>input_sequence_56540
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----------------------------------------------------------------ATGCCTT---------
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---CACTTCAGAAAGCTTTACCTCCAGAACTTGCCGATAATGCGCTTAGAGTAAGGCTCCTATCACACCTTTCTAATAGA
CAAATTACCCCCATCATGACCAGTACATGGTATTGGTAATGAGTAGTAAGTTCTGAAATTTCATTTCTGTAGTCACAGCA
GCCCTATCAGTTGGTT-TACCCTTTTAGCTTCAGCTTTTGCAAATCATGTCTAGTACTCTTGTGCACCTAGCTCTTCATC
ATCATTAGAATTAGCCACACAAAATAATAGATATATGATGGCATTTGAGGAGAAAATGTTATCGGTACTTATAAGCTCTT
TTTCTTATGCTGTAGTTATACCGTGAATGCTTAAGGAGGGCTAAGTTCATCGGTAGTCAGGTAAGCATACTTTCGTTCCA
ACTATCGTATTATCTT---GTACATAATGTTTCTTAACACACACTCAGCTTGCTCCGTTCTCCTCAAGTATCTTTAACCT
GAGAGT-TTCCAGGAGAACTA---ACAGTCTGGTCGCTCCATCGTCAGTTCCTGTGTCACTTAAGCATCTGTACATAGAT
TTTGAATTACTTCACATTGTTTTC-TTCTAATAAAAACTGCTCCAAGGAATCAATGTTCTCTAGCAGC---ATAACATG-
-TAAGAGGGCTTATTGTTTTCAGGCACTTTATAC-----------------GTTGCACCCTGAATATGCAAATTGTGTTT
TTCCATTTACAAGATGGAGAACCA--------GCTCCACAGTAGAATAAAAGGCCATCACAAATTAGAACTATTTTGTC-
--------------------------------------------------------------------------------
--------------------------------------------CTGTTTACCCTTGATGTTATGGGTAGGGGAGCCTTG
GCGCAGCGGTAAAAGTAGGGAAAGGCTGCTTACAAAAGACCAAAAATGGCCGGACCCTTCTGCGCAAGCGGGAGCTACGT
GCACCGGGCTGCCCTTTTTTTACCCTTGACATTATGGCATATTTGTGTAACTTTATGAAGGTGCATGTTTGACTGAGTCA
TTGTATTTTATGACCCAGCAACATAATACAGGGCTTCTTGTTTCCATGGTGAGGCAACAGTTCAAGAAAAACATGCATGA
AACTGATCCAGAGAAGATACAGAAAATGAAGGATGAGTAAGTTACTGCTCCGTGGGCACCTTCAATATTTGGCTGTCTTA
CCTTTTTATTCTTGTTGGAACATACATTCTGAAATTATATCTTACTATGCAGTGCGGCACGGGGCCTTATCAATCACATA
ATATATGAATCTGGGAAGATGACGGGACGTAAATTCTCAGGTTAA-----------------------------------
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--------------------------------------------------------------
>chr5D_1_TraesCS5D01G097500
TGGTGGG-TTTTGGGCTGTTTAGAGAGGGGGGTTTACTGCAACATATAGAAGGCATCTGCGGTTACCCGGTTAACCGTTG
GAGTACCAAACGACCTCCAAATGGAACGAAACTTGACCGGTGGCCTCCCGATGGTATACCAAGGCCACTTGACAAACCTC
GGTCCATTCCGAGAATGTTTGACACCCGCTCATGAAAGAAAACAAGAGGGGTGCGCCGGAGGAGATGGGAGCGCCGGATT
GCAAAACGGACAACGGAAAAAATGCTCGGATGCATGAGACGAACACGTATGCAAATGAAATGCACATAATGACATGATAT
GAAATGCATGACATGAACAAAATGCAAAACGAAAGACAAAGCCCGACCACGAAGGGAATATCATAACACATAGCCGAAAA
TGGCAAGAGTTGGAGTTACAATTATGGAAAGTTACATCCGGGGTGTTACAATAGTCCTTGCTTTCGGAAGCTGGTACTTT
CATGCAATCTCTTACATGAAGCTTTG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ACCATGTTCCTTGGTGTGATTGTAAGGTTGTATCACATT
TTTGGATATGGTTTTGTTCC--TTGTTTCTTTTAAGTTGTTGATATATAGCTTTTGCGTGCATATTGGTATTTTTTTTAT
CTATACTCTTTTTTGTGGTAGTATGTTATACTGCTGTGTAAAGAGAGATCTGAAGGATTGGAATATCACCAAAGAACTAG
CCATGGACAGGGGTGCGTGGAAGCTTGCTATCCATGTGCCAGAACCATGAGTTGGCCACGAGATCTTATGGGTTTCGCCT
CTAGCCTACCCCAACTTGTTTGGGACTAAAGGCTTTGTTGTAGTTGTTGGTGTTGTTTTTTGTTGTTGTATGTTATACTG
GTGTGTGTGCCTTAAACATTTTTGTAATG-AAAAACAATGTCTGGATTGTTGTTCCTTAATTGCTCTAGGCGAATAATA-
-------AGATTTACATGTTTAAGTAACCGACT---TTCCTGTTGATTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CTATTTCAGAGTAAAGGAAGATGCCTT---------
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---CACTTCAGAAAGCTTTACCTCCAGAACTTGCCGATAATGCGCTTAGAGTAAGGCTCCTATCACACCTTTCTAATAGA
CAAATTACCCCCATCATGACCAGTACATGGTATTGGTAATGAGTAGTAAGTTCTGAAATTTCATTTCTGTAGTCACAGCA
GCCCTATCAGTTGGTT-TACCCTTTTAGCTTCAGCTTTTGCAAATCATGTCTAGTACTCTTGTGCACCTAGCTCTTCATC
ATCATTAGAATTAGCCACACAAAATAATAGATATATGATGGCATTTGAGGAGAAAATGTTATCGGTACTTATAAGCTCTT
TTTCTTATGCTGTAGTTATACCGTGAATGCTTAAGGAGGGCTAAGTTCATCGGTAGTCAGGTAAGCATACTTTCGTTCCA
ACTATCGTATTATCTT---GTACATAATGTTTCTTAACACACACTCAGCTTGCTCCGTTCTCCTCAAGTATCTTTAACCT
GAGAGT-TTCCAGGAGAACTA---ACAGTCTGGTCGCTCCATCGTCAGTTCCTGTGTCACTTAAGCATCTGTACATAGAT
TTTGAATTACTTCACATTGTTTTC-TTCTAATAAAAACTGCTCCAAGGAATCAATGTTCTCTAGCAGC---ATAACATG-
-TAAGAGGGCTTATTGTTTTCAGGCACTTTATAC-----------------GTTGCACCCTGAATATGCAAATTGTGTTT
TTCCATTTACAAGATGGAGAACCA--------GCTCCACAGTAGAATAAAAGGCCATCACAAATTAGAACTATTTTGTC-
--------------------------------------------------------------------------------
--------------------------------------------CTGTTTACCCTTGATGTTATGGGTAGGGGAGCCTTG
GCGCAGCGGTAAAAGTAGGGAAAGGCTGCTTACAAAAGACCAAAAATGGCCGGACCCTTCTGCGCAAGCGGGAGCTACGT
GCACCGGGCTGCCCTTTTTTTACCCTTGACATTATGGCATATTTGTGTAACTTTATGAAGGTGCATGTTTGACTGAGTCA
TTGTATTTTATGACCCAGCAACATAATACAGGGCTTCTTGTTTCCATGGTGAGGCAACAGTTCAAGAAAAACATGCATGA
AACTGATCCAGAGAAGATACAGAAAATGAAGGATGAGTAAGTTACTGCTCCGTGGGCACCTTCAATATTTGGCTGTCTTA
CCTTTTTATTCTTGTTGGAACATACATTCTGAAATTATATCTTACTATGCAGTGCGGCACGGGGCCTTATCAATCACATA
ATATATGAATCTGGGAAGATGACGGGACGTAAATTCTCAGGTTAAGAAAGTTGAAAGTAGACTTTCGGCAATATGCTGTA
CGAGTTGAACAGCGACTTGATCCTATGGCTGTTGAATTATTTTTCTCCTCCGACACAAGGACCATCTAATGCTTTTCTTT
GTTGTTGACTTAATAAAGCAGTGTTTTTTCATCAGTTGCATTTTACTGTGCTTCTGGATGTAATTGACCCACACATGCCA
AGCGTTAGCTGTTTTGTTAAGGTGTAAATCTTCAGCAATTTTAAGTGCTCCAATCTGTGTGAAAACGGATGCGTTGCTTG
AATTTTCTTCTTTTCATGATGTATTGAGGCAGTTTGAACACGTTCACTGGTTCCATTTCCATGGAGCTGAATCGGTCACA
AGTTTGCAAAACCGGAAATATTCGTTGCAGTCTTTTTTCGCTGTTTCTTGGGACGATT--GAACTTTGCAATCACTTGAA
GCTTCCAAAGGCTATTTGGGG--------TCTCACTGGATTGTCTGCAGTATTAAACAGCCTGCACAACTAAAGAGCTCA
TGCCTATGAAATGCCAGATTATAACACCGAAGATTGCCGTTGCCTTCAGTTTATTCTCTCATGGAACTGTTTTTAGGTGA
GCCTGAAGAGTGCACTCTTACCAAGTTCTACTGATACCATTGGTCTTTCTCAGTAAAAA---------------------
--------------------------------------------------------------------------------
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------------------------------------------------GCAAGAGAATCACTCTTACCAAGAGGCTTGAC
TTACCGGAGTAACAGAATGCATCCCA------------------------------------------------------
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---------------------------------------ATTATTCATGGTCACATCTGTAGATCCTGGATGATGCATCT
GCCCCTCTGCACCTAACATGCATGGATATGATATTTCAACTTTCTACTGAAGCAGCTACAACTCTATGGGAGGTATTTTG
TCACATTGCTCTCTGGAATCCGGAAAAGCGCGACAAAACGGATGGCGTTGCGTC--------------------------
--------------------------------------------------------------------------------
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----------------------------------------AAAGAGAT--GAGAGAGAGGGGTGTAGGAAAGGAACTGAT
GAGGATGATGAGTTCAGAGAGCTGGGGCCAGTTCTGGAATTCCCTGCACTGCAGGGTGTGAAACACTACTTACTGTCTGC
AGGTC---------------------------------------------------------------------------
--------------------------------------------------------------
>chr5D_1
TGGTGGGTTTTTGGGCTGTTTAGAGAGGGGGTTTTGCTGCAACACACAGAAGGCATCTGCGGTTACCCGGTTAACCGTTG
GAGTACCAAACGACCTCCAAATGGAACGAAACTTGACCGGTGGTCTACCGGTGGTATACCAAGGCCACTTGACAAGCCTC
GGTCCATTCCGGGAACGTTTGACACCCGCTCACGAAAGAAAGCAAGAGGGGTGCACCGGAGGAGATGGGAGCGCCGGATT
GCAAAACGGACAACGGGGAAAATGCTCGGATGCATGAGACGAACACGTATGCAAATGCAATGCACATGATGACATGATAT
GAAACGCATGACATGAACAAAATGCAAAACGAAAGACAAAACCCGACCACGAAGGGAATATCATAACACATAGCCGAAAA
TGGCAAGAGTTGGAGTTACAAATATGGAAAGTTACATCCGGGGTGTTACAACACTCCACCACTACGAGAGGATCTCGTCC
CGAGATCTAGGACTGAAAGAACTCCAGATATTCGGAACGGAGATGGTCCTCGCGTTCCCAGGTGGCTTCCCGGTCGGAAT
GGTGCGACCACTTCACTTTCAGGAATTTGATTGACTTGTTGCGAGTCTTGCGCTCAGTTTCTTCAGGAATAGCAACGGGG
TGCTCATGATAAGACAGATCTTCTTGGAGGTCAATCTCATCGAAGTTGATAGTGCGCTCAGGCGTCTTGAAGCACTTGCG
GAGCTGTGACACGTGGAACAGATCGTGCACGTTCGCAAAGTTGGAAGGAAGCTCAAGTTGATAGGCGAGGTCGCCTCTTT
TGCCAATGATCTTGAAAGGACCCACATATCTAGGGGCAAGCTTCCCTTTGATACCGAAGCAACGAGTGCCTTTCATTGGA
GAGACGCGGAGGTAGACATGGTCTCCTATATCGAAAGCCAAATCACGGTGCTTACTATCATAGTAACTCTTCTGGCGTGA
TTGCGCGGC-----------------------------------------------------------------------
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---TTTGAGATTGTCACGAATGACTTTACACATTTCTTCAGCTTCTGTGATTAAGTCATTGCCAAGAAGTTGGCGTTCAC
CAGTCTCTGACCAATTGAGAGGAGTACGGCACTTTCTGCCATAGAGGATCTCGAATGAGGCCTTGCCCGAACTCGCTTGG
AAGCTGTTGTTGTAAGAGAATTCAGCATATGGAAGACAATCTTCCCATTTCATGCCAAAGGAAATGACACAAGCCCTGAG
CATATCTTCAAGAATTTGATTGACTCGCTCGACTTGGCCACTAGTTTGAGGATGGAAAGCTATGCTGAAGCGAATGTTTG
TGCCCATGGCCTTCTGGAAAGAGTCCCAGAACTTAGAGGTGAAGATGCTTCCACGATCAGAAGAAATCAATTGTGGAATG
CCGTGCAAGGAGACAATTCTGGAGGTGTAAAGCTCTGCCAACTGAGCTGCTGTGATAGATTCTTTGATTGGAAGGAAATG
AGCCACTTTAGAAAGCTTGTCGATGACAATGAAGATAGCATCATTACCGCGCTTGGACTT--------------------
--------------------------------------------------------------------------------
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----------------------TGGAAAACCAGTCACGAAGTCCATTTCGATATGATCAAACTTCCACTCTGGGATAGCA
AGAGGTTGGAGGAGACCAGCTGGTCGTTGGTGTTCTGCTTTCACTCTTCGACAGACATCACATTCATTCACGAATTGAGC
AATTTCTCGCTTCATTCGAGTCCACCAATACGACTGC-----------------TTGAGG--------------------
--------------------------------------------------------------------------------
-------------------------------TCATGGTACATCTTCGTACTTCCAGGATGAATGGAAAGGAGAGAATTGT
GCGCCTCGTTCATTATGACTTTCCTTAGATCACCTTTAGGAGCCACAATCCGGTCTTCGAAGAATAAAGTGTCTCTG---
--------------------------------------------------------------------------------
------------------------------------------------------------------TCATCAATGCGATA
GCACTTGTATTTGTAAAGACCCTTGTCGATACCAC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GTTTCACCTTCTTCACCATGGCATCCAGGAGTTGTGCCTCACGAATTTG
ATCTTCCAAAGTAGGAGAGACTATGAGG-------------------TTGGCAAGAAA--GCCTTGAGGAACAACTTGGA
GATTCAGCTTGCGGAAAGCTTCACAAAGATCCGGTTGGAATGGCTTGAGAATTAAGCTGTTGCAATAAGCCTTCCTGCTT
AAAGCATCTGCAATG---------------ACATTGGCCTTGCCTGGAGTATATTCAATACTCGGATTGTACTCTTGAAT
CATTTCGACCCATCGAGTCTGCCTGAGGTTGAGGTTGGGCTGAGCGAAGATGTACTTGAGGCTCTTGTGATCGGTGAAAA
TGTCCACTTGTCTTCCCAACAAGAGATGTCTCCACGTTATCAATGCATGGACAACTGCCGCCAACTCAAGACCGTGAGTG
GGGTAGTTCTTCTCATTGGGCTTCAACTGACGAGAGGTATAGGCCACAACTTTCTTCTCTTGCATTAACACAGCACCGAG
ACCTTGGAGAGAAGCATCACAGAAAACTTCAAATGGCTTGGATTCATCAGGAGGAGTTAAGACAGGAGCTGTGACTAGTT
TCTCTTTGAGAGTGTTGAAAGCAACATCACACTCAGGAGACCAGACATACTTCACATCCTTCTGAAGGAGGTTGGAAAGA
GGCTTTGCAATCTTAGAGAAATTCTCAACAAATCTTCGGCAATAGCTTGCAAGACCAAGAAAGCTGCGAAGCTGCTTGAC
ATTTTGAGGGGGTTCCCAATTCACAATTGCGGACACCTTCTCAGGGTTAACAGCGATGCCCTTGGCAGAGATGATGTGGC
CAAGGAAAAGAACTTCATCAAACCAAAACTCACATTTGGAGAACTTCGCATAGAATTGATACTCTCTGAGCTTGTCGAGC
ACCAATCGCAAATGTTTGGCATGGTCCTTCTTATTCTTGGAGAAGACCAAGATATCAACGAGATACACCAGGACGAATTC
ATTGGTATAGGGGTTGAAGATGAAATTCATCATCCGAGAGAATACTGGAGGAGCATTGACAAGGCCGAAAGACACGACAG
TATATTCATAAGAACCAAAGCTTGTTCTGAATGCTGTCTTGGGAATATCTTCTTCACGAATGCGAATCTGATGATAACCC
ATACGAAGGTCAAGCTTGGAGAATACTTTAGCACCTTTGAGTTGCTCGAATAGCTCATTGATGTTGGGAAGTGGATACTT
GTTCTTGATTGTCTTCTTGTTCAATGGACGGTAGTCGACACAAAGTCGGTCCGTGCCATCCTTCTTCTTGACAAAAAGAA
CACCACAACCCCATGGAGATGAACTCGGTCTGATCAAACCCAGACGCTCTTGTTCATCGAGCTGTTTCTTCAATTCCTTC
AACTCGTTGGGTCCAAGCTTGTATGGACGCTTGCAAACGGGTTCCGTGTCAGGCTCTAGATCGATAACAAACTCAACTGG
CCGGTGAGGAGGCATACCCGGAAGCTCTTCTGGAAAGACATCTTGATACTCACAAACGACTGGAATCTGAGAGATGGCAT
TCAATTCGCCCTTCTCATTGAGAGAAAATAACCGAATGGTTTCATCACGAGCGGCATAAATAATCACATCCTCAGAAGAG
TGTGTCAATTGAATTTCCCTGGCAGCACAATCAAGTTGAGCCTTGTGCTTAGAGAGCCAGTCCATCCCGAGAATAAGATC
AATATCCGAGTCACCAAGAACAACTGGAGAAGACAGAAATTTATAGTTTCCCATCTTGATGGAAACATCCGGAACCATCA
TACTAGAACTCAAACGTTTACCCGGAGAAACGACATCCATGGGTTTACCCAGATGTGAACAAGTGAATTCATGCTTGGCA
AAAAACGGTCTTGACATGAAACAGAGCGAAGCACCGGTATCAAATAAAACTTTTGCAGGAAAATCATTAACTGGAAGATT
ACCCATTATCACATCAGTAGATTCCTCTGCTTGAGCTGCATTCATCATGTTCACCTTTGCAGACTTTGGATTATGCTTGA
CCACTGCATTGCTGGAAGATCTGACAGGAGGAGGAGGAGGCAGGCGCCTTTGGTTGAAGCACTTGTTAGCATAGTGACCT
TTCTGCTGACATTTGTTGCAAGTCACCTTTGAGAGTGGACGGTGATAAGGAGCATTGGACTTTGGAGCTTGATTCTGAGA
CTTGTTCTGATAGCCAGAGTTGGAAGAACCCGGAGACGACACGTGGCGGCGGCGGGGAAGACGGACGTGTCCGTCGGTGG
ACGTTTTCGTCCGGCGGCGCGGCGGGGACGAAGTTAGGGTTTCATCTGCGAACGTTTTTCGGGAGAGATGCCTATTTATA
GGTAGAGGGTGCTAGGAGAGTCCAAATGAGGTGCGGTTTTTGCCCATCCGATCGTGATCGAACGACCTACAGCATGGAAG
AGAGTTTGGTGGGTTTTGGGCTGTTTAGAGAGGGGGTTTTGCTGCAACACACAGAAGGCATCTGCGGTTACCCGGTTAAC
CGTTGGAGTACCAAACGACCTCCAAATGGAACAAAACTTGACCGGTGGTCTACCGGTGGTATACCAAGGCCACTTGACAA
GCCTCGGTCCATTCCGGGAACGTTTGACACCCGCTCATGAAAGAAAAC--AAGAG----GGGTGCACCGGAGGAGATGGG
AGCGCCGGATTGCAAAACGGACAACGGGGAAAATGCTCGGATGCATGAGACGAACACGTATGCAAATGCAATGCACATGA
TGACATGATATGAAATGCATGACATGAACAAAATGCAAAACGAAAGACAAAACCCGACCACGAAGGGAATATCATAACAC
ATAGCCGAAAATGGCCAAAGTTGGAGTTACAAATATGGAAAGTTACATCCGGGGTGTTACAA
>chr5A_450
ATG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------GTCCTTGCTTTGGGAAGCTGGTACTTT
CATGCAGTCTCTTACT----GCTTGG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------ACCATGGTCCTTGGTGTGATTGTAAGGTTGTATCACATT
TTTGGATATGGTTTTGTTCCCTTTGTTTCTTTTTAGTTGTTGATATATAGCTTTTCTGTGCATATTGGTA--TTTTTTAT
CAATACTCTTTTCTGTTGTAGTATGTTG----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TACTG
GTGTGTGTGCCTTAAACCTTTTTGTAATG-AAAACAT-TGTCTGGCTTGTTGTTCCTTAATTGCTGTAGGCGAATAATAA
ATGTTTGAGATTTACATGTTTAAGTAACCGACT---TT---GTTGATTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCATTTCAGAGTAAAGGAAAATGCCTT---------
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---CACTTCAGAAAGCTTTACCTCCAGAACTTGCCGACAATGCGCTTAGAGTAAGGATCCTATCACACCTTTCTAATAGA
CAAATTACCCCCATCATGACCTGTACATGGTGATGGTAATGAGTAGTAAGTTCTGAAATTTCATTTCTGTAGTCAGGGTA
GCTCTATCAGTTAAGTCTACCCTTTTAGCTTCAGCTTTTGCAAATCATGTCTAGTACTCTCGTGCACCTAGTTCTTCATC
ATCATCAAAATTGGTCACACAAAATAATAAATAGATGATGGCATTTGAGGAGAAAATGTTATCAGTACTTATAAGCTCTT
TTTGTTATGCTGTAGTTATACCGCGAATGCTTAAGGAGGGCTAAGTTCATCGGTAGTCAGGTAAGCATACTTTCGTTTGA
ACTATCTTATTATCTTGAAGTACATAATATTTCTTAGCACACACTCAGCTTGCTCTGTTCTCCTCAAGTATCTTTAACCC
GAGAGTGTTCCAGGAGA---A---ACAGTCTGGTCGCTCCATCATCAGTTCATGTGTCACTTAAGCATCTGTACATAGAT
TTTGAATTACTTCACCTTGTTTTTTTTTCAATGAAAACTGCTCCAAAGAATCAACGTTCTTTGGCAGC---ATAACATGT
ATAAGAGGGCTTATTATTTTCAGGCCCTTTATACTGATGTTCGTAAAATACGTTGCACCTGGAATATGCAAATTGTGTTT
TTTCATTTACAAGATGGAGAACCA--------GATCTACAGTAGAATAAAAGGCCATCACAAATTAGAACTAATAAGTC-
--------------------------------------------------------------------------------
--------------------------------------------CTATTTACCTTTGA-G--------------------
--------------------------------------------------------------------------------
-------------------------------TTATGGCATATTTGTGTAACTTTATGAAGGTGCATGTTTGACTGA---G
TTGTATTTTATGACCCAGCAACATAACACAGGGCTTCTTGTTTCCATGGTGAGGCAACAGTTCAAGAAAAACATGCATGA
AACTGATCCAGAGAAGATACAGAAAATGAAGGATGAGTAAGTTACTGCTCCGTGGGCACCTTCAATTTTTGGCTGACTTA
CCTTTTTATTCTCGTTGGAACATACATCATGAAATTATATCTTGCTATGCAGTGCGGCACGGGGCCTTATCAATCACATA
ATATATGAATCCGAGAAGATGACAGGACGTAAATTCTCAGGTTAAGAAAGTTGAAAGTAGACTTTTGGCAATATGCTGTA
CGAGTTGAACAGCGACTTGATCCTATGGCTGTTGAATTATTTTTCTCCTCCGACACAAGGACCATCTAATGCTTTTCTTT
GTTGTTGACTTAATAAAGCAGTGTTTTTTCATCAGTTGCATTTTACTGTGCTTCTGGATGTAATTGACCCACGCATGCCA
AGCGTTAGCTGTTTTGTTAAGGTGTAAATCTTCAGCAATTTTAAGTGCTCCAATCTGTGTTTAAACGGCTGCGTTGCTTG
AATTTTCTTCTTCTCGTGATGTATTGAGGCAGTTTCAACATGTTCACTGGTTCCATTTCCATGGAGCTGAATCGGTCACA
AGTTTGCAAAACCGGAAATATTCCTTGCAGTCTTTTTTCTCTGTTTTTTTAGACGATTA----------AATCACTTGAA
GTTTCCAAGGCTTGTTGTG--------GATCTCACTGGATTGTCAGCAGTATTAAACAGTCTGCACAACTAAAGAGCTCA
TGGCTATGAAATGCCAGATTAGAACACCAAAGATTGCCGTTGCCTTCAGTTTATTCTCTCGTGAAACTGTTTTTAGGTGA
GCCTGAAGAGTGCACTCTTACCAAGTTCTACTGATACCATCGGTCTTTCTCAGTAAAAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCAAGAGAATCACTCTTACCAAGAGGCTTGAC
TTACTGGAGTAACAGAATGCATCCCA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------ATTATTCATGGTCACATCTGTAGATCCTGGATGATGCATCT
GCCCCTCTGCACCTAACATGCATGGATATGATATCTCAGCTTTCAGCTGAAGCAGCTACCACTCTATGGGTTGTATTTTG
TCACATTGCTCTCTGGAATCCGGAAAAGCGCGACAAAACGGATGGCGTTGCGTC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------AAAGAGAT--GAGAG----GGGTGTAGGAAAGGAACTGAT
GAGGATGATGAGTTCAGTGATCTGGGGCCAGTTCTGGAATTCCCTGCACTGCAGGGTGTGAAACACTACTTACTGTCTGC
AGGTC---------------------------------------------------------------------------
--------------------------------------------------------------
>chr5B_457
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TTGCTTTGGGAAGCTGGTACTTT
CATGCAGTCTCTTACT----GCTTGG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ACCATGGTCCTTGGTGTGATTGTAAGGTTGTATCACATT
TTTGGATATGGTTTTGTTCCCTT-GTTTCTTTTAAGTTGTTGATATATAGCTTTTGTGTGCATACTGGTA--TTTTGTAT
TAATACTCTTTTCTGTGGTAGTATGTTG----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TACTG
GTGTGTGTGCCTTAAACCTTTTTGTAATCAAAAACAT-TGTCTGGCCTGTTGTTCCTTAATTGCTGTAGGCGAATAATAA
ATGTTTGAGATTTACATGTTTAAGTAACCGACTTTCTT---GTTGATTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCATTTCAGAGTAAAGGAAGATGCCTT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---CACTTCAGAAAGCTTTACCTCCAGAACTTGCCGATAACGCGCTTAGAGTAAGGATCCTATCACACCTTTCTAATAGA
CAAATTACCCCCATCATGACCTGTACATGGTGATGGTAATGAGTAGTAAGTTCTGAAATTTCATCTCTGTAGTCGGAGTA
GCTCTATCAGTTAAGTGTACCCTTTTAGCTTCAGCTTTTGCAAATCATGTCTAGTACTCTCGTGCACCTAGTTCTTCATC
ATCATCAAAATTGGTCACACAAAATAATAAATAGATGATGGCATTTGAGGAGAAAATGTTATCGGTACTTATAAGCTCTT
TTTGTTATGCTGTAGTTATACCGCGAATGCTTAAGGAGGGCTAAGTTCATCGGTAGTCAGGTAAGTGTACTTTCGTTTGA
ACCATCTTATTATCTTGAAGTGCATAATATTTCTTAGCACATACTCAGCGTGCTCTGTTCTCCTCAAGTATCTTTAACCC
GAGAGTGTTCCAGGAGA---ACTAACAGTCTGGTCGCTCCATTGTCAGTTCCTGTGTGACTTAAGCATCTTTACATAGAT
TTTGAATTACTTCACCTTGTTTT--TTTTAATGAAAACTGCTCCAAGGAA-CAACGTTCTTTGGTGGCATAATAACATGT
ATAAGAGGGCT------------------------GATGTTCGTAAAATATGTTGCACCTGGAATATGCAAATTGTGTTT
ATTCATTTACAAGATTACAAGATGGAAAACCAGCTCCACAGTAGAATAAAAGGCCATCACAAATTAGAACTAATAAGTAC
TCCCTCCGTCCGAAAATACTTGTCATCAAAATGGATAAAAAGGGATGTATCTAGAACTAATATACATCTAGATACATCAT
CTTTTATTCATTTTGATGACAAGTATTTCTGGACGGAGGGAGTACTATTTACCTTTGATG--------------------
--------------------------------------------------------------------------------
-------------------------------TTATGGCATATTTGTGTAACTTTATGAAGGTGCATGTTTGACTGAGTTG
TTGTATTTTATGACCCAGCAACATAATACAGGGCTTCTTGTTTCCATGGTGAGGCAACAGTTCAAGAAAAACATGCATGA
AACTGATCCAGAGAAGATACAGAAAATGAAGGATGAGTAAGTTACTGCTCCGTGGGCACCTTCAATTTTTGGCTGTCTTA
CCTTTTTATTCTCGTTGGAACATACATTCTAAAATTATATCTTGCTATGCAGTGCGGCACGGGGCCTTATCAATCACATA
ATATATGAATCCGAGAAGATGACGGGACGTAAATTCTCAGGTTAAGAAAGTTGAAAGTAGACTTTTGGCA-TATGCTGTA
CGAGTTGAACAGCGACTTGATCCTATGGCTGTTGAATTATTTTTCTCCTCCGACACAAGGACCATCTAATGCTTTTCTTT
GTTGTTGACTTAATAAAGCAGTGTTTTTTCATCAGTTGCATTTCACTGTGCTTCTGGATGTAATTGACCCACACATGCCA
AGCGTTAGCTGTTTTGTTAAGGTGTAAATCTTCAGCAATTTCAAGTGCTCCAATCTGTGTGAAAACGGATGTGTTGCTTG
AATTTTCTTCTTCTCATGATGTATTGAGGCAGTTTCAACATGTTCACTGGTTCCATTTCCATGGAGCTGAATTGTTCACA
AGTTTGCAAAACTGGAAATATCCGTGGCCGTCTTTTTTCTCTGTTTTTTTAGACGATTTTGAACTTTGCAATCACTTGAA
GCTTCCAAGGCTATTTGTG--------GATCTCACTGGATTGTCTGCAGTATTAAACAGTCTACACAACTAAAGAGCTCA
TGCCTATGAAATGCCAGATTATAACACCGAAGATTGCCGTTGCCTTCAGTTTATTCTCTCATGAAACTGTTTTTAGGTGA
GCCTGAAGAGTGCGCTCTTACCAAGTTCTACTGATACCATCGGTCTTTCTCAGTAAAAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCAAGAGAATCACTCTTACCAAGAAGCTTGAC
TTACTGGGGCAATAGAATGCATCCTA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ATTATTCATGGTCACATCTGTAGATCCTGGATGATGCATCT
GCCCCTCTGCACCTAACATGCATGGATATGATATCTCAGCGTTCAACTGAAGCAGCTACAACTCTATGGGTGGTATTTTG
TCACATTGCTCTCTGGAATCCGGAAAAGCGCGACAAAACGGATGGCGCTGCGTC--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------AAAGAGATGAGAGAG----GGGTGTAGGAAAGGAACTGAT
GAGGAGGATGAGTTCAGGGAGCTGGGGCCAATTCTAGAATTCCCTGCACTGCAGGGTGTGAAACACAACTTACTGTCTGC
AGGTC---------------------------------------------------------------------------
--------------------------------------------------------------
>SNPs
-------------------------------S---S--------S-S---------------------------------
-------------------------------------------S--S---S------------------------S----
-----------S---S----------------S--------S------------S-------------------------
----------------SS---------------------------------------S---------S------------
----S-----------------------------------S---------------------------------------
---------------------S-----------------------------S----------------------------
------S---------SSS-----S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------S-------------SS--------
-S----------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
-----------------S----------------SSSS-------S-------------------S--------------
---------------------------------------SS---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------S---------SS------------------------------------------S--S-
--S---------SSS---------------------------------------------S----------S--------
-----S-S----S-S--------------S---S----------------------------------------------
---S-------------------S-----------------------------------------------------SS-
------S---------------------S-------S------------------S-----------------------S
-----------------SSS------------------------------------------------------------
---------------S-------S---S----S---------------------S-----S-S-----------------
---------------S---------S---------------------------------SS-------------------
--S---------------------------------------------------------------------S-S-----
--------------------------------------------------------------------------------
----------------------------------------------S------S------SSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------SS
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-------------------------------------------------------SSSS---------------------
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>forward_1209
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---------------------------------------------------------------------GGGTTTCGCCT
CTAGCCTAC-----------------------------------------------------------------------
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-CGCAGCGGTAAAAGTAGGGA-----------------------------------------------------------
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----------------------------------------------------------------------GGTTTCGCCT
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-----------------------------------------AAAAATGGCCGGACCCTTCT-------------------
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-----------------------------------------------------------------------GTTTCGCCT
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------------------------------------------AAAATGGCCGGACCCTTCTG------------------
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-CGCAGCGGTAAAAGTAGGGA-----------------------------------------------------------
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----------------TGGGGTCTCACTGGATTGTC--------------------------------------------
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--------------------------------------------------------------
