGACAGCAACTGGC--------------------
--------------------GTGACATATTTGATTACAGTTTGCCTTGC----CAAGTAAGATTGCCAAGTAACGCTGCG
CTGGTG-------CTTGGGGTTATTTTAGAATTGTGGATGAGTTTGCCAGTCGGACGATTTGACTGCGCCGACATTATAT
CCTAAAGCTGTTCTATAATGA-TA--------------------------------------------------------
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---------------------------------------------TTTTTCACCACCTCCTTGTATGAATCACTTTCTCA
TTGTAGATTGTTTGCAAGTATAA---TGATATTGCAGGAAAATACGGCAGCCGGAAAGAATTGA---GTAGGAAAGAAGG
AAGGGAGGAGCTAGTC------CCCATTGGTAGGCCCGAAAGAACACTTTCAGCTTTGTCACTTAGCAGGAAGGCAAAGC
AC----------------CTTAAATT-------------------------------GGTTTGCCATCTCCCTTGGTGCA
ACATGTACTAGTTCCCACTACCCCTTCTAGCTTCTTCAGGTGCTGTTCCCCTCCAGAGAAAGAAGAAAGTATCCTTCCAA
GCCACCACTTGCTTTGATTCTTGGGGAGCATCCATTCCATAGCATCCTCATAGCCGCCTGCAAGCAGATCTGAGC----A
GCTATAATAACTCCCTGATCGGATCCGCTCTCGTTCCTTGCGCTGATTTGCGATGACCGGAGGGGATTCCATGGATGCAA
TCAGCCTGGATGACTGGGAGCTCCTGCCTGACCTCGGGAGCTCCTTCTTCCTGGAGGAGTGCGCTGCTGGTGGTGGTGGT
AAGGATCAGGATCAGCTCTTGTTTGGGTCCGGTTTGGTCGTGATCGACATGGGCCACTTCACCCTCCACCCTGCATCTCA
CCCCTCTAC---CTATGATTGCATCCTAGATGAAGAAGATGCCATGGGACCATCAGCGCAAGCTGCCTCTGCACGGCAGC
AGCATGATGTCGAGTTCGAGGACATCGGCGTCGTGCAGGCCGAGCCGAGGCAAGGGGAGCTCGCGATGATGGTGACCGAG
GTGATGGTCTCCGGTGCAGAAGAGGAGGAAGAGATGGTGAACTCCCCTGTTGCCGAAGAGGAAGCTGGTGAGGAGGACGA
GGTGATGGTGGAAGCAGCACCTGATCATCTACCCCATGAGGTGGAAGAAGGTGCGGAGAGAGACAGGGCAGGGATGGACG
CTGCTGGCTTCAGCGTCGGGAAACTGAGGGTGAACGGCGTCGGGGCGCTCTGCTCCTTCGGGGTCGCCGCTGCCACCTTC
TGCATCCTGGTGCTTGGCGGCAGGCCGCAGCAGCAGAGGAA---------------GGTGCAGGACCACAAGTCCCAGTT
CCAGGTGTTCGCCGATGATGAGGTCGATCACTCTTTCCTTCTGTTCGTGAACTAAATTTCTTCACTTCTACTGATTGATC
TTCTCTTTGTTCCC-TAAAGGCATGCTCTAGCAAATTACTGCTATAGTTTTTAAACATCATTTATTATACTTGGGTCCAA
A-----------AAAGAAAAGGAAAAAACATTGGATGAGTTCAGCAACTCTGCATCATGA--------------------
TGATGA--------------------TGCTTCTTTTTAAAGATTAGAATCTTCTTTCTATAGACTATTGAAGAGGAA---
---------------------AGGGTGAAAATGACCCACTGCTCCTGATGATCTGATTTCCTTTATAGCTGGTTCTTGGA
ATCTTGCAATAGATT---AGCCTAAAGCACGGGGGAATTTCATTTAGGGGT-GAAAAAAATGGCCTGGTGTTTTCTGACA
GTTTTGCTTGTGTTTGATCTGCTGCAGAGGATCCATCGTGCCGTGGAGCAGGCGTCCAGGCTGAACCAGGCCGTGTCGTC
GGTCATGGGGGGCGCGTCCACCAGGGGGGCGACGGTGTCGTTCGGCGGCCACTACACCGGGTTTTGACGTGCTACGAGAA
GCTTCTAGAATCCGTCGACGCATCCACGATCTAATAGTATTAGACATATTGATTGATATTGAGATTCTTTATTTACAAAC
ATTGGCCAGGGCCCCGTAG-------CCTGCAC----GC-ATGTACATATGCTTCTACTCAGCTGGTACGTAGATAGCAT
GAG--------TCCACTGTCATGTAC-----ATTTCCTACCAGCAGATGTGAATA---TTATTCTGGGTTTGA-TTTTCT
CCGCGAAATTACTTCGCCTTCCCCTCCGATTATCGTACTGTACGACGAGGCAATGGATGGTGAGGATGCTCTGTGGAAAT
GCAACCAACGGCTCGTGTTTT-TTTATGCGATGACAAAGAGGATTCAAACGCACGTCACTGGAACGCACGCGGTAACCAC
GCGCTGGAACTGACCGCAGCTGCAGATACTACTTGGAAGCCACCGCCGGGCCACTTGGCCCGCCGGCCGAGTGTCCGTTC
ACTGAATCCGGCCGGCGTGCGCGACCGTCGGTTCGTCGGCTAGCGGTGCGGCGAGACACCCTGACATGGACGTTGATTCC
TTACCTTTCCTCCTGTTCCCGCGGGGCAGGCAACGGCATATGCAGTTGCCCGGAGG-------TCCCGTCGCTTCGCCGT
GCGCTG--------------------GATCGTCTGGCCCGGCACGTCGCTGTATCTGACTGGCGATTTTGCTTCCTCTCT
CACATGATCAAACTTGTCCGGAAGAACACGTCGAGATTCAGTCGTCTACGGGGGGTAAAAATCTGGCGTCGACATCGGAT
GATGGGAAGAGGCCGGGCCGTGCCGGAGCTCTGCTCTGTGACAGCGATGCACATACATCCGGAGGAAGGGAAGGACGACG
GGTGATTTGTTTCTGTCCAGGGAAGAATCCAGGAAGGCGGGTTTGAGTGACAGTGCTGCTCGTCTGATGCCGACAGGTTT
TCTTTTTTTGAGCAACTGCCGACGGTCTCTGATTGGCACTCCCTGGCCC-------------------------------
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--------
>chr5A_1
CCCATTTCATATTCTTTTCTCCCAGTTACATTGTCCTGTGCACAGTTACCCATTGCTGTCTCGGGTCACAGTCTCAACTT
TTCTGAGTTATATTTCTGCAGAACCTTCTAAACATGCGTCTCGATCCCCTCTGCCCTCCGTGCTCAGCTGGTGTGTGT--
CTCTATCCATCTTTCCTTCATGTTGTTTCCATTTATCAGTTCCTTTGTTTATGATCTA-CCGCGTTATAACTTTGACCCT
ATCCATTATGTTACTTAGTGTGCGGTTCTCTCTGAAAGCATGC-TTTTTATATGCAACTCCTTGATTTTGAAGACGACGC
TCGTCGAAATCCCTTTCGGATTAGGTGGCATTAACATCATGATCCCTGACATCAACTGAG--------------------
--------------------AGGACATATTTGATTACAGTTTGTTATGCCGTACAAGTAAGATCGCCAAGTAATGCTGCG
CTGGTGGCTGGTGCTTGGGATTACTTTAGAATTGTTGAAGGGTTTGCCAGTCGGATGATTTGACTGCGCCGACATTATAT
CCTAAAGATGTCCTATAATGA-TACTCCCTCCGTTTCTAAATATAGGGTGTATAGTTTTTGGCACGGAAATTAAAGAACA
TACATGGAGGGAAAATTTCACAAGTTTTGGGCAAGATTTCACCTGACTAATTGACATGAGAAAATAGAGGAGGTTGCTTG
ATATAAGGAAATGTAATCAAATCCCTAAAAGAATTATCCAAACAAGTGGTGCAACACAATGCACCTTATATTTTGGGTTT
TTTCTCAAAAAACTATACACCTTATATCAAGGAACAGAGGGAGTATATTTT----ACCCCCTGCATAAATCACTTTCTCA
TTGTAGATTGCCTGTAGGTAATTAATTGATATTGCAGGAAAATATGGAAGCTGGAAAGAATTGATGAGTAAGAAGTTAGC
AAGGAACTAGGAAGGAACAAGTCCCATTGGTAGGCCCGAAAGCACACTTTCAGCTTTGTCACTTAGCAGGAAGGCAAAGC
ACATACACGCAGGATCTCCTTAA---------------------------------------------------------
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>chr2D_1
CCCATTTCATATTCTTTTCTCCCAGTTACATTGTCCTGTGCACAGTTACCCATTGCTGTCTCGGGTCATAGTCTCAACTT
TTCTGAGTTATATTTCTGCAGAACCTTCTAAACACGCGTCTCGATCCCCTCTGCCCTCCGTGCTCAGCTGGTGTGTGT--
CTCTATCCATCTTTCCTTCATGTTGTTTCCATTTATCAGTTCCTTTGTTTATGATCTA-CCGCGTTATAACTTTGACCCT
ATCCATTATCTTACTTAGTGTGCAGTTCTATCTGAAAGCATGC-TTTTTATATGCAACTCCTTGATTTTGAAGACGACGC
TCATCGAAATTCCTTTCGGATTAGGTGGCATTGACATCATGATCCCTGACATCAACTGAG--------------------
--------------------AGGACATATTTGATTATAGTTTGCTATGTCGTACAAGTAAGATCGC-AAGTAATGCTGCG
CTGGTGGCTGGTGCTTGGGATTACTTTAGAATTGTTGAGGGGTTTGCCAGTCGGATGATTTGACTGCTCCGACATTATAT
CCTAAAGATGTTCTATAATGA-TA--------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------TATTTT----A-CCCCTGCATAAATCACTTTCTCA
TTGTAGATTGCCTGCAGGTAATTAATTGATATTGTAGGAAAATATGGCAGCTGGAAAGAATTGACGAGTAAGAAGAAAGC
AAGGAAATAGGAAGGAACAAGTCCCATTGGTAGGTCCGAAAGCACACTTTCAGCTTTGTCACTTAGCAGGAAGGCAAAGC
ACATACACGCAGGATCTCCTTAA---------------------------------------------------------
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>chr1A_1
CCCATTTCATATTCTTTTCTCCCAGTTACATTGTCCTATGCACAGTTACCCATTGCTGTCTCGGGTCACAGTCTCAACTT
TTCAGAGTTATATTTCTGCAGAACCTTCTAAACACGCGTCTCGATCCCCTCTGCCCTCCGTGCTCAGCTGGTGTGTGT--
CTCTATCCATCTTTCCTTCATGTTGTTTCCATTTATCAGTTCCTTTGTTTATGATCTA-CCGTGTTATAACTTTGACCCT
ATCCATTATGTTACTTAGTGTGCAGTTCTCTCTGAAACCATGC-TTTTTATATGCAACTCCTTGATTTTGAAGACGACGC
TTGTCGAAATCCCTTTCGGATTAGGTGGCATTGACATCATGATCCCTGACATGAACTGAG--------------------
--------------------AGGACATATTTGATTACAGTTTGCTATGCCGTACAAGTAAGATCGCCAAGTAATGCTGCG
CTGGTGGCTGGTGCTTGGGATTACTTTAGAATTGTTGAGGGGTTTGCCAGTCGGATGATTTGACTGCGCCAACATTATAT
CCTAAAGATGTTCTATAATGAGTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TATTTT----ACCCCTTGCATAAATCACTTTCTCA
TTGTAGATTGCCTGTAGGTAATTAATTGATATTGCAGGAAAATATGGAAGCTGGAAAGAATTGATGAGTAAGAAGTTAGC
AAGGAACTAGGAAGGAACAAGTCCCATTGGTAGGCCCGAAAGCACACTTTCAGCTTTGTCACTTAGCAGGAAGGCAAAGC
ACATACACGCAGGATCTCCTTAA---------------------------------------------------------
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--------
>chr3D_1
CCCATTTCATATTCTTTTCTCCCAGTTACGTTGTCCTGTGCACAGTTACCCATTGCTGTCTCGGGTCACAGTCTCAACTT
TTCTGAGTTATATTTCTGCAGAACCTTCTAAACACGCGTCTCTAT-CCCCCCGCCCTCCGTGCTCAGTTGGTGTGTGTGT
CTCTATCCATCTTTCCTTCATGTTGTTTCCATTTATCAGTTCCTTTGTTTATGATCTA-CCGCGTTATAACTTTGACCCT
ATCCATTATGTTACTTGGTGTGCAGTTCTCTCTGAAAGCATGCTTTTTTATATGCAACTCCTTGATTTTGAAGACGACGC
TCGTCGAAATCCCTTTCGGATTAGGTGGCATTGACATCATGATCCCTGACATCAACTGAG--------------------
--------------------AGGACATATTTGATTACAGTTTGCTATGCCGTACAAGTAAGATCGCCAAGTAATGCTGCG
CTGGTGGCTGGTGCTTGGGATTACTTTAGAATTGTTGAGGGGTTTGCCAGTCGGATGATTTGACTGCGCCGACATTATAT
CCTAAAGATGTTCTATAATGA-TA--------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------TATTTT----ACCCCCTGCATAAATCACTTTCTCA
TTGTAGATTGCCTGCAGGTAATTAATTGATATTGCAGGAAAATATGGCAGTTGAAAATAATTGATGAGTAGGAAGGAAGC
AAGGAACTAGGAAGGAACAAGTCCCATTGGTAGGCCCAAAAGCACACTTTCAGCTTTGTCACTTAGCAGGAAGGCAAAGC
ACATACACGCAGGATCTCCTTAA---------------------------------------------------------
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>SNPs
--------------S--S--------------------------------------------S-----------------
--------------------------------------------------------------------------------
-----------------S--S---------------------SS------------------------------------
-----------------------------S----------------------S-------------------------S-
----------------------S---------------------S----S--S----S--SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS-------------------------S--------------S-------------------
-------------------------S---------------------------------------------------S--
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------SS-S------S------------------
-S------------------------------------------------------------------------------
--------------------------------------S----S-------------------------S-------S--
----------------------------------------------------------S---------------------
----S-SS-SSSS---S-----------------S------------S--------------------------------
---------------------------------------------------------------------------S----
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
----------------S----------------------------------------------S----------------
---------SSS-----------------------------------S-S--S-S---------------S---------
----------------S-------------------------------------S-------------------------
--SS---------------------------------S----S----------------------------S--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----S---S-------------------S-S----S----S-----------------S---------------------
--S--S--------S------S------------SSSS--------S---------S------S---S----SSS--SS-
SSSSSSSSSSSS--------------------S-------------------SS--------------------------
-SSS--SSSSSSSSSSSSSSSSSSSS----------------------S----------------SS-------------
--------------S------------S--------------------S-------------------------------
--------------SSSS------------S-------S----------------------------S-----S------
--------S-S---------------------------------------------------------------------
---------------------------------S----------------------S------S----------------
------------S-------------------------------------------------------------------
-------------------SSSSSSS---------S------------------S-------------------------
--------------------------SSSSS-------------S-----------S-------S-----SS-S----SS
---------------SS-SS-SSSSSSSSSSSS-SSSS------------------------------------------
---S-----------------S----S-----SS----------------------------------------------
----------------------------------------------------------S----------S---------S
SS------S----------------------------------------S-S----------------------------
------------------------------------S---------S-SS------SSSSSSS---------S-------
------SSSSSSSSSSSSSSSSSSSS-----S-S-----------------SS-S---S---S-S----S--S-----S-
-S---------SS----SS---------------------------S---------------------S-----SS---S
---------------S---------------------------------S----S----------S--S-----------
------------------------------------S--S-S----------S---------------------SS----
----------SSSSSS-------------------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_1168
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----------------------------AGCATCCTCAGCTGCTGTTT--------------------------------
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>reverse_3429
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--------------------------------------------------------------------CCGACAAAGGAC
GATGGGAA------------------------------------------------------------------------
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--------
