>input_sequence_56662
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--------------------------------------------------ATGGCGTCATCGGAGGGACGTCG------T
CGTCGGCGGGGCAAAAAGAGCAAGGCCAAA---AAGAAGAAGAAAGAGGCCGGACCGACGATCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCATGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCGTCGGGAACCCCGGCTTCTTCGCCCGCTTCGGCCCGGTCCACGCGCAGGCGCCGTACGTCGGCGACTACCAC
ACCGTGCAGGGGGGACAACCCCTCTTCGTCCCCTCCTCGCCGGTCGTCGTCGACCGCAGCCGCTTCTCCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGAGATCGCCGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACTCTCGCTGTGTTCGCCACTACCCCGACCTTATGGTATGCGAGCCGCTCGCCGGACTCTACCAGAGAATC
CTCTGGCCGGAGGATCTGGACGGAATTGGCCGCCTTGGCGTGTTCCTGCTTAACGGCGACGACGCGGGCCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTAGCGGCCGTCGACGAAACCGTGGCATGTGTGTTCTCCACGGGCAGCGAGGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCTCTTGACGAGACCACGGCGGAGTTCTCGATCGC
CGCATTCCCGGAGAACGTCTGGGGGCCGTCCCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCACGCTGCGCG
TCATCCGCCTCATAGGCAACGACCTCAAGGTCTTCGCCAAGCGGCATGCGGGCAGT---GACGAGGATGAGTGGTTGCTG
GAGATGCACCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCGAGGAGCACTTTTTCCGGCAACAAACCATGAT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAATCGTGGTTGTTCTCTGTTGAGCTTGATACAATGC
GAGTAGAGAGCAAACACGAGAGAAACAAGTACGCCGGAGAGGCGTACCCGTGCAAGTTGCCATGGCCGCCAGCCTTGGCT
GATCATGGCAGGGAAAGGAGG---TGA-----------------------------------------------------
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>chr1B_1_TraesCS1B01G268100
GTATTCGAGATCTTGGTCTCCTGGTAACTTTGCTGATGTTCGAGCTATTTCGAATGGTCTGAATGGCCAGGCTAGGAGAC
TGTTTTGGACCGGGATGGGTGCTCTCTGCTGGGCTCTTTGGACTACTCAGAACAAATTTACTATTGAGGACGTCTTCCCT
AACAAGCCTGCTGATGTTTTGTTCAAAATGTCTATATTCTTGCAACAGTGGAAATTATTGACTAAGGAGGAGGATCATGA
CGGGCTGGAGAGGCTGATCACCAAAGTTCGGGTGTTTGCCAATTTGCTATCCTTCCCAACCGATGATGTCTCGTCGTAGT
TGTCGATTCTTTTGTCGTGTAGGTGGTGGCCTGCGTGCCCCTTTATCTCATTTGGGCCTGCGTGCCACCTTAAAACTCTT
GTGTGT-------CT------TCTCTCTGGTTTGGTTGTGAGAC-TTGA-T--TGGTGTGGATCTTTGTTGATCCTATAC
TCG-TTCGTATGGCTTTATCTATAAAGTCGGGCAACCGCTTTTTTTCTAAAAAAACAAAATATGTTTGACGTTGTCCTCA
ACAGAAAATGGCTGGTCCTGCAGGGCGAGCCTCGGCCGTCGGTCCGACGTCCATAGCCTGTGTTGCACTGCAAGCCACAC
AAATACTGCACGAAATAGTAATTCATGCAACTTGTGCATAGCAAAAATGGAAACGAAAAAAAGAGGACTCTGCTTTT---
---TCCCTGGCCTCAACATCTATCCG-TTGGCTTGTTGATGACATGGACGTGCAAGGAGCCAAGGACTGCGGGTGCAAGG
ACGTGCAAGGACTGCGGGT----------------------GCTCGAATCTTTCAGCTGACACGTTTACGCGCGTCGATC
GCGCTGGAGTAGTTTACAACACGCCACACGCCATGGCGCGCGACTTGGAGGCCGCGGCACTCCTCGCC------------
-----------------------------GCTGTGGCGATCTTGTTTATCTAGAGCAGAATTTCGCGGCAGGCGGTCGTC
ACTCGTCAGCGCAGTGCGAGAGAGA--CGCCACTCCCCTTCCCTTCGCTAATGGCGTCATCGGAGGGACGTCG------T
CGTCGGCGGGGCAAAAAGAGCAAGGCCAAA---AAGAAGAAGAAAGAGGCCGGACCGACGATCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCATGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCGTCGGGAACCCCGGCTTCTTCGCCCGCTTCGGCCCGGTCCACGCGCAGGCGCCGTACGTCGGCGACTACCAC
ACCGTGCAGGGGGGACAACCCCTCTTCGTCCCCTCCTCGCCGGTCGTCGTCGACCGCAGCCGCTTCTCCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGAGATCGCCGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACTCTCGCTGTGTTCGCCACTACCCCGACCTTATGGTATGCGAGCCGCTCGCCGGACTCTACCAGAGAATC
CTCTGGCCGGAGGATCTGGACGGAATTGGCCGCCTTGGCGTGTTCCTGCTTAACGGCGACGACGCGGGCCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTAGCGGCCGTCGACGAAACCGTGGCATGTGTGTTCTCCACGGGCAGCGAGGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCTCTTGACGAGACCACGGCGGAGTTCTCGATCGC
CGCATTCCCGGAGAACGTCTGGGGGCCGTCCCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCACGCTGCGCG
TCATCCGCCTCATAGGCAACGACCTCAAGGTCTTCGCCAAGCGGCATGCGGGCAGT---GACGAGGATGAGTGGTTGCTG
GAGATGCACCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCGAGGAGCACTTTTTCCGGCAACAAACCATGAT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAATCGTGGTTGTTCTCTGTTGAGCTTGATACAATGC
GAGTAGAGAGCAAACACGAGAGAAACAAGTACGCCGGAGAGGCGTACCCGTGCAAGTTGCCATGGCCGCCAGCCTTGGCT
GATCATGGCAGGGAAAGGAGG---TGATGATGATGCCTGATTGTCATGGCTGCCGACTTTGT------------------
CTCATCA------TAGCAGAGAGGAGGTGATAACGT---CCCTGATCGTCTATCAAACTTTCAAAAGGTTATCCGTTTCG
GCGTATCTGGAACAGATTTGTACTATTTGTAGAAAAAAAAATCCGTACCGTGTTTTTTGCTTCACTCTGTTCTTGCGTGT
GCCTCTCTTGGACTCCTTCCTCATGCTCCCCCCGCCATTATATTGAACAGCGGCTAATTAGGGATTTGGAACAGAAAATG
TTTATAAATAATTCGTGCTTATTTTTTGACTGGACACTGTTTTGGGCCAGTCGATTTCTTATTGGGCTGAAACCCATTTC
GTATTGCCTGTTTATAGGCCGTGCTGCCTCTTTTTTCTGTTTGTAACTTTGTATGCATTTTTTGCTTCTCTTTTTTAGTC
G--GTTTATAGGGGTATATTCAGGATGTTGAATGAGTGTAAAATGTATACGTGCAATTACTATATAACATGTGTATAAAT
TGTATTAGAGTGGAAAAATTATACTACTATATGTTTATTCTCTATACTCCATCCGTTTCTTTTTAGTTCACATATAAGAT
CTGTCTTAAGTCAAGCGTAGTAAAGTTTGACTGAGATTGTTAGAAAAATATCAACATTTCATAATATAAAATTGACATCA
TTAGATGCATTATTGAATTAAATTTCATAATGTATATGTCTAGGATTGTAATGTTGATAATTTTGTATATAAATTTAGTC
AAACTTTAGGAAGTTTGACTTAAGATAAATGTTATATGCGAAGTAAAATGAAACGGAGGGAGTACATATTAAAAAGTGCA
ATGTTGTGCAGAAGTTTTTTAAATTGTTTATTTCATTTTCCTTTCTCCTTAAAGGGTAATACTAAGGCACTAATTCATTC
TACGTATTTATTTTCTTAAGTTTTTGTATCATTTTCTTTCTTCCATAAGGGCAGGTCCGTTCCGGACACATGTGCAAGGT
GTTTGACCGAACAGGG
>chr1A_1
GTACTCGAGATCTTGGTCTCCTGGCAACTTTGCCGGTGTGCGATCCATCTCGAATGGCCTGAATGGCCGGACCAGGAGGT
TATTTTGGACTGGGATGGGTGCCCTCTGTTGGGCTCTCTGGACCACTCGGAACAAGTTTACTATTGAGGGCGTCTTCCCT
AACAAACATGCTGATGTTTTGTTCAAAATGTCTATATTCTTGCAGCAGTGGAAATTATTGACTAAGGAGGAGGACCGTGA
CGGGCTGGAGAGGTTGATCACCAAAGTGCGGGCGTCTGCCAATCTGCTTTCCTCCCCAGCCGATGATGTTGCGTCGTAGC
TGCCGTTTCTTTTGTCGCATAGGTGGTGGCCTGCGCGCCCCTTTATCTCATTTGGGCCTGCATGCCGTCTATAAACTCTT
GTTTGT-------CT------TTGCTATGGTTTGGCTGCGAGAC-TTGG-T--TGTCGCGGATCTTTGTTGATCCAGTAC
TCG-TATGTATGGCTTTATTTATAAAGTCGGGCAATGGCCTTTTCTCTAAAAAAA-------------------------
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>chr3A_1
GTATGCGAGACCTTGGTCTCCTGGCAATTTTGCTGATGTTCGATCTATTTCGAATGGCCTGAATGGCCGGGCCAGGAGGC
TATTCTGGACTGGGATGGGCGCCCTTTGCTGGGCTCTCTGGACTATTCGGAACAAGTTTACTATTAAGGGCGTCTTCCCT
AACAAACCTGCTGATGTTTTGTTCAAAATGTCTATACTCTTGCAGCAGTGGAAATTATTG-CTAGGGAGGCGGACCGTGA
CGGGCTAGAGATGCTGATCAACAAAGTGCGGGCATCTACCAATTTGCTATCCTCCCCAGCCGATGTTGTTTCATCATAGC
TGCCGGTTCTTTTGTCTCATAGGTGGTGGCCTGCGTACCCCTTTATCTCATTCAGGTCTGCGTGCCGTTTAAAA-CTGCT
GTCTGT-------CT------TGGTTCCTGTTTGGCTGTAAGAC-TTGG-TG-TGATGAGGATCTCTGTTGGTCCTGTAC
TCT-TTCGTATGACTTTATCTATAAAGTCGGGCAATAGCCTTTTCTCTAAAAAAACATAAT-------------------
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>chr5D_1
GTATTCGACTTCTTGGTCTCCTGGCAACATTGCTGATGTGCGAGCCATCTCGAATGGCCTGAATGGCCGGACCAGGAGGT
TATTTTGGACTGGGATGGGTGCCCTTTGTTGGGATCTCCGGACCACTCGGAACAAGTTTACTATTGAGGTCATCTTCCCT
AATAAACCAGCTGATGTTTTGTTCAAAATGTCTATCTTCTTGCAGCAGTGGAAATTATTTACTAAGGAGGAGGACCTTGA
CGGGCTGGAGAGGTTGATCACCAAAGTGCGGGCGTCTGTCAATCTTCTTTCCTCCCCAGCCAATGATGTTGCGTCGTAGC
TGCCGTTTCTTTTGTCGCATAGGTGGTGGCCTGCGGGCCCCTTTATCTCATTTCGGATTGCGTGCCTCCCATAAACTCTT
GGTTCT-------CT------TCGCTATGGTTTGGCTGTGAGAT-TTGG-T--TGTCGCGGATCATTGTTGATCCAGTAC
TCG-TTCGTATGGCTTTATCTATAAAGTCGGGTAATGGCCTTTTCTCTAAAAAA--------------------------
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>chr4B_1
GTATTCGAGATCTTGGTCTCTTGGCAACTTTGCTGATGTTCGAGCTATTTCGAATGGCCTGAATGGCCGGGCCAGGAGGC
TATTTTGGACTGGGATGGGTGCCCTTTGCTGGGCTCTTTGGACTATTTGAAACAAGTTTACTATCGAGGGCGTCTTCCCT
ATCAAGCCTGCTGATGTTCTGTTCAAAATGTATATACTCTTGCAGGAGTGGAAATTATTGACTAAGGAGGTGGACCGTGA
CGGGCTGGAGAGGCTAATCAACAAAGTGTGGGCGTCTGCCGATTTGCTATCCTCACTAGCCGATGATGCTTCATCATAGT
TGCCGGCTCTTTTGTCTCGTAGGTGGTGGACTGCGTGCCCCTTAATCTCATTCGGGCCTGCGTGCCGTCTAAAA-CTGTT
GTTTG---------T------TCATTCCAGTTTGGCTATAATAC-TTGGGTG-TGCTGAGGAACGCTATTGGTCCTGTAC
TCG-TTTGTATGGCTTTATCTATAAAATTGGGCAATAGCCTTTTCTCTAAAAAAA-------------------------
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>chr7B_1
GTATTCGACCTCTTGTACCCCTGGAACTTTTGTTGATGTTTGATCTATGTCGGCTAGCTTGAATAGTCGGGCCAGGAGGC
TTTTCTGGAATGGGATGGGCGCCCTATGCTGGGCTCTATGGACTATTCGGAAGAAGTTTACTATCGAGGGCGTCTTCCCT
AACAAGCCTGCTGATGTTCTATTTAAAATGTCTATACTCTTGTAGCAGTGGAAATTATTGACTAAGGAGGCGGACCGTGA
CGGGCTAGAGATGTTGATCGACAAAGTGCGGGCGTCTGCCAATTCGCTATCATCCCCAGCCGATGGCGCTTCGTCATAGC
TGTC-GTTCTTTTGTTGCATAGGTGGTGGCCTGCTTGCCCCTTTATCTCATTCGGGCCTGCGTGCCTTCTAAAA-CTGTT
GTTTGT-------CCTGTACCCTGTTTGGGTATGGGTGTGAGAC-TTTGGTG-TGGTGTTGAACTCTGTTGGTCTTGTAC
TCT-TCTGTATGGCTTTATTTATAAAGTCGGGCAATAGCCTTTTCTCTAAAAAAACA-----------------------
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>chr2D_1
GTATTCGACTTCTTGGAACCCAGGTTCCTTTGCTGATGTTTGTTCCATGACGGCTGGCCTGAATGGCCAGGCCAAAAGGC
TTTTCTGGACTGGGATGGGCGCCCTTTGCTGGGCTCTTTGGACTACTCGAAACAAGTTTACTATCGAGGGTGTCTTCCCT
AACAAACCTGCTGATGTTCTGTTTAAAATGTCAATACTCTTGCAGCAGTGGAAATCATTGACTAAAACTGTGGATCGTGA
CGGCCTGGAGATGTTGATCGACATAGTGCGGGCGTCTGCCAATTTGCTTTCATCCCAAGCCGATGGCGCTTCGTTGTAGC
TGCC-TTTCTTTTGCTGCGTAGGTGGTGGCCTGCGTGCCCCTTTATCTTATTCGGGCCTGCGTGCCATCTAAAA-TTGTT
GGTTTT-------GT------GCTCG-----------GTGAGATTTTGGGTG-TGGTGGTGAACTATGCTGGTTCTGTAC
GTGATATGTATGGCTTTATCTATAAAGTCGGGCAGTCGCCTTTTCTCTATAAAAAA------------------------
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>chrUn_11
----------TCTTGGGCTCCTGGTTCCTTTGCTGATGTTCGGATTTTGACGGCCGGCCTGAGTGGTCGGTCCAGGAACC
TATTTTGGACTGGGTTGGGCGCCCTCTGTTGGGCCCTATGGACCATTCGGAACAAGTTTACTATTGAGGGTGTCTTCCCA
AACAAACTTGCTGATGTCCTGTTTAAAGTGTCTATACTCTTGCAGCAGTGGAATTTATTGACTAAATCGGCGGATCGTGA
AGGCCTGGAGATGCTGATCGACAGAGTGCGGGCGTCTGCCAATTTGCTATCTTCTCCAGCCGATGGCGCTTCATCGTAGC
TGCCATCCCTTTTGTTGCGTAGGTGGTGGCCTGCGTGCCCCTTTATCTTATTTGGGCCTGCGTGCCGACCA-AA-CTGTT
GCCTTCCTAGCTGCT------CTGCGTGGGTGTTGTTGTGAGAC-TTTGGTTCTGGTGTCGTACTCTGCTGGTTATGTAC
TCTCTCCGTATGGCTTTATCTATAAAGTCGGGCAATCGCCTTTTCTCTAAAAAAAAAAAT--------------------
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>chrUn_11
----------TCTTGGGCTCCTGGTTCCTTTGCTGATGTTCGGATTTTGACGGCCGGCCTGAGTGGTCGGTCCAGGAACC
TATTTTGGACTGGGTTGGGCGCCCTCTGTTGGGCCCTATGGACCATTCGGAACAAGTTTACTATTGAGGGTGTCTTCCCA
AACAAACCTGCTGATGTCCTGTTTAAAGTGTCTATACTCTTGCAGCAGTGGAATTTATTGACTAAATCGGCGGATCGTGA
AGGCCTGGAGATGCTGATCGACAGAGTGCGGGCGTCTGCCAATTTGCTATCTTCTCCAGCCGATGGCGCTTCATCGTAGC
TGCCTTCCCTTTTGTTGCGTAGGTGGTGGCCTGCGTGCCCCTTTATCTTATTTGGGCCTGCGTGCCGACCA-AA-CTGTT
GCCTTCCTAGCTGCT------CTGCGTGGGTGTTGTTGTGAGAC-TTTGGTTCTGGTGTCGTACTCTGCTGGTTATGTAC
TCTCTCCGTATGGCTTTATCTATAAAGTCGGGCAATCGCCTTTTCTCTAAAAAAA-------------------------
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>chr7D_11
----------TCTTGGGCTCCTGGTTCCTTTGCTGATGTTCGGATTTTGACGGCCGGCCTGAGTGGTCGGTCTAGGAACC
TATTTTGGACTGGGTTGGGCGCCCTCTGTTGGGCCCTATGGACCATTCGGAACAAGTTTACTATTGAGGGTGTTTTCCCA
AACAAACCTGCTGATGTCCTGTTTAAAGTGTCTATACTCTTGCAGCAGTGGAATTTATTGACTAAATCGGCGGATCGTGA
AGGCCTGGAGATGCTGATCGACAGAGTGCGGGCGTCTGCCAATTTGCTATCTTCTCCAGCCGATGGCGCTTCATCGTAGC
TGCCTTCCCTTTTGTTGCGTAGGTGGTGGCCTGCGTGCCCCTTTATCTTATTTGGGCCTGCGTGCCGACCA-AA-CTGTT
GCCTTCCTAGCTGCT------CTGCGTGGGTGTTGTTGTGAGAC-TTTGGTTCTGGTGTCGTACTCTGCTGGTTATGTAC
TCTCTCCGTATGGCTTTATCTATAAAGTCGGGCAATCGCCTTTTCTCTAAAAAAA-------------------------
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>chr1A_550
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-------ATGACTGGTCCTGCAAGCCATGCCTCGCCCGTCGGTCCGACATCCAAAGCCTGTGCTTCACTGTAAGACACAC
AAATACTGCACAAAATAGTAATTCATGCAACTTACACATAGCAAAAATG-AAAAAAAAATTAGAGGACTCTCCTTTTCCT
AAGTCCCTGGCCTCAACATCTGGCCGTTTGGCTTGTTGACAT------------------------------------GG
ACGTGCAAGGACTGCGGGCGCCTTAAATGGTGCATTGCGCCGCTCGAATCTTTCAGCGGACACGTTTACGCGCGTCGATC
GCGCTGGAGTAGTTAACAACACGCCACACGCCATGGCGCGAGACTTGGAGGGCGCGGCACTCCTCCTCGCCGCCTCGGGT
CAACGCTCGACTGCCGGCGCGCGCTGTGGGCTGTGGCGATCTTGTTTATCTAGAGCAGAATTTCGCGACAGGCGGCCGTC
ACTCGTCAGCGCGGTGCGTGAGAGAGACGCCACTCCCCTTCCCTTCGCATATGGCGTCGTCGGAGGGACC---TCGTCGT
CGGCGGCGGGGCAAGAAGAGCGAAGCCAAAAACAAGAAGAAGAAAGAGGCCGGACCGACGACCGTGGAGGACCTCCCCGA
CCACCTCTTCGAGCTCATCCTCCTCCGCCTCGGCCCGTCGCCATGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCGTCGGGAACCCCGGCTTCCTCGCCCGCTTCGGCCCGGTCCACGAGCAGGTCCCGTACGTCGGCGACTACCAC
ACCGTCCAGGGCGGCGAGCCCCTCTTCGTCCCCTCCTCGCCGGTCGTCGTCGACCGCAGCCGCTTCTTCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGAGATCGCGGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACAGTCGCCGTGTCCGCCACTACCCCGACCTTATGGTATGCGAGCCGCTCACCGGGCTCTACCAGGGGATC
CTCTGGCCGGAGGATCTGGACGGAACCGGCCGCCTCGGCGTGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTTGCGGCCGTCGACGATGCCATGGCATGTGTGTTCTCCACGGGCAGGGATGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAATTTCGTAGGGCGCGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCCCTTGACGAGGCCACCGCGGAGTTCTCGCTCGC
CGCATTCCCGGAGACCGTCTGGGGGCCGTCGCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCACGCTGCGCG
TCATCCGCCTCATAGGCAACGACCTCAAGGTCTTCGCACGGCGGCATCCGGGCAGT---GACGAAGATGAGTGGCTGCTG
GAGATGCAGCTGGAGTTGCCGGAGGCCACCCTTAGGCTGCCGGGGCGCGAGGAGCACTTCTTCCGGCAACAAGCCATGGT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAGGCGTGGTTATTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCGAGCACGAGAGAAACAAGTACGCCGGAGAAGCGTACCCGTGCAAGTTGCCGTGGCCGCCGGCCTTGACT
GATCATGGCAGGGAGAGGAGGTGATGATGATGATGCCTGATTGTCATGGCTGCCGACTTTGT------------------
CATCATAGCAGACTAGCAGAGAGGAGGTGATGACGT---CCCTGATCGTGTATCAAAATTTCAAAAGGTTATCCGTTTCG
TCGTATCTGGAACAGATTTGCACTATTTGTATTAAAAAAAATCCGTCCCGTG-TTTTTGCTTCACTCTGTTCTT------
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------------------------------------------TGGGCCAGCCGATTTGTTATTGGGCTGAAACGCATTTC
GTGTTGCCTG-------------------------------------TTTGTATGCATTTTTTGCTTCTCTTTTTTTAAG
TCTGTTTATAGGGGTATATTCAGGATGTTGGATGAGTGTAAAATGTATACATGCAATTACTATATAACATGTGTATAAAT
TGTAGTATAGTGCGAAAATTACACTACTATATGTTTATTCTTTGTAC---------------------------------
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>chr1D_659
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------------------------------------CATAGCAAAAATG-AAAAAAAAAATAGAGGACTATCCTTTTCCT
-AGTCCCTGGCCTCAACATCTGGCCG-TTGGCTTGTTGACAT------------------------------------GG
ACGTGCAAGGACTGCGGGTGCCTTAAATGGTGCATCGCGCTGCTCGAATCTTTCAGCGGACACGTTTACGCGCGTCGATC
GCGCTGGAGTAGTTTACAAGACGCCACACGCCATGGCGCGCGACTTGGAGGGCGCGGCA---CTCCTCGCCGCCTCGGGT
CAACGCTCGACTGCCGGCGCT-------GGCTGTGGCGATCTTGTTTATCTAGAGCAGAATTTCGCTGCAGGCGGTCGTC
ACTCGTCAGCGCGGTGCGTGAGAGA--CGCCACTCCCCTTCCCTTCGCAAATGGCGTCACCGGAGGGACGTCGTCGTTGT
CGTCGGCGGGGCAAGAAGAGCAAGGCCAAA---AAGAAGAAGAGAGAGGCCGGGCCGACGACCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCATGCCTCGTCCGCGCCGCGGCCGCGTGCAGGCGGTGGT
GCCGCGTCGTCGGGAATCCCAGCTTCTTCGCCCGCTTCGGCCCGGTCCACGCGCAGGCCCCGCACGTCGGCGACTACCAC
GCCGTCCACGGGGGACAACCCCTCTTCGTCCCCTCCTCGCCGGCCGTCGTCGACCGCAGCCGCTTCTCCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGACATCGCGGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACAGTCGCCGTGTCCGCCACTACCCCGATCTTATGGTATGCGAGCCGCTCACCGGACTCTACCAGGGGATC
CTCTGGCCGGAGGATCTGAACGGAATCGGCCGCCTTGGCGTGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTTGCGGCCGTCGACGACACCGTGGCATGTGTGTTCTCCACGGGCAGCGAGGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAACTTCGTAGGGCGCGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCTCTTGACGAGACCACGGCGGAGTTCTCGATCGC
CGCACTCCCGGAGACCGTCTGGGGGCCGTCCCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCGTGCTGCACG
TCATACGCCTCATAGGCAACGAGCTCAAGGTCTTCGCACAGTGGCATCCGGGCAGT---GACGAGGATGAGTGGTTGCTG
GAGATGCAGCTGATGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCAAGGAGCACTTTTTCCGGCAACAAGCCATGAT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAATCGTGGTTGTTCTCTGTTGAGCTTGATACAATGC
GAATAGAGCGCAAACACGAGAGAAACAGGTACGCCGGAGAAGCGTACCCGTGCAAGTTGCCATGGCCGCCGGCCTTGGTT
GACCATGGCAGGGAGAGGAGG---TGACGATGATGCCTGATTGTCATGGCTGCCGACTTTGT------------------
CTCATCA------TAGGAGAGAGGAGGTGATGACGT---CCCTCATCGTGCATCAAAATTTCAAAAGGTTATCCGTTTTG
GCGTATCTGAAAAAGGTCTGTCTA--------------------------------------------------------
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>chr1D_1001
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--------------------------------------------------ATGGCGTCATCGGCGGGGCATCG------T
CGGCGGGGC------AAGAACAGGCCCAAA---AAGAAGAAGAAAACGGCCGGACCAACCACCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCGTGCCTCGTCCGCGCCGCGGCCGCGTGCAAGCGGTGGT
GCCGCGTCGTCGCGAACCCCGGCTTCCTCGCCCGCTTCGGCCCG---------CGGGCGCCGCACGTCGGCGACTACCAC
ACCGACCAAGGCGGCCAACCTCTCTTCGTCCCGTCCTCGCCGGTCGCCGTCGACGGCAGGCGCTTCTCCCTCGACTTCCT
CCCGGACAGCGGGTCATGGGACATCGCGGACAGCCGCGGCAGCCTTCTCCTCCTAT------------------------
------------------------GCGACGGCCACGATCTCATCGTCTGCGAGCCGCTCACCGGACTCTACCAGGGGATC
ATCTGGCTTGGCGTGTTCCGGCGT------CGCCTCGGTGCGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CATGTCCAACTTCAGGGTCCTCGCTGCCTTCGACAGAACCACTGCCTGCATCTTCTCCACCGGCAGCGACGGCGGGTGGC
GCCTCGTGTCCAGCGCGATCACCGGCGACATCGAGCTCCCATCAACGCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAT
GGCACTATATATTGGGGAATCGAAGGAAGTGACACCGATGTACTTGTTCTTGATGAGTCCACGGCGGAGTTCTCAACCGC
CGCATTGCCGGAGGCCTTATGGTGGCCATCCCACAAGGGGATCTCTCGGGTTGTGGGCGGCGAGGACGGCGTGCTGCGCG
TCATCCGCCTGATAAACAACGAGCTTAAGGTGTTTGCACGGCGGCGCCCAGACAGCGACGACGACGATGAGTGGTCGCTA
GAGATGCAGCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCGAAGAGAGCTTTTTCCAGCAAGAAGCCATGAT
TGTCTCCGCGAATACTCGATACGTCCTGCTGACACCGAGCGAGGAGACGTGGCTGTTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCAATCACGAGAGGAACAAGTACGCCGGAGCAGCTCACCCGTACAAGTTGCCGTGGCCGCCGGCTTTGGCT
GATCCTAGCAGGGAGAGGGGG-----------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1A_1001
--------------------------------------------------------------------------------
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--------------------------------------------------ATGGCGTCATCAGCGGGGCATCG------T
CGGCGGGGC------AAGAACAGGCCCAAA---AAGAAGAAGAAAATGGCCGGACCAACCACCGTGCAGGACCTCCCTGA
CCATCTCTTCGAGCTCGTCCTCGCCCGCCTCGGCCCGTCCCCGTGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCATCGCCAACCCCGGCTTCCTCGCCCGCTTCGGCCCG---------CAGGCGCCGCACGTCGGCGACTACCAC
ACCGACCACGGCGGTCGACCCCTCTTCGTCCCGTCCTCGCCGGTCGTCGTCGACTGCAGCCGCTTCTCCCTCGACTTCCT
CCCGGACAGCGGATCGTGGGACATCGCGGACAGCCGCGGCAGCCTTCTCCTCCTAT------------------------
------------------------GCGACGGCTACGATCTAATCGTTTGCGAGCCGCTCACCGGACTCTACCAGGGGATC
CTCTGGCCTGGCGTGTTCCGGCGT------CGCCTGGGCGTGTTCCTGCTCGACGGCGACGACGCGGACCGCCGCGTCAG
CATGTCCAACTTCAGGGTCCTCGCTGCCTTCGACGAAACCACTGCGTGCATCTTCTCCACCGGCGGGGACGGCGGTTGGC
GCCTCGTGTCCAGCGCTATCGCCGGCGACATCGAGCTCCCGTCAACGCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAT
GGCACTGTATATTGGGGAATCGAAGGAAGTGACACCGATGTACTTGTTCTTGCTGAGTCCACGGCGGAGTTCTCCATCGC
CGCATTCCCGGAGACCGTGTGGTGGCCATCCCACAGAGGGATCTCTCGGGTTGTGGGCGGCGACGACGGCGTGCTGCGCG
TTATACGCCTGATAAACAACGAGCTCAAGGTCTTTGCACGCCGGCATCCAGACAGTGATGG---CGATGAGTGGTTGCTG
GAGATGCACCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCAAAGAGAGCTTTTTCCAGCAAGAAGCCATGAT
TGTCTCCGCGAATGCTGGATACGTCCTGCTGACACCGAGCGAGGAGACGTGGCTGTTCTCCGTTGAGCTGGACACGATGC
GAGTTGAGCGCGAGCACGAGAGAAACAAGTACGCCGGAGCAGCTCACCCGTACAAGCTGCCGTGGCCGCCGGCTTTGGCT
GATCATAGCGGGGAGAGCAGGCGATGA-----------------------------------------------------
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>chrUn_1001
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--------------------------------------------------ATGGCGTCATCGGCGGGGCATCG------T
CGTCGGGGC------AAGAACAGGCCCAAA---AAGAAGAAGAAAATGGCCGGACCAACGACCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCGTGCCTCGTCCGCGCCGCGGCCGCGTGCAAGCGGTGGT
GCCGCGTCGCTGCGAATCCCGGCTTCCTCGCCCGCTTCGACCCG---------CAGGCACCGCACGTCGGCGACTACCAC
ACCGACAAAGGCGGTCAACCTCTCTTCGTCCCGTCCTCGCCGGCCGTCGTTGACCGCAGCCGCTTCTCCCTCGACTTCCT
CCCGGACATCGCGTCATGGGACATCGTGGACAGCCGCGGCAGCCTTCTCCTCCTAT------------------------
------------------------GCGATGGCGGCGATCTTATCGTCTGCGAGCCGCTCACCGGACTCTACCAGGGGATC
CTCTGGCCTGGCGTGTTCCGTCGT------CGCCTTGGCGTGTTCCTGCTCGACGGCGGCGACGCGGACCGCCGTGTCAG
CATGTCCAACTTCAGGGTCCTCGCTGCCTTTGACAAATCCATTGCCTGCATCTTCTCCACCGGCAGCGACGGCGGTTGGC
GCCTCGTGTCCAGCGCGATCACCGGCGACATCGAGCTCCCGTCAACGCTCCGCCCCGAAAATTTCGTCGGGCGTGCAAAT
GGCACAATGTATTGGGGAATCGAAGGAAGTGACACCGCCGTACTTGCTCTCGATGAGTCCACGGCGGAGTTCTCCATCGC
CGCATTCCCGGAGGCCGTCTGGTGGCCATCCCACAAAGGGGTCTCTCGGGTTGTGGGCGGCGAGGACGGCGTGCTGCAGG
TCATCCGCCTGATAAACAACGAGCTCAAGGTCTTTGCACGGCGGCATGCCGACAGTGACGACGACGATGAGTGGTTGCTG
GAGATGCAGCTGGGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCAAAGAGAGCTTCTTCCAGCAAGAAGCCATGAT
TGTCTCCGCGAATGCTAGATACGTCCTGCTGACACCGAGCGAGGAGACGTGGCTGTTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCAAGCACGAGAGAAACAAGTACGCCGGAGCAGCTCACCCGTACAAGTTGCCGTGGCCGCCGGCTTTGGCT
GATCATAGCAGGGAGAGGAGG---CGATGACGGCTCTGATCGTGTATCAACTATCAAGTACGGCGTGCATGGCAGCCTTG
CTGATCA------TAGGAAAGAGGAGGTTGATGATGATGCCCTGATTGTGTATT-AAATTTCTGAAGATTGTCCTATTCT
CTGTATCATGAACATATTTGCACTTTCTCTAGGAAAAAAACCGGATCCCATG-TTCTATCTTCTCTTTGTTCATGCGTGT
GCCTCTCCTCGACTCCTGCC------------------------------------------------------------
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----------------
>SNPs
---------------------------------------------------------S--------------------S-
-S--------S-----------S-------------------------S------S-------------S----------
--------------------------------------------S-------------------------------S---
---------------------------S----S--S-----------------S----S----------S----------
-----S-----------S----------------------------------------------------S---------
--S---------------------------------------------S---------------------------S---
-----------------------------------S---S----S----------------SSSSSSSSSSSSSSSSSSS
SSSSSSS---S-----------S-S-SS------S-------------S----S--------S-S-----S---S-----
-----------S---------------------SSS-------------S---SS-----S----------S--------
---------------------SS----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
---------------------------------------------------------S----------------------
---------------------------------------------------S-------------SS-------------
--------------------------------------------------------------------------------
------------S-----S-----------------------------S-------------------------------
--------------S----------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-----------SS----S----S------------------------------------S--------------S-S---
--------------------------S------------------------S---------------S------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-------------------------------------SS-----------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------S-------------------------------S-----------------------------S---------
--------------S-----------------------------------------------------------------
-------------------------------S-----------------S-------S----------------------
--------------------------------S-------------S-----S---------------------------
-------S-S-------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------S---------------S------
--S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------SSSS
S-----------------------------S-------------------S-----------------------------
----S--S----SS-------S-------------------S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_631
--------------------------------------------------------------------------------
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---------------------------------------------------CATAGCCTGTGTTGCACTGC---------
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----------------
>reverse_2668
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------GACTGGACACTGTTTTGGGC---------------------------------
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----------------
