>input_sequence_56589
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--------------------------------------------------------ATGATGAGGACGGCGGCGGTGCTC
CTCCTCCTCTGCCTTTTCGCCTTCGCCGGCAGCGGCCGGGGCGGAGCGCGGGCCGCGGCCGTATGGGCGGAGGGGGTCAG
AGAGACGGCGGCGGTGGAGGTGGACCCTGCCTGGCGGTTCGCTAGCCCGCGGCTGCGGGACGCGTACGTCGCGCTGCAGA
CGTGGAAGCAGCAGGCCATCTTCTCAGACCCCAAGAACCTCACCGGCAACTGGGTGGGGCCCGGGGTCTGCAGCTACACC
GGCGTGTTCTGCGCGCCCGTTCCGTCGT---CGGGCGAGCTCGCCGTCGCCAGCGTCGACCTCAACCACGGCGACATCGC
GGGCTACCTCCCGTCGG------AGCTCGGCCTCCTCTGCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCG
GCCTCGTGCCCGACACCTTCCACCGCCTCGTCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTGGGCGCGTTC
CCGACCGTCGTGCTCGACCTCCCGTCCCTCCGGTTCCTCGACCTCCGCTTCAACGATTTCGAGGGCGGCGTGCCGCGGGA
GCTCTTCGACCGCCCGTTCGACGCCATCTTCCTCAACCACAATCGCCTCCGCTTCCAGCTCCCCGACAACTTCGGCAATT
CGCCCGTGTCCGTCATCGTCCTCGCCAACAACCACTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGACACG
CTCAACGAGATCCTCCTCATCAACAACGGCCTCAGCTCGTGCCTCCCGCCGGAGGTCGGGATGCTCCGGGAGGTGACGGT
GTTCGACGTCAGCTTCAACGCCCTCGCAGGGCCGCTGCCGCCGGAGGTGGCCGGGATGCAAAAGGTGGAGCAGCTCGACA
TCGCGCACAACCTGCTGTCGGGGACCGTGCCGGAGGCCGTGTGCGACCTCCCACGGCTCAAGAACTTCACCTTCTCCTAC
AACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCGCGTCGTGCCTGCCGACGGCGACCGCCGGAACTGCCTCCCCAACCG
CCCCGCCCAGCGCATGCCGCAGCAGTGCGCCGCTTTCTCTGCCCGCCCACCCGTCGACTGCGCAGCTTTCCAGTGCAAGC
CGTTTGTCCCACCTCGGCCACCCCCACCGCCAGCATACCCCGGCCCGTTGCCACCAGTATACCCCATGCCATACGCGTCG
CCGCCGCCGCCTCCACGTTACCGATGA-----------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr1A_1_TraesCS1A01G119600
TTCTTGTCTTAGATTTATCTAAATACAGATATATCTAGTTACGTTTTAGTGTTAGATATATTTGTATCTAGACAAATTTA
AGACAAGAATTTTGGGACGGAGGAAGTATGAAACTATGTCTTATGATATATGTTGGACATTCCAGATGTAAATCCTTTTC
TCCATAACTTGATCACAGTTTGTGAAGATTGACTTTAAAAAAAATTATATG--CACAACATTATGGAATAGAAAGAGTAA
TAATTTTGATATGAAATGCCAGGGATCTTCCGATCCTTACCCTTATTACAAGGAAAATAAAATATTGAATTGCTCTGTGA
GGACGCGACTCCCTAACGTTCCGTTGGCACACTGACAGGTGGCCTCAGGCCCACACATCAATGGCCCCATGTCAGGGGTG
CAGTACGTCAGACGATCCTGATCCGCTCTGTGATGCCTGTTGCATGCTTTACAAAAGAAATGCTAGACGTCACAGTGTGA
TGTAGATTCCACAAAATTCATATGGATGAAGGTGCCCCAGCAATTCAAATTTCAGATTTTCACTCTTATTATAGTACTTC
CTTCGTCATAAAATTCTTGTCTTAAATTTGTTTAAATACAAATGTATTAAGTCACGCCTCTCAGCCCTCTGGCCATGTCC
AGTACAGTCCACTGAACC--------CACGCCATCACCGCCATAATTACCGTAGTACTG-----TACTCCGGAGACAAAT
GCGGGGGACCCCAAGCCTATCATAAATCCTCTCCCCCCACCATAAATCTCCCCCCGCCGCGCCCCGTCTCCCCGCTACGC
GTCCCCCGCCAAACTCCCACCCCGCTCGCTCTCCCTCTGAGCTGTGGCATAGCTGTCTTCCTCTCCCCACCTCCACCTCC
ACCTCCACC-CCCTCGTCCTCCCTCCTCCTCCGTCCATCCACAACTCAGTTGCTGCCAAATCTTAGCGCTGCACCCACCG
CCTCCGTTCGGTTCCCTGGATTCTTCTCCGCGCCCGCGAGAAATCTGGGTGATGAGATGATGAGGACGGCGGCGGTGCTC
CTCCTCCTCTGCCTTTTCGCCTTCGCCGGCAGCGGCCGGGGCGGAGCGCGGGCCGCGGCCGTATGGGCGGAGGGGGTCAG
AGAGACGGCGGCGGTGGAGGTGGACCCTGCCTGGCGGTTCGCTAGCCCGCGGCTGCGGGACGCGTACGTCGCGCTGCAGA
CGTGGAAGCAGCAGGCCATCTTCTCAGACCCCAAGAACCTCACCGGCAACTGGGTGGGGCCCGGGGTCTGCAGCTACACC
GGCGTGTTCTGCGCGCCCGTTCCGTCGT---CGGGCGAGCTCGCCGTCGCCAGCGTCGACCTCAACCACGGCGACATCGC
GGGCTACCTCCCGTCGG------AGCTCGGCCTCCTCTGCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCG
GCCTCGTGCCCGACACCTTCCACCGCCTCGTCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTGGGCGCGTTC
CCGACCGTCGTGCTCGACCTCCCGTCCCTCCGGTTCCTCGACCTCCGCTTCAACGATTTCGAGGGCGGCGTGCCGCGGGA
GCTCTTCGACCGCCCGTTCGACGCCATCTTCCTCAACCACAATCGCCTCCGCTTCCAGCTCCCCGACAACTTCGGCAATT
CGCCCGTGTCCGTCATCGTCCTCGCCAACAACCACTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGACACG
CTCAACGAGATCCTCCTCATCAACAACGGCCTCAGCTCGTGCCTCCCGCCGGAGGTCGGGATGCTCCGGGAGGTGACGGT
GTTCGACGTCAGCTTCAACGCCCTCGCAGGGCCGCTGCCGCCGGAGGTGGCCGGGATGCAAAAGGTGGAGCAGCTCGACA
TCGCGCACAACCTGCTGTCGGGGACCGTGCCGGAGGCCGTGTGCGACCTCCCACGGCTCAAGAACTTCACCTTCTCCTAC
AACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCGCGTCGTGCCTGCCGACGGCGACCGCCGGAACTGCCTCCCCAACCG
CCCCGCCCAGCGCATGCCGCAGCAGTGCGCCGCTTTCTCTGCCCGCCCACCCGTCGACTGCGCAGCTTTCCAGTGCAAGC
CGTTTGTCCCACCTCGGCCACCCCCACCGCCAGCATACCCCGGCCCGTTGCCACCAGTATACCCCATGCCATACGCGTCG
CCGCCGCCGCCTCCACGTTACCGATGATTCTTTGACAACAGAAGCATTGCCGGTTTCACTTTCCCTTGCCGCACCCCTCG
CCGCCGGTGTGGAAGAGCCAGCGGAGCTCGCCGTCACAAAAGTACGTGGTCATTGTTGTTCGTGGATTACCAGTTCTTGA
TTGATAGCTACCGGCGTAAAGAAGAACGTGGTGCATATATCCTTTTCTTGTTTTTTTGCATTGGTTGGTGTCTGTTTTCC
GCATCGTCGTCTTCGATCATCCGTTTGCGCGGTGGCGATGGCGAAAAGGATTGGAGCATGGTGATAGGGAAATTTGAAAG
TTGGGAACAAATTGGGCTTGGATTGATGGCT---AATTGGGTTGTGAATAATAAACTGGTTGAGAGAGACAGGTTAAGCT
GAGACTGAGAAATCCATGGAAAAGTTGTGATGCGGGATGTATAGAATGA---TACTTTTAGTTCGGTAAA----------
AGGGTCAGAGATAAGTTTCTACATCAAGAGATTTGTCCTACTGAATTCCTCTTGTGTCACAGCTGCTTACTGTTATTCGA
TTATTATTATTAAGATATTTAGTCGGGCTTCTTGGAGAATGTT--CTCCTAACTGTTACTCTCTGCTCT---TACAAATT
TTGTACTATGACACTATAAATCTACTCCCTCTGTTTTCTTAGTCCGCATATAAAATTTAGTCAAAGTCAAGCTTTATAGA
GTTTGACTAACTTTATATTAAAAAGTATAAACATTCACAATATGAAATCAATATTATCAGATGCACCATGAAACGTATTT
TCATACTATATAGTTTTAGTATTGTAGGTGTTTATATTTTTTTATATAAATTTGATCAAAGTTTGTGCAGTTTGACTTTG
TCTAAATCTTATATGCGGAGTAAAAAGAAATGGAGGGAGTATCTATACTATCCTATACTGCTATCTCTTGATGTATCCCA
TGGTGTGCTTGTTAATTTAGCCGAGCCTAGATTATCTTTTGATGCATCCCATGGTGTGCTTGTTAATTTACCCGAGCCTG
GACGATCT
>chr1D_107
--------------------------------------------------------------------------------
--------------------------TATGAAACTATGTCTTATGATATATGTTGGACATTCTAGATGTAAATCTTTTTC
TCCATAACTTGATCAAAGTTTGTGAAGATTGACTTTTAAAAAAAATCTATATACACAACATTATGGAATAGAGGGAGTAA
TAATTTTGATATGAAATGTCAGGGACCTTTGGATCCTTACCCTTATTACAGGGCAA--AAAATGTTGGATTGCTCTA---
--------------------------------------------------------------------------------
-----------------------------------CCTGCTGCATGCTTTACAAAAAAGAATGTGCAAAATTCAT-----
-------------------ATATGGATGAATGTGCCCCAACAATCCAAATTCCAGATTT-CACTCTTACTATTAGTACTA
CTACTAGCTTTGGATTATGCACGCCACC---------------------------------CAGCCCTCTGGCCATGTCC
AGTACAGTCCACTGAACCACTGAACCCACGCCATCACCGCCATAATTACCGTAGTACTG-----TACTCCGGAGACAAAT
GCGGGGGACCCCAAGCCTATCATAAATCCTCT-CCCCCACCATAAATGTCCCCCCGCCGCGCCCCCTCTCCCCGCTACGC
GTCCCCCGCCAAACTCCCACCCCGCTCGCTCTCCCTCTGAGCTGTGGCATAGCTGTCTTCCTCTCCCCACTCCCACCTCC
ACCTCCACCCCCCTCGTCCTCGCTCCTCCTCCGTCCATCCACAACTCAATTGCTGCCAAATCTTAGCGCTGCACCCACCG
CCTCCGTTCAGTTCCCTGGATTCTTCTCCGCGCCCGCGAGAAATCTGGGTGATGAGATGATGAGGACGGCGGCGGTGCTC
CTCCTCCTCTGCCTTTTCGCCGTCGCCGGCAGCGGCGGGGGCGTAGCGCGGGCCGCGGCCGTATGGGCGGAGGGGATCAG
GGCGACTGCGGCGGTGGAGGTCGACCCTGCCTGGCGGTTCCCTAGCCCGCGGCTGCGGGACGCGTACGTCGCGCTGCAGA
CGTGGAAGCAGCAGGCCATCTTCTCCGACCCCAAGAACCTCACCGGCAACTGGGTGGGGCCCGGGGTCTGCGGCTACACC
GGCGTGTTCTGCGCGCCCGTCCCGTCGT---CGGGCGAGCTCGCCGTCGCCGGCGTCGACCTCAACCACGGCGACATCGC
GGGCTACCTCCCGTCGG------AGCTCGGCCTCCTCTGCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCG
GCCTCGTGCCCGACACCTTCCGCCGCCTCGTCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTGGGCGCGTTC
CCGACCGTCGTGCTCGACCTCCCGTCCCTCAGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGCGTGCCGTCGGA
GCTCTTCGACCGCCCGTTCGACGCCATCTTCCTCAACCACAATCGCCTCCGCTTCCAGCTCCCCGACAACTTCGGCAATT
CGCCCGTGTCCGTCATCGTCCTCGCCAACAACCACTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGACACG
CTCAACGAGATCCTCCTCATCAACAACGGCCTCACCTCGTGCCTCCCGCCGGAGGTCGGGATGCTCCGGGAGGTGACGGT
GTTCGACGTCAGCTTCAACGCCCTCGCAGGCCCGCTGCCGCCGGAGGTGGCCAGGATGCAAAAGGTGGAGCAGCTCGACA
TCGCGCACAACCTGCTGTCGGGGACCGTGCCGGAGGCCGTGTGCGACCTCCCACGGCTCAAGAACTTCACCTTCTCCTAC
AACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCGCGTCCTGCCTGCCGACGGCGACCGCCGGAACTGCCTCCCAAACCG
CCCCGCCCAGCGCATGCCGCAGCAGTGCGCCGCTTTCTATGCCCGCCCGCCCGTCGACTGCGCAGCTTTCCAGTGCAAGC
CGTTTGTCCCACCTCGGCCACCCCCACCGCCAGCATACCCCGGCCCGTTGCCGCCAGTGTACCCCATGCCATACGCGTCG
CCGCCGCCGCCTCCACGTTACCGATGATTCTTTGACAGCAGAGGCATTGCCAGTTTCACTTTCCCTTGCCGCACCCCTCG
CCGCCGGTGTGGAAGAGCCAGCGGAGGTCGCCGTCACAAAAGTACGTGGTCATTGTTGTTCGTGGATTACCAGTTCTTGG
TTGATAGCTACCGGCGTAAAGAAGAACGTGGTGCATATATCCTTTTCTTGTTTTTTTGCATTGGTTGGTGTCTGTTTTCC
GCATCGTCGTCTTCGATCATCCGTTTGCGCGGTGGCGATGGCGAAAAGGATTGGAGCATGGTGATAGGGAAATTTGAAAG
GTGGGAACAAAGTGAGCTTGGATTGATGGCTGCTAATTGGGATGTGAATAATAAACTGGTTGAGAGAGACAGGTTAAGCT
GAGATTGAGAAATCCATGGAAAAGTTGTGATGCGGGATGTATAGAACGATACTACTTTTAGTTCGGTAAA----------
AGGGTCAGAGATAAGTTTCTACATCAAGAGATTTGTCCTACTGAATTCCTCTTGTGTCACAGCTGCTTACTGTTATTCGA
TTATTATTATTAAGATATTTAGTTGGGCTTCTTGGAGAATGTTGTCTCCTAACTGTTAGTCT--GCTCTTAGTACAAATT
TTGTACTATGACACTA--AATC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TATCTATACTATCCTATACTGTTATCTCTTGATGTATCTCA
TGGTGTGCTTGTTAATTTAGCCGAGCCTAGATTATCTTTTGATGCATCCCATGGTGTGCTTGTTAATTTACCCGAGCCTG
GACGATCT
>chr1B_631
CCAGTACAGTCACTAAT---------------------------------------------------------------
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----------------CCACTGAACCCACGCTATCACCGCCATAATTACCGTAGTAGTACTGTATACTCCGGAGACAAAT
GCGGGGGACCCCAAGCCTATCATAAATCCTCTCTCCCCACCATAAATCTGCCCCCGCCGCGCCCCCTCTCCCCGCTACGC
GTCCCCCGCGAAACTCCCACTCCGCTCGCTCTCCCTCTGAGCTGTGGCATAGCTGTCTTCCTCTCCCCACTTCCACTT--
----------CCCTCGTCCTCGCTCCTCCTCCGTCCATCCACAACTCAATTGCTGCCAAATCTTAGCGCTGCACCCACCG
CCTCCGTTTGGTTCCCTGGATTCTTCTCCGCGCCCGCGAGAAATCTGGGTGATGAGATGATGAGGACGGCGGCGGTGCTG
T---TCCTCTGCTTTTTCGCCTTCGCCGGCAGCGGCTGGGGCGGAGCGCGGGTCGCGGCCGTATGGGCGGAGGGGGTCAG
ACAGACGGCGGCGGCGGTGGTGGACCCTGCCTGGCGCTTCCCTAGCCCGCGGCTGCGGGACGCGTACGTCGCGCTGCAGA
CATGGAAGCAGCAGGCCATCTTCTCCGACCCCAAGAACCTCACCGGCGACTGGGTGGGTCCCGCGGTCTGCGGCTACACC
GGCGTGTTCTGCGCGCCTGCTCCGTCGT---CGGGCGAGCTCGCCGTCGCCGGCATCGACCTCAACCACGGCGACATCGC
GGGCTACCTCCCGTCGG------AGCTCGGCCTCCTCTGCGACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCG
GCCTCGTGCCCGACACCTTCCGCCGGCTCGTCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTGGGCGCGTTC
CCGACCGTCGTGCTCGACCTCCCGTCCCTCAGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGCGTGCCGCGGGA
GCTCTTCGACCGCCCGTTCGACGCCATCTTCCTCAACCACAATCGCCTCCGCTTCCAGCTCCCCGACAACTTCGGCAATT
CGCCCGTGTCCGTCATCGTCCTCGCCAACAACCACTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGACACG
CTCAACGAGATCCTCCTCATCAACAACGGCCTCACCTCGTGCCTCCCGGCGGAGGTCGGGATGCTCCGGGAGGTGACGGT
GTTCGACGTCAGCTTCAACGCCCTCGCAGGGCCGCTGCCGCCGGAGGTGGCCGGGATGCAAAAGGTGGAGCAGCTCGACA
TCGCGCACAACCTGCTGTCGGGGACCGTGCCGGAGGCCGTGTGCGACCTCCCACGGCTCAAGAACTTCACCTTCTCCTAC
AACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCGCGTCGTGCCTGCCGACGGCGACCGCCGGAACTGCCTCCCCAACCG
CCCCGCCCAGCGCATGCCGCAGCAGTGCGCCGCTTTCTATGCCCGCCCGCCCGTCGACTGCGCAGCTTTCCAGTGCAAGC
CGTTTGTCCCACCTCGGCCACCCCCACCGCCAGCATACCCCGGCCCGTTGCCGCCAGTGTACCCCATGCCATACGCGTCG
CCGCCGCCGCCTCCACGTTACCGATGATTCTTTGACAACAGAAGCATTGCCAGTTTCACTTTCCCTTGCCGCACCCCTTG
CCGCCGGTGTGGAAGAGCCAGCGGAGCTCGCCGTCACAAAAGTACGTGGTCATTGTTGTTCGTGGATTACCAGTTCTTGA
TTGATAGCTACCGGCGTAAAGAAGAACGTGGTGCATATATCCTTTTCTTGTTTTTTTGCATTGGTTGGTGTCTGTTTTCC
GCATCGTCGTCTTCGATCATCCGTTTGCGCGGTGGCGATGGCGAAAAGGATTGGAGCATGGTGATAAGGAAATTTGAAAG
GTGGGAGCAAATTGGGCTTGGATTGATGGCT---AATTGGGTTGTGAATAATAAACTGGCTGAGAGAGACAGGTTAAGCT
GAGATTGAGAAATCCATGGAAAAGTTGTGATGCGGGATGTATAGAATGA---TACTTTTAGTTCGGTAAAGCTCTAGTTG
AGGGTCAGAGATAAGTTTCTACATCAAGAGATTTGTCCTACTGAATTCCTCTTGTGTCACAGCTGCTTACTGTTATTCGA
TTATTATTATTAAGATGTTTAGTTGGGCTTCTTGGAGAATGTTGTCTCCTAACTGTTACTCT--GCTCT---TACAAATT
TTGTACTATGACACTATAAATC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------TATCTATACTGTCCTATACTGTTATCTC--GATGTATCCCA
TGATGTGCTTGTTAATTTAGCCGAGCCTAGATTATCTTTTGATGCATCCCATGGTGTGCTTCTTAATTTACCCGAGCCTG
GACGAT--
>chr3B_1089
GGGCG---------------------------------------------------------------------------
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----------------------------------------------------------------------AGGGGGCCGG
AACGGCGGCGGCGGTGGAGGTGGATCCGTCGTGGCAGTTCCCGAGCCGCCGCATCGAGGACGCCTACGCCGCGCTGCAGA
CCTGGAAGCGCCACGCCATCTTCTCCGACCCGAAGAACCTCACCGCCGACTGGGCGGGCCCGGACGTCTGCAATTACACG
GGCGTCTTCTGCGCGCCGCTGCCGTCCGACCCGCGCGTGCTCGCCGTCGCCGGCGTTGACCTCAACCACGGCGACATCGC
GGGCTACCTCCCGCCGG------AGCTCGGCCTGCTCGCCGACCTCGCGCTGCTGCACCTCAACTCCAACCGCTTCTGCG
GCATGATCCCGGGAACGCTCCGCCGCCTCAGCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGGCCCTTC
CCCGAGGTCGTGCTCGACATGCCGGCGCTCCGGTTCCTCGACCTCCGGTTCAATGAGTTCGAGGGCGGCGTGCCCAGCCG
CCTCTTCGACAAGCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGAGATTCCGGACAACATCGGCAACT
CGCCGGTCTCCGTCCTCGTCCTCTCGCACAACACCTTCGGCGGATGCCTCCCCGCCAGCCTCGCCAACATGTCCGGCACG
CTCAACGAGATCTTGCTCATCAACAACGGCCTCGAGTCATGCCTGCCGCCGGAGCTCGGCCGCCTGCGGGAGCTCACGGT
GCTCGATGTCAGCCACAACCAGCTCGCCGGCCCGCTCACGCAGGAGGTGGCGGGGCTGAGGAAGCTGGAGCAGCTCAACG
TCGCGCACAACCTGCTCTCCGGGCCGATACCACAGGCCGTGTGTGCTCTGCCGCGGCTCAAGAATTTCACCTTCTCATAC
AACTTCTTCACCGGGGAGCCGCCGGCGTGCGCGCGCGTCGTGCCTCGGGGCAGCGACCGGGACAACTGCCTGCCGAATCG
CCCCGCTCAGCGGACGCGGCAGCAGTGTGCCGCCTTCTATGCCCACCCGCCCGTCAACTGTGCGGCGTTCCAGTGCAAGC
CGTTCGTCC-----------------------------------------------------------------------
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--------
>chr3A_1108
GACGGCA-------------------------------------------------------------------------
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--------CGGCGGCGGCGGTGGATCCGTCGTGGCGGTTCCCGAGCCGCCGCATCGAGGACGCCTACGTGGCGCTGCAGA
CCTGGAAGCGCCACGCCATCTTCTCCGACCCGCGGAACCTCACCGCCGACTGGGCCGGCCCGGACGTCTGCAACTACACG
GGCGTCTTCTGCGCGCCGCTCCCGTCCGACCCGCGCGTGCTCGCCGTCGCCGGCGTCGACCTCAACCACGGCGACATCGC
CGGCTACCTCCCGCCGG------AGCTCGGCCTGCTCGCCGACCTCGCGCTGCTGCACCTCAACTCCAACCGCTTCTGCG
GCATGCTCCCGGGCACGCTCCGCCGGCTCGGCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGGCCGTTC
CCCGAGGTCGTGCTTGACATGCCGGCGCTCCGGTTCCTCGACCTCCGGTTCAACGAGTTCGAGGGCGCCGTGCCCAGCCG
CCTCTTCGACCGCCCGCTCGACGCCATCTTCCTTAACCACAACCGCTTCCGCTTCGAGATTCCGGACAACATCGGCAACT
CGCCGGTCTCCGTCCTCGTCCTCTCGCACAACACCTTCGGCGGATGCCTCCCCGCTAGCCTCGCCAACATGTCCGGCACG
CTCAACGAGATCTTGCTCATCAACAACGGCCTCGAGTCGTGCCTGCCGCCGGAGATCGGCCGCCTGCGGGAGCTCACGGT
GCTCGATGTCAGCCACAACCAGCTCGCCGGCCCGCTCACGCAGGAGGTGGCGGGGCTGAGGAAGCTGGAGCAACTCAACG
TCGCGCACAACCTGCTCTCCGGGCCGATACCCCAGGCCGTGTGTGCTCTGCCGCGGCTCAAGAACTTCACCTTCTCATAC
AATTTCTTCACCGGGGAGCCGCCGGCGTGCGCGCGCGTCGTGCCCCGGGGCAGCGACCGGGACAACTGCCTGCCGAATCG
CCCTTCTCAGCGGACGCGGCAGCAGTGCGCCGCCTTCTACGCCCACCCGCCCGTCAACTGTGCGGCGTTCCAGTGCAAGC
CGTTCGTCCCGCCT------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr3D_1110
--------------------------------------------------------------------------------
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-----CGGCGGCGGTGGAGGTGGATCCGTCGTGGCGGTTCCCGAGCCGCCGCATCGAGGATGCCTACGTGGCGCTGCAGA
CCTGGAAGCGCCACGCCATCTTCTCCGACCCGAAGAACCTCACCGCCGACTGGGCCGGCCCGGACGTCTGCAACTACACG
GGCGTCTTCTGCGCGCCGCTGCCGTCCGACCCGCGCGTGCTCGCCGTCGCCGGCGTCGACCTCAACCACGGCGACATCGC
GGGATACCTCCCGCCGG------AGCTCGGCCTGCTCGCCGACCTCGCGCTGCTGCACCTCAACTCCAACCGCTTCTGCG
GCATGATCCCGGGCACGCTCCGCCGGCTCAGCCTCCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTGGGCCCCTTC
CCCGACGTCGTGCTCGACATGCCGGCGCTCCGGTTCCTCGACCTCCGGTTCAACGAGTTCGAGGGCGCCGTGCCCAGCCG
CCTCTTCGACCGCCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGAGATTCCGGACAACATCGGCAACT
CGCCGGTCTCCGTCCTCGTCCTCTCGCACAACACCTTCGGCGGGTGCCTCCCCGCCAGCCTCGCCAACATGTCCGGCACG
CTCAACGAGATCTTGCTCATCAACAACGGCCTCGAGTCATGCCTGCCGCCGGAGCTCGGCCGCCTGCGGGAGCTCACGGT
GCTCGATGTCAGCCACAACCAGCTCGCCGGCCCGCTCACGCAGGAGGTGGCGGGGCTGAGGAAGCTGGAGCAGCTCAACG
TCGCGCACAACCTGCTCTCCGGCCCGATACCGCAGGCCGTGTGCGCGCTGCCGCGGCTCAAGAATTTCACCTTCTCATAC
AACTTCTTCACCGGGGAGCCGCCGGCGTGCGCGCGCGTCGTGCCCCGGGGCAGCGACCGGGACAACTGCCTGCCGAATCG
CCCCTCTCAGCGGACGCGGCAGCAGTGCGCCGCCTTCTACGCCCACCCGCCCGTCAACTGTGCGGCGTTCCAGTGCAAGC
CGTTCGTCC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr6D_1135
--------------------------------------------------------------------------------
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------------------------------CTGGCCGTTCCCGAACCCGCGCCTGCGGGCGGCCTACGCGGCGCTCCAGG
CCTGGAAGCAGACGGCCATCTTCTCCGACCCGGCCAACTTCACCGCCAACTGGCTCGGCCCCGACGTCTGCCGCTACAAC
GGCGTCTACTGCGCGCCCGCCCCGTCCGCCTACGGTGCGGTGACCGTCGCCGGGATCGACCTCAACCACGCCGACATCGC
GGGCTACATCCCCGCCTCCCTCCCGCTCGGCCTCCCG---GACCTGGCGCTGCTGCACCTCAACTCCAACCGCTTCTGCG
GGGTGGTGCCCGACACCTTCCGCCGCCTGCGCCTGCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGCGCCTTC
CCGGAGGTGGTGCTCGCGCTGCCGTCCCTCAAGTACCTCGACCTCCGCTTCAACGACTTCGAGGGCGCCATCCCGCCGGC
GCTCTTCGACCGCCCGCTCGACGCCATCTTCCTCAACTCCAACCGCCTCCGCCACCCCATCCCCGCCAACCTCGGCAACT
CGCCGGCCTCCGTCGTCGTGCTCGCGCACAACCGGCTCGGCGGCTGCATCCCGCCCTCCATCGGGAGGATGGCGGACACG
CTCAACGAGATCGTGCTCATCGACGACCTGCTCACCGGCTGCGTCCCGCCGCAGGTCGGGCTGCTCAAGAAGGTGACGGT
GTTCGACGTCAGCGGCAACCGGCTCCAGGGCGCGCTCCCCGCGGCCGTCGGCGGGATGGCCGCCGTCGAGGAGCTCGACG
TCGCCGGGAACCTCTTCGAGGGCGCCGTGCCGGCCGCCGTCTGCGGCCTCGCCGGGCTCAAGAACTTCACCTACGCCGAC
AACTTCATCACCTCGCGCCCCGGCT---------GCGCGCAGGCCACCGCCGACGGCGCGTGGAACTGCATCCCCGGGGC
GCCCGCGCAGCGCCCAGCGGCGCAGTGCGCCGCCGCGGCCTCCCACCCGT---TCGACTGCAGCA---------------
--------------------------------------------------------------------------------
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--------
>chr3D_1142
--------------------------------------------------------------------------------
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-------------------------------------TTCGCCAACCCGCGCCTCCGCGACGCCTACGTCGCGCTGCAGG
CCTGGAAGCGC---GCCATCCTCTCCGACCCGCGCAACCTCACCGCCTCCTGGTCCGGCCCCGACGTCTGCTCCTACTAC
GGCGTCTTCTGCGCGCCGTCCCAGGCGGACCACTACCTCACCGTCGTCGCCGCCGTCGACCTCAACCACGCCGACCTCGC
CGGCCACCTCCCGGAGG------CGCTCGGCAGGCTCGCCGACCTCTCCGTCTTCCACGTCAACTCCAACCGCTTCTGCG
GCCTCGTGCCGGCCTCCTTCCACGCCATGCACCTCCTCCACGAGCTCGACCTCAGCAACAACCGCCTCGTCGGCGCCTTC
CCCGACGTCGTGCTCCGCCTGCCCAGCCTCAGGTACCTCGACCTCCGCTACAACGAGTTCGAGGGCCCCGTGCCCAAAGA
GCTCTTCGACCTCCCGCTCGACGCCATCTTCATCAACTCCAACCGCTTCCGCTTCCAGATCCCCGACAACGTCGGCAACT
CGCCGGCGTCTGTCCTCGTGCTCGCCAACAACGACTTCGGCGGCTGCCTCCCGGCCTCCGTCGCCAACATGTCCGGCACG
CTCAACGAGATCATACTCATGAACACCGGGCTCAAGTCCTGCGTCCCCCCGGAGCTCGGCATGCTCACCGCCCTCACCGT
GCTCGACGTCAGCCACAACCAGCTCATGGGCGCCATCCCCGCCGAGCTCGCCAACCTCCACAGCATCGAGCAGCTCGACC
TTGGTCACAACCGCCTCAGTGGCGACGTGCCGGAGGGCATCTGCCACCTGCCGCATCTCCAGAACTTCACCTACTCCTAC
AACTACATCACCGGCGAGCCGCCG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------
>chr3B_1142
--------------------------------------------------------------------------------
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-------------------------------------TTCGCCAATCCGCGCCTCCGCGATGCCTACGTGGCGCTGCAGG
CCTGGAAGCGC---GCCATCCTCTCCGACCCGCGCAACCTCACCGGCTCCTGGTCGGGCCCCGACGTCTGCTCCTACTAC
GGCGTCTTCTGCGCGCCGTCCCAGGCGGACCATTACATCACCGTCGTCGCCGCCGTCGACCTCAACCACGCCGACCTCGC
CGGCCACCTCCCGGAGG------CGCTCGGCAGGCTCGCTGACCTCTCCGTCTTCCACGTCAACTCCAACCGCTTCTGCG
GCCTCGTCCCGGCCTCCTTCCACGGGATGCACCTGCTCCACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGCGCCTTT
CCCGACGTCGTGCTCCGCCTGCCCAGCCTCAGGTACCTCGACCTCCGCTACAACGAGTTCGAGGGCCCCGTGCCCAAAGA
GCTCTTCGACCTCCCGCTCGACGCCATCTTCATCAACTCCAACCGCTTCCGCTTCCAGATCCCCGACAACGTCGGCAACT
CACCGGCGTCTGTCCTCGTGCTCGCCAACAACGACTTCGGCGGCTGCCTCCCGGCTTCCGTCGCCAACATGTCCGGCACG
CTCAATGAGATCATACTCATGAACACCGGGCTAAAGTCGTGCGTCCCCCCGGAGCTCGGCATGCTCACCGCCCTCACCGT
GCTCGACGTCAGCCACAACCAGCTCATGGGCGCCATCCCCGCCGAGCTCGCCAACCTCCACAGCATCGAGCAGCTCGACC
TTGGTCACAACCGCCTCACCGGCGACGTGCCGGAGGGGATCTGCCACCTGCCGCATCTCCAGAACTTCACCTACTCCTAC
AACTACATCACCGGCGAGCCGCCGGTGTGCATGCACGTCAAGGCATTGGA---CGATCGCCGGAACTGCATCCCGAACCG
CCCTGACCAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr3A_1142
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-------------------------------------TTCGCCAACCCGCGCCTCCGCGACGCCTACGTCGGGCTGCAGG
CCTGGAAGCGC---GCCATCCTCTCCGACCCGCGCAACCTCACCGCCTCCTGGTCCGGCCCCGACGTCTGCTCCTACTAC
GGCGTCTTCTGCGCGCCGTCCCAGGCGGACCACTACCTCACCGTCGTCGCCGCCGTCGACCTCAACCACGCCGACCTCGC
CGGCCACCTCCCGGAGG------CGCTCGGCAGGCTCGCCGACCTCTCCGTCTTCCACGTCAACTCCAACCGCTTCTGCG
GCCTCGTGCCGGCCTCCTTCCACGCCATGCACCTCCTCCACGAGCTCGACCTCAGCAACAACCGCCTCGTCGGCGCCTTC
CCCGACGTCGTGCTCCGCCTGCCCAGCCTCAGGTACCTCGACCTCCGCTACAACGAGTTCGAGGGCCCCGTGCCCAAAGA
GCTCTTCGACCTCCCGCTCGACGCCATCTTCATCAACTCCAACCGCTTCCGCTTCCAGATCCCCGACAACGTCGGCAACT
CGCCGGCCTCCGTCCTCGTGCTCGCCAACAACGACTTCGGCGGCTGCCTCCCGGCCTCCGTCGCCAACATGTCCGGCACG
CTCAATGAGATCATACTCATGAACACCGGGCTCAAGTCCTGCGTCCCCCCGGAGCTCGGCATGCTCACCGCCCTCACCGT
GCTCGACGTCAGCCACAACCAGCTCATGGGCGCCATCCCCGCCGAGCTCGCCAACCTCCACAGCATCGAGCAGCTCGACC
TTGGTCACAACCGCCTCACCGGCGACGTGCCGGAGGGGATCTGCCACCTGCCGCATCTCCAGAACTTCACCTACTCCTAC
AACTACATCACCGGCGAGCCGCCGGTGTGCATGCACGTCAAGGCATTGGA---CGATCGCCGGAACTGCATCCCGAACCG
CCCTGACCAG----------------------------------------------------------------------
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>SNPs
SS-S-SSSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S-----------S-----
---------------S--------------------S-------S-S---S---------------------SS------
------------------S------S---SS-------------------S--S--SS-----S---S--------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----------------S-S-SSS-SS-SSSSS--SSSSSS
SSSSSSSSSSSSSSSSSSS-----------S--------S----S------S-------S--------S---SSSSSS-S
--S-SSSS-SSSSS-SS--SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
----------------------------------------------------------------------S---------
---------------------S--------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------------------------------------------S----------------------------
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--------------------------------------------------------S-----------------------
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----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------S-------------------------------
----------------------------------------------------S-----S---------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
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S-------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------SS----------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S-------------------
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>forward_382
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------------------------------------------CCTCAGGCCCACACATCAAT------------------
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>reverse_2292
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---------------------------------------------------GGTTTCACTTTCCCTTGCCG---------
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--------
