>input_sequence_56496
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------------------------------------------------------------ATGGGGAACTGCCAGGCGGC
GGAGGTGGCGGCGGCGGTGGTGCAGCACCCGGGCGGGCGGGTGGAGCGGCTCTACTGGTCCACGCCCGCGGCGGAGGTGA
TGCGCGCCAACCCGGGCCACTACGTCGCGCTCGTCACGCTCCGCGTCGCCGAGGAGCGCCAGGACGCCGACGGCGGCGGC
GCGCGCCGCACCGTGCGCCTCACCCGCGTCAAGCTCCTCAAGCCCAAGGAGACGCTGCTCCTCGGCCACGCCTACCGCCT
CATCACCGCCAACGGTAAGCTTCGAGTCTCCGGTTCTCGTCCTCTGCCTCTTCTCCTGCAAGCTGTGCCCACTGCTAACA
TGGCATGGAAAAATGGTGCGTGCAGAGGTGACCAAGGCGGTGCAGGCGAGGAAGGAGGAGAAGCTGAGGAAGGCGCGGCA
GCAGCTGCAGCAGCTGGAGTTGTCGACGCGGCAGAGCAAGCTGCGGCCGGCGGCGGACGGTGACGACGTCGACGACGACG
ACGACGAGGCCAGCTTGGATGAGAGTCTCGATCAGGTGGTTACATGGACTT-AGCTCTATTCAATCCAACTACTTTTCTC
TCTCTCC-------------------------------------------------------------------------
-CCCTCGATGCCGCCATGCACGTTCTCTGCATGATTGATGCGCCTTTAATTGCCTTCTCTGCAAGGGTTGCTAGTTAGTT
GTTCCTCGCGATTCTCATG---TCTTCCTCAGTTCGTCCACAT-CAACACTGTAGGTCATCAGCTTACC-GAGAAGATGA
ATTTTCTCTGGGTAATTGCCATTAGATTTTTCGCGGCTGCAAAATCTGCAAAGTTTTCACAGAAATCTGGTTAACCTTTA
GCTCAAAGGAGAGAATCAGTTTGGAGTACCTGACACTGACAATTCTCAATCCCCAATTGACACGCATAAAACAAGATTGT
AGGTGTGGTCCTGTGGATCCAACTGATTGATGCCATCGTACCGTCCACAAGGGAATTTAATGCTTAAAATAGAGGGATGC
AGAATGATAAAAGAATCATGAATTCATGATGATAAATAAAATACTGAAGAGTCGCGGCTAGTGGCAGGAGCAAAGAATCG
TCTGCGAGATCCCTTCTTCTGCTCCCGTTCTGAACCGCGGCAACATGCAAATGTTCCACCTTCTGACTACTCTACACCTG
AT--TGCAGTTGGCGCGGCAGGACGGAGGAGACGGCCACCGGAGCTCCGGCGCCCGGCACCGGCAATGGCGGCCCTCGCT
GCACAGCATCGACGAGGCCGCGAGCTGA----------------------------------------------------
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>chr6A_1_TraesCS6A01G309500
ACAGGTGAACGGCAACAAAATTCGCACTGCCGGAGCGCAACATTTTGCTTCAAGTTTAGTGCACGG---CCAGCACAAAT
TGCACGTACGAGTGCCAAGCAATTTAGCGAGGTGCGTGCGTAGGCCCGGCGTCGAGATCAGCTCGGCGAAACCAGCAACT
TTTTGCTTGATCGAAAAAGAATCTTTTGCTTGAT-GAGTGCATAGAATTTCAATTAATTCGGGGAGACAGGTAGATAGAT
ATTCCTTCGGTTTTAGGGGTAGTGGATAGATAGTACTTCCTCCGATTCATATTAATTGTCGTAGTTTTAGTAAGTACAAC
TAGTAGATAGATAGAGCGAATCAAGTTGTGGTTGGATGGTTAGAGAGACTGTGGTATCCCAGCCCATTAAGGTTCAAATC
CTGGTGCTCGCATTTTAAGATGATATGTTGGCTCGGTGTTTTGAAGGAGCTCATAGGGATAGAGTGTGCGCATGTGCATT
CATAGAGGTGAGTGTATGCGCGTGTATATGAGCGCTTGTGTTTGTACTGATGTTAAAAAAAGTAGCTAGATAGATAAAAA
CAAAAACTGGTTAATTCGACCGATCT-CCA---CCGTACACGACGGCCCACGAAAAGCAATCGTTTTGTAGATGCCGCCG
GTCTCCGTCTCTCGCCGT---TTGCTACGCCGGCCGCAGACTTACGTCTCCGACGAGCGGTGCACCCAAAAGTGAAATGC
AGTACCTGACAGCGTCCGTTCACGTGGTGCTCGCGACGGTTGAAAA----CGAACCGGTCACCGGGACGGGATATGTACC
ACCACCACGGCACCACCTCGGCAACCGAGCCGTTGCTCTCTCTCCTCTTTATAAAGCACTGGTGCACCACACGCTCGCCA
CTTGCTCGCGCTCTCCCTCGCCCACGTTTCCC-GGCCGGCACAGGGTAG--GCTAAGCC--AGGACCAGCGCCCAGCTCT
GGTCACGGGGAGCGTGTGTGTGTGTGTGTGTGTGGCTGCGGCGGGCCGGAGCGGGCGAGGATGGGGAACTGCCAGGCGGC
GGAGGTGGCGGCGGCGGTGGTGCAGCACCCGGGCGGGCGGGTGGAGCGGCTCTACTGGTCCACGCCCGCGGCGGAGGTGA
TGCGCGCCAACCCGGGCCACTACGTCGCGCTCGTCACGCTCCGCGTCGCCGAGGAGCGCCAGGACGCCGACGGCGGCGGC
GCGCGCCGCACCGTGCGCCTCACCCGCGTCAAGCTCCTCAAGCCCAAGGAGACGCTGCTCCTCGGCCACGCCTACCGCCT
CATCACCGCCAACGGTAAGCTTCGAGTCTCCGGTTCTCGTCCTCTGCCTCTTCTCCTGCAAGCTGTGCCCACTGCTAACA
TGGCATGGAAAAATGGTGCGTGCAGAGGTGACCAAGGCGGTGCAGGCGAGGAAGGAGGAGAAGCTGAGGAAGGCGCGGCA
GCAGCTGCAGCAGCTGGAGTTGTCGACGCGGCAGAGCAAGCTGCGGCCGGCGGCGGACGGTGACGACGTCGACGACGACG
ACGACGAGGCCAGCTTGGATGAGAGTCTCGATCAGGTGGTTACATGGACTT-AGCTCTATTCAATCCAACTACTTTTCTC
TCTCTCC-------------------------------------------------------------------------
-CCCTCGATGCCGCCATGCACGTTCTCTGCATGATTGATGCGCCTTTAATTGCCTTCTCTGCAAGGGTTGCTAGTTAGTT
GTTCCTCGCGATTCTCATG---TCTTCCTCAGTTCGTCCACAT-CAACACTGTAGGTCATCAGCTTACC-GAGAAGATGA
ATTTTCTCTGGGTAATTGCCATTAGATTTTTCGCGGCTGCAAAATCTGCAAAGTTTTCACAGAAATCTGGTTAACCTTTA
GCTCAAAGGAGAGAATCAGTTTGGAGTACCTGACACTGACAATTCTCAATCCCCAATTGACACGCATAAAACAAGATTGT
AGGTGTGGTCCTGTGGATCCAACTGATTGATGCCATCGTACCGTCCACAAGGGAATTTAATGCTTAAAATAGAGGGATGC
AGAATGATAAAAGAATCATGAATTCATGATGATAAATAAAATACTGAAGAGTCGCGGCTAGTGGCAGGAGCAAAGAATCG
TCTGCGAGATCCCTTCTTCTGCTCCCGTTCTGAACCGCGGCAACATGCAAATGTTCCACCTTCTGACTACTCTACACCTG
AT--TGCAGTTGGCGCGGCAGGACGGAGGAGACGGCCACCGGAGCTCCGGCGCCCGGCACCGGCAATGGCGGCCCTCGCT
GCACAGCATCGACGAGGCCGCGAGCTGATGCCCGGCCATGCATAGCCCTCGGTGGATCTTCTGTATTTTCGGCGTCCACC
GGGCCTCGACAGATTAATCTAGCTCGCGTCACATGGGTTGCTGCCACATCTGTGTTGGAT--------------------
--CGCTTCTGAAGCGGCTCCGTCGATCGGAGCGTGTCCG-------TGTACATTTTCAGGGTTTCTCGTCAGGGTCTGTT
AGTGAGAGTGAGACTGCCTTTTTTTCTTTCTTTCTCTTGATACGTTTGCACCTGATTAAGATGCATGAAAGAAGTTCACA
ACACGAGTAGCTAATACTACATCCATACAAGAGATGATGCCATTGCCATGTACTA------ATGCACCTGTGCATCGATC
TCGTCCATGCTCATGGCCTCTCATGGGTGATGGCGTTT-CTCTGTGCTGTGTTCTTGCAATTCTTGGCGCCGAGTTCTCA
ATCATAAGCACGGTGCCGGCTGCGGGCGCACCTGCAAGCAGCGGCCGCAGGTGGTGGGATGGAATCAGTCGTCTGATGAG
AGCCTTTTGGGCTGGAAGCTCGTTGAGCAGATTCGCGTCGGCG-------------------------CTGCGAAGAGAG
TTTAAAACTTTGACGCCCACGATACCTAAGCTCTGTGTGCCTGTTTGGCGCTTTGGCGTCTGGCGACGGTGGTTGGCCAC
ATGCTCTCTGTGGGCTGCCC------------------------------TGAACAACACAGGAGCTGACATTTCCACTG
TAGATTAATGGCCAAGCTGTTTGTTAGTTACTCCTACTA-------ACCACAATTGGGGACAGTTGAATACTGGCAGCAT
CAGCTGCTGTGCTTACCACTAGTTAATGTGGCCGGCACCAAATGGATCCGCCCAGCCTCCCATGGCGGGGTGAGTTCCTC
CGTAAGTGGCAGCTTTTGGCCACTCATGGACGCATCGACCGTATGTGGCAGCTTGGCGA--------TG---GCCGCTTT
GTCCATCAAAAGGCCAATTATGCATTGCAAGATGATCATATGCTTTGGGGATCGACTGCAGGCTGGGCCCGAGCCCGCGG
TCGGAAATGAAATCTTC
>chr6D_2
-CAGGTGAATAGCAACAAAATTCGCGCTGCCGGAGCGCAACATTTTGCTTCAAGTTTAGTGCACGG---CCAAGACAAAT
TGCACGTACGAATGCCAAACAATTCAGCTAGGTGCGTGCGTAGGCCCGGCGTCAAGATCAGCTCGGCGGAACCAGCAACT
TTTAA--------------------TTGCTTGATCGAGTGCATAGAA-TTCAATTAAATCGGGGAGATAGGTATATA---
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----------------------------------------------------------------------TAGATGAAAT
TAAAAACTGGTTGATTCGACCGATCT-CGTCATCCGTACACGACGGCCCACGAAAAGCGATCGTTTTATAGGCGCGGCCG
GTCTCCGTCTCCCGCCGT---TTGCTACGCCGGCCGCAGACGGACGTCTCCGACGAGCGGTGCACCCAAAAACGCAGTAC
T---CCTGACAGCGTCCGTTCACGTGGTGCTCGCGACGGTCGAAAA----CGAACCGGTCACCGGGACGGGATATGTACC
ACCACCACGGCACCACCTCGGCAACCGAGCCGTTGCTCTCTCTCCTCTTTATAAAGCACTGGTGCACCACACGCTCGCCA
CTTGCTCGCGCTCTCCCTCGCCCACGTTTCCCCGGCCGGCACAGGCTAAAAGCTAAGCC--AGGACCAGCGCCCAGCTCT
GGTCACGGGGAGCGTGTGTGCCG----GTGTGCGGCTGCGGCGGGCCGGAGTGAGCGAGGATGGGGAACTGCCAGGCGGC
GGAGGTGGCGGCGGCGGTGGTGCAGCACCCGGGCGGGCGGGTGGAGCGGCTCTACTGGTCCACCCCCGCTGCGGAGGTGA
TGCGCGCCAACCCGGGCCACTACGTCGCGCTCGTCACGCTCCGGGTCGCCGAGGAGCGCCAGGACGCCGACGGCGGCGGC
GCGCGCCGCACCGTGCGCCTCACCCGCGTCAAGCTCCTCAAGCCCAAGGAGACGCTGCTCCTCGGCCACGTCTACCGCCT
CATCACCGCCAACGGTAAGCTTCGAGTCTCCGATTCTCGTCCTCTGCCTCTTCTCCTCCATGCTGTGCCCACTGCTAACA
TGGCATGGAAAAATGGTGCGTGCAGAGGTGACCAAGGCGGTGCAGGCGAGGAAGGAGGAGAAGCTGAGGAAGGCGCGGCA
GCAGCTGCAGCAGCTGGAGTCGTCGACGCGGCAGAGCAAGCTGCGGCCGGCGGCCGACGGTGACGACGTCGACGACGACG
ACGACGAGGCCAGCTTGGATGAGAGTCTCGATCAGGTGGTTACATGGACTTGAGCTCTATTCAATCCAACTACTTTTCTC
TCTCTCTCTCTCTCT-----------------------------------------------------------------
-CCCCCGATGCCGCCATGCACGTTCTCTGCATGATTGATGCGCCTTTAATTGCCTTCTCTCCAAGGGTTACTAGTTAGTT
GTTCCTCGCGATTCTCACG---TCTTCCTCAGTTCGTCCACACACAACACTGTAGGTCTTCAGCTTATTAGAAAAGATGG
ATTTTATCTGGGTAATCGCCATTAGAATTTTGGCAGCTGCAAAATCTGCCTAGTTTCGGCAGAAATC--GTTAGCATTTA
GCTAAATGGAGAGAATCAGTTTGGAGTACCTGAC------AATTCTCAAT-CCCAGTTGACATGCATAAAACAAGA----
---TGTGGTCCTGTGGACCCAACTGATTGATGCCAT-GTACCGTCCACAGGGGAATTTAATGCTTAAAATAG-GGGATGC
AGAATGATAAAACAA--------TCATGATGATAAATAAAATAGTGAAGAGTCGCAACTAGTGTCAGGAGCAAAGAATCG
TCTGCGAGATCCCTT--TCTGCTTCCGTTCTGAACCGCGGCAACATGCAAATGTTCCATCTTCTGATTACTCTACACCTG
TGACTGCAGTTGGCACGCCAGGACGGAGGAGATGGCCACCGGAGCTCCGGCGCCCGGCACCGGCAATGGCGGCCCTCGCT
GCACAGCATCGACGAGGCCGCGAGCTGATGCCCGGCCATACATAGCCCTCGGTGGATCTTCTGTATTTTCGGCGTCCACC
CGGCTTCAACAGATTAATCTAGCTCGTGTTT-ATGGTTTGCTGCCACATCTGTGTTGGATCGACACCCCGATACGAGCGG
GCCGCTTCTGAAGCGACTCCGTCGATCGGAGCGTGTCCTGTGTCTTTGTACATTTTCAGGGTTTCTCGTCAGGGTCTGTT
AGTGAGAGCGAGACTGC--CTTTTTCTTTCTTTCTCTTGATACATTTGCACCTGATTAAGATGCATGAAAGAAGTTCAGA
ACACGACTAGCTAAAAT---ATCCATACAAGAGATGATGCCAT-------------------------------------
--------GTTCATAGCCTCTGAGGAGTGATGACACTTCCTCCGTGTTTTGTTGTTGCATCTCTTGGCGCCGAGTTCTCA
ATCATAAGCACGGTGCCGGCTGCGGGCGCACCTGCAAGCTGCGGCTGCAGGTGGTGGGGTGGAATCAGTCGTCTGATGAG
AGCCTTTTGGGCTGGAAGCTCGTTGAGCAGATTCGCGTCGGCGCTGCGCATTAGTTTAGTTTAAGCTCCTGCGAAGAGAG
TTTAAAATTTTGACGCCCACGATACCCAAGCTCTGTGTGTCTGTTTGGCGCTTTGGCGTTTGGCACCGGTGGTTGGTCAC
ATGCTCTCTGTGGGGCGTGGGCTGCGATATGCTGCTGCTGCTGATGATGATGAACAACACAGGAGATGACATTTCCACCG
TAGATTAATGGCCAAGC----TGTTAGTTACTCCTACTTGTTGCTGACCACAATTAGTGACAATTGAATACTGGCAGCAT
CAGCTGCTGTGCTTACCACTAGTTAATGTGGCCGGCACCAAATCGATCCACCCAGCCTCCAATGGCGGGGTGAGTTCCTC
CGTAAGTGGCAGCTTTTGGCCACTAATGCACGCATCAACCGTATGTGGCAAGCTTGGCGGTGGCCGGTG---GCCGCTTT
GTCCATCAAAAGGCCAATTATGCAGGG-----TAATCATATGCTTTGGAGATCGCCTGCAGGCTGCGCCCGAGCCCGCGG
TCGGAAATGAAATCTTC
>chr6B_2
-CAGGTGAATAGCAACAAAACTAGCACTGCCAGAGCACAACATTTTGCTTCAAGTTTAGTGCACGACGACCAACAAAAAC
TGCACGGATGAATGCCAAACAATTTTTAGCGGGGTGGATGTAGGCCCAGTGTCAAGATCAGCTCGGCCAAACCAGCAAC-
-----------------------TTTTGCTTGATCGAGTGCATAGAA-TTCAATTAATTCGGGGAGATAGATAGATAGTA
GATGGAAGC-----------------------------------------------------------------------
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--AAAACTGGTTAATTCGGCCGATCTCCGTCATCCGTACACGACGGCCCACGAAAAGCAATCGTTTTGTAGATGCGGCCG
GTCTCCGTCTCTCGCCGTTTGTTGCTACGCCGGCCGCAGACTGACGTCTCCGACGAGCGGTGCACCCAAAAATGCAGTAC
-----CTGACAGCGTCTGTTCACGTGGTGATCGCGA-GGTCGAAAACGATCGAACCGGTCACCGGGACGGGATATGTACC
ACCACCACGGCACCACCTCGGCAACCGAGCCGTTGCTCTCTCTCCTCTTTATAAAATACTGGCGCACCACACGCTCGCCA
CTTGCTCGCGCTCTCCCTCGCCCACGTTTCCCCGGCCGGCACAGGCTAA--GCCAAGCTATAGGACCAGCACCCAGCTCT
GGTCACGGGGAGCGTGTGTGTGCCC--GTGTGCGGCTGCGGCGGGCCGGAGTGAGCGGGGATGGGGAACTGCCAGGCGGC
GGAGGTGGCGGCGGCGGTGGTGCAGCACCCGGGCGGGCGGGTGGAGCGGCTCTACTGGTCCACCCCCGCGGCGGAGGTGA
TGCGCGCCAACCCGGGCCACTACGTCGCGCTCGTCACGCTCCGGGTCGCCGAGGAGCGCCAGGACGCCGACGGCGGCGGC
GCCCGCCGCACCGTGCGGCTCACCCGCGTCAAGCTCCTCAAGCCCAAGGAGACGCTCCTCCTCGGCCACGTCTACCGCCT
CATCACCGCCAACGGTAGGCTTCGAGTCACCGATTCTCGTCCTCTGCCTCTTCTCCTCCATGCTGTGCCCACTGCTAACA
TGGCATGGAAAAATGGTGCGCGCAGAGGTGACCAAGGCGGTGCAGGCGAGGAAGGAGGAGAAGCTGAGGAAGGCGCGGCA
GCAGCTGCAGCAGCTGGAGTCGTCGACGCGGCAGAGCAAGCTGCGGCCGGCGGCGGACGGTGACGACGTCGACGACGACG
ACGACGAGGCCAGCTTGGATGAGAGTCTCGATCAGGTGGTTACATGGACTTGAGCTCTATTCAATCCAACTACTTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCCGGAAAAAAATTATATGAGACCAGGTCTCATATAATTTCCCCC
TCCGCCGATGCCCCCATGCACGTTCTCTGCATGATTGATGCGCCTTTAATTGCCTTCCCTCCAAGGGCTACTGGTTAGTT
GTTCCTCGCGATTCTCATGTCTTCTTCCTCAGTTCGTCCACACGCAACACTCG-------------------GAAGATGA
ATTTTATTTGGGTAATCGCCATTAGAATTTGTGCAGCTGCAAAATCTGCCTAGTTTCAGCAGAAACC--GTTAGCATTTA
GCTCAATGGAGAGAATCGGTTTGGAGTACCTGACACTGACAATTCTCAGTCCCCAATTGACATGCATAAAACAAGA----
---TGTGGTCCTGTGGATCCAATTGATTGATGCCAT-GTACCGTCCAGAAGGGAAATTAGTGCTTAAAATAGAGGGATGC
AGAATGATAAAAGAATCATG--------ATGGTAAATAAAATAGTGAAGAGTCGCAACTAGTGTCAGGAGCAAAGAATCG
TCTGCGAGATCCCTT--TCTGCTTCTGTTCTGAACCGCGGCAACATGCAAATGTTCCATCTTCTGATTACTCTACACCTG
TGACTGCAGTTGGCACGCCAGGACGGAGGAGATGGCCACCGGAGCTCCGGCGCCCGGCACCGGCAATGGCGGCCCTCGCT
GCACAGCATCGACGAGGCCGCGAGCTGA-GCCCGGCCATGCATAGCCCTCGGTGGATCTTCTGTATTTTCGGCGTCCACC
GGGCCTCGACAGATTAATCTAGCTCGCATCACATGGGTTGCTGCCACATCTGTGTTGGAT--------------------
--CGCTTCTGAAGCGGCTCCGTCGATCGGAGCGTGTCCG-------TGTACATTTTCAGGGTTTCTCGTCAGGATCTGTT
AGTAAGAGTGAGGCTGC--TTTTTTTTTTACTCCTCTTGATACATTTGCACCTGATTAAGATGCATGAAAGAAGTTCAGA
ACACGAGTAGCTAATACTACATCCATACAAGAGATGATGCCATTGCCATGTACCAATGCACATGCACCTGTGCATCGATC
TCGTTCATGCTCATGGCCTCTCATGAGTGATGGCGTTT-CTCTGTG--TTGTTGTTGCAATTCTTGGCGCCGAGTTCTCA
ATCATAAGCACGGCGCCGGCTGTGGGCGCACCTGCAAGCTGCGGCTGCAGGTGGTGGGACGGAATCGTGCG------GAG
AGCCTTTTGGGCTGGAAGCTCGTTGGGCAGATTCGCGTCGGCGCTGCACATTAGTTTATGCTCCTGC-------AGAGAG
TTTAAAAGTTTGACGCCCACGGTACCTAAGCTCT----GTCTGTTTGGCACTTTGGCATTTGGCAATGGTGGTTGGTCAC
ATGCTCTCTGTGGGCTGCCCC------------------------------GAACAACACAGGAGCTGACATTTCCACCA
TAGATTAATGGCCAAGCTGTTAGTTAGTTACTCCTACATGTTGCTAACCGCAGCTCGCGGCGATTGAATACTGGCAGCAT
CAGCTACTGTGCTTACCACTAGTTAATGTGGCCGGCACCAAATGGATCCACCCAGCCTCCCATGGCGGGGTGAGTTCCTC
CGTAAGTGGCAGCTTTTGGCCAGTCCTGGACGCATCAACCGTATGTGGCAGCTTGGCGG--------TGGCAGCCGCTTT
ATCCATCAAAAGGCCAATTATGCAGGG-----TGATCATATGCTTTGGAGATCGCCTGCAGGCTGCGCCCGAGCCCGCGG
TCGGAAATGAAATCTTC
>SNPs
S--------SS-------------------------------------------------------------S-------
-----------S------S----------------------------------S--------------------------
---SSSSSSSSSSSSSSSSSSSS------------------------S-------------------S----------SS
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---S
S---------------------------SS---------------------------------------------S----
------------------------------------------S----------------------------S--S-S-S-
SSSS------------------------------------S---------------------------------------
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---------------------------------------------S--S-------------------------------
----------------------SSSSS-----S------------------S-S--------------------------
---------------------------------------------------------------S----------------
-------------------------------------------S------------------------------------
----------------------------------------------------------------------S---------
--------------------------------S------------------------S--S-------------------
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--------------------S-----------------------------------------------------------
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------S-------------------------------------------------------------------------
----S-------------------------------------------------------S--------S----------
------------------------------------------S---------------S--------SS-----------
-----S----------S---------S----S--S--------------SS-----SSS--------SS----S-S----
------S-------------------------------------------------------S-------------SSSS
SSS---------------------------------S-------------------------------------------
--------------------SSS--------------------S-----------SS------S----------------
---------------SS------S----------------------------------S-------S-------------
SS------------S--S--------------S-----------------------------------------------
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-----------------SS------------------------S----------------------------------S-
-----------------------------------------------------S--------------------------
----S--------------------S--------------------S-S----S--------------------------
---------------------------------------S-----S----------------------------------
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-------S-------------------------------S-------------------S----S-----------S---
------------------------------------------------------------------------------S-
--------------------------------------S----------------S-S----S-----------------
-------------------------------------------------S------------------------------
------------------------------------S---------------------S---------------------
------------------------SS-SSSSS----------------S-----S----------S--------------
-----------------
>forward_413
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-------------------------------------------------------------------------TCAAATC
CTGGTGCTCGCAT-------------------------------------------------------------------
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>reverse_2177
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----------------TTCTGCTCCCGTTCTGAACC--------------------------------------------
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>forward_1313
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-------------GGTAAGCTTCGAGTCTCCGG-----------------------------------------------
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>reverse_2968
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-------CTTTGACGCCCACGATACCT-----------------------------------------------------
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