>input_sequence_56495
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----------------------------------------------------------------ATGGAACCAAAGCATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCTTTAGCAACGAATGTGCCCTAACGATTTCAGTTGA--TTATATA
ACATAGAAATGATCTGCAGGCATTTGGACAAGCAAAGTCATGCCTTAATGGAAACATACCGAGCAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAA-TACTACTAGAATTTTATATTAAGAAGGAATCTCAGGGGTATTTCTTTAGTACTCAA
TTGCTGTCA-----TTTTATATAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTTCCAAAGGTACATTGTTGG---TGCTGCTGTTCTGAATTTCG-CCGTTGTAGTTGTTGAGCTTAGCATCACACTTAC
CATTAAACCAACTGTAACTATATATATCTATACGGTAAAATAGAGGGCTCAGCCAACAGTGCAGATTTACTAATAACTGA
AATATAGCATGCAGAAAATAAATGATA-----ACTTCATAAGTGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGT
CATGCTGCTAAGACTTTCCTGTTATTCTTAAATGGTAACAGCTACTTGTTTCCATATACTGATTATTAAGCCTTTTTTAT
TTTAAGTTGGACAAATAAC-------------------------------------------------------------
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------------------TAGTAGAATAACATTCTTTGGTAATATGTCTCGTCTAA----GTAGAATCAATTGTTATTGA
ACCTCAAGTGATGTAACTGAGGATACAGTAATTCTTAACTTGAATTGCTACCACTCATTTTTTGGGTCTTGCATTTTTTA
TTATTCAAACAA------------------------------------TTTGGCATCCATGTCTAATAAGAC--TAAAGA
A----ATGCTGATTGAGCTAGCATTATTCA---------------------------TACAAGTAGCGTTTTTCTAGAAA
CCACTTTAAATGTAAAGTTGAGCTATTCTCAATCCTCCCCCGCAAAAAAAAAAGAGCTATCAATC---------------
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------------------------------------------CTATGTGCTCATACCTGTGTATGTGTTGACACTTCAAG
AGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTATGG-------------------------------T
TTCATGCATTCATGAACTTAGGTCATAAAAGAAACGCTTATTTAGTCCATTTTTCTGTCTTAGGCACTTGAAACGTAAGA
CAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCCCAATAATTGATGCAGCACAAGGAAAAAAGGCAGC
TGGAGAAAGCAGGGGAATCAAGCCAGGAAAACGAAGAACAAGAACCATAG------------------------------
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>chr4D_1_TraesCS4D01G257200
CGGCGACCGCGAGTGGACTAGCAGCGAGGAGCGGCCGCCGGATCGCGGGGCTCTGCGGACCGCACGGCGCGGACGGCGAC
GGCAGCAGATTGCCCCCTTTAAGACATCAATCCGAGCTTTCTCTTTTGGTCAATTTCAGTGCCAGGTTTGTTGTGTCTTC
TGTCTCTCTCCTATTG--TAATATACTTGGTGAAATTTGATTTATCTGGTATGAACTGCGTATGCCTCACCATACCTTAC
ATCGTTAGTCATGTGAAATTATAAATACTACGGCACTAATTTTATTGGCCATATGACCACTTGCTAATCGAAAACTCCAT
CTTCTTTGCATACTCATGTTTTCTCCTGAATCCCAATTGAATGGGTGTCTACAGCATGTTATGTGTTTTTATCTGTTTAT
CAATCTCAAATCATATTTGTGGGTATCCCCAAGACTCAGATTAGCTGTAATGGCAAATTATATCCTTTTTCATGCACACT
TATAAACACAAGCCTTTAACAGCAATGGTGTGGAGGAATTTTGCACATGGTGGCACTTTGAACTATGGGTATGTTTGAAT
GCATTCTTTACATAAAAAAACTTGCTCTCTGCTTGTTAGGCACTTGT---------------------------------
-----------------------------------------------------------------ACTAGTACTACTAGT
TGCTGTGGAGATATTCAGTATTGACTGTCTAATGGGGCTAGTCTAATTAATTGGGCGTGGAATATATATCTCT-ACAAGC
GTACATAATTTTCATGTT-TGTTTTTGTGTATATTGATGTATCACAAGCATGAGAATCAAGTATCGTACTAGCTATTTAC
TGTTCAAAATAGTACTGGTACTGGTTTTCGTCTATTTCTGGATCCT-CCCCTTTTAGTAAATTTACAATATGTGGAGGAC
AGCTTCTAGCTTGATTTGAAATAATTTCTAATCAGCCAAATAATTTGCAGGGAGCAGTACAAGGTT-TTTCTTCTGTCAA
GAGGGGTGGGTGTTCTCGCATTTCCTCAAGCAGAGGAGAAGCAGTATAAAGTTGTTTAGTGATAATGGAACCAAAGCATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCTTTAGCAACGAATGTGCCCTAACGATTTCAGTTGA--TTATATA
ACATAGAAATGATCTGCAGGCATTTGGACAAGCAAAGTCATGCCTTAATGGAAACATACCGAGCAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAA-TACTACTAGAATTTTATATTAAGAAGGAATCTCAGGGGTATTTCTTTAGTACTCAA
TTGCTGTCA-----TTTTATATAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTTCCAAAGGTACATTGTTGG---TGCTGCTGTTCTGAATTTCG-CCGTTGTAGTTGTTGAGCTTAGCATCACACTTAC
CATTAAACCAACTGTAACTATATATATCTATACGGTAAAATAGAGGGCTCAGCCAACAGTGCAGATTTACTAATAACTGA
AATATAGCATGCAGAAAATAAATGATA-----ACTTCATAAGTGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGT
CATGCTGCTAAGACTTTCCTGTTATTCTTAAATGGTAACAGCTACTTGTTTCCATATACTGATTATTAAGCCTTTTTTAT
TTTAAGTTGGACAAATAAC-------------------------------------------------------------
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------------------TAGTAGAATAACATTCTTTGGTAATATGTCTCGTCTAA----GTAGAATCAATTGTTATTGA
ACCTCAAGTGATGTAACTGAGGATACAGTAATTCTTAACTTGAATTGCTACCACTCATTTTTTGGGTCTTGCATTTTTTA
TTATTCAAACAA------------------------------------TTTGGCATCCATGTCTAATAAGAC--TAAAGA
A----ATGCTGATTGAGCTAGCATTATTCA---------------------------TACAAGTAGCGTTTTTCTAGAAA
CCACTTTAAATGTAAAGTTGAGCTATTCTCAATCCTCCCCCGCAAAAAAAAAAGAGCTATCAATC---------------
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------------------------------------------CTATGTGCTCATACCTGTGTATGTGTTGACACTTCAAG
AGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTATGG-------------------------------T
TTCATGCATTCATGAACTTAGGTCATAAAAGAAACGCTTATTTAGTCCATTTTTCTGTCTTAGGCACTTGAAACGTAAGA
CAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCCCAATAATTGATGCAGCACAAGGAAAAAAGGCAGC
TGGAGAAAGCAGGGGAATCAAGCCAGGAAAACGAAGAACAAGAACCATAGAATGTTAACCGTGAATCTGCAATATATGAT
GTTCCATGGGGAT-----------------GCAACCGATCTTCGGTATCCACTCCAATGGATATTA-CTGTAGTGAAA--
TTTTTGTCTCAGTTCCAGCAGTTAGTT----TCCCTGTAATTTTCCAAACTGCACAACGGAACCTTGAATCTGGCTACTG
TTCTGTGAGGAATTTTGAGATGGATTTCG-AACCTTGTTTGTTCCTAGACGCTTTGGAAAGCTTGGGG-CATGCATGACT
AGCACATGAATTTTATGAATCTTGAATGTGACTACTGTTCAAA-------CTTGTCAGTGAGGAATGGGCAGCTGACTCT
AGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAATCTTGTGTTTTGAGATGGGTTTCCTGTCGTGCTACTTGTTTGT
TCCTGGTCGCTTTGGAAAACCTGGGGCATAACTAGCACATGATTTTTGTGAAGTTAGTAGATTCTTGGACAGTGGACGCA
ATATGAAATGTTTAACAGGCCA-GATAATTTTCATCATTGCTAATATATTTTCCATTCCCTTTGCTTGGAGCAGGCGACA
CGACAC------TG---ACTACTCTCCATTGCAACGCTGGATGCATTCAGTGTCCATTGGATAGTGGAACACAGTTCTCT
GGTAGTCTATGCA-------------------------------------------------------------------
--------------------------------------TA-----------ATCTTTCAAGCTTCAGCACGGTCAGTGTA
TGGATGGAATTACCTGATGATGCATGTTAGCATTCTGACGAAGCAAGCTAAAAGCACATGTGTTATCGTAGCTACAATCA
CAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGACCTCGGCCTCTGAAATGATC-------------------
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---AAGTGTTGATCCCTGTTAGATATGCGGTAGCATATGATCAGGAACAGTTGTGTGGGTTTCT-----------CTCAG
ACCTG--------CATCTACACTCGGATGATCTTCTTTAGTTAGGTGTTCACTCTGATCTTGATCCAGCGACCCCCTGTC
---ATTCCTGTGAACCAGTATGTAGATAGTCGAGAAGATGACCTGGGGGACGC
>chr4A_1
CGGCGACCGTGAGTGGACTAGCAGCGAGGAGCGGCCGCCGGATCGCGGGGCTCTGCGGACCGCGCGGCGCGGACGGCGAC
GGCAGCAGATTGCCCCCTTTAAGACATCAATCCGAGCCTTCTCTTTTGTTCAATTTCAGTGCCAGGTTTGTTGTGTCTCC
TA----TCTCCTATTG--TAATATACTTGGTGAAATTTGATTTATCTGGTATGAACTGCGTATGCCTCACCATACCTTAC
ATCGTCAGCCATGTGAAATTATAAA---TACGGCACTAATTTTATTGGCCATATGAGCACTTGCTAATCGAAAAATTCTT
CTTCTTTGCATAGCCATGTTTTCTCCTGAATCCCAATTGAATGGGTGTCTACAGCGTGTT-TGTGTTTTTATCTGTTTAT
CAATCTGACATCATATTTGTGGGTATCCCCAAGACTCAGATTAGCTGTAACGGCAAATTATATCCTTTTTCATTCACACT
TGTAAACACAAGCCTTTAACAGCAGTGG----------------------------------------------------
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----------------------------------------------------------------------TGTGGAGGAC
AGCTTCTAGCTTGATTTGAAATGATTTCTAATCAGCCGAATAATTTGCAGGGAGCAGTAT--AGTT-TTTCTTCTGTCAA
GAGGGGTGGGCGTTCTCTCATTTCCTCAAGTAGAGGAGAAGCGGTATAAAGTTGTTTGGTGCTAATGGAACCAAAGCATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCTTTAGCAACAAATGAGCCCGAACAA-TTCAATTGA--TTATATA
ACATAGAAATGATCTGCAGGCATTTGGACAAGCAAAATCATGCCCTAATGGAAACATACCGAGTAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAGACACTACTAAGCTTTTATGTTAAGAAAGAATCTCATGGGTATTTCTTTAGTAATCAA
TTGCTGTCATTTTATTTTATATAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTTCCAAAGGTACTTTGTTGG---TGCTGCTGTTCTGCATTTGGACCGTTGGAGCTGTTGAGCTTAGCATCACATTTAC
CATTAAACCAACTGTAACTATATATATCTATACGGTAAAATAGAGGGCTCAGCCAACAGTTCAGGTTTACTAATAACTGA
AATAAACAGTGCAGAAAATAAATGATA-----AATTCATAAGAGAATGAGAAATTTGATTTTTAGGAGGAAATGACCTGT
CATACTGCTAAGACTTTTCTGGTATTTCTAAATGGCAACCCTTACTTGTTTCTCTATACTGATTAAGCC----TTTTTAT
TTTAAGTTGGACAAATAAC-------------------------------------------------------------
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------------------TAGTAGAATAACATTCTTTGGTAATATGGCTCGTCTAATAAAGTAGAATAAATTGTTACCGA
ACATTAGGTGATATAACTGAGGATACAGTAATTCTTAACTTGAATTGCTCGCAGTCATTTTTTGGGGTTTGCATTTTTTA
TTATTCAAACAA-----------------------------CAGACAATTTGGCATTCACCTCTTAAGT-----TAAAGA
G----ATGCTGATTGAACTAGCATATTCTCACGCAGCTTTTGCACCACGGGTTGAAGTAAAAGTAGAA-TTTTTTAGAAG
CCGTTATAAATGTAAAGTTGAGCTAATCTCAAA-------------------------------C---------------
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------------------------------------------CTATGTGCACATACG------TCTGTTGTCACTTCAAG
TGAGAGTCACTGATTCCTAAGAAAAGCCTCTACTTTCTCCACTTA-GG-------------------------------T
TTCATGCATTCATTAACTCAGGCCATAAAAGAAACGCTTATTTAGTCCACTTTTCTGTCTTAGGCACTTGAAACGTAAGA
CAAT-AACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCCCAATAATTGATGCAGCACAAGGAAAAAAGGCAGC
CGGAGAAAGCTGGGGAATCAAGCCAGGAAAACGAAGAACAGGAACCATAGAATGTTAACCGTGAATCTGCAGTATATGAT
GTTACATGGGGATGCAAGTTTGGCTGAATAGCAACAGATCTTTGGTATCCACTCCAATGGATATATTCTGTAGTGAAA--
TTTTTGTCTCAGTTCCAGCAGTTAGTT----TCCCTGTAATTTTCCAAACTGCACAATTTTATATTGAATCTGGCTATTG
TTCTGTGGGGACTTTTGAGATGGGTTTCG-AGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTTTGGGGCATGCATGACT
AGCACATGAATTTTGCGAATCTTGAATGTGACTATCGTCCAAACTCGAATCTTGTCAGTGAGGAATGGGCAGCTGACTCT
AGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAATCTTGTGTTTT--------------------------------
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--------------------------------CATCATTGCTAA-ATATTTTCCATTCCCTTTACTTGGAGCAGGTGAGA
CGATAC------TGACTA-----CTGCATTGCAACGCTGGATGAATTCAGTGTCCATTGGGTAGTGGAACACAGTTCTCT
GG------------------------------------------------------------------------------
--------------------------------------TAGTGTATGCATAATCTTTCAAGCTTCAGCACGGTCAATGTA
TGGATGGAATTACCTGCTGATTCATGTTAGCATTCTGACAAAGCAAACTAACAGCACATCAGTTATCGTAGCTACAATCA
CAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTGAAATGATC-------------------
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--CAGGTGTTGATCCATGTCAGATACGCGGTAGCATATATC---------------------------------------
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-----------------------------------------------------
>chr4B_1
CGGCGACCGCGAGTGGACTAGCAGCGAGGAGCGGCCGCCGGATCGTGGGGCTCTGCGGACCGC---------------AC
GGCAGCAGATTGCCCCCTTTAAGACATCAATCCGAGCTTTCTCTTTTGGTCAATTTCAGTGCCAGGTTTGTTGTGTCTCC
CA----TCTCCTATTGTATAATATACTTGGTGAAATTTGATTTATCCGGTATGAACTGCATATGTCTCACCATACCTTAC
ATCGTTAGTCCTGTGAAATTATAAA---TACGGCACTAATTTTATTGGCCATATGACCGCTTGCTAATCGAAAACTTCAT
CTTCTTTGCATAGTCATGTTTTCTCCTGAATCCCAATTGAATGGGTATCTACAGCATGTT-TGTGTTTTTATCTGTTTAT
CAATCTCAAATCATATTCGTGGGTATCTCCAAGACTCAGATTAGCTGTAATGGCAAATTATATCCTCTTTCATTCACACT
TGTAAA-ACAAGCCTTTAACAGCAGTGGTGTGGAGGAATTTTGCACATGGTGGCATTTTGAACTACGGGTATGTTTGAAT
GCTTTCTTTACATAAGAAAACCTGTTCTATGATTGTTATGCACTTGTACATTTGATTACACAGCGTGCACCTGATAATCT
TAGCTTGATTGTGGTGATTCTTATTAGTTAATTCAGGTAACCCTAGGAGTACGGAGTACCCATGTACTAGTAATACTAAT
TGCTGTGGAGATATTCAGTATTGACTGTCTAATGGGGCTAGTCTAATTAATTGGGCGTGGAATATATATCTCT-ACAAAC
ATACAT-ATTTTCATGTT-TGTTTTTGTGTATATTGATGTATCACAAGCATGACACTCAAGTATCGTACTAGCTATTTAC
TGTTCAAAATAGTACTGGTACTGGTTTTCGTCCATCTCTGGATCCT-CCCCTTTTAGTAAATTTACAGTATGTGGAGGAC
AGCTTCTAGCTTGATTTGAAAT-AATTCTAATCAGCCAAATAATTTGCAGGGAGCAGTACAAAGTT-TTTCTTCTGTCAA
GAGGGGTGGGTGTTCTCGCATTTCCTCAAGCA---GAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAACATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCTTTAGCAAAAAATGTGCCCTAACGATTT-AGTTGA--TTATATA
ACATAGAAATGATATGCAGGCATTTGGACAAGCAGAATCATGCCTTAATGGGAACATACCGAGCAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAAATACTACTAGACTTTTATATTAAGAAGGAATCTCAGGGGTATTTCTTTAGTAATCAA
TTGCTGTCA-----TTTTATATAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTTCCAAAGGTACATTGTTGG---TGCTGCTGTTCTGAATTTCGTT-GTTGTAGTTCTTGAGCTTAGCATCACACTTAC
CATTAAACCAACTGTAACTATATATATCTATACGGTAAAATAGAGGGCTCAGCCAATTGTGCAGATTTACTAATAACTGA
AATATACCATGCAGAGAATAAATGATA-----AGTTCATAAAAGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGT
CATGCTGCTAAGACTTTCATGTTATTCCTAAATGGTAACAGTTACTTGTTTCCCTATACTGATTAAGCCT--TTTTTTAT
TTTAAGTTGGACAAATAAC-------------------------------------------------------------
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------------------TAGCAGAATAACATTCTTTGGTAATATGTCTCGTCTAA-AAAGTAGAATCAATTGTTACTGA
ACATCAAGTGATGTAACTGAGGGTACAGTAATTCTTAACTTG------------TCATGTTTTGGGTCTTGCATTTTTTA
TTATTCAAACAA------------------------------------TTTGCCATCCATGTCTAATAAGACTATAAAGA
A----ATGCTGCTTTAGCTAGCATTATTCA---------------------------TACAAGTAGCGTTTTTCTAGAAA
CCACTGTAAATGTAAAGATGAGCTATTCTCAAA-------------------------------CCT-------------
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>chr3D_642
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---------------------TGACTGTCTAATGGGGCTAGTCTAATTAATTGGGTGTGACATATATATCTCT-ACCAGC
ATGCAT-AATTTTCA--TGTTTTTTTGTGTATATTGATGTATCGTAAGCATGAGACTCAAGTATCGTACTAGCTATTTAC
TGTTCAAATTTTA----GTACTGGTTCTCGTCTATTTCTGGACCCA-CCCCTTTTGGTAAATTTACAGTATGTGGAGGAC
AGCTTCTAGCTTGATTTGTAAGAAATTCTAATCAGCCAAATAATTTGCAGGGAGG-GTATAAAGTTTTTTCTTCTGTCAA
GAGGGGTGGGTGTTCGCGCATTTCCTCAAGTAGAGAAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAGCATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCTTTAGCAACAAATGAGCCCTAAAGATTTCAATT-A--TTATATA
ACATAGAAATGATTTGCAGGCATTTGGACAAGCAAAATCATGCCCTAATGGAAACATACCGAGCAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAGATACTACTAAGCTTTTATGTTAAGAAGGAATCTCAGGGGTATTTCTTTAGTAATCAA
TTGCTGTCA-----TTTTATGTAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTTCCAAAGGTACATTGTTGTTGCTGCTGCTGTTCTGAATTTGGACCGTTGGAGCTGTTGAGCT---------------
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-------------------AGCATATTCTCACGCAGCTTTTGTACCACGGGTTGAAGTAAAAGTAGCG-TTTTTTAGAAG
CCGTTATAAATGGAAAGTTGAGCTAATCTCAAA-------------------------------T---------------
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------------------------------------------CTATGTGCACATACG------TGTGTTGACACTTCAAG
TGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTACAG-------------------------------T
TTCATGCATTCATGAACTTAGGCCATAAATGAAATGCTTACTTAGTCCATTTTTCTGTCTTAGGCACTTGAAACATAAGA
CAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCTCAATAATTGATGCAGCACAAGGAAAAAAGGGAGC
CTGAGAGAGCAGGGGAATCAAGCCAGGAAAACGAAGAACGGGAACCATAGAATGTTAACCGTGAATCTGCAATATATGAT
GTTACATGGGGATGCAAGTTTGGCTGAATAGCAACCGATCTTAGGCATCCACTCCAATGGATA-TA-CTGTAGTGAAA--
TTTTTGTCTCAGTTCCAGCAGTTAGTTAGTTTCCCTGTAATTTTCCAAACGGCACAATGGAATCTTGAATCTGGCTATTG
TTCTGTGAGGAATTTTGGGATGGGTTTCAAAGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTTGGGG-CATGCATGACT
AGCACATGAATTTTGTGAATCTTGAAAGTGACCACCGTCCAAA-------CTTGTCAGTGAGGAATGGGCAGCTGA--CT
AGTCTGTTTTACCTTT-GCACATGTTGTGCATGATAATCTTGTGTTTTGAGATTGGTTTCCTGTCGTGCTACTTGTTTGT
TCCTCGTCGCTTTGGAAAACCTGGGGCATGACTAGCACATGATTTTTTTGAAGTTAGTAGATTCTTGGACAGTGGACGCA
ATATGAAATGTTGAACAGGC-AAGATAATTTTCATCATTGCTAATATATTTTCCATTCCCTTTACTTGGAGCAGGCGAGA
CGATCACGATACTGACTA---CTCTGCATTGCAACGCTGGACGCATTCAGTGTCCATTGGGTAGTGGAACACAGTTCTCT
GG------------------------------------------------------------------------------
--------------------------------------TA-----------ATCTTTCAAGCTTCAGCACGGTCAGTGTA
TGGATGGAATTACCTGCTGATGCATGTTAGCATTATGACAAAGTAAACTAACAGCACATGTGTTATCGTAGCTACAATAA
TAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTGAAATGATC-------------------
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--CAAGTGTTGATCCATGTCAG----------------------------------------------------------
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>chr3B_642
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---------------------TGACTGTCTAATGGGGCTAGTCTAATTAATTGGGTGTGACATATGTATCTCTAACCAGC
ATGCAT-AATTTTCA--TGTGTTTTTGTGTATATTGATGTATCATAAGCATGAGACTCAAGTATCATACTAGCTATTTAC
TGTTCAAAATTTA----GTACTGGTTCTTGTCTATTTCTGGACCCTCTCC-TTTTGGTAAATTTACAGTATGTGGAGGAC
AGCTTCTAGCTCGATTTGTAAGAAATTCTAATCAGCCAAATAATTTGCAGGGACG-GTATAAAGTT-TTTCTTCTGTCAA
GAGGGGTGTGTGTTCGCACATTTCCTCGAGTAGAGAAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAGCATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCCTTAGCAACAAATGAGCCCTAAAGATTTCAATT-A--TTATATA
ACATAGAAATGATTTGCAGGCATTTGGACAAGCAAAATCATGCCCTAATGGAAACATACCGAGCAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAGATACTACTAAGCTTTTATGTTAAGAAGGAATCTCAGGGGCATGTCTTCAGTAATCAA
TTGCTGTCG------TTTATATAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTCCCAAAGGTACATTGTTGG---TGCTGCTCTTCTGAATTTGGACCGTTGGAGCTGTTGAGCTTAGCATCACATTTAC
CATTAAACCAACTGTAACTATATATATCTATACGGTAAAATAGAGGGCCCAGCCAACAGTTC-----TACTAATAACTGA
AATATACAGTACAGAAAATAAATGATAAATTAAATTCGTAAGAGAGTGAGGAATTTGA-TTTTAGGAGGAAATAACCTGT
GATACTGCCAAGACTTTCCTGGTATTTCTAAATGGTAACCCTTACTTGTTTCTCTATACTGATTAAGCCC--TTTTAT-T
TTAAAGTTGGAGAAATAACTACTCCCTCCGTTCCAAATATAAGTCTTTGTAGAGATTTCACTATGGACTACATACGGAGC
AAAATGAGTGAATCTACACTCTAAAATGCATCTACATACATCTGTATGTGGTTCATAGTAGAATCTCTCCAAAGACTTAT
ATTTAGGAACGGAGGGAGTAGTAGAATAGCATTCTTTGGTAATATGGCTTGTCTAATAAAGTAGAATCAATTGTTACTGA
ACAATAAATGATATAACTGAGGATACAGTAATTCTTAACTTGAATTGGTAGCAGTAATTTTTTGGGGTTTGCATTTTTTA
TTATTCAAACAT------------------------------------TTGTTTGGGGTTTGCATTTTTTATTATTCAAA
CAATTATGCTGACTGAACTAGCATATTCTCACGCAGCTTTTGTACTACGAGTTGAAGTAAAAGTAGCG-TTTTTTAGAAG
CCGTTATAAATGTAAAGTTGAGCTAATCTCAAA-------------------------------C---------------
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------------------------------------------CTATGTGCACATACG------TGTGTTGACACTTCAAG
TGAGAATCATTGATTCCTAAGAGAAGCCT--ACTTTCTA-----------------------------------------
------------------TAAGCCATAAATGAAGCGCTTATTTAGTCCATTTTCCTGTCTTAGGCACTTGAAACATAAGA
CAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAATCAATCTCTCAATAATTGATGCAGCACAAGGAAAAAAGGCAGC
CGGAGAGAGCAGGGGAATCAAGCGAGGAAAACGAAGAACAGGAACCATAGAATGTCAACCACGAATCTGCAATAGATGAT
GTTACATGGGGATGCAAGTTTGGCTGAATAGCAACCGATCTTAGGTATCCACTCCAATGGATA-TA-CTGTAGTGAAA--
ATTTTGTCTCGGTTCCAGCAGTTT----GTTACCCTGTAATTTTCCAAACTGCACAATGGGATCTTGAATCTGGCTATTG
TTCTGTGAGGAATTTCGAGACGGGTTTCAAAGCCTTGTTTGTCCCTAGACGCTTTGGAAAGCTTGGGG-AAAGCATGACT
AGCACATGAATTTTGTGAATCTTGAAAGTGACCACCGTCCAAA-------CTTGTCAGTGAGGAATGGGCAGCTGA--CT
AGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAATCTTGTGTTTTGAGATTGGTTTCCTGTCGTGCTACTTGTTTGT
TCATGGTCGCTTTGGAAAACCTGGGGCATGACTAGCACATGATTTTTGTGAAGTTAGTAGATTCTTGGACAGTGGACGCA
ATGCC-----------------AGATAATTTTCATCATTGCTA--ATATTTTCCATTCCCTTTACTTGGAGCAGGCGAGA
CGATGC------TG---A---CTATGCATTGCAATGCTGGATGCATTCAGTGTCCATTGAGTAGTGGAACACAGTTCTCT
GG------------------------------------------------------------------------------
--------------------------------------TA-----------ATCTTTCAAGCTTCAGCACGGTCAGTGTA
TGGATGGAATTACCTGCTGATGCATGTTAGCATTCTGACAATGCAAAATAACGGCACATGTGTTATCGTAGCTACAATCA
CAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGTTCGGCCTCTGAAATGATG-------------------
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--CAAGTGTTGATCCATGTCAGATACACAGTAGCATATGATCAGGAACAGTTGTGTGGGGTGTCACGCTCAGACGGTCAG
ACCTG--------CATCTACACTCTGAAGACCTTCATTTAGGCGT--TTCACTCTGATCTTGATCCAACGACTCCTTGTT
---ATTCCGGCGAAT---TATGTTGATAGGTGAGAAGATGACCTGGGCGATGC
>chr3A_670
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-------------------------------------------------ATTGGGTGTGAAATATATATCTCT-ACCAGC
ATGCAT-AATTTTCA--T-TTTTTTTGTGTATATTGATGTATCATAAGCATG-GACTCAAGTATCATACGAGCTATTTAC
TGTTCAAAATTTA----GTACTGGTTCTCGTCTATTTCTGGACCCTCCCCCTTTTTGTAAATTTACAGTATGTGGAGGAC
AGCTTCTAGCTTGATTTGAAAGAAATTCTAATCAGTCAAATAATTTGCAGGGAGA-GTATAGAGTT-TTTCTTCTGTCAA
GAGGGGTGGGCGTTCACACATTTCCTCAAGTAGAGAAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAGCATT
CTGCTGAAATGTCCAGGTGCAACATCTTGACTAACCTTTAGCAACAAATGAGCCCTAAAGATTTCAATT-ATTTTATATA
ACATAGAAATGATCTGCAGGCATTTGGACAAGCAAAATCATGCCCTAATGGAAACATACCGAGCAATGTCCCATGAGTTG
CATAAACTACAGGTGAGCCTCAGATACTACTAAGCTTTTATGTTAAGAAGGAATCTCAGGGG-ATTTTTTCAGTAATCAG
TTGCTGTCA-----TTTTATATAGGTTGAAGAGGAAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCT
TCTTCCAAAGGTACATTGTTGT---TGCTGCTGTTCTGAATTTGGACCGTT----------------GCATCACATTTAC
CATTAAACCAACTGTAGCTATATATATCTATAAGGTAAAATAGAGGGCCCAGCCAACAGTTCAGATTTACTAATAACTGA
AATATACAGTGCAGAAAATAAATGATTAATTAAGTTCTTAAGAGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGT
GATACTGCCAAGATTTGCCTGGTATTTCTAAATGGTAATCCTTACTTGTTTCTCTATACCGATTAAGCCT--TTTCAT-T
TTAAAGTTGGACAAATAAC-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TAGTAGAATAACATTCTTTGGTAATATGGCTCGTCTAATAAAGTAGAATCAATTGTTACTGA
ACAATAAGTGATATAACTGAGGATACAGTAATTCTTAACTTGAAGTGCTAGCAGTCATTTTTTGGGGTTTGCATTTTTGA
TTATTCAAACAAATTTTGGGGGATTGCATTTTTTTATTATTCAAACAATTAGGCATTCACCTC-TAAGT-----TAAAGA
G----ATGCTGATTGAACTAGCATATTCTCACGCAGCTTTTGTACCACGGGTTGAAGTAAAAGTAGCG--TTTTTAGAAG
CCGTTATAAATGTAAAGTTGAGCTAATCTCAAA-------------------------------CTGTTATGGCGCTGCT
AGAAGGAGGGCGCGAGAGGGCCGGCCGGGGGCCTTTTGCCCACGGCCGGGCAAGATGGAAGGGATTTCCTTCTTAATTCT
TGCTTGATTAGATTGATACATCTCCTCTCTTTATGTAGAGAGGTTTACTTGACTCCCAAGCAAGGCTTACTTGACCCCTA
AGAAAGCGACCCTTATCTCTAATTAACCCTAAGACTAACGGGCTATAGACCCAAAGTGGTCGGACCCTTCCCTGGACCCT
GCGCAAGCGGGAGCTACATGCACCAGGTTGCCCTTTTTACTAACGGGCTATACCGCCAGCCCAGGCCATTAGGCCCATTA
CGTACTCTAACACTACACCCCACCTGGACATGCAGCTTGTCCTCAAGCTGCAGCCTAACCAACTTATAACCATGACTCGA
GGCAACACAAACCTAACACCTAAAAACAAGCCTTTTACATCTTGGCTTGTTTTATTACTCTCAACCTGAAATGGACTGGG
ATGATTTATTTTGGACCTCTTAACAAAAAGTGGATACCATCCGCACGTCGGACGTGCACGTGTACAGCCACCTGGATCCC
ATGGACACCATCTGGACAAAAGCAGTGCATGTGTATGGCCACCTGGAAGTGGTCGCAAGAGCGACCAGCAGAGGCGCCCT
CGCGGCGGCCGGCGGCGGAATGCAGTGGTGCTACACGGTGCGCTCTTGTCGGTGACACCATGCCTTCTCCCCGCCGGATG
GCTGTTGGTCGGCACCGCACATAGAAGAGTGGAGGGTTGTCGATGGACAATGGCGAGGAGGGGTGCGCCTCCCCAACCGC
CGATGTCGCAGACTTTGAGGGCGTTGTCCGTGGGGAAAACAGCATGCCCAAGATCCCCGACGCAGCGGACGAGATCGAGG
TCCTTTGCGCAGCGAAGCGCAACTGGGAGGAGCGGCAGCTGCAGACCACGCAACTCCCGCACACGCCGACGCGCTAGGAG
GCTGCGTGCAGCAGCCTGCAGCCTCACCGTCGCCGACACGTGGCGGGTAGTGATCCAAGCTGGAAGCGGTGACGGCGACG
GCGGAAGCTTGATCTGCTGGATGGGGACGCCCTGGGGAAGCGGTGATGGCGACGGCGGGAACTTGATCTGGTGGATCGGG
ACTCCCGTCGGCGCGGTCGATGCGGGGCTGGAGCTGACCGGTGATGGCTGCTGTAGTTGCAGCGGCTGCTGCGGCGGAGC
GCCGGGCGCGGCAGAGGTCGCCAGGAGCGGTGGCTGCCACTGCAGCCAGGGCGGGGCGGTGGATGGCAGCTGCTGCAGCG
GCCTGATGAGCGCGGCGGAGGCCACCTGGTGCGGCGGCTGCCACGGCAGCCAGGACGGGGCGGTGGTGGCGGTGGATGGC
AGTTGCAGCGGCTGCTGCAGCAGCCCGACGAACGCGGCGGAGGCCGCCTGGTGCGGCGGCTGCCACGGCAGCCAGGACGG
GGCGATGGATGGCAGCTGCAGCGGCTGCTGCAGCAGCCCGGCGAGCGCGGCGGGGGCGGCTCGGTGTGGCGGCAGCCACG
GCGGCGCGGTGGCGGTGATGGGCGGCGCAGCCGGGTGCGGCCCATAGGACCCGGCCAAGAACAAATGGATCTCCTGGACC
GCCTGTGTTAGGTCCCGCAACGCCTCGGACACCTCCGGGGTGAGGACGACGGGGGCGGGCGCGACGGAGGATCCCGGTGC
GGGCAGGAGCGGGGCGACGGTCGTGACCGGCAGCGGAAGAGACGGGTTGGGCGGCGGTGAAGACATGATCGAACCGAAGC
TAGCTGATACCAAATTGTTATGGCGCTGCTAGAAGGAGGGCGCGAGAGGGCCGGCCGGGGGCCTTTTGCCCACGGCCGAG
CAAGATGGAAGGGATTTCCTTCTTAATTCTTGCTTGATTAGATTGATACATCTCCTCTCTTTATGTAGAGAGGTTTACTT
GACTCCCAAGCAAGGCTTACTTGAACCCTAGGAAAGCGACCCTTATCTCTAATTAACCCTAAGACTAACGGGCTATACCG
CCAGCCCAGGCCATTAGGCCCATTACGTACTCTAACACAAACCTATGTGCACATACG------TGTGTTGACACTTCAAG
TGAGAATCACTGATTCCTAAGAAAAGGCT--ACTTTCTCCACTTACGGTTTCATGCATTCATGCACTTTTTTTTGAAACT
TTCATGCATTCATGCACTTAGGCCATAAATGAAACACTTATTTAGTCCATTTGTCTGTCTTAGGCACTTGAAACATAAGA
CAATCAACTTCATTTCATGCTGCTCTGTCTCCTTTAACCAATCTCTCAATAATTGATGCAGCACAAGGAAAAAAGGCAGC
CGGAGAGAGCAGGGGAATCAAGCCAGGAAAGCGAAGAACAGGAACCATAGAATGTCAACCGTGAATCTGCAATATATGAT
GTTACGTGGGGATGCAAGTTTGGTTGAATAGCAACCGATCTTAGGTATCCACTCCAATGGATA-TA-CTGTAGTGAATTT
TTTTTGTCTCGGTTCCAGCAGTTA----GTTTCCCTGTAATTTTCCAAACTGCACAACGGAA------------------
----------AATTTTGAGATGGGCTTCAAAGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTTGGGG-CATGC------
---------ATTTTGTGGATCTTGAAAGTGACCACCGTCCAAA-------CTTGTCTGTGAGGAATGGGCAGCTGA--CT
AGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAACCTTGTGTTTTGAGATTGGTTTCCTGTCGTGCTACTTGTTTGT
TCCTGTTCACTTTGGAAAACCTGGGGCATGACTAGCACATGATTTTTGTGAAGTTAGTAGTTTCTTGGACAGTGGACGCA
ATATGAAATGTTTAACAGGC-A-GATAATTTTCATCATTGCTAACATATTTTCCATTCCCTT-ACTTGGAGCAGGCGAGA
CGATAT------TGACTA---CTCTGCATTGCAACGCTGGATGCATTCAGTGTCCATTGGGTAGTGGAACGCAGTTCTCT
GG------------------------------------------------------------------------------
--------------------------------------TA-----------ATCTTTCAAGCTTCAGCACGGTCAGTGTA
TGGATGGAATTACCTACTGATGCATGTTAGCATCCTGACAAAGCAAACTAACAGAACATGTGTTATCGTAGCTACAATCA
CAGGTGTGCCCATAATGGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTGAAATGATCGAACGACGCGTGTGGTTCG
GCCCCAGTAACGTATTGATTTTATCGTATCAGGAACCTCCGCTTCCGATTAGTTTTATGGAAAACCCGCTTCGTTTGGTT
GGCACACATGGCTTCCCGTTTTCCGATTAGTTTTATGGAAAACCCGCTTCGTTTGGTTGGCACACATGGCTTCCCGTTTT
CCAATCAACTCCGATCTGGGGCCTACTTTCATCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTACCTTTGC
ATTCGAGGACTAATGCCCGTCTGGCCCGGTATCGCGAAGTCTTGTATCAGAAACCATGGCTACGGAAGACATTCGGGGCG
TTTGGGCGAACCAAACGCAACTGTACGGTTTCGGGAAGCATTAGAATCGGAAGCCGCGGCTTTTCTGCGAACCAAACGCG
TCGAAGTATTGATCCATGTCAGATATACAGTAGCATATGTTCAGGAACAGTTGTGTGGGTGTC---------ACGCTCAG
ACCGTCAGACCTACATCTACACTCTTGAAGGC--CTTCATTTAGGTGTTCACTCTGATCTTGATCCAGCGACTCCCTGTT
ATTATTCCGGCGAAT---TATGTTGATAGGTGAGAAGATGACCTGG-------
>chr4B_1973
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---------------------------------------------------------------TGTGTTGACAC-TCAAG
AGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTATGG-------------------------------T
TTCATGCACTCATGAACTTACGCCATAAACGAAACGCTTATGTAGTCCATTTTTCTGTCTTAGGCACTTGAAACCTAAGA
CAATCAACTTCATTTCATGCTGCTCTGCCTCCTCTAACCAATTTCCCAATAATTGATGCAGCACAAGGAAAAAGGGCAGC
CGGAGAAAGCAGGGGAATCAAGCCAGGAAAACGAAGAACAGGAACCATA--ATGTTAACCGTGAATCTGCAATGTATGAT
GTTACATG-----------------------------------GGTATCCACTCTAATGGATA-TA-CTGCATAGAAA--
ATTT-GTCTCAGTTCCAACAGTTAAGTGTG--CCGTATAAATTTCCAAACTACACAATGGAATCTTGAATCTGGCCATTG
TTCTGTGAGGAATTTTGAGATGGGCTTCG-AGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTTGGGG-CATGCACGACT
AGCACATGAATTTTGTGAATCTTGAATGTGACTACCGTCCAAA-------CTTGTCAGTGAGCAATGGACAGCTGACTCT
AGTCTGTTTTACCTTACGCACATGCTGTGTATGAGAATCTTGTGTTTTGAGATGGGTTTCCTGTCGTGCTACTTGTTTGT
TCCTGGTCGCTGTGGAAAACCTGGGGCATGACTAGCACATGACTTTTGTGAAGTTAGTAGATTCTTGGACAGTGGACGCA
ATATGAAATGCTTAATAGGCCA-GATAATTTTCATCGTTGCTAATATATTTTGCATTCCCTTTACTTGGAGCAGCCGAGA
CGATACCGAT------TA---CTCTGCATTGCAACGCTGGATGCATTCAGTGTCCATTGGTTAGTGGAACACAGTTCTTT
GGTACTCCCTCCGTTCCGAATTACTTGTCGCATGTATGGTTGTATCTAGATGTATTTTAATTCTAGATACATCCATTTCT
GCGACAAGTAATTTGGAACGGAGGGAGTAGTTCTCTGCTA-----------ATCTTTCAAGCTTCAGCACGGTCAGTGTA
TGGATGGAATTACCTGCTGATGCATGTTAGCATTCTGACAAAGCAAACTAACAGCACATGTGTTATCGTAGCTACAATCA
CAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTCAAATGA---------------------
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TCCAAGTGCTGATCCATGTCAGGTACACAGTAGCATATGATCAGGAACAGTTGTGTGGGTGTC---------ACGCTCAG
ACCTG--------CATCTACACTCTGAAGACCTTCTTCAGTTAGGTGTTCACTCTAATCTTGATCTAGGGACTCGCTGTC
---ATTCCGGTGAACTGGTATGTAGATAGTAGAGAAGATGGCCTGGGGGACGC
>SNPs
---------------------------------------------------------------S----------------
------------------------------------------------------------------------------S-
-SSSSS--------------------------------------------------------------------------
-------------------------SSS------------------------------------------------S---
------------S-----------------------------------------------S-------------------
-------------------------------------------------------------------------S------
-S----------------------S------------------------------S---------S--------------
--S------------S-----S--S---S--S------S-----------------------------------------
------------------------------------------------------------------------S-----S-
--------------------------------------------------------------------------------
S-----S------------------------------------------------S------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------S-----------------
---------------------------------------------------------S----------------------
---------------------------------------------S----------------------------------
------------------------------------S-------------------------------------------
----------------------------------S----------------------------------------S----
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------S--------------------------S--------S-------------------------------------
---------------------------S-------------S-----------S-----------SSSSSSS--------
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----------------------------------------------------------------------------S---
--S-----------------------------------------------S--S--------------------------
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-----S--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
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--------------------------------------------------S-----SSSSSSS-----------------
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----------------------S---------------------------------------------------------
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S---------------------------------------S---------------------------------------
---S--------------------------------------S-------------------------------------
--------------------------------------------------------------S--------------S--
-----------------------S-------S------------------------------------------------
--------------S--------------------S--S-----------------------------------------
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-----------------------------S--------------------------------------------------
---------------------------------------------------------------S--------------S-
---S--------------SSS----S----------------------------------S-------------------
----S--SS-S-S-------------------------------------------------------------------
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----------------S----------------------S------S----S----------------------------
-----------------------------------------S--------------------------------------
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---------------S---S-------------------------------------------S----------------
------------------------S--S--S-----------------------------------------S-------
--------S------SS-------------S----------------------
>forward_159
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----------------------------------------------------------GTGCCAGGTTTGTTGTGTCTT-
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>reverse_2304
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---------------------------------------------------------------TCCTATGTGCTCATACC
TGTGT---------------------------------------------------------------------------
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>forward_2288
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----------------------------TCAATCCTCCCCCGCAAAAA--------------------------------
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>reverse_6271
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------------------------------CGAGAAGATGACCTGGGGGA---
