>input_sequence_56624
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------------------------------------CTTTAAGATCGCCCCTGCAAGCTCACACACTGCTCTCAGCACAG
GCTGACACGAGGAGCTCAAGTCGAAGTTGTAGCTAGCGAGAAGCCAAGAAGCCAGTCATGGGATGGGGAAGCAGGAAACA
GCAGCACGGGACGCCGCAACGCGCATTGGGGCTAGGAG------GAGAGATCGGCGAACGCAAGGGCGGTGGCAAGAGCA
AGGCCTTCTCCTTCTCCTTCTTGCCGCTTTCGTGGCTCTCCAAGCTCGCCACGAAGCCCAAGCGCGCGCCCGCGTCCACG
CACGAGGGCCGCGGAGGCGCTGG------CGCTGACGCCCCCCCGCCGTTCAAGTCGGGCCTTCCGGAGCGCGCCGCCAG
CCCGGCAAAGGTGGCGATCGCGCCGGCGGGCCGGCTCAGCTCGCCCTCGCCGCGTCGCTCTCCCGCTGTTCTGCGGCGGC
TCTTTGCTGGCAACGACAACGCCGACGCCGTGGCCGCGCGCGGGCGCCATCGCCCTGCCGCAGCCGTCGCTGCCGCCGAA
GAAGTCGTACCAAGGCGGCTCTCTGTTGGCAACGACAGCGCCGACGCCGTCGCCCCGCGCCGTCACTGCAGACCCCGGCG
CCACTGCTCCCTCGGCGGTGACCGTGACCTCCAGGCGCCGCTCGGCAAACACATCCCCTTCTCCCTCGCCGGCTCCCCAG
CGCAGCCACCGCCTTCAGCACAGACGGCAGCGGCCGCGGCACCGTCGGACACGGACGGCGGGGGCGCTCGGCTGAGGCGT
CGGCACCGTGGCCGCCGGCACCGGCGCAGCGTCAGCGGCGGCCGTAGGTCGTCGTTCTCCGGAAAGGTGACGCTGAGGGT
GAAGGTGCGGTCGCCGCGGCGGTCGGCGCCGGAGCTGGAGAGCCTCGCCGTGGTGCGACGGACGCGGGACCCGCAGAGGG
CGTTCAGGGAGTCGATGTACGAGATGATCGCGAGCAGCGGAGGGACCGACGCCCGGCCGGAAGAGCTGGAGCGGCTGCTG
GCGTGCTACCTCGCCCTCAACGCCGACGAACACCACGACTGCATCGTCAAGGTCTTCCGCCAGGTCTGGTTCGACCATGT
CAACCTGCCGCCGCCTCGACGGGGCAGGGACCGGGAGGAACACCCCGGACGGCACGCGAGGCCGTAAATTCTCTAACGCA
AGCAGTTGCGGTATGCATGTACATTACGTACGTTATTATGCCGGATTTACCTTGGAATTTTCGTAAATCTCTGTCACTCC
AAAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------TCTA-----------------------------------------------------------
--------------------------------------------------------------------------------
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----
>chr1B_1_TraesCS1B01G350500
CGCGAAGGGGCCCGTCGGGGGGTGCGCCTCCAGCACCCGCCGCCTTCGACGGCCGGGCGCGGCTGCCCGGCGGCGATGGC
AGTGGTCGGGGCGGTGGATCTGGGCCTCTTTTGTTTAGGGTTTGGGGGGCCTCCGGAGCCGCACGCGCGTGCGACCCGGG
AGGCGTTTCGGGAGGAGACTAGAGAATACAATTACATTTACTTAACAAAAAGATAAACAGGGGAAAAGTACAGCGTCGTG
TTTTTCCTGTGGAAAGTTTACAGGGCAGAGCATGCTCGGTCTCAGGCCGAGACCAACAAACAGTAGGCATTCCTGCACGG
CAGTCGGCAGGGCACAAACATCATACTCCAT------------------------------ACAGACCTGTACAACTGAG
CAGGCATGCACCTCAGTTCGAGTCTGAACTTCTTTCACATGGCACAGGCATGTGTTTTCTACTGTTCCCACACCGAGCGG
TAGAAAAAAAAATTGTGCTGCCTGTTTGCTCCGGGCAGGAGAGGAAGAACGGCAATGGGCAAAAACGGCGGGGCTTTCGT
TCAAACGAACGA----TGGGG-----------AAGCAAGCAGGACGACGAGGCAGAGAAAGCAAAAGCAGCACGTAA---
--CAAGCCAACCTTGCTTTGTTTTCAGTTTCAGCCATCAGTCCACGCTTTCTCCTCTGCTTTGTCTCCTCCCTTTGCTCC
CACTGCTCTTCCGCGA-----ATTGACGAATCATGAGTGTGCGTGAGCGTATCGCGCATGGGGCCTATGAATTCTGAACT
CCTCATGCCTGCCCTGCCTGCCGCCAGGGGCTTTCGAAAACCCATGCTGCATGCACGCAGACGACAGACATAATTAGCGC
CGGGCAGAGTTCAGATGATCATGCCTGTCTCCTGCCCGTGCCGGCGCTGTCTCGCTTTCCATTCTCCCACATTGCCTTCT
CTCTAGGATAGGAACTACTACTGCACAGTAGTGCAGTGCAAGTAGT---------------------TCATAAAGCTTGA
GCTCTAGTCCCAGTAGCGGCAACAAGCACTTGCACCCTTTAAGATCGCCCCTGCAAGCTCACACACTGCTCTCAGCACAG
GCTGACACGAGGAGCTCAAGTCGAAGTTGTAGCTAGCGAGAAGCCAAGAAGCCAGTCATGGGATGGGGAAGCAGGAAACA
GCAGCACGGGACGCCGCAACGCGCATTGGGGCTAGGAG------GAGAGATCGGCGAACGCAAGGGCGGTGGCAAGAGCA
AGGCCTTCTCCTTCTCCTTCTTGCCGCTTTCGTGGCTCTCCAAGCTCGCCACGAAGCCCAAGCGCGCGCCCGCGTCCACG
CACGAGGGCCGCGGAGGCGCTGG------CGCTGACGCCCCCCCGCCGTTCAAGTCGGGCCTTCCGGAGCGCGCCGCCAG
CCCGGCAAAGGTGGCGATCGCGCCGGCGGGCCGGCTCAGCTCGCCCTCGCCGCGTCGCTCTCCCGCTGTTCTGCGGCGGC
TCTTTGCTGGCAACGACAACGCCGACGCCGTGGCCGCGCGCGGGCGCCATCGCCCTGCCGCAGCCGTCGCTGCCGCCGAA
GAAGTCGTACCAAGGCGGCTCTCTGTTGGCAACGACAGCGCCGACGCCGTCGCCCCGCGCCGTCACTGCAGACCCCGGCG
CCACTGCTCCCTCGGCGGTGACCGTGACCTCCAGGCGCCGCTCGGCAAACACATCCCCTTCTCCCTCGCCGGCTCCCCAG
CGCAGCCACCGCCTTCAGCACAGACGGCAGCGGCCGCGGCACCGTCGGACACGGACGGCGGGGGCGCTCGGCTGAGGCGT
CGGCACCGTGGCCGCCGGCACCGGCGCAGCGTCAGCGGCGGCCGTAGGTCGTCGTTCTCCGGAAAGGTGACGCTGAGGGT
GAAGGTGCGGTCGCCGCGGCGGTCGGCGCCGGAGCTGGAGAGCCTCGCCGTGGTGCGACGGACGCGGGACCCGCAGAGGG
CGTTCAGGGAGTCGATGTACGAGATGATCGCGAGCAGCGGAGGGACCGACGCCCGGCCGGAAGAGCTGGAGCGGCTGCTG
GCGTGCTACCTCGCCCTCAACGCCGACGAACACCACGACTGCATCGTCAAGGTCTTCCGCCAGGTCTGGTTCGACCATGT
CAACCTGCCGCCGCCTCGACGGGGCAGGGACCGGGAGGAACACCCCGGACGGCACGCGAGGCCGTAAATTCTCTAACGCA
AGCAGTTGCGGTATGCATGTACATTACGTACGTTATTATGCCGGATTTACCTTGGAATTTTCGTAAATCTCTGTCACTCC
AAAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------TCTAAAAAAAAAGGCTCGCCAGC----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------CTGAAACGCAGAGACAA
TTTACCGAGCTACGATGAAAATAGGGAAACGTTTAAAAACAACCGGACAGAAATCATCCGCTTCACCTGGACGCCACGCG
TCCTGGTAGACCTGCACGCATGACGTTCTTTCCTGCCGGGCCACTCGTTTCTTAGAGCATCTCCAACAGACACGAGGTAG
TCCCGTAATAACTAACTCGCCTGAAAAAGTAGGATCGCATCGGGCGATCAAGGAGGCGACCGGGATCCCTTGCGCGCCGC
CGGTGACGCCGCCGGTTCCCTCTCTCTCCGTCGGCCGCTCCGGCGACGGGAGGGAGGGGGAACCCCGGGTCTGTTCGCTA
GGTGGGTGTGTGGTAGGGTTAGGGTTGAGGGAGACGCTCCCGAGGCCGTTGCGGTGGTGTCGCGTTGGAATAAGTTTCTC
CGGGTTCCGTTCGCGGTCAGGCGAGGCTTTTGCCTTCGTCTAGGAGCCAGCGGTGTTGGGGATCCCCGGATCTCGTCGAG
GTCGCGGGCTATGGTGGTTGGAGGTCCATCGGCACTGGCTGTTTGGATCCTCAGATGGGCGATGTGTTGGGGAACGTTGC
AGAAAATAAAATTTTTCCTACGATTTCACCAAGATCCATCTATGAGTTTATCTAAGCAACGAGTGAAAGGAGAGATGCAT
CTACATACCACTTTGTAGATCGCGAGCGGAAGCGTTCAAAAGAACGGGGTTGAAGTAGTCGTTCTCGTCGTGATCCTATC
ACCGGAGATCCTAGCGCCGAACGGACGGCACCTCCGCGTTCAACACATGTACGGCCAGCGTGACATCTCCTCCGTCTTGA
TCCAGCAAGGGGAAGGAGAGGTTGATGATGATCCAGCAGCACGACGGCGTGGTGGTGGACGCAACAGAACTCCGGCATGG
CTTCGCCAAGCTGCTGCGGGAGGAGGACGAGGTGTAGCAGGGGGAGGGAGGCGCCAAGACTTGGGTGCGGCTGCCCTCCC
CCTG
>chr1D_197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTTTCTTAACAAAAAGGTAAATAAGGGAAAAGTACAGTGTCGTG
TTCTTCCTGTGGAAAGTGTCCATGGCAGAGCATGCTCGGTCTCAGGCCGAGACCAACAAACAGTAAGCATTCCTGCA---
----CGGCAGGGCACAAGCATAATACAGCAACACTGATGTGAATT--------------------ACCTGTACAACTGAG
CAGGCA----CCTCAGTTCGAGTCTGAACTTCTTTTACATGACACAGGCATGTGTT-TCTACTGTTCCTACAC-GAGTAG
TAGCAAAA---------------GTTTGTTCCTGGTAGGAGTGGAAGAATGGCAATGGGCAAAAACGGCGGGCCTTTTGT
TCAAACGAACGAACGATGGGAGAAGAGAAGC-AAGCAGGCAGGACGACGAGGCAGAGAAAGCAAAAGCAGCACGTAGCAA
GCCAAGCCAACGTTGCTTTGTTTTCAGTTTCAGCCATCAGTCCACGCTTTCTCCTCTGCTTTGTCTCCCCCCTTTGCTCC
CTCTGCTCTTCCGCGAATAGTATTGACGAATCATGAGTGTTCGTGAGCGTATCGCGCATGGGGCCTATGAATTCTGAACT
CCTCATGCCCGCC-TGCCTGCCGCCAGGGGCTTTCGAAAACCCATGCTGCATGCACGCA---GATGGACATAATTAGCGC
CCGGCAGAGTTCAGATGATCATGCCTGTCTCCTGCCCGTGCCGGCGCTGTCTCGCTTTCCATTCCCCGACATTGCCTTCT
CTCTAGGATAGGAGCTACTACTGCACAGTAGAGCAGCTCAAGTAGT---------------------GCATAAAGCTTGT
GCTCAAGTCCCAGTAGCGGCAACAAGAACTTGCACGCTTTAAGGTCGCCCCTCCAAGCTCAC------------------
----ACACGAGAAGCTCGAGTCGGAGTTGTAGATAGCAAGAAGCCAAGAAGCCAGTCATGGGATGGGGAAGCAGGAAACA
GCAGCACGGGACGCCGTCACGCGCGTCGGAGCAAGGAGAGTCCGGCGAG---------CACAAGGGCAGTGGCAAGAGCA
AGGCCTTCCCCTTCTCTTTCTCCCCGCTCTCGTGGCTCTCCAAGCTCGCCGCGAAGCCCAAGCGCACGCCTGCGTCCACG
CACGAGGGCCGCGGAGCCGGTGCGAGTGCCGCTGCCGCCGCCCCGCCGTTCAAGTCGGCCCTTCCCGAGCGCG---TCAG
CCCGGCTAAGGTGGTGATTGCGCCGGCGGGCCGGCTCAGCTCGCCCTCGCCGCGTCGCTCTCCCGCTGTTCTGCGGCGGC
TCTTTGTTGGCAACGACAACGCGGAGGCCGTGGCCGCGCGCGGGCGCCATCGCCCTGCCGCAGCCGTCGCCGCCGCCGAA
GAAGTCGTACCAAGGCGGCTCTCTGTTGGCAACGACAGCGCCGACGCCGTCGCCCCGCGCCGGCACTGCAGACCTCGGCG
CCACTGCTCCGTCGGCGGCGACCGTGACCTCCAGGCGCCGCTCGGCAAACACATCCCCTTCTCCCTCGCTGGCTCCCCAG
CGCAGCCACGGCCTCCTCCACAGGCGGCAGCAGCCGCGGCACCGTCGGACACGGACGGCGGGGGCGCTCGGCTGAGGCGT
CGGCACCGTGGCCGCCGGCACTGGCGCAGCGTCAGCGGCGGCCGGAGATCGTCGTTCTCCGGAAAGGTGACGCTGCGGGT
GAAGGTGCGGTCGCCGCGGCGGTCGGCGCCGGAGCTGGAGAGCCTCGCCGTGGTGCGGCGGACGCGGGACCCGCAGCGGG
CGTTCAGGGAGTCGATGTCCGAGATGATCGCGAGCAGCGGGGGGACCGACGCCCGGCCGGAGGAGCTGGAGCGGCTGCTG
GCGTGCTACCTCGCCCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTCTTCCGCCAGGTCTGGTTCGACCACGT
CAACCTGCCGCCGCCTCGACGGGGCAGGGGCCGGGAGGAACACCCCGGACGGCACGCGAGGCCGTAAATTCTCGAACGCA
AGCAGTTGCTGTATGCATGTACATTACGTACGTTTTTATGCCGGATTTACCTTAGAATTTTCGTAAATCTCTGTCACTCA
AAAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------TCTAAAAAAAGGGTTT-GCCAGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTGAAACGCAGAGACAA
TTTACCGAGCCACGATGAAAATA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>chr1A_197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTTTCTTAACAAAAAGGTAAATAAG-----AGTACAGTGTTGTG
TTTTTCCTGTGGAAAGTGTACATGACAGAGCATGCTCGGTCTCAGGCCGAGACCAACATGCCTTTATTTGATGTGA----
-------------------ATAATACAGCACTACTGATGTGAATTACCAGCCGTACAGCACACAGACCTGTACAACTGAG
CAGGCA----CTTCACTTCGAGTCTGAACTTCTTTCACATGGCACAGGCATGTGTT-TCTACCGTTCCTACACCGAGTAG
TAGCAAAA---------------ATTTGTTCCTGGCAGGAGTGGAAGAATGGCAATGGGCAAAAACGGCGGGGCTTTTGT
TCAAACGAACGA----TGAGAGAACAGAAGCAAAGCAGGCAGGACGACGAGGCAGAGAAAGCAAAAGCAGCAGCGTAG--
--CAAGCCAAGCTTGCTTTGTTTTCAGTTTCAGCCATCAGTCCACGCTTTGTCCTCTGCTTTGTCTCCTCCCTTTGCTCC
CTCTGCTCTCCCGCGA-----ATTGACGAATCATGAGTGTGCGTGAGCGTATCGCGCATGGGGCCTATGAATTCTGAACT
CCTCATGCCCGCC-TGCCTGCCGCCAGGGGCTTTCGAAAACCCATGCTGCATGCACGCA---GACAGACATAATTAGCGC
CGGGCAGAGTTCAGATGATCATGCCTGTCCCCTGCCCGTGCCGGCGCTGTCTCGCTTTCCATTCTCCGACATTGCCTTCT
CTCTAGGATAGGAGCCACTGTAGCTAGCTAGTGCAGTAGTGCAAGTGTGTGTACGGTGTACCCCAAAGCTTAAAGCTTGA
GCTCAAGTCCCAGTAGCGGCAACAAGCACTTGCACGCTTTAAGCTCACACACT-----------------CTCAGCACAG
GCTGACACGAGGAGCTCAAGTCGAAGTTGTAGCTAGCG--------AGAAGCCAGTCATGGGATGGGGAAGCAGGAAACA
GCAACACGGGACGCCGTCACGCGCATCGGAGCAAGGAG------GCGAG---------CGCAAGGGCGGTGGCAAGAGCA
AGGCCTTCTCCTTCTCCTTCTCGCCGCTCTCGTGGCTCGCTAAGATAGCCGCCAAGCCCAAGCGCACGCCCGCGTCCACG
CACGAGGGCCGCGGACCCGGTGCGAGTGCCGCTGCCGCCGCCCCGCCGTTCAAGTCGGCCCTTCCCGAGCGCG---CCAG
CCCGGCTAAGGTGGCGATCGCGCCGGCGGGCCGGCTCAGCTCGCCCTCGCCGCGTCGCTCGCCTGCTGTTCTGCGGCGGC
TGTTTGTTGGCAACGACAACGCGGAGGCCGTGGCCGCGCGCGGGCGCCATCGCCCTGCCGCCGCCGTCGTCGCCACCGAA
GAAGTCGTACCAAGGCGGCTCTCTGTTGGCAACGACAGCGCCGACGCCGTCGCCCCGCGCCGGCACTGCAGACCCCGGCG
CCACTGCTCCGTCGGCGGTGACCGTGACCTCCAGGCGCCGCTCGGCAAACACATCCCCTTCTCCCTCGCCGGCTCCCCAG
CGCAGCCACGGCCTCCTCCACAGGCGGCAGCAGCTGCGGCACCGTCGGACACGGACGGCGGCGGCGCTCGGCTAAGGCGT
CGGCACCGTGGCCGCCGGCACCGCCGCAGCGTCAGCGGCGGCCGGAGATCGTCGTTCTCCGGAAAGGTGACGCTGCGGGT
GAAGGTGCGGTCGCCGCGGCGGTCAGCGCCGGAGCTGGAGAGCCTCGCCGTGGTGCGGCGGACGCGGGACCCGCAGAGGG
CGTTCCGGGAGTCGATGTCCGAGATGATCGCGAGCAGCGGAGGGACCGACGCCCGGCCGGAGGAGCTGGAGCGGCTGCTG
GCGTGCTACCTCGCCCTCAACGCCGACGAGCACCACGACTGCATCGTCAAGGTCTTCTGCCAGGTCTGGTTCGATCACGT
CAACCTGCCGCCGCCTCGACGGGGCAGGGACCGGGAGGAACACCCCGGACGGCACGCGAGGCCGTAAATTCTCGGATGCA
AGCAGTTGATGTATGTATGTACATTACGTACGTTTTTATGCCGGATTTACCTTAGAA-TTTCGTAAATCTCTGTCACTCC
AAATTTTTCTATATCTAAATAGCTAACCCCACTAACATATTTCTCCCAACATGCAAATATGACACCTCATCAAGCAACAT
GCATTAGAAAATGCCCCTTAGGGCATGTACAATGGTCGATAAGGTAGTCTTATCTTAAACCTTGCATGTAATTTAGAGAT
GACAAGAAAACATGTCTACAATGGGTCATCTCTTAGCCTTATCTTCAATAGCTAGTTATTCCTAAAAACGTGGTGAGACA
TATTGTGCTAAGAGATCATCTCTTGCATTCTCTTAATTAAGAGAAGACAAGCCTTCTCTTATGATTTCTCTCTCCTCCAT
CTCATCATTTATCCTACGTGGCATCGCTAAGATAGAACCATTGTACATGCCCTTAATAAACATTCAATGAGTAATAGGAA
AAGGTTCACCTCAACATGCAAACATGCGTGCTGTCAACCTTAAGTTGTTGTTGTACCTCTTCGAGCTTATGTCTGGTCTT
AAAATCATTTTTTTAAAAAGTGAAGTCTTGTGTGTGGGAGGTGATGAGTCTACACTCCGTAAATATGCGGACCTCTTTGG
ATGCAAAATTGGCCACTTTCATATGAAATACTTAGGGGTGCCTGTGAGCTATTCTTCTTTAGGGAACATTGACTGGGAGT
TTGTTGCTATTAGATACCTCATGAGTTGCGATGCTTGGATTGGCAGCTCAGCCTCCTCTGGCGGAAGACTGACTTTGCTC
AATTCTTCCCTGTCCAGTATAGCTTACTACTATATGTCTATGTTCCTTCTCTCTAAAACATTCATTAAGAGACTGGACAA
GTATCGTCGTAAATTTTTTTGGTGTGGTGGCACGGAGAAAAGACGTTACCACCTTGTTAAGTGGTCTCGGGTGTGTCGAT
CTAAGAGAAGAGGGGGGCTGGGAGTTAAAGACCTCCATAAACAGAACATATCTCTTCTAGCGAAGTGGTGGTGGAAAATT
GATACGGGCGAAGGCTTATGGCAAGAAGTGATTAGAGCCAAATATCTTAAAAACTGTTCTGTGGCCACGGTGAAAATCAA
GTTCAGTGACTCCCCTATTTGGAAGGCTTTGCTCAAAGTGAAAGAACATTATATGGCTGGTAGGAGAGTGACCATTAGAT
CTGGTAATGTGGCCATGATTTGGCAGGACCCTGTTGGGGAACACCCACCTCTATGTGAGACGTATCCGGTCCTGTTTAGC
ATAGCTAATCATCCTGATGATACGATCACTCAATTTCGGGGCAGGGAAAAAGGGGTCATCTTCAGAAAAAGATTGAACCC
TGATTTAACTAGTCAGTTTGCTGGTCTTAATAGCATTATTGAGAGCATTGCTCCTTCCGTGGAACCTGATAAAATCAAAT
GGGTTCTTGGCCCCAAAGAGAAGTATACGACGAAAGCGATGTATTCTTACCTTGAGAGAAACATCTCTGGGTGTGATTAT
AGATGGATTTGGAAGGCCAGGTTGCCAATCAAAATACAGATCTTTTTGTGGCAATTGTTTCAAGACGCAATTCTAACCAG
AGATGTCATGAGACGCAGGAATTGGGCAGGCAATCCTCGCTGCTCATTCTGCGATTGTCGAGAGACCTATCTTCACTTAT
TCTTCCTATGCCCTGTCGCCAGGACTGTCTGGCGGACAGTAGGGGCGATGCTGGGTACTGACTTATGTCCCAACAACCTG
TGCCAGTTCTACTCTTGGTGCTATGCTTTTCTTCCCCAAGGGGAACGCCACTTCACTGTGGGTTTGGCAGCTGTCTGCTG
GGCTATTTGGAACCGCAGAAACCAAGTTACCTTTGAGCACAAGAAAATGTCATCTCCTTTCGAGATTGTCTTCACAGCTT
GTGTACACTTGAAATACTGGGCGGGTCTATTGAAAGGCTCGGAGCGGGAAGAACTGGAGCACGGCGCACTGCTGCTGAGG
GACAACGCCATGAGGATGATGAGGCTGTGCGCATCAGCTCACACTGAGAGAAGCTCGGATTGAAGATTGAACAAGACTGA
TCGTGGGATTCTGGATCTGGAGTTTGGCGCCTTCTGCTGTGGCGACTTTGTGCCTTTTACCTGTGGTCCTTTTGAGTTGG
TCGATCTCGACTACTTTGTGTTGGTGTTTCTCTGAACTGTAGTCACTTGCTTAAATGATGTCTCAGGGTTTTCGCCCCAC
AGTAGGTGTTTCGATTGCGAGCATTTATGGTGGGTTTCCCTGGGATGCTTGAACCCGTTTTTTTCCTTTCCCTTTCGTTT
TGTTCTGGAACTCGATCTGTATTTCTGTTATTCAGTTAATGGAAAGGGGATTAACCCGGTTCAAAAAAACATGCAAACAT
GCGTGACACATTTAATAAATAATTTTTAAAAATACAGTAATCAAGCACAATAAACCATATGTATTTTTAGTTTTAGCTCT
CATATTATTTCTCCGAATGTTCTTATTTCCATAAAATCAATATCTTTGAAATATAGTGCAAAATATTCCCGCAGCAACGT
GCGGGGCATCATCTAGGTCTAAAAAAAAGGTTT-GCCAGCCTGAAACACTGAGACAATTTACCGAGCCACGATGAAAATA
TTGTATCAGTGGATGCAAACAAATTCTTACATCCGTTGGAAGCGATTCCCTCTATATTTTTTTCCAAAAAGGATCAAATC
TATTATAAAAAGGAATCGAACGTACAAAGGATATCAATCATGTCGAATTCGAGAAGGATCAAAACCCGAAAGACAAATTC
AAAGAAGCGCCAGCCTCAGCACTGCACCTGCAAGGACTAAAACCCCTAACTAAACTACTAACCAAAGCGGGGGCATCAAG
ATTCTCCTCCCCGCCACCGGGCACCGAAGTGGCTGGCAGAGGGGAGGTCAATTTACGGTCTCACTAGTGAAGCTTCAAGG
GGAGAGTTTGCCCGGGTTGGATGAGTATACTGGGTATTGGACAGAATTAGATGGACGCAAAATTTAGTCATGTGGATTTC
TCTCAACATGCAAACATGACACCTCATCAAGCAACATGCATTATAAAATGCCCCTTAAACATTCAATGAGTAATAGGAAA
GGTTCACCTCAACATGCAAACATGCGTGACACATTTAATAAATAATTTTAAAAAAATACAGTAATCAAGCACAATAAACC
ATATGTATTTTTAGTTTTAGCTCTCATATTATTTCTCCGAATGTTCTTATTTCCATAAAATCAATATCTTTGAAATGTAG
TGCAAAATATTCCCGCAGCAACGTGCGGGGCATCATCTAGTTCTAAAAACCAGGTTTGCCAGCCTGAAACGCAGAGACAA
TTTACCGAGCCACGATGAAAATA---------------------------------------------------------
--------------------------------------------------------------------------------
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----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------S----S-S-------------S------
-----------------S----S------------------------------------------S-----------SSS
SSSS-------------S---S----SS--S-------------------------------------------------
------SSSS----------------------------------------------S-----------S--------SS-
---S----SSSSSSSSSSSSSSS-----S---S--------S-------S---------------------------S--
--------------------S----------------S------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
---------S---S---------------------------------------------SSS------------------
-------------------------------------------------------------------S------------
-------------S-----------------------S-----------------------------S------------
----S------------------------------S-------S--------S---------SSSSSSSS----------
--------------------------------------------------------------------------------
----------------SS--------S--S--S------------S---SSSSSSSSS----------------------
---------------------S------S---------------------S--------------S--------------
----------------S--S--S-----------S----S------------------S------S-------SSS----
------S-------------------------------------------------------------------------
------S---------------S--S--------------------------------------------S---------
--------------------------------------------------------------S-----------------
----------S---------------------------------------------------------------------
---------S----S-SS-----S-------S------------------------------------------------
--------------------------------------------S--S---------------------------S----
---------------------------------------------------------S----------------------
------------------S------------------------------------------S------------------
-----------------------------S-----------------------------------------------S--
-------------------------------------------------------------------------S------
---------S------------------------S------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------S-SS-S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS
>forward_182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GCGTTTCGGGAGGAGACTAG----------------------------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_1233
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------TAGGAGGAGAGATCGGCGAA----------------------------
--------------------------------------------------------------------------------
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----
>forward_598
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AACGAACGATGGGGAAGCAA------------------------------------------
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----
>reverse_5653
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----------------------------------------------------ATCATCCGCTTCACCTGGAC--------
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