>input_sequence_56627
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-------------------------------------------------------TTATAAAAGAGAGGGCATCGCATCC
CTCCCCTTCCTTTATCCACCCCATCCAAATCCCCC-GATTCCTCCAACCCTCCCAGACCGCAATGGCCGCCGCCG-----
-------CCGCCGAGCCCTCCTCCGCCGACAGCCGCCGCTACGTCGTCGGCTACGCGCTCGCGCCCAAGAAGCAGAACAG
CTTCATCAAGCCCTCGCTCATCTCCCGCGCGGCGGCGCGCGGCGTCGACCTCGTCCCCGTCGACGACGCGCGGCCCCTCG
CCGACCAGGGCCCCTTCGACCTCGTCATCCACAAGCTCTACGGCCACGACTGGCGCGCCCAGCTCCAGGCCTTCTCCGCC
CGCTACCCCTCCGTCCCCGTCGTCGACCCGCCCCACGCCATCGACCGCCTCCACAACCGCATCTCCATGCTCCAGGTCGT
CTCCGAGCTCGACGTCCCGCTCTCCGACGCCGCCTCCGCCTCCGCTGACGGCGAAGGCCACCGCCACACCTTCGGCATCC
CCAGCCAGGTCGTCGTCTACGACGCCGCCGCGCTCGCCGACTCGGGCCTCCTCGCCGCGCTCCGCTTCCCGCTCATCGCC
AAGCCCCTCGTCGCCGACGGCAGCGCCAAGTCGCACAAGATGTCCCTCGTCTACCACCGAGAGGGGCTCCGCAAGCTCCG
CCCGCCGCTCGTCCTGCAGGAGTTCGTCAACCACGGGGGCGTCATCTTCAAGGTTTACGTCGTCGGCGGCCACGTCACCT
GCGTCAAGCGCCGCAGCCTACCGGACGTCTCGAAGGAGATCCTCGAGGACGCCGCCGCCGAGGGCACCATCTCCTTCTCG
CAGGTATCCAATCTCCCCAATCAGCGCACGGCCGAGGAGTACTACGAGGACATGCGGCTCGAGGACGCCGTCATGCCGCC
CACTGATTTCGTCAACGAGATCGCAGGCGGGCTCCGCCGTGCCCTGGGCCTGCAGCTCTTCAACTTCGACATGATCCGGG
ATGTTCGTGCCGGGGACCGGTATCTCGTCATTGACATCAACTACTTCCCCGGTTACGCGAAGATGCCCGGCTACGAAATT
GTCCTTACTAATTTCTTCTGGGATATGGTTCACAAGGACGACGTGGCCCTCAAGGAGGAGGAGGAGCAGAGCAATCATGC
TGTTGTGAAATGAGATGGATTTGCTCGGCATAGCTTGCTCGCAAACCTGCAATTCTTTCATGTCTGGGGGAAATGTGAGG
TGGCAGGATGGTTACAAGACTCGAGGGGA---------------------------------------------------
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>chr1D_1_TraesCS1D01G198000
ATCGTCAATCATAGCAGTACAAAGAACAACAGAGATAATGCAAATTACAATCATGTCCATGGATCACCTAGCGGCGTCTA
CAA-GCACTAGAGCAAGCCGAAGACGCGCCGCCGTTATCGCCCTTCCCTCATCGGAGCTAGACAAA---TCTTATAATAG
TCAGTCGGGAAATCATCGTGTTAAGGCCCC-TAGGACCAGC--GCACCAGAGTAGCAACCATCGCCGATGAAGAAACTCG
TAAATCAGAAGAA-TCAAACATGTAAACACCCGAACGAAGACGAATGAAGACTGGATCCAAACAGATCTACCAAAGACCA
GCACCGGTCGAATCCCACGAGATCCGACGGAGACACACCTCCACACGCCCTTTGACGATGCTAGACACACCATCAGGACA
GGGATATAACGTGGGAGACATTATTTCT---TCTAAGGGACATCGCCGCCGCCACACAGCCCCAACGAAGACGTTGAACC
TAACAAGAACGAGAACGGGGTCCCTCCCACCGGCGGAGGGGGGGGATCCACCGCGCCTCCATGGCCTAGGGTTTTTTTTT
TCTGGATTTATTTCATACTTTTTGGCGATGCTCGTTAAGTGAGAGGATATGTTCCCGTCGACTACGAAGACGTTTGTGGT
GACTTCATCGATCTCAAAATAATATGCATGCCCAGTCTCTCGGAGATGCTTACAAGGGTAAGAAACGTATGCGTTCATAC
TAATAAATGTATGTGCGTATGTATGAGTGTCTGCGTGCAGATTGTGTTTAAAAAAAAACCAACTCGCGTGAAAAGGACTA
ACAGGTCCCGGAAAGGAAAAACTAGAACAGCAATGGTTAACCAACACCCAAAA----CAAAGATGAGATGGTCCATGAGG
GTTTAGCATCGTACGATGATTTGTTAACAAATGCAGCCAGCCCACGGGCGTAGACCCGGTCCACGGAGACAGGGCGGAGA
GGAGACGAAGGGGATTCTTTCGACCTGAGAATTACTCCAGATCGAATCGATCTGTTTATAAAAGAGAGGGCATCGCATCC
CTCCCCTTCCTTTATCCACCCCATCCAAATCCCCC-GATTCCTCCAACCCTCCCAGACCGCAATGGCCGCCGCCG-----
-------CCGCCGAGCCCTCCTCCGCCGACAGCCGCCGCTACGTCGTCGGCTACGCGCTCGCGCCCAAGAAGCAGAACAG
CTTCATCAAGCCCTCGCTCATCTCCCGCGCGGCGGCGCGCGGCGTCGACCTCGTCCCCGTCGACGACGCGCGGCCCCTCG
CCGACCAGGGCCCCTTCGACCTCGTCATCCACAAGCTCTACGGCCACGACTGGCGCGCCCAGCTCCAGGCCTTCTCCGCC
CGCTACCCCTCCGTCCCCGTCGTCGACCCGCCCCACGCCATCGACCGCCTCCACAACCGCATCTCCATGCTCCAGGTCGT
CTCCGAGCTCGACGTCCCGCTCTCCGACGCCGCCTCCGCCTCCGCTGACGGCGAAGGCCACCGCCACACCTTCGGCATCC
CCAGCCAGGTCGTCGTCTACGACGCCGCCGCGCTCGCCGACTCGGGCCTCCTCGCCGCGCTCCGCTTCCCGCTCATCGCC
AAGCCCCTCGTCGCCGACGGCAGCGCCAAGTCGCACAAGATGTCCCTCGTCTACCACCGAGAGGGGCTCCGCAAGCTCCG
CCCGCCGCTCGTCCTGCAGGAGTTCGTCAACCACGGGGGCGTCATCTTCAAGGTTTACGTCGTCGGCGGCCACGTCACCT
GCGTCAAGCGCCGCAGCCTACCGGACGTCTCGAAGGAGATCCTCGAGGACGCCGCCGCCGAGGGCACCATCTCCTTCTCG
CAGGTATCCAATCTCCCCAATCAGCGCACGGCCGAGGAGTACTACGAGGACATGCGGCTCGAGGACGCCGTCATGCCGCC
CACTGATTTCGTCAACGAGATCGCAGGCGGGCTCCGCCGTGCCCTGGGCCTGCAGCTCTTCAACTTCGACATGATCCGGG
ATGTTCGTGCCGGGGACCGGTATCTCGTCATTGACATCAACTACTTCCCCGGTTACGCGAAGATGCCCGGCTACGAAATT
GTCCTTACTAATTTCTTCTGGGATATGGTTCACAAGGACGACGTGGCCCTCAAGGAGGAGGAGGAGCAGAGCAATCATGC
TGTTGTGAAATGAGATGGATTTGCTCGGCATAGCTTGCTCGCAAACCTGCAATTCTTTCATGTCTGGGGGAAATGTGAGG
TGGCAGGATGGTTACAAGACTCGAGGGGAATAACGAGCAACCAATTAGGATGGGGAGACGGGGATCAACAGGTTCTGGAT
TTACTTGGGTTTCAACCAGCCGCAAGCGGAGGACCTGCAATGTAAATCCTCTCTCCTTGCTCCTGTCATACCGGTTGTTT
AGGTATCTTTCTGTTCTTCGTAATTTGCTTCACCCAGTTTAGTTAGAAC-AAAGTGGGGGAACGGAAGCCAAGTTCTGAA
GAAGCTATATTTGTTCTGGATGTGCAAATCTTTTGTTCTTGATGAGTACTGGATGAATGGCAACCCAAC--CTTAGTGGT
ACTAA-ATGATGAATATGTTTCCAATGATACTGGAGGTCTG--AGTTTTATCACCTCCTCGAAAGAAAGGGGTTATGCAA
TTCTCTGAACTTTTAGCATTTGAAATGCAAACTTGAGTCAGCTCTGTCTGTGGCACCAGTTCTATCATCCAAAACTGAAT
TTTACATCTGTGATCAGAGTTAAATATATACATGTACCTGCAATGATGTCATTTACCCTATGCTTGACTATCTGTTTTTG
AAATTTGGTTTACTGGAGAAACTCTCATTTGCACGTATGATTATCCTA---TGTGAACATGGATTCCTGCTTAATACTCC
ACTTTTTTATGGAGTAACATAATTTGAAGCGTTTGTAAGTTGCATGAGGGCAACCTTTGCACATATTCCTTCATAATTTG
AAATTTTTAACCCTGAATGCACTTGCATGTTTTACTGGACTCTGTGCAACTTCAGATTATTTGCTGCATCATGGCATGTT
TTCCTTATAGCGATATTGTGATAGTGCCTTACTTTTCTTTAGAGTGTGAAAACAGCAGGGAAGAATTTGGCTGTTATCTT
TATCAGTTTCAGTTGAAAGAGTGAACAAGATAGCCGTAAGCATTTTGCATTGCAACCATTCATTGCTTTATTTTATTTTG
TTTTCCGGCCGCTCGAACTTCATGTTTTGAATAATGACCTATTTTCCTTTACTAGAAATTTGTTCTGTTATTGGGACC
>chr1D_1
ATCTTCAATCATGACGGTACAAAGAACAACAGAGGTAATACAAATTACAACCATGTCCGTGGACCACCTAGCGACAACTA
CAA-GCACTAGAGCGAGCCAAAGGCGCGGCGCTGTCATCGCCCCTCCCTCACCGGAGCCGGGCAAACCTTGTTGTAGTGG
ACAGTCGGGAAGTCGTCGTGCTAAGGCCCGATAGGACCAGC--ACACCAGAGTAGCAACCATCGCCGATGAAGAAAGTCG
TAGAGCAGAAGGA-TCAAACCTGTAAACACCTAAGCGAAGACGAACGAAGACCGGATCCAAATAGATCCACCGAGGACCA
GCATCGACCGAATGCCGCAAGATCCGATGGAGACAAACCTGCACACGCCCTCCGATGATTCTAGACGCACCATCGGGACG
GGGATAGAACGTGGGAGACATTATTCCT---ACTAAGGGACAACGCCGCCGGCACACAGCCCTAACCAAGAAGCTGACTC
TAACAAGAACGAGAACAGGGTCCCTCCCGCCGGTGGGGGGCCGAGATCCTCTGCACCTCCATGGCCTAG-----------
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>chr5B_1
ATCTTCAATCATGGAAATAAAAAGAACAACAGAGGTAATAAATATTACAATCATGTCCATAGAATACCTAGCGACGACTA
CAA-GCACTGGCGCGAGCCAAAGGCGCCCCACCATTATCGCCTCTCCCTCACCGGAGCCGGGCAAACCTTGTTATAGTAG
ACAGTCGGGAAGTCTTCATGCTAAGGCCCC-AAGGACCAGC--GCACCAGAGTAACAACCATCGTTGATGAAGAAAGTCG
TAGATCAGAAAAAGTCAAACCTGTAAACACCCAAACGAAGACGAATGGAGACCGGATCCAAACAGATCCACCGAAGACTG
GCACCGACCGAATCCCTCGAGATCCAACGGAGACAAACTTCCACACGCCCTCTAACGATGCCAGACGCACCATCCGGACG
TGGATAGAACGTGTGAGACATTATTCCT---ACTAAGGAACATCGCCGCCGCCGCACAGCCCCAACCAAGACGCTGAATC
TAACAAGAACGAGAACGGGGTCCCTCCCGCCGGCAGGGGGCCGAGATCCTCCGCACCTCCATGG----------------
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>chr3D_1
ATCTTCAATTATGGCAGTACAAAGAACAACAGAGGTAATAAAAATTATAATCATATCCGTGGACCACCTAGCGACGACTA
CAA-GCACTAGAGTGAGACGAAGGCGCGTCGCCATCATCGCCCCTCCCTCACCAGAGCTAGTCATACCTTGTTGTAGTAG
ACAGTCGGGAAGTCGTCGTGCTAAGGCCCCATAGGACCAGCGCGCACCAGAGTAGAAACCATCGCTGATGAAGAAAGTCG
TAGATCAGAA-GGATC-AACCTGTAAACACATAAACGAAGACGAACGGAGACCGGATCCATATAGATCCAGGAAAGACCA
GAACCGACTGAATCCCGCAAGATCCGACGGAGACAAACCTCCACACGCGCTCCCATGATGCTAGACGCACCATCGGGACG
GGGATAGAACGTGGGAGACATTATTCCT---ACTAAGGGACATCGCCGCCGCCACACAGCCCCAACCAAGATGCTGACTC
TAACAAGAACGAGAACGGGGTCCCTCCCGCCGGCGGGGGGACGAGATCCTCCGCTCCTTCATGGCCTAG-----------
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>chr2A_1
ATCTTCAATCATGGGAGTACAAAAAATAACAGAAGTAATAAAAATTACAACCATGTCTGTCAACCACTTAGAGACGACTA
CAA-GCACTGGAGCGAGCCGAAGGCGCGCCGCCGTCATCGCCCCTCCCTCACCGGAGTCGGACCAACATTGTTGTAGTAG
ACAGTCGGGAAGTCGTCGTGCTAAGACCCCAAAGGACCAGC--GCACCAGAGTAGCAACCATCGCCGATGAAGAAAGTCG
TAGATCAGAAGGA-TCAAACCTGTAAACACCTAAATGAAGACGAACGGAGACCGGATCCAAATAGATCCACCGAAGACCA
GCACCGACCAAATCCCGCAAGATCTGACGGAGACAAATCTCCACACGCCCTCCGACGATGCTAGACGCACCATCGGACCG
GGGATAGAACATGGGAGACATTATTCCT---ACTAAAGGACATCGCCGCCGCCACACATCCCCAACCAAGATGCTGACTC
TAACAAGAACGAGAACGGGGTCCCTCCCGCCGGCGGGGGGCCGAGATCCTCCGCACCTCCATGGCCTAG-----------
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>chr6D_1
ATCTTCAATCATGGCAGTACAAAGAACAACGGAGTTAATAAAAATTGCAACCATGTCCGTGGACTACCTAGCAACGACTA
CAA-GCACTGGAGCGAGTCGAAGACGCACCGCCGTCATCGCCCCTCCCTCATCGGAGTCGGGCAAATCTTGTTGTAATAG
ACAGTCGGGAAGTCATCGAGCTAAGGCCCCATAGGACCAGC--GCACCAGAGTAGCAACCATCACCGATAAAGAAAGTCG
TAGATCAGAAGAA-TCAAACCTGTAAGCACCTAAACGCAGACGAACAAAAA-CGGATCCAAATAGATCCACCGAAGACCA
GCACCGACCGAATCCCGCAAGATCCGACGAAAACAAACCTCCACACACCCTCTGAAGATGGTAGACAAACCATTGGGACG
GAGATAGAACGTGGGAGGCATTATTCCT---ACTAAGGGACATCACTGCCGCCACACAGCTTCAACC-AGACGCTGACCC
TAACAAAAACGAGAACGAGGTCCCTCCCACCGGCGGGGGGCCGAGATCCTCCATACCTCCATGACCTAG-----------
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>chr5D_1
ATCTTCAATCATGGCAGTACAAATAACAACAGAGCTAATAAAAATTAAAACCATGTCTGTGGACCACCTAGCGACGACTA
CAA-GCACTGGAGCGAGCCAAAAACGCGCCGCCGTCATCGCCCCTTCCTCACCGGAGCCGGGGAAACCTTGTTGTAGTAG
ACAGTCGGGAAGTCGTCGTGCTAAGGCACCATAGGACCAGC--GCACCAGAGTAGCAACCATCACTGATGAAGAAAGTCG
TAGATCAGAAGGA-TCAAACCTGTAAACACCCAGACGAAGACGAACGAAGATAGGATCAAAACACATCCACCGAAGACCA
GCACCGACCGGATCCCGCGAGATCCGACGAAGACAAACCTCACG----CCTCCAACGATGCTAAAAGCATCATCGGGACG
GGGATAGAACATGGGAGACATTATTTCT---ACTAAGGGACATCGCCGCCGCCACACATCTCCAACCAAGACATTGAATC
TAACAAGAACGAGAACGGGGCCCCTCCCGCCGGCGGGGG-ACGAGATCCTCTGCACCTCCATGGCCTAGAGGT-------
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>chr1D_5
----TCAATCATGGAAGTACAAAGAACAATAGAGGTAATA-AAATTACAACCATGTCCGTGGACCACCTAGTGACGACTA
CAA-GCACTGGAGCGAGTCGAAGGCGCGCCGCCGTCATCTCCCCTCCCTCACTGGAGCCTGGCAAACCTTGTTGTAGAAT
ACAGTCGGGAAGTCGTCGTGCTAAGACCCCATAGGACCAGC--GCACCAGAGTAGCAACCATCGCCAATGAAGAAAGTCG
TAGGTCAGAA-GA-TCAAACCCGTAAACACCTAAACGAAGACGAACGAAGATCGGATCCAAATAGATCCACCAAAGACCA
GCACCGACCGAATCTCGCAAGATCTGACGAAGACAAACCTCCACACGCCCTCCGACGATGCTAGACACACCATCGGGACG
GGGATAGAACGTGGGAGACATTATTCCT---AATAAGGGACATCGCCGCTGCCACACAGCCG-AACCAAGAAGCTGAATG
TAATAAGAACGAGAACGGGATCCCTCCCGTCAGCGGGGGGCCGAGATCCTC-GCAACTCCATGGCCTAG-----------
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>chr3B_5
----TCAATCATGTCAGTAGAAAGAACAACAGAGGTAATAAAAATTACAACCATGTCTGTGGACCACCTAGCGATAACTA
C-A-GCACTGGAGCGAACCGAAGGCGCGCCGCCGTCATTGCCCCTCCCTCACAAGAGCTGGGCAAACCTTCTTGTAGTAG
ACAGTCGGGAAGTCATCGTGCTAAGGCCCCATAGGACCAGC--GCACCAGAGTAGCAACCATCGCCGATGAAGAAAGTTG
TAGATCGGAAGGA-TCAAACCTGTAAACACCCAAACGAGGACGAATGAAGACCGGATCTAAACAGATCCACCGAAGACCA
CCACCGACCGAATCTCGCGAGATTCGACGGAGACAAACCTCGACACGCCCTCCGACGATGGTAGATAGACCATCGGGGCG
GGGATAGAACGTGGGAGACATTATTCCTACTACTAAGAGACATCGCCGCCGCCACACAGTCCCAACTAAGACATTGAACC
TAACAAGAACGAGAACGGGGTCCCTCTCGCCGGCGGGGGGTCGAGATCCTCCGCACCTCCATGGCCTAGAGT--------
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>chr3B_5
----TCAATCATGTCAGTACAAAGAACAACAAAGGTAATAAAAATTACAATCATGTCCGTGGACCACCTAGCGATAACTA
C-ACGCATTGGAGCGAACCGAAGGCGCGCCGCCGTCATTGCCCCTCCCTCACAAGAGCCGGGCAAACCTTCTTGTAGTAG
ACAATCGGAAAGTCATCGTGCTAAGGCCCCATAGGACCAGC--GCACCAGAGTAGCAACTATCGCCGATGAAGAAAGTTG
TAGATCGGAAGGA-TCAAACCTGTAAACACCCAAACGAGGACGAACGAAGACCGGATCCAAACAGATCCACCGAAGACCA
CCACCGACCGAATCTCGCGAGATTTGACGGAGACAAACCTCGACACGCCCTCCGACGATGGTAGATAGACCATCGGGGCA
GGGATAGAACGTCGGAGACATTATTCCTACTACTAAGAGACATCGCCGCCGCCACACAGCCCCAACTAAGACATTGAACC
TAACAAGAACGAGAACGGGGTCCCACCCGCCGGCGGGGGGTCGAGATCCTCCGCACCTCCATGGCCTAGAGT--------
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>chr1A_546
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----------------------------------------------------------------------------TTTT
TCTGGATTTATTTCAGACTTTTCGGCGATGCTCGTTAAGTGAGAGGATACGTTTCTGTCGACTACGAAGATGTCTGTGAT
GACTTCGCCAATCTCAAAATGATATGCCGGCTCAGTCTCTCAAATGTGCTTACAAGGC-----------TGCGTTCATAG
GGATGAGTGTATATACGTATGCATGAGTGTCTGCGTTCAGACTGTGTTTTGAAAAAAAA-AACTCACGTGAAAAGGACTA
ACAGGTCCTGGAAAGGAAAAACTAGAACAGCAATGGTTAACCAACACCCAAAA----CAAAGATGAGATGGTCCATGAGG
GTTTAGCATCGTACGATGA-TTGTTAACAAATGCAGCCAGCCCACGGGCGTAGACCCGGTCCACGGAGACAGGGCGGAGA
GGAGACGAAGGGGGTTCTTTCGACCTGAGAATTACTCCAGATCGAATCGATCTGTTTATAAAAGAGAGGGCATCACACCC
CTCCCCTTCCTTTATCCACCCCATCCAAATCCC-C-GATTCCTCCAACCCTCCCAGACCGCAATGGCCGCCGCCGCCGCC
GCCGCCGCCGCCGAGCCCTCCTCCGCCGACAGCCGCCGCTACGTCGTGGGCTACGCGCTCGCGCCCAAGAAGCAGAACAG
CTTCATCAAGCCCTCGCTCATCTCCCGCGCGGCGGCGCGCGGCGTGGACCTCGTCCCCGTCGACGACGCGCGGCCCCTCG
CCGACCAGGGCCCCTTCGACCTCGTCATCCACAAGCTCTACGGCCACGACTGGCGCGCCCAGCTCCAGGCCTTCTCCGCC
CGCTACCCCTCCGTCCCCGTCGTCGACCCGCCCCACGCCATCGACCGCCTCCACAACCGCATCTCCATGCTCCAGGTCGT
CTCCGAGCTCGACGTCCCGCTCACCGACGCCGCCTCCGCCTCCGCTGACGGCGAAGGCCACCGCCACACCTTCGGCATCC
CCAGCCAGGTCGTCGTCTACGACGCCGCCGCGCTCGCCGACTCGGGCCTCCTCGCCGCGCTCCGCTTCCCGCTCATCGCC
AAGCCCCTCGTCGCCGACGGCAGCGCCAAGTCGCACAAGATGTCCCTCGTCTACCACCGAGAGGGGCTCCGCAAGCTCCG
CCCGCCGCTCGTCCTGCAGGAGTTCGTCAACCACGGCGGCGTCATATTCAAGGTTTACGTCGTCGGCGGCCACGTCACCT
GCGTCAAGCGCCGCAGCCTACCGGACGTCTCCAAGGAGATCCTCGAGGACGCCGCCGCCGAGGGCACCATCTCCTTCTCG
CAGGTATCCAATCTCCCCAATCAGCGCACGGCCGAGGAGTACTACGAGGACATGCGGCTCGAGGACGCCGTCATGCCGCC
CACTGATTTCGTCAACGAGATCGCAGGCGGGCTCCGCCGTGCCCTGGGCCTGCAGCTCTTCAACTTCGACATGATCCGGG
ATGTTCGTGCCGGGAACCGGTATCTCGTCATTGACATCAACTACTTCCCCGGTTACGCGAAGATGCCCGGCTACGAGATT
GTCCTTACTGATTTCTTCTGGGATATGGTTCACAAGGACGACGTGGCCCTCAAGGAGGAGGAGCAGCAGAGCAATCATGC
TGTTGTGAAATGAGATGGATTTGCTCGGCATAGCTTGCTCGCAAACCTGCAATTCTTTCATGTCTGGGGGAAATGTGAGG
TGGCAGGATGGTTACAAGACTCGAGGGGAATAACGAGCAACCAATTAGGATGGGGAGATGGGGATTAACAGGTTCTGGAT
TTACTTGGGTTTCAACCAGCCGCAAGCGGAGGACCTGCAATGTAAATCCTCTCTCCTTGCTCCTGTCATACCGGTTGTTT
AGGTATCTTTCTGTTCTTCGTAATTTGCTTCACCCAGTTTAGTTAGAACAAAAGTGGGGGAACAGAAGCCAAGTTCTGAA
GAAGATATATTTGTTCTGGATGTGCAAACCTTTTGTTCTTGATGAGTACTGGATGAATGGCAACCCAAAATCTTAGTGGT
ACTGCGATGATGAATATGTTTCCAATGATACCGGAGCTCCGAAAGTTTTATCGCCTCCTTGAAAGAAAGGGGTGATGCTA
TTCTCTGAACTTTTAGCATTTGAAATTCAAACTTGAGTCAGTTCTGTCTGTGGCACCGGTTCTATCATCGAAAACTGAAT
TTTACATCTGTGACCAGAGTTAAATATATACATGTACCTGCAATGATGTCATTTACCCTATGCTTGACTATCTGTTTATG
AAATTCGTTTTACTGGAGAAACTCTCATAAGCACATATGATTATCCTATAATGTGAACATGGATTCCTGCTTGCTACTCC
ACTTTTTTATGGAGTAACATAATTTGAAGCGTTTGTAAGTTGCATGAGGGCAACCTTTCCACATATTCCTTCATAATTTG
AAATGTTTAACCTTGAGTGCACTTGCATGTTTTACTGGACTCTGTGCAACTCCAGATTATTGGCTGCATCATGGCATGTT
TTCCTTATAGCGATATTGTGATAGTGCCTTACTTTTCTTTAGAGTGTGAAAACAGCAGGGAAGAATTTGGCTGTTATCTG
TATCAGTTTCAGTTGAAAAGGTGAACAAGATAGCCATAAGCATTTTGCATTGCAACCATTCATTGCTTTATTTTGTTTTA
TTTTCTGGCCGCTCTAACTTCATGTTTTGAATAATGACCTATTTTCCTTTACTAGAAATTTGTTCAGTTTTTGGGACC
>chr1B_761
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----------------------------------------------------AAAAAAA-AACTCGCGTGAAAAGGACTA
ACAGGTCCTGGAAAGGAAAAACTAGAACAGCAATGGTTAACCAACACCCAAAACAAACAAAGATGAGATGGTCCATGAGG
GTTTAGCATCGTACGAT-----GTTAACAAATGCAGCCAGCCCACGGGCGTAGACCCGGTCCACGGGGACAGAGCGGAGA
GGAGACGAAGGGGATTCTTTCGACCTGAGAATT-----AGATCGAATCGATCTGTTTATAAAAGAGAGGGCATCACATCC
CTCCCCTTCCTTTATCCACCCCATCCAAATCCC-CCGATTCCTCCAACCCTCCCAGACCGCAATGGCCGCCGCCGC----
-----CGCCGCCGAGCCCTCCTCCGCCGACAGCCGCCGCTACGTCGTCGGCTACGCGCTCGCGCCCAAGAAGCAGAACAG
CTTCATCAAGCCCTCGCTCATCTCCCGCGCGGCGGCGCGCGGCGTCGACCTCGTCCCCGTCGACAACGCGCGGCCCCTCG
CGGACCAGGGCCCCTTCGACCTCGTCATCCACAAGCTCTACGGCCACGACTGGCGCGCCCAGCTCCAGGCCTTCTCCGCC
CGCTACCCCTCCGTCCCCGTTATCGACCCGCCCCACGCCATCGACCGCCTCCACAACCGCATCTCCATGCTCCAGGTCGT
CTCTGAGCTCGACGTCCCGCTCACCGACGCCGCCTCCGCCTCCGCTGACGGCGAAGGCCACCGCCACACCTTCGGCATCC
CCAGCCAGGTCGTCGTCTACGACGCCGCCGCGCTCGCCGACTCGGGCCTCCTCGCCGCGCTCCGCTTCCCGCTCATCGCC
AAGCCCCTCGTCGCCGACGGCAGCGCCAAGTCGCACAAGATGTCCCTCGTCTACCACCGAGAGGGGCTCCGCAAGCTCCG
CCCGCCGCTCGTCCTGCAGGAGTTCGTCAACCACGGGGGCGTCATCTTCAAGGTTTACGTCGTCGGCGGCCACGTCACCT
GCGTCAAGCGCCGCAGCCTACCGGACGTTTCCAAGGAGATCCTCGAGGACGCCGCCTCCGAGGGCACCATCTCCTTCTCG
CAGGTATCCAATCTCCCCAATCAGCGCACTGCCGAGGAGTACTACGAGGACATGCGGCTCGAGGACGCCGTCATGCCGCC
CACCGATTTCGTCAACGAGATCGCAGGCGGGCTCCGCCGTGCCCTGGGCCTGCAGCTCTTCAACTTCGACATGATCCGGG
ATGTTCGTGCCGGGGACCGGTATCTCGTCATTGACATCAACTACTTCCCCGGTTACGCGAAGATGCCCGGCTACGAGATT
GTCCTTACTGATTTCTTCTGGGATATGGTTCACAAGGACGACGTGGCCCTCAAGGAGGAGGAGGAGCAGAGCAATCATGC
TGTTGTGAAATGAGATGGATTTGCTAGGCATAGCTTGCTCGCAAACCTGCAATTCTTTCATGTCTGGGGGAAATGTGAGG
TGGCAGGATGGTTACAAGACTCGAGGGGAATAACAAGCAACCAATTAGGATGGGGAGATGGGGATTAACAGGTTCTGGAT
TTACTTGGGTTTCAACCAGCCGCAAGCGGAGGACCTGCAATGTAAATCCTCTCTCCTTGCTCCTGTCATACCGGTTGTTT
AGGTATCTTTCTGTTCTTCGTAATTTGCTTCACCCAGTTTAGTTAGAACAAAAGTGGGGGAACGGAAGCCAAGTTCTGAA
GAAGGTATATTTGTTCTGGATGTGCAAATCTTTTGTTCTTGATGAGTACTGGATGAATGGCAACCAAAC--CTTAGTGGT
ACTAA-ATGATGAATATGTTTCCAATGATACTGGAGGTCTG--AGTTTTATCACCTCCTCGAAAGAAAGGGGTTATGCAA
TTCTCTGAACTTTTAGCATTTGAAATGCAAACTTGAGTCAGCTCTGTCTGTGGCACTAGTTCTATCATCCAAAACTGAAT
TTTACATCTTTGATCAGAGTTAAATATGTACATGTACCTGCAATGATGTCATTTACCCTATGCTTGACTATCTGTTTTTG
AAATTTGGTTGACTGGAGAAACTCTTATTTGCACATATGATTATCCT---ATGTGAGCATGGATTCCTGCTTAATACTCC
ACTTTTTTATGGAGTAACATAATTTGAAGCGTTTGTAAGTTGCATGAGGGCAACCTTTCCACATATTCCTTCATAATTTG
AAAATTTTAACCTTGAGTGCACTTGCATGTTTTACTGGACTCTCTGCAACTTCAGATTATTGGCTGCATCATGGCATGTT
TTCCTTATAGCGATATTGTGATAGTGCCTTACTTTTCTTTAGAGTGTGAAAACAGCAGGGAAGAATTTGGCTGTTATCTT
TATCAGTTTCAGTTGAAAAAGTGAACAAGATAGCCATAAGTATTTTGCATTGCAACCATTCATTGCTTTATTTTACTTTA
TTTTTCGGCTGCTCTAACTTCATGTTCTGAATAATGACCTATTTTCCTTTACTAGAAATTTGTTCAGTTATTGGGAC-
>SNPs
---S--------S---------------------S----S-----------------------S---------S--S---
--------------S----------------------------S------------------------------------
S----------S--------S-------------------------------------------------------S---
--S-----------------S-----------S-------------------S---------------S-----------
------SS--------S------------------S---------------S----------------------S-----
------S------------------------S----------------------------------S-------------
------------------------------------S---SS-S-----S----S--------------S---SSS----
---------------S------S--------------------------S---S-S--------------S--S----S-
------SS-S----------S------SS--S---------SS-SS-----------SSSSSSSSSSSS----------S
SS--S-S-----S-S------S--------------S----S-------SS-------SS--------------------
--------S-----------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------------------------------------------S---------------------
------------S---S--------------------------------------------S------------------
--------------------------------------------------------------------------------
------------------S----------------S-------------------------------------------S
--------------S--------------------------------------------------S------------
>forward_74
------------------------------------------------------GTCCATGGATCACCTAGCGG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GCATCC
CTCCCCTTCCTTTA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_682
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TATGCATGCCCAGTCTCTCG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2299
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGGGGATCAACAGGTTCTGG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
