>input_sequence_56502
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------ATGGCGTCGTCGGAGGGACC---TCGTCGT
CGGCGGCGGGGCAAGAAGAGCGAAGCCAAAAACAAGAAGAAGAAAGAGGCCGGACCGACGACCGTGGAGGACCTCCCCGA
CCACCTCTTCGAGCTCATCCTCCTCCGCCTCGGCCCGTCGCCATGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCGTCGGGAACCCCGGCTTCCTCGCCCGCTTCGGCCCGGTCCACGAGCAGGTCCCGTACGTCGGCGACTACCAC
ACCGTCCAGGGCGGCGAGCCCCTCTTCGTCCCCTCCTCGCCGGTCGTCGTCGACCGCAGCCGCTTCTTCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGAGATCGCGGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACAGTCGCCGTGTCCGCCACTACCCCGACCTTATGGTATGCGAGCCGCTCACCGGGCTCTACCAGGGGATC
CTCTGGCCGGAGGATCTGGACGGAACCGGCCGCCTCGGCGTGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTTGCGGCCGTCGACGATGCCATGGCATGTGTGTTCTCCACGGGCAGGGATGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAATTTCGTAGGGCGCGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCCCTTGACGAGGCCACCGCGGAGTTCTCGCTCGC
CGCATTCCCGGAGACCGTCTGGGGGCCGTCGCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCACGCTGCGCG
TCATCCGCCTCATAGGCAACGACCTCAAGGTCTTCGCACGGCGGCATCCGGGCAGT---GACGAAGATGAGTGGCTGCTG
GAGATGCAGCTGGAGTTGCCGGAGGCCACCCTTAGGCTGCCGGGGCGCGAGGAGCACTTCTTCCGGCAACAAGCCATGGT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAGGCGTGGTTATTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCGAGCACGAGAGAAACAAGTACGCCGGAGAAGCGTACCCGTGCAAGTTGCCGTGGCCGCCGGCCTTGACT
GATCATGGCAGGGAGAGGAGGTGA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr1A_1_TraesCS1A01G257700
GACTTACACAAAATAGTTTTTTTAACAGTACACTAATGACGTATCGTATTTTTATAGAAGATTGAAGATTAATTACAAGA
AGCATGCCCCGGATACGAACATTCAGGCAGACGCGAGGCCATCGCCTTACACCAACTCCAAACTAGGAACGTTAAGCTAA
CTCCTCACAAATTGTTGTAAACCACCAAAACCAACACCCGTTTTCCTCCACTCAGCAACCTCATCCAGCACGTGAAGTGA
TAGCGCAGTTGGTGACATTTGTTGCGTCACTCCGTTAAACACTCTAACATTACACTCCTTCCATAAAGATCAAGCCATGG
------CCAATGTGTCGAAGCCTCTCCTATCTGTGCCCATGAAGTTTCTCCTCTCCCTGAAGACCTGAACCACCGGTCAG
CGGGCGTGTC--------------------CATTGATCCGTAGGGGGTCCCACACCTTATGACACACTTTC-GAGCATAT
ACGCACTTGGACGGAATATGTTTGACGTTGTCCTCGTCTTGCAGACTCGTAAAACACGCGGATGACTGGTCCTGCAAGCC
ATGCCTCGCCCGTCGGTCCGACATCCAAAGCCTGTGCTTCACTGTAAGACACACAAATACTGCACAAAATAGTAATTCAT
GCAACTTACACATAGCAAAA--------------------------ATG-AAAAAAAAATTAGAGGACTCTCCTTTTCCT
AAGTCCCTGGCCTCAACATCTGGCCGTTTGGCTTGTTGACAT------------------------------------GG
ACGTGCAAGGACTGCGGGCGCCTTAAATGGTGCATTGCGCCGCTCGAATCTTTCAGCGGACACGTTTACGCGCGTCGATC
GCGCTGGAGTAGTTAACAACACGCCACACGCCATGGCGCGAGACTTGGAGGGCGCGGCACTCCTCCTCGCCGCCTCGGGT
CAACGCTCGACTGCCGGCGCGCGCTGTGGGCTGTGGCGATCTTGTTTATCTAGAGCAGAATTTCGCGACAGGCGGCCGTC
ACTCGTCAGCGCGGTGCGTGAGAGAGACGCCACTCCCCTTCCCTTCGCATATGGCGTCGTCGGAGGGACC---TCGTCGT
CGGCGGCGGGGCAAGAAGAGCGAAGCCAAAAACAAGAAGAAGAAAGAGGCCGGACCGACGACCGTGGAGGACCTCCCCGA
CCACCTCTTCGAGCTCATCCTCCTCCGCCTCGGCCCGTCGCCATGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCGTCGGGAACCCCGGCTTCCTCGCCCGCTTCGGCCCGGTCCACGAGCAGGTCCCGTACGTCGGCGACTACCAC
ACCGTCCAGGGCGGCGAGCCCCTCTTCGTCCCCTCCTCGCCGGTCGTCGTCGACCGCAGCCGCTTCTTCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGAGATCGCGGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACAGTCGCCGTGTCCGCCACTACCCCGACCTTATGGTATGCGAGCCGCTCACCGGGCTCTACCAGGGGATC
CTCTGGCCGGAGGATCTGGACGGAACCGGCCGCCTCGGCGTGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTTGCGGCCGTCGACGATGCCATGGCATGTGTGTTCTCCACGGGCAGGGATGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAATTTCGTAGGGCGCGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCCCTTGACGAGGCCACCGCGGAGTTCTCGCTCGC
CGCATTCCCGGAGACCGTCTGGGGGCCGTCGCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCACGCTGCGCG
TCATCCGCCTCATAGGCAACGACCTCAAGGTCTTCGCACGGCGGCATCCGGGCAGT---GACGAAGATGAGTGGCTGCTG
GAGATGCAGCTGGAGTTGCCGGAGGCCACCCTTAGGCTGCCGGGGCGCGAGGAGCACTTCTTCCGGCAACAAGCCATGGT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAGGCGTGGTTATTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCGAGCACGAGAGAAACAAGTACGCCGGAGAAGCGTACCCGTGCAAGTTGCCGTGGCCGCCGGCCTTGACT
GATCATGGCAGGGAGAGGAGGTGATGATGATGATGCCTGATTGTCATGGCTGCCGACTTTGTCATCATAGCAGACTAGCA
GAGAGGAGGTGATGACGTCCCTGATCGTGTATCAAAATTTCAAAAGGTTATCCGTTTCGTCGTATCTGGAACAGATTTGC
ACTATTTGTATTAAAAAAAATCCGTCCCGTG-TTTTTGCTTCACTCTGTTCTT---------------------------
--------------------------------------------------------------------------------
---------------------TGGGCCAGCCGATTTGTTATTGGGCTGAAACGCATTTCGTGTTGCCTG-----------
--------------------------TTTGTATGCATTTTTTGCTTCTCTTTTTTTAAGTCTGTTTATAGGGGTATATTC
AGGATGTTGGATGAGTGTAAAATGTATACATGCAATTACTATATAACATGTGTATAAATTGTAGTATAGTGCGAAAATTA
CACTACTATATGTTTATTCTTTGTACATATTAAAAAGTCCCAAGTTGTGCGGAAGTTTTTTAAAGTGTTTGTTTCATTCT
TCTATCTTCTTAAAGGGTAATACTAATGACGCTAATTCATTCTACCTCTTCATTTTCTTAAGTGTTGGTATCATTTTCTT
TCTTCCATAAGGCCATAAGGGTAATATCAATGCCACTAATTTATTTCTTTTAGTTCACTTATTTTTTTCAAAGTGCCACT
ATTATATGTATTCTTGCATATTATAAAAACATAATTTATGCGTAAATCATGTGCAAAATTTTTCATTATTTGCTTAATAT
TTTTTTTTTGCATTTTCTTCCTTCTTAAAGGGTAATACCAAAGCCACTAATTCATTCTTCCTTAGAAAATTTCATTACAA
TACTTTGATTTTATTTTAGTATTTTTTTCTATCTTCTTAAAGATCAAAATATAATTATTTTTTCCTTTCAAACTTCATAA
TTTTGAATTTTTAAGTTTTTGCTTCATTGTAAATATCAGACGGAAACCAATTCGATGGAAACCAGTGAAAAACCAGAAGA
AAAGATATTTTGAAGTTTAAATTTTTTTTGAAAAAAATACAGGATGTTAAGAGGATGATGTTTTATTGCC
>chr1D_1
GACTTAGACGAAATAGTTTTTTTAGTGTACGCC-AATGACATACCATGTTTTTATAAAAGTTAGAAGGTTAATTACAAGA
AGTCTTCCATGAATGTGAACATTCGGCCAGACACGAGGCCATCGCCTTACACCAACTCCAAACTTGGAACCCTAAGCTAA
CTCCTCTCGAATTGATGTAAACCACCAACACC---------------------------------CAACACGTGAAGCAA
TAGTGCACTCAGTGACATTTGTTGCGTCACTCTGTTAAACACCCAAACACTACGCTGCTTTCATATAGACCAAGCCACGG
CCGTGACCAATGTGTCGAAGCCTCTCCTGTCTGCGCCCCTGAAGTTCCTCCTCTC--------CCCCATCCACCAGTCAA
TGGTCGTGTCCAACAGTGACGGCCCATGCACATTGATCCGTAGGTGGTCCCACACCTTATGCCACACTTCCTGAGCATAT
ACCCACCTCGACAGAATATGTTTGATGTT----TCGTCTTGCAGACCCGTAAAACACACCGATGGCTGGTCCTGCAAGCC
ATGCCTCGCTCGTCGGTCCGATGTCCAAAGCCTGTGCTGCACTGCAAACCACGCAAATACTGTATGAAATAGTAATTCAT
GCAACTTACACATAGCAAAAGAAAAAAAAACTTACACATAGCAAAAATG-AAAAAAAAAATAGAGGACTATCCTTTTCCT
-AGTCCCTGGCCTCAACATCTGGCCG-TTGGCTTGTTGACAT------------------------------------GG
ACGTGCAAGGACTGCGGGTGCCTTAAATGGTGCATCGCGCTGCTCGAATCTTTCAGCGGACACGTTTACGCGCGTCGATC
GCGCTGGAGTAGTTTACAAGACGCCACACGCCATGGCGCGCGACTTGGAGGGCGCGGCA---CTCCTCGCCGCCTCGGGT
CAACGCTCGACTGCCGGCGCT-------GGCTGTGGCGATCTTGTTTATCTAGAGCAGAATTTCGCTGCAGGCGGTCGTC
ACTCGTCAGCGCGGTGCGTGAGAGA--CGCCACTCCCCTTCCCTTCGCAAATGGCGTCACCGGAGGGACGTCGTCGTTGT
CGTCGGCGGGGCAAGAAGAGCAAGGCCAAA---AAGAAGAAGAGAGAGGCCGGGCCGACGACCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCATGCCTCGTCCGCGCCGCGGCCGCGTGCAGGCGGTGGT
GCCGCGTCGTCGGGAATCCCAGCTTCTTCGCCCGCTTCGGCCCGGTCCACGCGCAGGCCCCGCACGTCGGCGACTACCAC
GCCGTCCACGGGGGACAACCCCTCTTCGTCCCCTCCTCGCCGGCCGTCGTCGACCGCAGCCGCTTCTCCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGACATCGCGGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACAGTCGCCGTGTCCGCCACTACCCCGATCTTATGGTATGCGAGCCGCTCACCGGACTCTACCAGGGGATC
CTCTGGCCGGAGGATCTGAACGGAATCGGCCGCCTTGGCGTGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTTGCGGCCGTCGACGACACCGTGGCATGTGTGTTCTCCACGGGCAGCGAGGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAACTTCGTAGGGCGCGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCTCTTGACGAGACCACGGCGGAGTTCTCGATCGC
CGCACTCCCGGAGACCGTCTGGGGGCCGTCCCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCGTGCTGCACG
TCATACGCCTCATAGGCAACGAGCTCAAGGTCTTCGCACAGTGGCATCCGGGCAGT---GACGAGGATGAGTGGTTGCTG
GAGATGCAGCTGATGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCAAGGAGCACTTTTTCCGGCAACAAGCCATGAT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAATCGTGGTTGTTCTCTGTTGAGCTTGATACAATGC
GAATAGAGCGCAAACACGAGAGAAACAGGTACGCCGGAGAAGCGTACCCGTGCAAGTTGCCATGGCCGCCGGCCTTGGTT
GACCATGGCAGGGAGAGGAGGTGA---CGATGATGCCTGATTGTCATGGCTGCCGACTTTGTCTCATCA------TAGGA
GAGAGGAGGTGATGACGTCCCTCATCGTGCATCAAAATTTCAAAAGGTTATCCGTTTTGGCGTATCTGAAAAAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr1B_515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGGCTGGTCCTGCAGGGC
GAGCCTCGGCCGTCGGTCCGACGTCCATAGCCTGTGTTGCACTGCAAGCCACACAAATACTGCACGAAATAGTAATTCAT
GCAACTTGTGCATAGCAAAA--------------------------ATGGAAACGAAAAAAAGAGGACTCTGCTTTT---
---TCCCTGGCCTCAACATCTATCCG-TTGGCTTGTTGATGACATGGACGTGCAAGGAGCCAAGGACTGCGGGTGCAAGG
ACGTGCAAGGACTGCGGGT----------------------GCTCGAATCTTTCAGCTGACACGTTTACGCGCGTCGATC
GCGCTGGAGTAGTTTACAACACGCCACACGCCATGGCGCGCGACTTGGAGGCCGCGGCACTCCTCGCC------------
-----------------------------GCTGTGGCGATCTTGTTTATCTAGAGCAGAATTTCGCGGCAGGCGGTCGTC
ACTCGTCAGCGCAGTGCGAGAGAGA--CGCCACTCCCCTTCCCTTCGCTAATGGCGTCATCGGAGGGACGTCG------T
CGTCGGCGGGGCAAAAAGAGCAAGGCCAAA---AAGAAGAAGAAAGAGGCCGGACCGACGATCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCATGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCGTCGGGAACCCCGGCTTCTTCGCCCGCTTCGGCCCGGTCCACGCGCAGGCGCCGTACGTCGGCGACTACCAC
ACCGTGCAGGGGGGACAACCCCTCTTCGTCCCCTCCTCGCCGGTCGTCGTCGACCGCAGCCGCTTCTCCCTCGAGTTCCT
CCCGGAGAGCGGATCGTGGGAGATCGCCGACAGCCGCGGCAGCCTCCTCCTCCTCACCAAGAAGAGGGCGCCGCAGAGCT
GGCGCGACTACTCTCGCTGTGTTCGCCACTACCCCGACCTTATGGTATGCGAGCCGCTCGCCGGACTCTACCAGAGAATC
CTCTGGCCGGAGGATCTGGACGGAATTGGCCGCCTTGGCGTGTTCCTGCTTAACGGCGACGACGCGGGCCGCCGCGTCAG
CACGTCCAACTTCAGGGTCCTAGCGGCCGTCGACGAAACCGTGGCATGTGTGTTCTCCACGGGCAGCGAGGGCGGCTGGC
GCATTATTTACAGCGAGATCACCAGCCACGTCGAGCTCCCAAA---GCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAC
GGCACTCTGTACTGGGGAATTGACGGATGCGCCACCGCCGTTCTTGCTCTTGACGAGACCACGGCGGAGTTCTCGATCGC
CGCATTCCCGGAGAACGTCTGGGGGCCGTCCCACATACGGACCTCGCGGATCGTCGGCGGCGAGGACGGCACGCTGCGCG
TCATCCGCCTCATAGGCAACGACCTCAAGGTCTTCGCCAAGCGGCATGCGGGCAGT---GACGAGGATGAGTGGTTGCTG
GAGATGCACCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCGAGGAGCACTTTTTCCGGCAACAAACCATGAT
TGTTGCGGCGAATACCAGATACGTCCTGCTGACACCGAGCGAGAAATCGTGGTTGTTCTCTGTTGAGCTTGATACAATGC
GAGTAGAGAGCAAACACGAGAGAAACAAGTACGCCGGAGAGGCGTACCCGTGCAAGTTGCCATGGCCGCCAGCCTTGGCT
GATCATGGCAGGGAAAGGAGGTGA---TGATGATGCCTGATTGTCATGGCTGCCGACTTTGTCTCATCA------TAGCA
GAGAGGAGGTGATAACGTCCCTGATCGTCTATCAAACTTTCAAAAGGTTATCCGTTTCGGCGTATCTGGAACAGATTTGT
ACTATTTGTAGAAAAAAAAATCCGTACCGTGTTTTTTGCTTCACTCTGTTCTTGCGTGTGCCTCTCTTGGACTCCTTCCT
CATGCTCCCCCCGCCATTATATTGAACAGCGGCTAATTAGGGATTTGGAACAGAAAATGTTTATAAATAATTCGTGCTTA
TTTTTTGACTGGACACTGTTTTGGGCCAGTCGATTTCTTATTGGGCTGAAACCCATTTCGTATTGCCTGTTTATAGGCCG
TGCTGCCTCTTTTTTCTGTTTGTAACTTTGTATGCATTTTTTGCTTCTCTTTTTTAGTCG--GTTTATAGGGGTATATTC
AGGATGTTGAATGAGTGTAAAATGTATACGTGCAATTACTATATAACATGTGTATAAATTGTATTAGAGTGGAAAAATTA
TACTACTATATGTTTATTCTCTATAC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr1A_1027
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
CGTCGGCGGGGCAA---GAACAGGCCCAAA---AAGAAGAAGAAAATGGCCGGACCAACCACCGTGCAGGACCTCCCTGA
CCATCTCTTCGAGCTCGTCCTCGCCCGCCTCGGCCCGTCCCCGTGCCTCGTCCGCGCCGCGGCCGCCTGCAAGCGGTGGT
GCCGCGTCATCGCCAACCCCGGCTTCCTCGCCCGCTTCGGCC---------CGCAGGCGCCGCACGTCGGCGACTACCAC
ACCGACCACGGCGGTCGACCCCTCTTCGTCCCGTCCTCGCCGGTCGTCGTCGACTGCAGCCGCTTCTCCCTCGACTTCCT
CCCGGACAGCGGATCGTGGGACATCGCGGACAGCCGCGGCAGCCTTCTCCTCCTAT------------------------
------------------------GCGACGGCTACGATCTAATCGTTTGCGAGCCGCTCACCGGACTCTACCAGGGGATC
CTCTGGCCTGGCGTGTTCCGGCGT------CGCCTGGGCGTGTTCCTGCTCGACGGCGACGACGCGGACCGCCGCGTCAG
CATGTCCAACTTCAGGGTCCTCGCTGCCTTCGACGAAACCACTGCGTGCATCTTCTCCACCGGCGGGGACGGCGGTTGGC
GCCTCGTGTCCAGCGCTATCGCCGGCGACATCGAGCTCCCGTCAACGCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAT
GGCACTGTATATTGGGGAATCGAAGGAAGTGACACCGATGTACTTGTTCTTGCTGAGTCCACGGCGGAGTTCTCCATCGC
CGCATTCCCGGAGACCGTGTGGTGGCCATCCCACAGAGGGATCTCTCGGGTTGTGGGCGGCGACGACGGCGTGCTGCGCG
TTATACGCCTGATAAACAACGAGCTCAAGGTCTTTGCACGCCGGCATCCAGACAGT---GATGGCGATGAGTGGTTGCTG
GAGATGCACCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCAAAGAGAGCTTTTTCCAGCAAGAAGCCATGAT
TGTCTCCGCGAATGCTGGATACGTCCTGCTGACACCGAGCGAGGAGACGTGGCTGTTCTCCGTTGAGCTGGACACGATGC
GAGTTGAGCGCGAGCACGAGAGAAACAAGTACGCCGGAGCAGCTCACCCGTACAAGCTGCCGTGGCCGCCGGCTTTGGCT
GATCATAGCGGGGAGAGCAGGCGA---TGA--------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chr1D_1027
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
CGTCGGCGGGGCAA---GAACAGGCCCAAA---AAGAAGAAGAAAACGGCCGGACCAACCACCGTGCAGGACCTCCCCGA
CCATCTCTTCGAGCTCATCCTCGTCCGCCTCGGCCCGTCCCCGTGCCTCGTCCGCGCCGCGGCCGCGTGCAAGCGGTGGT
GCCGCGTCGTCGCGAACCCCGGCTTCCTCGCCCGCTTCGGCC---------CGCGGGCGCCGCACGTCGGCGACTACCAC
ACCGACCAAGGCGGCCAACCTCTCTTCGTCCCGTCCTCGCCGGTCGCCGTCGACGGCAGGCGCTTCTCCCTCGACTTCCT
CCCGGACAGCGGGTCATGGGACATCGCGGACAGCCGCGGCAGCCTTCTCCTCCTAT------------------------
------------------------GCGACGGCCACGATCTCATCGTCTGCGAGCCGCTCACCGGACTCTACCAGGGGATC
ATCTGGCTTGGCGTGTTCCGGCGT------CGCCTCGGTGCGTTCCTGCTTGACGGCGACGACGCGGACCGCCGCGTCAG
CATGTCCAACTTCAGGGTCCTCGCTGCCTTCGACAGAACCACTGCCTGCATCTTCTCCACCGGCAGCGACGGCGGGTGGC
GCCTCGTGTCCAGCGCGATCACCGGCGACATCGAGCTCCCATCAACGCTCGGCCCCGAAAATTTCGTAGGGCGTGCAAAT
GGCACTATATATTGGGGAATCGAAGGAAGTGACACCGATGTACTTGTTCTTGATGAGTCCACGGCGGAGTTCTCAACCGC
CGCATTGCCGGAGGCCTTATGGTGGCCATCCCACAAGGGGATCTCTCGGGTTGTGGGCGGCGAGGACGGCGTGCTGCGCG
TCATCCGCCTGATAAACAACGAGCTTAAGGTGTTTGCACGGCGGCGCCCAGACAGCGACGACGACGATGAGTGGTCGCTA
GAGATGCAGCTGAGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCGAAGAGAGCTTTTTCCAGCAAGAAGCCATGAT
TGTCTCCGCGAATACTCGATACGTCCTGCTGACACCGAGCGAGGAGACGTGGCTGTTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCAATCACGAGAGGAACAAGTACGCCGGAGCAGCTCACCCGTACAAGTTGCCGTGGCCGCCGGCTTTGGCT
GATCCTAGCAGGGAGAGGGGG-----------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>chrUn_1462
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------CGATCTTATCGTCTGCGAGCCGCTCACCGGACTCTACCAGGGGATC
CTCTGGCCTGGCGTGTTCCGTCGT------CGCCTTGGCGTGTTCCTGCTCGACGGCGGCGACGCGGACCGCCGTGTCAG
CATGTCCAACTTCAGGGTCCTCGCTGCCTTTGACAAATCCATTGCCTGCATCTTCTCCACCGGCAGCGACGGCGGTTGGC
GCCTCGTGTCCAGCGCGATCACCGGCGACATCGAGCTCCCGTCAACGCTCCGCCCCGAAAATTTCGTCGGGCGTGCAAAT
GGCACAATGTATTGGGGAATCGAAGGAAGTGACACCGCCGTACTTGCTCTCGATGAGTCCACGGCGGAGTTCTCCATCGC
CGCATTCCCGGAGGCCGTCTGGTGGCCATCCCACAAAGGGGTCTCTCGGGTTGTGGGCGGCGAGGACGGCGTGCTGCAGG
TCATCCGCCTGATAAACAACGAGCTCAAGGTCTTTGCACGGCGGCATGCCGACAGTGACGACGACGATGAGTGGTTGCTG
GAGATGCAGCTGGGGTTGCCGGAGGCCACCCTTGGGCTGCCGGGGCGCAAAGAGAGCTTCTTCCAGCAAGAAGCCATGAT
TGTCTCCGCGAATGCTAGATACGTCCTGCTGACACCGAGCGAGGAGACGTGGCTGTTCTCTGTTGAGCTGGACACGATGC
GAGTGGAGCGCAAGCACGAGAGAAACAAGTACGCCGGAGCAGCTCACCCGTACAAGTTGCCGTGGCCGCCGGCTTTGGCT
GATCATAGCAGGGAGAGGAGGCGA---TGA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
------S--S--------------SSSSSSSS-S------S--S-S-S--------S---S-S----S------------
--SS-S--SS-S--SS--------S-S-----S-------------------------------S-----SS--------
------S-S-----S-------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---------SS-
---S---S-SS---------------------S---------S-S----S---S--S---S----S---S-------S--
----------------------------S----S----S-------S--------SSSSSSSS--SS-S-----S----S
S--S----------------------------------------S----------------S-------S----------
--S---S-S---S------------S---SSSS-------------S----------S-S----S---------------
----------------------S---------------S-----S---S----------------S--------------
-----------------------------------------------------------S--------------------
S-------------------------S-----------------------------------------------------
------------------S----------------S----S---------------------------------------
--------------S-------------------------S---------------------------------------
--------------------SSSSSSSS---------------------------------------S-------S----
-------------------------SS----------------------S--------S----------S-------S--
--S------------------S-S------SSS---------------------------------S-------------
---S------------------S----------------S----------------------------------------
---------------------------------------------------S-----S----------------------
---------------S-S-------------------------------------------------S------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------S------------------------------------------------------
------------------------------------SS-------------------------------S----------
--------------------------------------------------------------------------------
-----------------------------------------------S---------S----S------------S----
------------------------------S-------------------------------------------------
----------------------------------------------------------------S---------S-----
-------------S-------------------S--------------------------------------------S-
----------------------------------------------S-------S-------------------------
-----------------------------------------------------------------------------S--
------------------------SSS------------------------------------SSSSS-SSSSSS-----
-----------------------------------------------------------S-------------------S
----------SS-------------S------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S------S---------------S--------S------------------
-------------------------------------------------------SSSSSSS------------------
---------S-------------------S---------------------------------S--S----SS-------
S-------------------S-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_238
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CCTCATCCAGCACGTGAAGT--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_1718
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GCCATGGCATGTGTGTTCTC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_895
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CGATC
GCGCTGGAGTAGTTA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_2914
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------AAAGTCCCAAGTTGTGCGGA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
