>input_sequence_56625
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AGTACTAACCAAAGGATTTCTCAGAGC
CATACCACACCAGATAATTCAGAGATCAGAAGAAATGGAGGCGGTAGAATGTGCATCTTGTTGGGGTTCTCTGGATACAA
TCTGCGAGGAGTCGGAGATGATTGCCCATTTGCAGTCAGTGCTCTGGTGCGACAGTGATTCTGATGCAAACCTCTGCTCC
TCCAAAAATGATAGCACAAATGCATCTCGTGATCTCCAAGTGGATGACCTCGGTTCAGCGAATGAGAGGAACACCGGTAT
CAAGAGAAAGATGCAAGTGGATGAACAGAGCGAGCATCACAATGAAGTCCCTATGGCTCTCTCGGTAAGTGAAGTCCTAC
ATTTCGTCCATTTTGACATTA----TAATTCTACTCCTTTACTTT----------------TTGATTCTATAGGCCGCTA
GGAAGAGTGGTTACAAGTCAAGAGCTTCAATGGACTCACAAAGCAACTATGCAAAGGTTTGATAGTCACCTACATGCTAT
TAGCTTCGTTTCCCTTTAGGGGAATCTCT---------------------------------------------------
--------------------------------------------TATCAAACATTTTATCACAATGTGCAATTTTGTAAC
AGAGAAGAAGGCATAAGATCAATGAGAGACTGAGAGTTCTGCAACATCTGATTCCTAATGGCACAAAGGTGAGTTCTTAC
TATTTGCCATTCATTGTTCATTTGCACCTGCCAATGCTAATTGTGTTGATCGTTTGCTTTTTCAGGTTGACATCAGCACA
ATGTTGGAGGAAGCAGTCCAGTATGTCAAGTTTCTGCATCTGCAGATCAAGGTATGTATTCACTTATGAGAAG-----CA
ACAGATGAACAAATGTTTCAATTGTCAATGCGCAAGTGCGTGCA-CTTACTTCTTCT-ATCTTTTTGATGTATAGCTCTT
GAGCTCCGATGAAATGTGGATGTACGCTCCCCTCGCCTATGGCGGCGTCAACGTCAGCCT-CCCTCATCTGGATTCTCTG
GCTCATGAATGACTACCCCAAACAAA---CCGACTCAGCGGATGGTACAAAATTTGTTGGAAGGACCCGTGGCTCAACTG
TTCTGATTCATGTGTCAT-----------CTGTCGGGTGGACTTCACCTGAG--TTCCATTTTATTGAGTACTGTAGCTC
CTTATTCAGGATTACATAAC-TTTTATTCTTGATTGCTTTAACAGTGTAAATAATAAGATTTATTTTAAACAGGGCTTGT
TGTATATTGATTTTAATTTTGAATTGAAACAAAATCAAGAGTGGCAATGTATATAACTTCTTCTTTAGAAAAAA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr1B_1_TraesCS1B01G359000
AGGGAAAACAAACAGCATGGCAAAGTGCGCCTTTGCTTCTAGTACAATTCCAATCCACAATCACGGAAATTGTCTTATAA
AATCAGGGAGGCTT-TCCTTGATGCACTGCAAGACATTTCCTTC------------------------------------
----------------------------TTTTCTTCCCCGCATGTGTCACAAAGTCCGTAAATTCAGGATAATTACGAGC
ATCAAGACTTGAACCCTGGTGGGCTTGGAATAAATGCGAGCACCAAGACTTGATGCATTGCAAGACACTTTCTTCTTTTC
TTCCCCGCATGTGTCACAAAGTCACCGTAAATTCAGGATAAATGCGAGCAACAAGACTTGAACCCTGGTAGGCTGGGAAT
ATCACTCTTCACCTAACCATTTCAACCACAGGTTGGTTCGCATTACCTTACGGTGTTGGA-AGGTACAGCTCTTAGATAT
TTTCTAATTTAATAATAATATTAATTTTCTTTTTCATCTATAAGTGCCTAGTCAGGCACCTGGCGTTGTAGATGGCCTTA
AAATCCTG-ACAGAAACCAAATCCATCTCCTTCCACGGGTAAAAAGTCAGTTCATATCTATGCGCTTCAGGACTGCTGCA
TGATCTGCACCGTCCTGACCAATTGGATTCGTCTGACCTTGTGATAAAAAACTACTCCGTAGCTGGCATCGCAATATAAG
ACATAAAAGCTGAACTGTGGCGTCATGATTCACGCGATACACCAAAGTTCCATTAGTCTGCGCTGCTGCTGCTGTGGCTG
TTGCCTCCTAATTGTGATCCATAATCATCGCTGACTAATCC--ACTACTT---ATTCATGCACCACACCAAGTA---TAT
TCTGCACCATAGCATTTATGGCTTCCCAGC---GCTACCACTTCCCAACACGTTGAATCAAATATTGTCTA---------
-----CTCACAATATGTTCCTGCATTTTCATTCTTGAAACATTGTTGTTAATC-TAAGTCAAATCCATATGATGTCAATA
ACAAAGACTTTCAGCTCCTCGGGGTATATATAAACGCGCTGCTAGGTACGCTCAGTACTAACCAAAGGATTTCTCAGAGC
CATACCACACCAGATAATTCAGAGATCAGAAGAAATGGAGGCGGTAGAATGTGCATCTTGTTGGGGTTCTCTGGATACAA
TCTGCGAGGAGTCGGAGATGATTGCCCATTTGCAGTCAGTGCTCTGGTGCGACAGTGATTCTGATGCAAACCTCTGCTCC
TCCAAAAATGATAGCACAAATGCATCTCGTGATCTCCAAGTGGATGACCTCGGTTCAGCGAATGAGAGGAACACCGGTAT
CAAGAGAAAGATGCAAGTGGATGAACAGAGCGAGCATCACAATGAAGTCCCTATGGCTCTCTCGGTAAGTGAAGTCCTAC
ATTTCGTCCATTTTGACATTA----TAATTCTACTCCTTTACTTT----------------TTGATTCTATAGGCCGCTA
GGAAGAGTGGTTACAAGTCAAGAGCTTCAATGGACTCACAAAGCAACTATGCAAAGGTTTGATAGTCACCTACATGCTAT
TAGCTTCGTTTCCCTTTAGGGGAATCTCT---------------------------------------------------
--------------------------------------------TATCAAACATTTTATCACAATGTGCAATTTTGTAAC
AGAGAAGAAGGCATAAGATCAATGAGAGACTGAGAGTTCTGCAACATCTGATTCCTAATGGCACAAAGGTGAGTTCTTAC
TATTTGCCATTCATTGTTCATTTGCACCTGCCAATGCTAATTGTGTTGATCGTTTGCTTTTTCAGGTTGACATCAGCACA
ATGTTGGAGGAAGCAGTCCAGTATGTCAAGTTTCTGCATCTGCAGATCAAGGTATGTATTCACTTATGAGAAG-----CA
ACAGATGAACAAATGTTTCAATTGTCAATGCGCAAGTGCGTGCA-CTTACTTCTTCT-ATCTTTTTGATGTATAGCTCTT
GAGCTCCGATGAAATGTGGATGTACGCTCCCCTCGCCTATGGCGGCGTCAACGTCAGCCT-CCCTCATCTGGATTCTCTG
GCTCATGAATGACTACCCCAAACAAA---CCGACTCAGCGGATGGTACAAAATTTGTTGGAAGGACCCGTGGCTCAACTG
TTCTGATTCATGTGTCAT-----------CTGTCGGGTGGACTTCACCTGAG--TTCCATTTTATTGAGTACTGTAGCTC
CTTATTCAGGATTACATAAC-TTTTATTCTTGATTGCTTTAACAGTGTAAATAATAAGATTTATTTTAAACAGGGCTTGT
TGTATATTGATTTTAATTTTGAATTGAAACAAAATCAAGAGTGGCAATGTATATAACTTCTTCTTTAGAAAAAAACAGGT
AGCTTTGCCCTTTACTACTTCCACACAATCGGCCAATTAACGCATCCACCCAAAGGATAAATCAAGAAATATAAATAATA
TGCGATATAATAGTGTCTTCTACTACCTCTGTCCCATAATAAGAGCGTTTTTTACGAGTATGTTGTAGTGTAGTGACTAC
CGAATGTATTATCTTTCTTGAAATAGGCTTTCGCCCCGCTG------TATTAATATAGCAACCACACGATACAACATGAG
AACCATTGTTGGGGCAA-CAACACATTTGCGCCCAGAAGAAAAGAAAGAGAAAACAATGCCGACACCAGCGGATCAACGA
AAACGAAAATGACTCGCAGCCACTGCGTCCTCTCCGAAGTATTCCCACCATGATCCTAGCACTA--ATTCACCGCGTACC
AAGCAGCACCTCCAAGAAGGACAGT---GACGACAACGATTCTGCTGCCCAGACAACTCCTAGGCTTTCCCCCGGTACGC
TCCGAGGAGTGGGAAGAGGTACACCCGATGCCCTTCAGGAAGGAGGAATGGCACTCTCAAGCGTCACCGTGTCGGTCTCA
AAATGACAAGGATT-CTCCCGCCCCCCAAAACCCCACCCCCCGGACAATTAGAGGCGCTCCACCAATCATGCCAATCACC
AACATACGCCACCACGGTCTTGCAGTGACCATTGTCGTCTAACCATGGCCAACCTAGCAATGACAGCCAGCCCGAGACGA
AGTAGCTGTAGACAAGGTCCGACAGGAACACAACCACCGCTAGTAGAAAAAGGACCTAATGTGAGACACATTAGTGCCGG
TTTGTTTTTGAGCCGGCACTAATGTGTACATTAGTGCCGGTTCCAACGGCTAGCCGGCCGCTGTCATTAGTACCGGTTCA
TGGCGAACCTTTAGCACCAGTTCGTGCCATGAACCGATACTAAAGAGAGTGGTGGCAGGATGTTGTCAGTCTAGGGCCCC
TCCAGCACCTTTAGTATCGGTTCGTGCCACGAACCGGTACTAAAGGT
>chr1A_4
---GAAAACAAACAGCACGGCAAAGTGCGCCTTTGCTTCTAGTACAATTCCAGTCCACAAGCATGGA-ATTGCCTTACAA
AATCAGGGAGGCTCATCCTGGTTGCACTGCAAGAAACAAACCAAATATATACGATTTTCCTAGGTCTTAGGCCATGTCCA
ACATGGGGCGCTTGGGAAGGTGTCAGGATTTTCTTCCCCGCGTGTGTCGCATATG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------CAGTTTAGTTACCATTAGCGTCTGGCGTTGGAAAGGTACAGCTCTTAGATAT
TTTCTAATTTTC---TAATATTAATTTTATTTTTCCTCTGTAAGTGCCAAGTCAGGCACCCGGCGTTGTAGATGGCCTTA
CAAATCTTAACAGAAAGCAAATTCATCTCCTTCCTCGGGTAAGAAGTCAGTTTGTATCTATGCGCTTGAGGACTGCTGCA
TGATCTGCACCGTCCTGATCAATTGGATTCTTCTGACCTTGTGATAAACAACTA-------GCTGGCATCACAATATAAG
ACATAAAAGCAGAACTGTGGCGTCATGATTCATGCGATACGCCAAAGTTCCATTAGTCTGCGCTGCTGCTGT------TG
TAGCCTCCTAATTGTAATCCATAAGCATCGTTGACTAACCCCAAGTACTTATGATTCATGTATCACACCAAATA---TAT
TCTGCACCGTAGCATTTATGACTTCCCAGGG-GGCTACCACTTCCCAACACGTTGAATCAAATATTATCTATCCTCTCCA
TCTTTCTGACAAGATGTTTCTGCATTTTAACTCTTGAAAGATTGCTGGTATTCTCAAGTCAAATCCATGTAATGTCAATA
ACAAAGACTTTCTACTCCTCAGGGTATATATAAACGAGCTGCTAGGTATGCTTAGTACTAGCCAAAGGATTCCTCAGAGC
CATACCACGCCAGATAATTCAGAGATCAGAAGAAATGGAGGCGGCAGAATGTTCATCAATTTGGGGTTCTCTCGATGCAA
TCTGTGACGAGTCGGAGATGATTGCGCATTTGCAGTCAGTGCTCTGGTGCGGCAGTGATTCTGATGCAAACCTCTGCTCC
TCCGAAAATGATAGCACAACAGCTTCTTTTGATCTCCTAGTGGATGACCTCGGTTCAGCGAATGAGAGGAACACTGGTAT
CAAGAGAAAGATGCAAGTGGATGAACAGAGCGATCATCACAATGAAGTCCCTGTGGCTCTCTCGGTAAGTGAAGTCCTGC
ATTTCGTCCATTTTGACATTA----TAATTCTTCTTCTTATTTATTTTTGTT-----GCAATTGATTCTATAGACTGCAA
GGAAGAGCGGTAACAAGTCAAGAGCTGCAATGGACTCACAAAGTAACTATGCAAAGGTTTGATAGTTACTTACATATTAT
TAGTTTTGTTTCGCTTTAGGGGAATCTCTTACTCCCTCCATCCCAAAATAAGTGTCTCAATCTTAGTATAACTTTGTACT
AAAGTTAGTACAAAGTTGAGACACTTATTTTGGGACGCAGGGAGTATTAAACATTTTATCACAATGCGCAATTTTGGAAC
AGAGAAGAAGGCATAAGATCAATGAGAGGCTGAGAGTACTGCAGCACCTGATCCCTAACGGCACAAAGGTGAGTTCTTAC
TATTTGCCATTCATTGGTCATTTGCACTTGCCAATGCCAATTGTGTTGATCGTTTTCTTTTTCAGGTTGACATAAGCACA
ATGTTGGAGGAAGCAGTCCAGTATGTCAAGTTTCTGCATCTGCAGATCAAGGTATGTATTCACTTACGAAGCAACAGCCA
ACAGGTGAACAAATGTTTCAGTTGTCAGTGTGCAAGTGCGCGCC-CTTACTTCTTCTCATCTTTTTCATGCACAGCTCTT
GAGCTCCGATGAAATGTGGAGGTACGCTCCTCTCGCCTACGATGGCGTCAACATCAGGCT-CCCCCATCTGGATTCTCTG
GCTCATGAATGACTACCCCAAACAAACTGCTGGCTCAGCGGATGGTACATAATTTGTTGGAAGGACCTGCGGCTCAAGTT
TTCTGAATCATTTGTCGTAGCATTGTCATCTGTCTCGTGGACTTTAACCTGAATTTCCATTCTATTCAGTATTGTAGCTC
CTTATCCAGGATTATATTTTTTTCTATTCTTGATTGCTTGAACAGTGTCAATAATAAATTCTATTTTAAACCGGGTTTGT
TGTATATTGATTTTAATTTTGAATTGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr1D_530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GGGTAAGAAGTCAGTTCGTATCTATGCGCTTGAGGACTGCTGCA
TGATCTGCACCGTCCTGATCAATTGGATTCTTCTGACCTTGTTATAAACAACTA-------GCTGGGATCACAATATAAG
ACATAAAAGCTGGACTGTGGCGTCATGATTCATGCGATACACCGAAGTTCCATTAGTCTGCGCTGCTGCTGCT---GCTG
TTGCCTCCTAATTGTGATCCATAAGCATCGTTGACTAACCC-AAGTACTTATGATTCATGTACCACAGCAAATA---TAT
TCTGCACCATAGCATTTATGACTTCCCAGGGGGGCTAGCACTTCCCAACACGTTGAATCAAATATTATCTA---------
-----CTCACAATATGTTTCTGCATTTTCATTTTTGAAACATTGTTGTTAACC-CAAGTCAAATCCATGTAATGTCAATA
ACAAAGACTTTCTGCTCCTCAGGGTATATATAAACGCACTGCTAGGTATGCTCAGTACTGACCAAAGGATTCCTCAGAGC
CATACCACACCAGTTAATTCAGAGATCAGAAAAAATGGAGGCGGCAGAATGTTCATCAATTTGGGGTTCTCTCGAAGCAA
TCTGTGAGGAGTCGGAGATGATTGCGCATTTGCAGTCAGTGCTCTGGTGCGGCAGTGATTCTGATGCAAACCTCTGCTCC
TCCGAAAATGATAGCACAAAAGCTTCTTTTGATCTCCTAGTGGATGACCTCGGTTCAGCGAATGAGAGGAACACTGGTAT
CAAGAGAAAGATGCAAGTGGATGAACAGAGCGACCATCACAATGAAGTCCCGGTGGCTCTCTCGGTAAGTGAAGTCCTGC
ATTTCTTCCATTTTGACATTA----TAATTCTTCTTCTTATTTATTTTTATC-----GCAATCGATTCTATAGACCGTAA
GGAAGAGTGGTAACATGTCAAGAGCTGGATTGGACTCACAAAGCAACTATGCAAAGGTTTGATAGTTACTTACATATTAT
TAGCTCAGTTTCCCTTTAGGGAAATCTCT---------------------------------------------------
--------------------------------------------TATTAAACATTTTATCACAATGTTCAATTTTGGAAC
AGAGAAGAAGGCATAAGATCAATGAGAGACTGAGAGTACTGCAGCACCTGATTCCTAACGGCACAAAGGTGAGTTCTTAC
TATTTGCCATTCATTGTTCATTTGCACCTGCCAATGCCATTTGTGTTGATCGTTTGCTTTTTCAGGTTGACATAAGCACA
ATGTTGGAGGAAGCAGTCCACTATGTCAAGTTTCTGCATCTGCAAATCAAGGTATGTATTCACTTATGAAGCAATAGCCA
ACAGATGAACAAATGTTTCAGTTGTCAGCGTGCAAGTGCGCGCCACTTAATTCTTCCCATCTTTTTCATGCGCAGCTCTT
GAGCTCCGATGAAATGTGGATGTACGCTCCCCTCGCCTACGATGGCATCAATGTCAGGCT-CCCCCATCTGGATTGTCTA
GCTCATGAATGACTACCCCAAACAAA---CTGGCTCAGCGGATGGTACATAATTTGTTGGAAGGACCCGTGGCTCAACTT
TTCTGAATCATCTGTCGTAGTATTGTCATCTGTCTCGTGGACTTTAACCTCAATTTCCATTTTATTCAGTATTGTAGCTC
CTTATTCAGGATTATATTTTTT-CTATTCTTGATTGCTTGAGCAGTGTCGATAATAAGTTCTATTTTAAACCAGGTTTGT
CGTACATTGATTTTAATTTTGAATTGA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr1A_740
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCTTATTGTCATACATAAGCATCGTTGACTAATCC--AGTAATTATGATTCATGCACCACACCAAACATAGTAT
TCTACACCATAGCATTTATGACTTCCCAC--GGGCTACCACTTCCCAACACGTTGAGTCAAATATTATCTATGCTCTTCG
AGTCTTTCTC-------TTCTGCATTATTGTTCTTGAAAGATTGTTGTTAATC-TAAGTCAAATCCATGTAATGTCAATA
ACAAAGACTTTCTGCTCCTCAAGGTATATATAAGCACGCTCCTAGGTATGCTCAGTACTAACCAAAGGATTTCTCATAAC
CATACCGCACAAGAGAATTCAGAGATCAGAAGAAATGGAGGAGGCAGAATGTGCATCTGGTTGGGGTTCTCTCGATGCAA
TCTGTGAGGAGTCGGAGATGATTGCACATTTGCAGTCAGTGCTCTGGTGTGACAGTGATTCTGATGCAAATCTCCGCTCC
TCCAAAAATGATAGCACAAATGCATCTTTTGATCTCCAAGTCGATGACCTCAGTTCGGCAAATGAGAGGGACATTGGTAT
CAAGAGAAAGATGCAAGTGGATGAGCAGAGCGACCATCACAATGAAGTCCCCGCGGTTCTCTCGGTAAGTGAAGGCCTAC
AATTGGTCAATTTTATCATTAAAATTAATTCTACTCCTTATTTATTTATTTTTGATAGCAATCGATTCTCTAGGCCCCAA
GGAAGAGTGGTAACAAATCAAGAGCTGCAATGGACTCACAAAGCAACTATGCAAAGGTTTGATAGTTACTTACATATTAT
TAGCTTTGTTTCCCTTTTGCGGAATCTCT---------------------------------------------------
--------------------------------------------TATTAAACATTTTATCACCATGTGCAATTTTGGAAC
AGAGAAGAAGGCATAAGATCAACGAGAGGCTAAGAGTACTGCAGCACCTGATCCCTAACGGCACAAAGGTGAATTCTTAC
TATTTTCCATTCATTCTTCATTTGCACCTGCCAATGCTAATTGTGTTGAGCGTTTGCTTTTTCAGGTTGACATAAGCACA
ATGTTGGAGGAAGCAGTCCAGTATGTCAAGTTTCTGCATATGCAGATCAAGGTATGTATTCACTTATAAAGCAACAG---
----ATGCACAAATATTTCGATTGTCAGTGTGCGAGTGTGTGCCACTTAGTTCTTCCCATCTTTTTGATGCATAGCTCTT
GAGCTCTGATGAAATGTGGATGTACGCTCCGCTCGCCTACGACGGCATCAATGTCAGTTCCCCCCCATTTGGATTCTCTG
GTTCAGGAATGACTACCCCAAACAAA---CTGACTCAGCAGATGGTACATAATTTGTTGGAAGGACCTATGGCTCAACTG
TTCTGATTCATCTGTCATAGCATTGTCATATCTATTGTGGACTTCAACCCGAATTTCCA-TTTATTGAGTATTGTAGCTC
CTTATTCAGGATTCTATTTTT----ATTCTTGATTGCTTAAACAATGTCAATAATAAGATTTATTTTAAACCAGGCTTGT
TGTATATTGATTTTGATTTAGAAT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr1B_2413
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTAGTATCTT--TTGAAATAGGCTTTTGCCCCGCTA------TATTAATATAATAACCACACGATACAACATGAG
AACCATTGCTGGGGCAAACAACGCAACTACGCCCAAACGAAAAGAAAGAGAAAACAATGCCAACACCGGTGGATCAACGA
AAACGAAAATGACTCGCAACCGCTGCGTCCGCTCCGAAGTATTCCCACCACAATCCTAGCACTCTGATTTGCAGCGTACC
AACCAGCACCTCCAAGATGGACAGT---GACGATGACGACACTACTACCCGGACAGGTCCTAGGGTTTCCCCCGGTACGC
TTCGAGGGGTGGGAAGAGGTACACCCAACGCCCTTCAGGAAGGAGGGATGACACTCGCAAGCGTCACCATGTCGGTGTCA
AAATGACAAGGATTTCTCTCAACCCCCAAAACCCCACCTCCCGGACAATCAGAGGCTCTCCACCAAACATGCCATCCACC
AACATACGCCACCACGGTCTTGCAGTCACCATCGTCGTCTCACCATGGCCAACGTAGCAAGGCCTATCAGCCCGAGACGA
AGCAGCCGTAGACAAGGTCCTACAGGATCACAACCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr6D_2421
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TTTCTCTAAATAGGCTTTCCCCCCACTATATTAATATAAATATAGCAGTCACACGATACAACATGAG
AACTATTGCTGGGGCAAACAGCACATCCACGCCCAAAAGAAAAGAAAGAGGAAACAATGCTGACACCGGCGAATCAACGA
AAACGAAAATGATTAGCAGCTGTTGCGTCCTCTCC---GTATTATCACCACGATCCTAGCACTCTGATTCGCTGCGTACC
AAGCAGTACCTTCAAGAAGGACAAT---GACGATGATGACACTGCTGCCCGGACATGTCCTAGAGTTTCCCCCGGTATGC
TCCGAGGAGTGGGAAGAGGTACACCCGACGCCCTTCAGGAAGGAGGGATGACACTCTCAAGCGTCACCGTCTCGGTGTCA
AAATGACAAGGATTTCTCCCGAGCCCCAAAACCCCACCTCCCGGACAATCAGAGGCGCTCCCCCAATCATGCCATCCACT
AACATACGCCACCACGCTCTTGCAATCACCATCATCGCCTCACCATGGCCAACGT-GCAAGGCCGGCCAGCCCAAGACGA
AGCAGTCATAGACAAGGTTCGACAGGATCACAACCAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr7D_2428
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AAATAGGCTTTCGCCCCGCTA------TATTAATATAGCAACCACACGATACAACATGAG
AACCATTGCTGGG-CAAACAACACAACCACATCCAAAAGAAAAGAAAGAGAAAACAATGCCGACACCGGCGGATCAACGA
AAACAAAAATGTCTCGCAGCCGCTGCGTCCTCTCCGAAGTATTCCCACCACGATCCTAGCACGCTTATTCGCCGCGTACC
AAGCAGCACCTCCAAGAAGGACAGT---GACGAC---GACACTCCTGCCCGGACAGGTCCTAGGGTT-------------
TCCGAGGAGTGGGAAGAGGTACACCCGACGCCCTTCAGGAAGGAGGGATGACACTCTCAAGCGTCACCGTGTCGGTGTCA
AAATGACAAGGATTTCTCCCGACCCCCAAAACCCCACCTCCTGAACAATCAGAGCCGCTCCACCAATCATGCCATCCACC
AACATACACCACCACGGTCTTGCAGTCACCATCGTCGTCTCACCATGGCCAACGTAGCAAGGCCAGCCAGCCCGAGACGA
AGCAGTCGTCGACAAGGTCCGACAGGATCACCACCAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chrUn_2449
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TATAAATATAGCAGTCACATCATACAACATGAG
AACCATTGTTGGGGCAAACAGCACATCCACGCCCAAAAGAAAAGAAAGAGGAAACAATGCTGACACCGGTGAATCAACGA
AAACGAAAATGATTAGCAGCTGCTGCGTCCTCTCC---GTATTATCACCATGATCCTAGCACTCTGATTCGCTGCGTACC
AAGCAGCACCTTCAAGAAGGACAATGACGACGAC---GACACTGCTGCCCGGACATGTCCTAGGGTTTCCCCCGGTACGC
TCCGAGGAGTGGGAAGAGGTACACCCGACGCCCTTCAGGAAGGAGGGATGACACTCTCAAGCGTCACCGCCTCGTTGTCA
AAATGACAAGGATTTCTCCCGACCCCCAAAACCCCACCTCCCGGACAATCAGAGGCGCTCCCCCAATCAAGCCATCCACT
AACATACGCCACCACACTCTTGCAATCACCATCGTCGTCTCACCATGGCCAACGT-GCAAGGCCGGCTAGCCCGAGACGA
AGCAGCCGTAGACAAGGTCCGACAAGATCACAACCAC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>chr5A_2452
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TAATATAGCAGTCACATGATACAACATGAG
AACCATTGCTGGGGAAAACAACACATCCATGCCCAAAAGAAAAGAAAGAGAAAACAATGTCGACACCAACGGATCAACAA
AAACGAAAATGACTCGTAGTCGCTGCGTCCTCTCCTAAGTATTCCCACCACGATCCTAGCACTCTGATTCGCCATGTACC
AAGCAGCACCTCCAAGAAGGACAGTGACGACGAC---GACACTGCTGCCCGGATAGGTCCTAGGGTTTCCCCCGGTACCC
TCCGAGGAGTGGGAAGAGGTACACC-GACGTCCTTCAGGAAGGAGTGATGATAGTCTCAAGTGTCATCGTGTCTGTGTCA
AAATGACAAGGATTTCTCCCGACCCCCAAAACCC-ACCTCCCGGATAATCAGAGGTGCTCCACCAGTCATGGTATCCACC
CACATACGCCACCACGGTCTTGTAGTCACCATCGTTGTTTCACCATGACCAACGTAGCAAGGTTGGCCAGCCCGAGACGT
AGCAGTCATAGACAAGATCCGACTGGATCACGACCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
SSS--------------S----------------------------------S-------S--S---S----S----S--
-------------S-----S-S------------S-SSSS-SSS------------------------------------
-----------------------------------------S------S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S---SS-----S-S-SS--S--------------------------
----------SSSSS-------------S------S---S--------S-----------S-------------------
S--SS--S--------S-----S-----------S-------S----------S-------------S------------
------------------S-----------S-----------------S-----SSSSSSS---------S---------
--------------------------------S----------------------------------------SSS----
------------------------S-----S-------------S--------------------------S--------
--------------------S--------S------------------------------------S-------------
------------------S-------------------------------------------------S-S---------
------------S-------S---------------------------S-------------------------------
--------------------------------------------S-------------S-------------S---S---
----S--------------------S------------------------------------------------------
---------------------------SS---------------------------------------------S-----
---------------------------------S------------------S---------------------------
---------------------------------------SSS-S----------------------------------S-
-----------S--------------S---------------------------------------S--S-----SS---
------S-------------------------------------------------------------------------
-----------------------------------------------S----------------------------S---
-------------------------------------S-----S--S-----------S---------------------
-------------------------------------------------------------------------S------
---------------------------------------------------------------------SSSS-------
---------------------------S--S------------S--------------------------S---------
---------------------------------------S-S---------------S------S---------------
------------------------------S------------------S------------------------------
-----------S----------------------SS----------S-SSSS-------------------S--------
--------------S--SSS---S---------------S--------S----------------------S--------
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---S-------------------------------S---------------------------------------
--------------------------S-S------S--------------------------------------------
---------------------S-----------------------------------------S------S---------
----------------------------------S----SS---------S----SS-------S---------------
----------------------------S-----------------S---S-------------------------S---
---------------------S----------------S----------S------------------------SS----
--------------------------S-----S-------S------------S------S-S-----------------
--S---S--------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CTTGAACCCTGGTAGGCTGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>reverse_2519
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AACGCATCCACCCAAAGGAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
