>input_sequence_56626
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----------------------------------------ATGGTGGCCGCC------TCCCCTTCCCCTTCGGCGGCGC
CGCCCGCCACCGACTCCGCCTCACCTTCGGCGGCCTCACCTTCGGCGTCGCCGCCCGCCACT---GCCGCCACCGCCTCC
GGCCGCCCCCACCCGTCCTACACCAAGGCAAGCTCCCTCCTTGTCCTCCTCTCCTCTCCATTAAAGGTTCTCTTCTCTCG
GTTCCTGCCTGCTGACGGGGAGCTGGATCTGGATCTGG----AACGCAGATGATTACGCAAGCGCTGACGGAGCTTGGGG
GCACCAGCGGCCGCGCAGCCATCGCCGGATTCATCTTGGGGCGCTTCACCGGCCTCCCCGCCGCCCAC------GACCAC
GACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGCCGCCGAGGGCGTCGTCCGCGGCTACGGATCGAAATCGAGAGCCTG
CTACGTCTTCCCCGCCTCCGACACGCGCGGACGCGGCCGACCACGCGACGCCGCAACTCGCCTCCCCAAGAATCATCTAA
ATTTGGATCATGACGACGACTCCCAGACGATTTGGCCGGCCCCATTCCCCTTGGCGACTTGTGTAAATCCAGATTGGGAT
CCCAATTCTGCT---------TCCAACCAGAATTCGGTTCCCAATCTGGATCTGGAT---GGATTCCAGAGTAACACCAG
------TGATGATGATGTGGCCTACAATGGTGAGCATGAGC------ATGATGATGAATACACTCCTCGGCCTGTGCCGG
CAGCAAAGCGCGGGCGCGGCCGTCCTCCTAAG------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------ATCAAGAGAGGGCGTGGGAG
GCCGAGAAAGGAGGAGCAACAATCACAG----------------------------------------------------
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---------------CAAGCAACAAAGCATCCTCCAACTCCAACC-----------------------------------
--------------------------------------------------------------------------------
-------GCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGTGGGAGACCAATGCTAGCTCCTACAACTGGACACGA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGCT-----------------
----------------------GAAGCTGGAGATGCAATGCCTGCTGAAACTGGAAGCGCTGCTTCTGCGGGAATCAAGA
GACCACGT--------GGGAGGCCAAGAAAGGAGAAGCCAGCAGCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGG
CCG----GGATCAAGAGAGGGCG----TGGGAGGCCAAGCAAGGAGAAGCCTGATTCTGCATC-----------------
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-------------------------------------------GGCCGG----GATCAAGAGAGGG----CGTGGGAGGC
CAAGAAAGGAGAAGCCTGATTCTGCATCGGCCGGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAGTATAATCCAGCAGCA
GCAGTATCAGCTGAAGATGGAGATGCTGTGTCAGCAGGAATG--------GCTTGA------------------------
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-------------------------
>chr1B_1_TraesCS1B01G480800
TTGCATTTGCTTCCAATCAACAAAAGAAACTCATAGGAATAAGCATTTGTTGCATGAAAACGTACATTAGCTTCACCGGG
GAAAAAGTTGAGCCAAGTCCTTTTAAAATCGAGTTCAAAAACGCCTATGATAAAGTCAAGTGGCCCTTTTTTCACAGATT
ATACGTATGGATGGATTGTCGCCGAATTGGTGCAAGCAGAGGTGAGAGGTTCAGTCTCTGGTGGTAGTGTAGGCATCAAG
GTCAAATAACGACGTTGGTAGCTACTTATAGGCTCAGAAGGGTCTTCGTCTATCCCTTATTTTGTTCCATAATTACATTG
TGGCAGATATGCTATCTTTTCTTGTTGGACGGGGCAAAAGTAGCCGACCAGATTACTGCCCCGTTTAAGATGGCTTTTCC
ATTCTACAATATGCAGATGAAACCATAATTTTTTATGTATCACGGCTTGAATAGAGCATGAAACCTCAAGGCATTATTGC
ATGGTTTCAAGGAGTTGTCTGGTGCTTAGATAATAAATTTCCATAAGAGAGAGCTTTCCCGCTTGCAAACCCGGCATCCG
AGTATGATGAGATCTTTGGCTGCCAATTCGGGCCATTTTCTGACTATGTATCTCGGTATTCCTATCCAATATTGGCAACT
AGAACTCGGTACAAATCACATGACATCAAGTTGATGAGCGAGGAAGAAATTCGTCGGCAAGAAACCCTAACCGCCACCTA
CTACGGGGCAGACCGGCGCGTTGAGTCATGTTTTTTTTGAAACAAAAAAGACATGGTGGTATTTTTTTTATTTTTTGAGA
TTTGGAAACATGGTGGTAAATTTGTTTTTTGAGGGGAGGCAAACATGGTTGTAAATTGTTTTTTAGAACCGAACATGATG
GTAAATGGAAAGCCCATGCCATGGCCCATGGATGATGAATCAATCCCCAATCCACTACACTACACTAGAAGAAAAAAAGA
ATCAATCCTCCCAGCACCGACCGGAAGCAGGGGAACCAAGATGGTGGCCGCC------TCCCCTTCCCCTTCGGCGGCGC
CGCCCGCCACCGACTCCGCCTCACCTTCGGCGGCCTCACCTTCGGCGTCGCCGCCCGCCACT---GCCGCCACCGCCTCC
GGCCGCCCCCACCCGTCCTACACCAAGGCAAGCTCCCTCCTTGTCCTCCTCTCCTCTCCATTAAAGGTTCTCTTCTCTCG
GTTCCTGCCTGCTGACGGGGAGCTGGATCTGGATCTGG----AACGCAGATGATTACGCAAGCGCTGACGGAGCTTGGGG
GCACCAGCGGCCGCGCAGCCATCGCCGGATTCATCTTGGGGCGCTTCACCGGCCTCCCCGCCGCCCAC------GACCAC
GACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGCCGCCGAGGGCGTCGTCCGCGGCTACGGATCGAAATCGAGAGCCTG
CTACGTCTTCCCCGCCTCCGACACGCGCGGACGCGGCCGACCACGCGACGCCGCAACTCGCCTCCCCAAGAATCATCTAA
ATTTGGATCATGACGACGACTCCCAGACGATTTGGCCGGCCCCATTCCCCTTGGCGACTTGTGTAAATCCAGATTGGGAT
CCCAATTCTGCT---------TCCAACCAGAATTCGGTTCCCAATCTGGATCTGGAT---GGATTCCAGAGTAACACCAG
------TGATGATGATGTGGCCTACAATGGTGAGCATGAGC------ATGATGATGAATACACTCCTCGGCCTGTGCCGG
CAGCAAAGCGCGGGCGCGGCCGTCCTCCTAAG------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------ATCAAGAGAGGGCGTGGGAG
GCCGAGAAAGGAGGAGCAACAATCACAG----------------------------------------------------
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---------------CAAGCAACAAAGCATCCTCCAACTCCAACC-----------------------------------
--------------------------------------------------------------------------------
-------GCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGTGGGAGACCAATGCTAGCTCCTACAACTGGACACGA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGCT-----------------
----------------------GAAGCTGGAGATGCAATGCCTGCTGAAACTGGAAGCGCTGCTTCTGCGGGAATCAAGA
GACCACGT--------GGGAGGCCAAGAAAGGAGAAGCCAGCAGCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGG
CCG----GGATCAAGAGAGGGCG----TGGGAGGCCAAGCAAGGAGAAGCCTGATTCTGCATC-----------------
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-------------------------------------------GGCCGG----GATCAAGAGAGGG----CGTGGGAGGC
CAAGAAAGGAGAAGCCTGATTCTGCATCGGCCGGGATCAAGAGAGGGCGTGGGAGGCCAAGAAAGTATAATCCAGCAGCA
GCAGTATCAGCTGAAGATGGAGATGCTGTGTCAGCAGGAATG--------GCTTGAGAA---------------------
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------------------------------------------TCCAATTCCAAGACCATCAGCCTGCCTGT----GATAT
TGTGTCGATGGTGATGAATAGAGAGTGCTGGCCTGCCTTTGAAACCTGGTTTGGAGACATGACAGAAGCTAGTCGTCGT-
-------AAACAACAAGAGGA---------------------------GGTTGAAGAAGAAAAAGTCTTTGGAACTGGG-
----TCT-----GGTGGGATGTTTGCAAACAACAAGAGGAGG--------------------------------------
----------TTGAAGACGC----TGGATGCGTACCGGTTTCTGTAGAGAATGC-----TGCTCCTGTCGAG----GCTG
TAGTAGGTAGGTGTGATTTTAGTCTAATCTGGGCATGACACAGTGAGTGCTCGGTCGGTTGATGCT--TGTACATTCTTG
TTTGCTAAATCTTAGTCTCCTTAGTTATTATTTCTGGTGTCAAATTCATATCACATACTGTACTTATATAGTACC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TACTAGATTCTCTA----TTTCCCGTTAAGTTCTTTTATTTATGTGTTTTTTTGTTCCGGAGTTTCTTTACTACCTGTAA
GTTGG-------------------------GGATTGGTTTTCTGTGTGGGCGTTGCA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTTTTCTT
TCTGATTGGGCTACTTGGTTTCTGTTGGCTTGGGGACCTGGCGGGGTATGGCCGT--------CATCTGTTGGTCTTTTC
TCCACAGCGCTCTCCCCCAT----------AT------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CCATGGTGCTGTCTCGGAGGCTCTCCATGGTACAATTCT
GTGCAACCGTCTACCGCCATGTGAGTTCTGTTCAACCTTGCGCTGACTTACTTGTTCTTTGTGCTTAGACTTTGTGACAT
GAAGGATCTTCTCACATTGTTGATGGGATATATATATATAGCTGTTGTGTTTTGTTGCTGATTGAATGTTCGATTTAGTT
GGGAACCAAGATTGGGTTTCTTTCCAATTAATCATGTACACCCTCTGTTCCTAAACAGAGTTGGTACGTCCTAATTAATC
AGTGTGATTAATTGAAAGAGAAATACTGTATGCTGGTGGCACATAACATACAACTATATCCATGCTTGATTGCCTATTCA
ATAATGTCTTTTTTCTGAAATTTAT
>chr1D_983
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----------------------GGAAGCTGGGGAACCAAGATGGTGGCAGCCTCCCCTTCCCCTTCCCCTTCGGCAGCGC
CGCCCGCCACCCCCGACAGC------------GCCTCCCCTTCGGCGGCACCGCCCGCCAGCACCGCCGCCGCCGCCGCC
GGACGACCCCACCCGAGCTACACCAAGGCAAGCTCCCTCCTTCTCTCCCTCTCCGGTC-----AAGGTTCTCTCAGTTTT
TG-CCTGCCTGCTGATGGGGAGCTCATCGAGATCTGGAACGCAACGCAGATGATTACGCAAGCGCTGGCGGAGCTGGGGG
GCACCTCCGGCCGCGCGGCCATCGCCGGATTCATCTTGGGGCGCTTCACCGGCCTCCCCGCCACCCACGACCATGACCAC
GACGCGCTCCTCTCCGCCCACCTCCGCCGCCTCGTCGCCGAGGGCGTCGTCCACATCTACGGATCAGAATTGAGAGCGTG
CTACGTCTTCCCCGCCTCCAACACGCGCGGACATGGCCGCCCCCGCAACGCCGCAACTCGCCTCCCCAAGAAAGATCTAA
ATTTGGATT-------------------------------CCC------CTTGGCGAGTTGCGTAAATCCAGATTGGGAT
CCTAATTCTGCT---------TCCAGATCCCAGCCCCAGCCCCAGCAGAATTCTGCTTCCGGATTCCAGAGTAACACCAG
CGAGGATGATGATGTTGTTGCCTACAGTGCTGAGCATGATGATAATGATGATGATGAATACACTCCTCGGCGTGTTCCT-
-----------------GGCCGTCCTTGTAAGGTTAACCCGTCTGCGAATGGAGATGCTTCCTCACTGACCAAGCGAGGC
CGTGGGAGACCAAGGAAGCTACAGAAAGATGGTCCGTCCCCCTCCCCCTCCCCGGGAGGCGATCCGTCAACCGGTGGTGT
CAAGAGAGGGCGTGGGAGGCCGAGAAAATCACAAGAAGCAAAGCATCCTCCAACTCCAGCTACGTCGTCAACCAACCGGT
GGCATGCAACAATCAGAAGCAGCAGCAGAGCCTCGTAAGGTTACCCTCTCCGCGAATGAAGATGCTTCCTCCGCATCGAC
CAAGAGAGGCCGTGGGAGACCAAGGAAGATACCAACAAGGTGTGGGA-----GGCCGAGAAAGGAGGAGGAGCAACAATC
ACAAGAAGCAAAGCATCCT-------CCAACTCCAACCGCGTCGTCAACTGGTGA-------------------------
--------AGCAGCAGCAGAGCCTCCTCCAACTCCATT------GTCAACTGGTGGTATCATCAAGAGAGGGCGTGGGAG
GCCGAGAAAGGAGGAGCAACAATGCCTTCTCCAACTCCACCTGCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGCGGGAG
ACCAATGCTAGCTCCTACATCTCATCTGGAGACACACGGAGGGCCTCCGAGGCCAATAATAATAGAGAATCGGCTACCAC
CAGCAAGGTGGTCTGTCGATCCTCCTGCTGCATCTGCATCGCCACGAGTCAAGAGACCGCGTGGGAGGCCAAGAATGTAC
AGGCCAATGCCCGTCAAAACTGGAGATGAACTTGAGAATCCAAGAATGCACAAGCCATCAGCAGGTGATATTGTGTCCAT
GGTGATGAAGAGAGGGTGCGGGAGCGGGAGGGAGGCTAAGGACAGAGCAGCTGGACTTTAAAACGGAAATGCCAATGCCT
GCTGAAGCTGGAGATGCAATGCCTGCTGAAACTGGAGGCGCTGCTTTAGCGGGAATCAAGAGAGAGACCACGTGGGAGGG
AGGCCAAGAAAGGAGAAGCCAGCAGCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGGCCGACCGGGATCAAGAGAG
GGCATACATGGGAGGCCAAGAAAGGAGAAGCCTGATTCTGCATCGGCGGGGATCAAGAGGGGCGTGAGAGGCCAAGAAAG
TATAATCCAGCAGCAGCTGAAGATGGAGATGGAGAACGAGAATGAAGGGACCGCTTGAGAAGAGAATCCAATTCCAAGAC
CATCAGCCCGTGATATATATTGTGTCGATGGTGATGAATAGAGAGTGCGGGCCGGGCTTTGAAACCTGGTTTGGAGACAT
GACAGAAGCTAGTCGTCGTCCCCAAACAACAAGTGGAGGAGGGAGGGGAGAAAACCAGGCCTAGGGTTGAAGAAGAAAAA
GTCTTTGGAACTGGGTCTCGTCTGGTGGGATGTTTGCAAACAACAGAGCGAAGAAGAAGAATATGCCGTAGGTTCGGGGG
ACAAGAAGGAAACCAGACTTGAAGACGCTGGATGCGCACCGGTTTATGTAGAGAATGCCGAGGCCGTGGGAGACCAAGGA
AGCTACACAAAGATGGGCCGTCCCCATCTCCATCAACTGGTGGTATCATCAAGAGATGGCGTGGGAGGCCGAGAAAGGAG
GAGGACCAACAATCACAAGCAGCAAAGCATCCTCCAACTCCAACCGTGTCAACTGGTGAAGCAGCAGCAGAGCCTCCCCC
AACTCCATTGTCAACTGGTGGTATCATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGAGCAACAATGCCTCCTCCAAC
TCCACCTGCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGCGGGAGACCAATGCTAGCTCCTACATCTCATCTGGAGACAC
ACGGAGGGCCTCC---------GAGGCCAATGATAATAGAGAATCGGCTACCACCAGCAAGGTGGTCTGTCGATCCTCCT
GCTGCATCTGCATCGCCACGAGTTAAGAGACCGCGTGGGAGGCCAAGAATGTACAGGCCAATGCCCGTCAAAACTGGAGA
TGAACTTGAGAATCCAAGAATGCACAAGCCATCAGCAGGTGATATTGTGTCCATGGTGATGAAGAGAGGGTGCGGGAGCG
GGAGGGAGGCTAAGGACAGAGCAGCTG------GACTTTAAAACGGAAATGCCAATGCCTGCT-----------------
----------------------GAAGCTGGAGATGCAATGCCTGCTGAAACTGGAGGCGCTGCTTTAGCGGGAATCAAGA
GAGAGACCACGTGGGAGGGAGGCCAAGAAAGGAGAAGCCAGCAGCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGG
CCGACCGGGATCAAGAGAGGGCATACATGGGAGGCCAAGAAAGGAGAAGCCTGATTCTGCATCGGCGGGGATCAAGAGGG
GCGTGAGAGGCCAAGAAAGTATAATCCAGCAGCAGTTGAAGATGGAGATGGAGAACGAGAATGAAGGGACCGCTTGAGAA
GAGAATCCAATTCCAAGACCATCAGCCCGTGATATATATTGTGTCGATGGTGATGAATAGAGAGTGCGGGCCAGGCTTTG
AAACCTGGTTTGGAGACATGACAGAAGCTAGTCGTCGTCCCCAAACAACAAGTGGAGGAGGGAGGGGAGAAAACCAGGCC
TAGGGTTGAAGAAGAAAAAGTCTTTGGAACTGGGTCTCGTCTGGTGGGATGTTTGCAAACAACAGAGCGAAGAAGAAGAA
TATGCCGTAGGTTCGGGGGACAAGAAGGAAACCAGACTTGAAGACGCTGGATGCGCACCGGTTTATGTAGAGAATGCCGA
GGCCGTGGGAGACCAAGGAAGCTACACAAAGATGGGCCGTCCCCATCTCCATCAACTGGTGGTATCATCAAGAGATGGCG
TGGGAGGCCGAGAAAGGAGGAGGACCAACAATCACAAGCAGCAAAGCATCCTCCAACTCCAACCGTGTCAACTGGTGAAG
CAGCAGCAGAGCCTCCCCCAACTCCATTGTCAACTGGTGGTATCATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGAG
CAACAATGCCTCCTCCAACTCCACCTGCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGCGGGAGACCAATGCTAGCTCCT
ACATCTCATCTGGAGACACACGGAGGGCCTCCGAGGCCAATGATAATAGAGAATCGGCTACCACCAGCAAGGTGGTCTGT
CGATCCTCCTGCTGCATCTGCATCGCCACGAGTTAAGAGACCGCGTGGGAGGCCAAGAATGTACAGGCCAATGCCCGTCA
AAACTGGAGATGAACTTGAGAATCCAAGAATGCACAAGCCATCAGCAGGTGATATTGTGTCCATGGTGATGAAGAGAGGG
TGCGGGAGCGGGAGGGAGGCTAAGGACAGAGCAGCTGGACTTTAAAACGGAAATGCCAATGCCTGCTGAAGCTGGAGATG
CAATGCCTGCTGAAACTGGAGGCGCTGCTTTAGCGGGAATCAAGAGAGAGACCACGTGGGAGGGAGGCCAAGAAAGGAGA
AGCCAGCAGCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGGCCGACCGGGATCAAGAGAGGGCATACATGGGAGGC
CAAGAAAGGAGAAGCCTGATTCTGCATCGGCGGGGATCAAGAG-GGGCGTGAGAGGCCAAGAAAGTATAATCCAGCAGCA
GC---------TGAAGATGGAGATGGAG----AACGGGAATGAAGGGACCGCTTGAGAAGAGAATCCAATTCCAAGACCA
TCAGCCCGTGATATATATTGTGTCGATGGTGATGAATAGAGAGTGCGGGCCGGGCTTTGAAACCTGGTTTGGAGACATGA
CAGAAGCTAGTCGTCGTCCCCAAACAACAAGTGGAGGAGGGAGGGGAGAAAACCAGGCCTAGGGTTGAAGAAGAAAAAGT
CTTTGGAACTGGGTCTCGTCTGGTGGGATGTTTGCAAACAACAGAGCGAAGAAGAAGAATATGCCGTAGGTTCGGGGGAC
AAGAAGGAAACCAGACTTGAAGACGCTGGATGCGCACCGGTTTATGTAGAGAATGCCGAGGCCGTGGGAGACCAAGGAAG
CTACACAAAGATGGGCCGTCCCCATCTCCATCAACTGGTGGTATCATCAAGAGATGGCGTGGGAGGCCGAGAAAGGAGGA
GGACCAACAATCACAAGCAGCAAAGCATCCTCCAACTCCAACCGTGTCAACTGGTGAAGCAGCAGCAGAGCCTCCCCCAA
CTCCATTGTCAACTGGTGGTATCATCAAGAGAGGGCGTGGGAGGCCGAGAAAGGAGGAGCAACAATCGGAAGCAACAATG
CCTCCTCCAACTCCACCTGCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGCGGGAGACCAATGCTAGCTCCTACATCTCA
TCTGGAGACACACGGAGGGCCTCCGAGGCCAATGATAATAGAGAATCGGCTACCACCAGCAAGGTGGTCTGTCGATCCTC
CTGCTGCATCTGCATCGCCACGAGTTAAGAGACCGCGTGGGAGGCCAAGAATGTACAGGCCAATGCCCGTCAAAACTGGA
GATGAACTTGAGAATCCAAGAATGCACAAGCCATCAGCAGGTGATATTGTGTCCATGGTGATGAAGAGAGGGTGCGGGAG
CGGGAGGGAGGCTAAGGACAGAGCAGCTGGACTTTAAAACGGAAATGCCAATGCCTGCTGAAGCTGGAGATGCAATGCCT
GCTGAAACTGGAGGCGCTGCTTTAGCGGGAATCAAGAGAGAGACCACGTGGGAGGGAGGCCAAGAAAGGAGAAGCCAGCA
GCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGGCCGACCGGGATCAAGAGAGGGCATACATGGGAGGCCAAGAAAG
GAGAAGCCTGATTCTGCATCGGCGGGGATCAAGAGGGGCGTGAGAGGCCAAGAAAGTATAATCCAGCAGCAGCTGAAGAT
GGAGATGGAGAACGGGAATGAAGGGACCGCTTGAGAAGAGAATCCAATTCCAAGACCATCA----GCCCGTGATATATAT
TGTGTCGATGGTGATGAATAGAGAGTGCGGGCCGGGCTTTGAAACCTGGTTTGGAGACATGACAGAAGCTAGTCGTCGTC
CCC----AAACAACAAGTGGAGGAGGGAGGGGAGAAAACCAGGCCTAGGGTTGAAGAAGAAAAAGTCTTTGGAACTGGG-
----TCTCGTCTGGTGGGATGTTTGCAAACAACAGAGCGAAGAAGAAGAAT---ATGCCGTAGGTTCGGGGGACAAGAAG
GAAACCAGACTTGAAGACGC----TGGATGCGCACCGGTTTATGTAGAGAATGC-----CGAGGCCGTGGGAGACCAAGG
AAGCTACACAAAGATGGGCCGTCCCCATCTCCATCAACTGGTGGTATCATCAAGAGATGGCGTGGGAGGCCGAGAAAGGA
GGAGGACCAACAATCACAAGCAGCAAAGCATCCTCCAACTCCAACCGTGTCAACTGGTGAAGCAGCAGCAGAGC------
--------------------------------------------------------------------------------
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-----------CTCCCCCAA----------CT------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CCATTGTCAACTGGTGGTATCATCAAGAGAGGGCGTGGG
AGGCCGAGAAAGGAGGAGCAACAATCGGAAGCAACAATGCCTCCTCCAACTCCACCTGCGTCGTCAAGGTGGGGGTTCAA
GCTAGGGTGCGGGAGACCAATGCTAGCTCCTACATCT-------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr1A_1248
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------------------------------------------------------------AGCGCTGGCGGAGCTGGGGG
GGGGGGGGCACCT-GCGGCCATCGCCGAATTCATCTTGGGGCGCTTCACCGGCCTCCCTGCCACCCAC------GACCAC
GACGCGCTCCTCGCCATCCACCTCCGCCGCCTTGTCGCCGAGGGCGTCGTCCGCATCTACGGATCAGAATTGAGAGCCTG
CTACGTCTTCCCCGCCTCCAACACGTGCGGGCGTGGACGGCCACGCAAGGCCGCAACTCGCCTCCCCAAGAATCTAAATT
TG---------GACGACGACGACGAGACGATTTCGCCGCCCCC------CTTGGCTAGTTGCGTAAATCCAGATTGGGAT
CCCAATTCTGTTTCCGGAATATCCCACCAGAATTCGGTTCCCAATCTGGAT---------GGATTCCAGAGTAACACCAG
CGAGGATGATGATGTTGTTGCCTACAGTGGTGAGCATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG
ATGAATAATACAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCCTCCCCATTCAC
CAAGCGAGGCCGTGGGAGACCTCTCCATCAACTGGTGGTACCCTCAAGAGAGGGCCGACCAAGGAGGAGGAGCAACAATC
ACAAGCAGCAGCAGCAACAGATCCTCCCAACTCCAACCGCGTCGTCAACTGGTGGCATCAAGAGAGGGCAACAATCACTA
CAAGCAGCAGCAGCAGCAGAGCCTCCTCCAACTCCGTCCGTGTCGTCAACCGGTGG---CATCAAGAGAGGGCGTGGGAG
GCCGAGAAAGGAGGAACAACAGTCTG------------------------------------------------------
--------------------------------------------------------------------------------
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----------------AAGCAACAAAGCCTCCTCCAACTCCACCT-----------------------------------
--------------------------------------------------------------------------------
-------GCGTCGTCAAGGTGGGGGTTCAAGCTAGGGTGTGGGAGACCAATGCTACCTCCAACATCTCATCTGGAGATAC
ATGGAGGGCCTCCCAGGAGTTGGAGGCCAATTATAATAGAGAATCAGCTACCACCAGCAAGGTGGTCTGTCGATCCTCCT
GCTGCATC------GCCACGAATCAAGAGACCGCGTGGGAGGCCAGGAATGTACAGG-----------------------
------------------------------------AGGTGATATTGTGTCCATGGTGATGAAGAGAGGGTGCGGGAGC-
---GGGAGGCTAAGGACAGAGCAGCTGCAGCTGGACTTTGAAACGGAAATGCCAGCAGCACCAATGCCTGCTAAAGAAGC
TGGAGATGCAGCGCCTGCTAAAGAAGCTGGAGATGCAACGCCTGCTGAAACTGGAGGCGCTGCTTCAGCGGGAATCAAGA
GACCACGT--------GGGAGGCCAAGAAAAGAGAAGCCAGCAGCAGCA-------------------------------
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--------GCAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGGCCGG----GACCAAGAGAGGG----CGTGGGAGGC
CAAGAAAGGAGAAGCCTGATTCTGCATCGGCGGGGATCAAGAGGGGGCGTGAGAGGCCAAGAAAGTATAATCCAGCA---
------TCAGCTGAAGATGGAGATGCTGTGTCAACGGGAATGAAGGGGCCGCTTGAGAA---------------------
--------------------------------------------------------------------------------
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------------------------------------------TCCAATTCGAAGACCATCG----GCCTGT----TATAT
TGTGTCGATGGTGATGAATAGAGAGTGCGGGCCGGCCTTTGAAACCTGGTTTGGAGACATGACAGAAGCTAGTCGTGGT-
-------AAACAACAAGTGGAAGAGGGAGGGGACAAAACCAGGCCTAGGGTTGAAGAAGAAAAAGTCTTTGGAACTGGG-
----TCT-----GGTGGGATGTTCGCAAACAAGAGAGCAAAGAAGAAGA-------------------------------
-----------------CGC----GGGATGCGTACCGGTTTCTGTAGAGATTGCTTTGCTGCTCCTATCGAG----GCTG
TACATG------------------------------------------------------------------CATGCTTG
TTTGCTAAATCTTAGTCTCCTTAGTTATTATTTCTGGTGTCAAATTCATATCACATACTAGTACTCCCTCCGTTTTTATT
TAGTTCGCGTATTAACTTTGGTCAAAGTCAAGCTTTGTAAACTTTGACTAAGTTTATAAATAAAAATATTAACATATACA
ATAACAACCTAATATCATTAGATCCATTATTGAATGTACTTTTACATCATATAGATTTGTTATGATAAATGTTTATGTTG
TTTTCTATAAATTTGGTCAAACTTTACGAAATTTGACTTCAGTCAACTCTAATATACAGAGTAAATAAAAACGCAGGGAG
TACTAGATTCTCTA----TTTCCCGTTAAGTTCTTTTATG---------TGTTTTTCTGGAGCTTCTTTACTACGTTTTA
AGTG-----ATTAATCAATGGTTGTCAGGTGTATTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATTTTCCTT
TCTGATTGGGCTCCTTGGTTTCTGTCGGCTTGGGGACTCGTGTGTGCCTTGTGACTTTCTAGGCATCTATAGGTCTTTTC
TGCACCGCGCTCTCCCCCAT----------ATGGTGACGCCGGTCTTCATGATGATGTCTTTGTTTTTACAGAAAAACTA
TAAAGGAGGCCTCTAAAATATAATTGGTGCAACAAATCTAAATTGCAAATATCATGCCTTAAACCTAGGTGGGTGGGAAG
GCATCAACCCCTTTCCATCACTAGGCTATGCCTTATTCTACCCATAGTGCTGTCTTGAAGGCTCCC----GTACAATTCC
GTGCAACCTTCTAGCGCCATGTGAGTTCTGTTCAACCTTGCG-TGAGTTACTTGGTTTGCGTACTTAGACTTTGTTACAT
TG--------------TTGATGG-------------GATAGCAGTTCTTTTCTGTTACTGATTGATTCTTGGATTTAGTT
GGGAACCAAGATTGGGTTTCTTTCCAAT----CATGTACACCCTCTGTTCCTAAACAGAG--------------------
--------------------------------------------------------------------------------
-------------------------
>chr1D_1896
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-----------------------------------------------------------TGCT-----------------
----------------------GAAGCTGGAGATGCAATGCCTGCTGAAACTGGAGGCGCTGCTTTAGCGGGAATCAAGA
GAGAGACCACGTGGGAGGGAGGCCAAGAAAGGAGAAGCCAGCAG------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------CAGCAATGTCTGCTCAAGCTGGGGATGCTGCGTCGGCCGGCCGGGATCAAGAGAGGGCGTACGTGGGAGGC
CAAGAAAGGAGAAGCCTGATTCTGCATCGGCGGGGATCAAGAGGGGGCGTGAGAGGCCAAGAAAGTATAATCCAGCAGCA
GC---------TGAAGATGGAGATGGAG----AACGGGAATGAAGGGACCGCTTGAGAA---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------GAGAATCCAATTCCAAGACCATCA----GCCCGTGATATATAT
TGTGTCGATGGTGATGAATAGAGAGTGCGGGCCGGGCTTTGAA------------------ACCGAAGCTAGTCGTCGTC
CCCAAACAAACAACAAGTGGAGGAGGGAGGGGAGGAAACCAGGCCTAGGGTTGAAGAAGAAAAAGTCTTTGGAACTGGGA
CCCGTCT-----GGTGGGATGTTTGCAAACAACAGAGCGAAGAAGAAGAAGAAGATGCCGTAGGTTCGGGGGACAAGAAG
GAAACCAGACTTGAAGACGCTGGATGGATGCGCACCGGTTTCTGTAGAGAATGC-----CGCTCCTGTCGAGGCTAGCTG
TAGTAGGTAGGTGTGATTTTGGTCTAAT----------CACAGTGAGTGCTCGGTTGATGCTTGTAGCTGTACATGCTTG
TTTGCTAAATCTTAGTTGCCTTGGTTATTATTTCTGGTGTCAAATTCATATCACATACTCC---TATATAGTACT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
TACTAGATTCTCTCTCTGTTTCCCGTTAAGTTCTTTTATTTATGTGTT----------GGAGTTTCTTTACTACTAACTG
TTAGTGATTATTAATCATTGGTTGACACGTGTATTAGTTGGGGATGTGGGGGGTATG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTTTCCTT
TCTCATTGGGCTACTTGGTTTCTGTCGGCTTGGGGAGCTGGCCGTCG--TGTGATTTTCTTGGCATCTGTTGGGCTTTTC
TCCACCGCGCTCTCCCCCATGCATATGGATATGGCGACGCCGCTAGCTCTCCATGGTG----------------------
--------------------------------------------------------------------------------
-------------------------------------------ATGGTGCTGTCTCAAAGGCTCCTTCTC----------
-----------------------------------------------------------------TAGACTTTGTGACAT
GAAGGATCTTCTCACATTGTTGA-------------TATAGCACTTCTTTTATGTTACTGATTAATTGTTCGATTTAGTT
GGGAACCAAGATTGGGTTTCTTTCCAAT----CATCTACACCCTCTGCTCCTAAACAGAGTTGGTACGTACTAATTAATC
--------------------------------------------------------------------------------
-------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS------S-------------------S--------------------------S----
-----------SS-SS-SS-SSSSSSSSSSSS-----S---------S-S----------SS---------S-----S--
--S--S---------SS-------------------------S--SS-------SS--SSSSS----------SSSS-SS
SSS------------S--------SSSSSS-SSSSS-S-----------------------------S-------S----
-----S----------S---------------------------------------------S-----------------
----------------------------------S-------------------SS---------SS---S---------
-------------------S-------------S-----S------S---------------------------------
--------SSS---------SS-S---------S----S----SSSSSS--------S---S------------------
---------------------------------------------------SSS-S------------------------
--------------S---S-------S------------SS------------------------------S---S--S-
SS-S-S-SSS-SSSSSS---------SS----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-SS----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S--SSS-SS-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S----------S-------------
--------------------------------------------------------------------------------
----------------------S----------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S-----------S-------S----------------------------
--SSSS---------------------------S-S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------SSSS----------S----
----------------------------S----S----------------------------------------------
-----------------S--------------------------------------------------------------
----------------------------------SSSS--S---------------------------------------
--------------------------------------------------------------------------------
--------------------S---------SSSSSSSS-----------------S-S-SSS--SS---------S----
-----------------------------------------------------------SSS-S----------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-S--S---S----------------S-S-S-
S---S--------------------------S---S---SSSSS------S-S-SSS-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------S----------------S-S-SS-S-SSS--------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S-SS-----------S
--------S----S----------------------------------------S-S-SS--------------------
------------------------S-SSSS--S--S------S---S-S--S----S--------S--------------
----------------------------SSSS-------------------------------------S----------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CTTGTTGGACGGGGCAAAAG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_4067
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------TGCGGGAATCAAGA
GACCAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>forward_1544
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGATCATGACGACGACTCCC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_7723
--------------------------------------------------------------------------------
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------------------------------------------TGTGTGGGCGTTGCATTTTT------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
