>input_sequence_56493
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------------------------------ATGGAACCAAAGCATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCTTTAGCAACAAATGAGCCCGAACAA-TTCAATTGA--TTATATAACATAGAAATGATCTGCAGGCATTTGGACAAGCA
AAATCATGCCCTAATGGAAACATACCGAGTAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAGACACTACTAAG
CTTTTATGTTAAGAAAGAATCTCATGGGTATTTCTTTAGTAATCAATTGCTGTCATTTTATTTTATATAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTTCCAAAGGTACTTTGTTGG---TGCTGCTGT
TCTGCATTTGGACCGTTGGAGCTGTTGAGCTTAGCATCACATTTACCATTAAACCAACTGTAACTATATATATCTATACG
GTAAAATAGAGGGCTCAGCCAACAGTTCAGGTTTACTAATAACTGAAATAAACAGTGCAGAAAATAAATGATA-----AA
TTCATAAGAGAATGAGAAATTTGATTTTTAGGAGGAAATGACCTGTCATACTGCTAAGACTTTTCTGGTATTTCTAAATG
GCAACCCTTACTTGTTTCTCTATACTGATTAAGCC----TTTTTATTTTAAGTTGGACAAATAAC---------------
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----------------------------------------------------------------TAGTAGAATAACATTC
TTTGGTAATATGGCTCGTCTAATAAAGTAGAATAAATTGTTACCGAACATTAGGTGATATAACTGAGGATACAGTAATTC
TTAACTTGAATTGCTCGCAGTCATTTTTTGGGGTTTGCATTTTTTATTATTCAAACAA----------------------
-------CAGACAATTTGGCATTCACCTCTTAAGT---TAAAGAG------ATGCTGATTGAACTAGCATATTCTCACGC
AGCTTTTGCACCACGGGTTGAAGTAAAAGTAGAATTTT-TTAGAAGCCGTTATAAATGTAAAGTTGAGCTAATCTCAAAC
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---------------------------------------------------------CTATGTGCACATACGTCTG----
--TTGTCACTTCAAGTGAGAGTCACTGATTCCTAAGAAAAGCCTCTACTTTCTCCACTTA-GGTTTCATGCATTCATTA-
------------------------------ACTCAGGCCATAAAAGAAACGCTTATTTAGTCCACTTTTCTGTCTTAGGC
ACTTGAAACGTAAGACAAT-AACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCCCAATAATTGATGCAGCACA
AGGAAAAAAGGCAGCCGGAGAAAGCTGGGGAATCAAGCCAGGAAAACGAAGAACAGGAACCATAG---------------
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>chr4A_1_TraesCS4A01G047400
GAAATTTTTAATAAAAATAGCGTTCAT-GTTTTTTTAATAATAATAATAAATAAAAAGAAAGTTAATTGGCTGCCTAACG
CGGGCCGAAGTCTGACTCATTGCCGGTTGCCTCGTGGCCCAGCTACGGCCTCGTTACGCACAGGGCCAAACCGTCAAAAA
AATGGCCA--ATAGGTCGGTACGGTGCTATTGGCTGCCGCTGCCATCCCTCAAAAAAAAAAGAAGAACAACTGCCGCTGC
CGCATAG-CC-------------GCCACGGCCAACGCCCCCACACCGCACCGCCACGCCGCGCGCGAGCCAGCAAGAGGG
CGACCGGCGTCGAGCAGGCCCCGGACGGCGGCACCGCGTCGTGCGAGCCGGCGACCGTGAGTGGACTAGCAGCGAGGAGC
GGCCGCCGGATCGCGGGGCTCTGCGGACCGCGCGGCGCGGACGGCGACGGCAGCAGATTGCCCCCTTTAAGACATCAATC
CGAGCCTTCTCTTTTGTTCAATTTCAGTGCCAGGTTTGTTGTGTCTCCTA----TCTCCTATTG--TAATATACTTGGTG
AAATTTGATTTATCTGGTATGAACTGCGTATGCCTCACCATACCTTACATCGTCAGCCATGTGAAATTATAAA---TACG
GCACTAATTTTATTGGCCATATGAGCACTTGCTAATCGAAAAATTCTTCTTCTTTGCATAGCCATGTTTTCTCCTGAATC
CCAATTGAATGGGTGTCTACAGCGTGTT-TGTGTTTTTATCTGTTTATCAATCTGACATCATATTTGTGGGTATCCCCAA
GACTCAGATTAGCTGTAACGGCAAATTATATCCTTTTTCATTCACACTTGTAAACACAAGCCTTTAACAGCAGTGG----
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-----------------------------------TGTGGAGGACAGCTTCTAGCTTGATTTGAAATGATTT-CTAATCA
GCCGAATAATTTGCAGGGAGCAGTAT--AGTTTTT-CTTCTGTCAAGAGGGGTGGGCGTTCTCTCATTTCCTCAAGTAGA
GGAGAAGCGGTATAAAGTTGTTTGGTGCTAATGGAACCAAAGCATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCTTTAGCAACAAATGAGCCCGAACAA-TTCAATTGA--TTATATAACATAGAAATGATCTGCAGGCATTTGGACAAGCA
AAATCATGCCCTAATGGAAACATACCGAGTAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAGACACTACTAAG
CTTTTATGTTAAGAAAGAATCTCATGGGTATTTCTTTAGTAATCAATTGCTGTCATTTTATTTTATATAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTTCCAAAGGTACTTTGTTGG---TGCTGCTGT
TCTGCATTTGGACCGTTGGAGCTGTTGAGCTTAGCATCACATTTACCATTAAACCAACTGTAACTATATATATCTATACG
GTAAAATAGAGGGCTCAGCCAACAGTTCAGGTTTACTAATAACTGAAATAAACAGTGCAGAAAATAAATGATA-----AA
TTCATAAGAGAATGAGAAATTTGATTTTTAGGAGGAAATGACCTGTCATACTGCTAAGACTTTTCTGGTATTTCTAAATG
GCAACCCTTACTTGTTTCTCTATACTGATTAAGCC----TTTTTATTTTAAGTTGGACAAATAAC---------------
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----------------------------------------------------------------TAGTAGAATAACATTC
TTTGGTAATATGGCTCGTCTAATAAAGTAGAATAAATTGTTACCGAACATTAGGTGATATAACTGAGGATACAGTAATTC
TTAACTTGAATTGCTCGCAGTCATTTTTTGGGGTTTGCATTTTTTATTATTCAAACAA----------------------
-------CAGACAATTTGGCATTCACCTCTTAAGT---TAAAGAG------ATGCTGATTGAACTAGCATATTCTCACGC
AGCTTTTGCACCACGGGTTGAAGTAAAAGTAGAATTTT-TTAGAAGCCGTTATAAATGTAAAGTTGAGCTAATCTCAAAC
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---------------------------------------------------------CTATGTGCACATACGTCTG----
--TTGTCACTTCAAGTGAGAGTCACTGATTCCTAAGAAAAGCCTCTACTTTCTCCACTTA-GGTTTCATGCATTCATTA-
------------------------------ACTCAGGCCATAAAAGAAACGCTTATTTAGTCCACTTTTCTGTCTTAGGC
ACTTGAAACGTAAGACAAT-AACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCCCAATAATTGATGCAGCACA
AGGAAAAAAGGCAGCCGGAGAAAGCTGGGGAATCAAGCCAGGAAAACGAAGAACAGGAACCATAGAATGTTAACCGTGAA
TCTGCAGTATATGATGTTACATGGGGATGCAAGTTTGGCTGAATAGCAACAGATCTTTGGTATCCACTCCAATGGATAT-
ATTCTGTAGTGAAA--TTTTTGTCTCAGTTCCAGCAGTTA----GTTTCCCTGTAATTTTCCAAACTGCACAATTTTATA
TTGAATCTGGCTATTGTTCTGTGGGGACTTTTGAGATGGGTTTCG-AGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTT
TGGGGCATGCATGACTAGCACATGAATTTTGCGAATCTTGAATGTGACTATCGTCCAAACTCGAATCTTGTCAGTGAGGA
ATGGGCAGCTGACTCTAGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAATCTTGTGTTTT----------------
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------------------------------------------------CATCATTGCTAA-ATATTTTCCATTCCCTTTA
CTTGGAGCAGGTGAGACGATAC------TGACTA-----CTGCATTGCAACGCTGGATGAATTCAGTGTCCATTGGGTAG
TGGAACACAGTTCTCTGGTAGTGTATGCA---------------------------------------------------
------------------------------------------------------TAATCTTTCAAGCTTCAGCACGGTCA
ATGTATGGATGGAATTACCTGCTGATTCATGTTAGCATTCTGACAAAGCAAACTAACAGCACATCAGTTATCGTAGCTAC
AATCACAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTGAAATGAT-CCAGGTGTTGATCC
ATGTCAGATACGCGGTAGCATAT---------------------------------------------------------
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---------------------ATCCTCATCCAACGACTGGACTTCAATTACCATTTAGGTGCTTTTTACTGC-TCTGTCT
AGTTACTTTACTTTAGCTCTTTCATTACTGCTATTTGGACTGTAATGGCTATAAAAGCCATTGATCCCAGCTGCCCTAGG
TATCAAGTTGCAATCGGGTTGTAACCCCTAGCAGGAAGAGAGATTAACACTAGGACAAGGCAGCCGATTATTTGGGTTAC
ATGTCAGGTTGTAACCGACTAGCAGGAAGAGAGATTAACACTAGGGCAAGTCAC
>chr4B_1
GAAATTTTTAATAAAAATAGTGTTCATAGTTTTTTTAATAATAA------ATAAAAAGAAAGTTAATTGACTGCCTAAGG
CGGGCCGAAGTC-GACTCATTGCCGGTTGCCTCGTGGCCCAGCTATTT--TCGTTACGCACAGGGCCGAACCGTCAAAAG
AAAAAAAATGATGGGTCGGTACGGTGCTATTGGGTGCCGCTGCT------------------------AACTGGCGCTGC
CGCATAACCC-------------GCCACGGCCAACGCCCCCACACCGCCA------------CGCCAGCCAGCAAGAGGG
TGACCGGCGTCGAGCAGGTCCCGGACGGCGGCACCGCGTCGTGCAAGCCGGCGACCGCGAGTGGACTAGCAGCGAGGAGC
GGCCGCCGGATCGTGGGGCTCTGCGGACCGC---------------ACGGCAGCAGATTGCCCCCTTTAAGACATCAATC
CGAGCTTTCTCTTTTGGTCAATTTCAGTGCCAGGTTTGTTGTGTCTCCCA----TCTCCTATTGTATAATATACTTGGTG
AAATTTGATTTATCCGGTATGAACTGCATATGTCTCACCATACCTTACATCGTTAGTCCTGTGAAATTATAAA---TACG
GCACTAATTTTATTGGCCATATGACCGCTTGCTAATCGAAAACTTCATCTTCTTTGCATAGTCATGTTTTCTCCTGAATC
CCAATTGAATGGGTATCTACAGCATGTT-TGTGTTTTTATCTGTTTATCAATCTCAAATCATATTCGTGGGTATCTCCAA
GACTCAGATTAGCTGTAATGGCAAATTATATCCTCTTTCATTCACACTTGTAAA-ACAAGCCTTTAACAGCAGTGGTGTG
GAGGAATTTTGCACATGGTGGCATTTTGAACTACGGGTATGTTTGAATGCTTTCTTTACATAAGAAAACCTGTTCTATGA
TTGTTATGCACTTGTACATTTGATTACACAGCGTGCACCTGATAATCTTAGCTTGATTGTGGTGATTCTTATTAGTTAAT
TCAGGTAACCCTAGGAGTACGGAGTACCCATGTACTAGTAATACTAATTGCTGTGGAGATATTCAGTATTGACTGTCTAA
TGGGGCTAGTCTAATTAATTGGGCGTGGAATATATATCTCTACAAACATACAT-ATTTTCATGTTTGTTTTTGTGTATAT
TGATGTATCACAAGCATGACACTCAAGTATCGTACTAGCTATTTACTGTTCAAAATAGTACTGGTACTGGTTTTCGTCCA
TCTCTGGATCCTCCCCTTTTAGTAAATTTACAGTATGTGGAGGACAGCTTCTAGCTTGATTTGAAATAA-TT-CTAATCA
GCCAAATAATTTGCAGGGAGCAGTACAAAGTTTTT-CTTCTGTCAAGAGGGGTGGGTGTTCTCGCATTTCCTCAAGCA--
-GAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAACATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCTTTAGCAAAAAATGTGCCCTAACGA-TTTAGTTGA--TTATATAACATAGAAATGATATGCAGGCATTTGGACAAGCA
GAATCATGCCTTAATGGGAACATACCGAGCAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAAATACTACTAGA
CTTTTATATTAAGAAGGAATCTCAGGGGTATTTCTTTAGTAATCAATTGCTGTCA-----TTTTATATAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTTCCAAAGGTACATTGTTGG---TGCTGCTGT
TCTGAATTTCGTT-GTTGTAGTTCTTGAGCTTAGCATCACACTTACCATTAAACCAACTGTAACTATATATATCTATACG
GTAAAATAGAGGGCTCAGCCAATTGTGCAGATTTACTAATAACTGAAATATACCATGCAGAGAATAAATGATA-----AG
TTCATAAAAGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGTCATGCTGCTAAGACTTTCATGTTATTCCTAAATG
GTAACAGTTACTTGTTTCCCTATACTGATTAAGCCT--TTTTTTATTTTAAGTTGGACAAATAAC---------------
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----------------------------------------------------------------TAGCAGAATAACATTC
TTTGGTAATATGTCTCGTCTAA-AAAGTAGAATCAATTGTTACTGAACATCAAGTGATGTAACTGAGGGTACAGTAATTC
TTAACTTG------------------------------------------------------------------------
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>chr4D_228
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----------------------------------------------------------------------CTGCCGCTGC
CGCATCAGAGCCGCCACGCCACGGCCACGGCCAACGCCCCA------CACCGCCACGCCGCGCGCGAGCCAGCAAGAGGG
CGACCGGCGTCGAGCAGGCCCCGGACGGTGGCACCGCGTCGTGCGAGCCGGCGACCGCGAGTGGACTAGCAGCGAGGAGC
GGCCGCCGGATCGCGGGGCTCTGCGGACCGCACGGCGCGGACGGCGACGGCAGCAGATTGCCCCCTTTAAGACATCAATC
CGAGCTTTCTCTTTTGGTCAATTTCAGTGCCAGGTTTGTTGTGTCTTCTGTCTCTCTCCTATTG--TAATATACTTGGTG
AAATTTGATTTATCTGGTATGAACTGCGTATGCCTCACCATACCTTACATCGTTAGTCATGTGAAATTATAAATACTACG
GCACTAATTTTATTGGCCATATGACCACTTGCTAATCGAAAACTCCATCTTCTTTGCATACTCATGTTTTCTCCTGAATC
CCAATTGAATGGGTGTCTACAGCATGTTATGTGTTTTTATCTGTTTATCAATCTCAAATCATATTTGTGGGTATCCCCAA
GACTCAGATTAGCTGTAATGGCAAATTATATCCTTTTTCATGCACACTTATAAACACAAGCCTTTAACAGCAATGGTGTG
GAGGAATTTTGCACATGGTGGCACTTTGAACTATGGGTATGTTTGAATGCATTCTTTACATAAAAAAACTTGCTCTCTGC
TTGTTAGGCACTTGT-----------------------------------------------------------------
---------------------------------ACTAGTACTACTAGTTGCTGTGGAGATATTCAGTATTGACTGTCTAA
TGGGGCTAGTCTAATTAATTGGGCGTGGAATATATATCTCTACAAGCGTACATAATTTTCATGTTTGTTTTTGTGTATAT
TGATGTATCACAAGCATGAGAATCAAGTATCGTACTAGCTATTTACTGTTCAAAATAGTACTGGTACTGGTTTTCGTCTA
TTTCTGGATCCTCCCCTTTTAGTAAATTTACAATATGTGGAGGACAGCTTCTAGCTTGATTTGAAATAA-TTTCTAATCA
GCCAAATAATTTGCAGGGAGCAGTACAAGGTTTTT-CTTCTGTCAAGAGGGGTGGGTGTTCTCGCATTTCCTCAAGCAGA
GGAGAAGCAGTATAAAGTTGTTTAGTGATAATGGAACCAAAGCATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCTTTAGCAACGAATGTGCCCTAACGATTTCAGTTGA--TTATATAACATAGAAATGATCTGCAGGCATTTGGACAAGCA
AAGTCATGCCTTAATGGAAACATACCGAGCAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAA-TACTACTAGA
ATTTTATATTAAGAAGGAATCTCAGGGGTATTTCTTTAGTACTCAATTGCTGTCA-----TTTTATATAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTTCCAAAGGTACATTGTTGG---TGCTGCTGT
TCTGAATTTCG-CCGTTGTAGTTGTTGAGCTTAGCATCACACTTACCATTAAACCAACTGTAACTATATATATCTATACG
GTAAAATAGAGGGCTCAGCCAACAGTGCAGATTTACTAATAACTGAAATATAGCATGCAGAAAATAAATGATA-----AC
TTCATAAGTGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGTCATGCTGCTAAGACTTTCCTGTTATTCTTAAATG
GTAACAGCTACTTGTTTCCATATACTGATTATTAAGCCTTTTTTATTTTAAGTTGGACAAATAAC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TAGTAGAATAACATTC
TTTGGTAATATGTCTCGTCTAA----GTAGAATCAATTGTTATTGAACCTCAAGTGATGTAACTGAGGATACAGTAATTC
TTAACTTGAATTGCTACCACTCATTTTTTGGGTCTTGCATTTTTTATTATTCAAACAA----------------------
--------------TTTGGCATCCATGTCTAATAAGACTAAAGAA------ATGCTGATTGAGCTAGCATTATTCATACA
AGTAGCGT--------------------------TTTT-CTAGAAACCACTTTAAATGTAAAGTTGAGCTATTCTCAATC
CTCCCCCGCAAAAAAAAAAGAGCTAT------------------------------------------------------
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----------------------------------------------------CAATCCTATGTGCTCATACCTGTGTATG
TGTTGACACTTCAAGAGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTATGGTTTCATGCATTCATGA-
------------------------------ACTTAGGTCATAAAAGAAACGCTTATTTAGTCCATTTTTCTGTCTTAGGC
ACTTGAAACGTAAGACAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCCCAATAATTGATGCAGCACA
AGGAAAAAAGGCAGCTGGAGAAAGCAGGGGAATCAAGCCAGGAAAACGAAGAACAAGAACCATAGAATGTTAACCGTGAA
TCTGCAATATATGATGTTCCATGGGGAT-----------------GCAACCGATCTTCGGTATCCACTCCAATGGATATT
A--CTGTAGTGAAA--TTTTTGTCTCAGTTCCAGCAGTTA----GTTTCCCTGTAATTTTCCAAACTGCACAACGGAACC
TTGAATCTGGCTACTGTTCTGTGAGGAATTTTGAGATGGATTTCG-AACCTTGTTTGTTCCTAGACGCTTTGGAAAGCTT
GGGG-CATGCATGACTAGCACATGAATTTTATGAATCTTGAATGTGACTACTGTTCAAA-------CTTGTCAGTGAGGA
ATGGGCAGCTGACTCTAGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAATCTTGTGTTTTGAGATGGGTTTCCTGT
CGTGCTACTTGTTTGTTCCTGGTCGCTTTGGAAAACCTGGGGCATAACTAGCACATGATTTTTGTGAAGTTAGTAGATTC
TTGGACAGTGGACGCAATATGAAATGTTTAACAGGCCA-GATAATTTTCATCATTGCTAATATATTTTCCATTCCCTTTG
CTTGGAGCAGGCGACACGACAC------TG---ACTACTCTCCATTGCAACGCTGGATGCATTCAGTGTCCATTGGATAG
TGGAACACAGTTCTCTGGTAGTCTATGCA---------------------------------------------------
------------------------------------------------------TAATCTTTCAAGCTTCAGCACGGTCA
GTGTATGGATGGAATTACCTGATGATGCATGTTAGCATTCTGACGAAGCAAGCTAAAAGCACATGTGTTATCGTAGCTAC
AATCACAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGACCTCGGCCTCTGAAATGAT-CAA-GTGTTGATCC
CTGTTAGATATGCGGTAGCATATGATCAGGAACAGTTGTGTGGGTTTCT--CTCAGACCTGCATCTACACTCGGATGATC
TTCTTTAGTTAGGTGTTCACTCTGATCTTGATCCAGCGACCCCCTGTCATTCCTGTGAACCAGTATGTAGATAGTCGAGA
AGATGACCTGGGGGACGCAAGATCTTCATCTAACGACG-----------------------CCTTTTACTGTTTCTGTCT
AGTTACTTTACTTTAGCTCTTTTATTACTGCTATTTGGACTGTAATGGCTATAAAAGCCATTGATCCCAGCTGCCCTATG
TATCAAGTTGTAATCGGGTTGTAACCCTAGC-------------------------------------------------
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>chr3A_850
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-----------------------------------TGTGGAGGACAGCTTCTAGCTTGATTTGAAAGAA-ATTCTAATCA
GTCAAATAATTTGCAGGGAGA-GTATAGAGTTTTT-CTTCTGTCAAGAGGGGTGGGCGTTCACACATTTCCTCAAGTAGA
GAAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAGCATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCTTTAGCAACAAATGAGCCCTAAAGATTTCAATT-ATTTTATATAACATAGAAATGATCTGCAGGCATTTGGACAAGCA
AAATCATGCCCTAATGGAAACATACCGAGCAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAGATACTACTAAG
CTTTTATGTTAAGAAGGAATCTCAGGGG-ATTTTTTCAGTAATCAGTTGCTGTCA-----TTTTATATAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTTCCAAAGGTACATTGTTGT---TGCTGCTGT
TCTGAATTTGGACCGTT----------------GCATCACATTTACCATTAAACCAACTGTAGCTATATATATCTATAAG
GTAAAATAGAGGGCCCAGCCAACAGTTCAGATTTACTAATAACTGAAATATACAGTGCAGAAAATAAATGATTAATTAAG
TTCTTAAGAGAATGAGGAATTTGA-TTTTAGGAGGAAATAACCTGTGATACTGCCAAGATTTGCCTGGTATTTCTAAATG
GTAATCCTTACTTGTTTCTCTATACCGATTAAGCCT--TTTCAT-TTTAAAGTTGGACAAATAAC---------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TAGTAGAATAACATTC
TTTGGTAATATGGCTCGTCTAATAAAGTAGAATCAATTGTTACTGAACAATAAGTGATATAACTGAGGATACAGTAATTC
TTAACTTGAAGTGCTAGCAGTCATTTTTTGGGGTTTGCATTTTTGATTATTCAAACAAATTTTGGGGGATTGCATTTTTT
TATTATTCAAACAATTAGGCATTCACCTC-TAAGT---TAAAGAG------ATGCTGATTGAACTAGCATATTCTCACGC
AGCTTTTGTACCACGGGTTGAAGTAAAAGTAGCG-TTT-TTAGAAGCCGTTATAAATGTAAAGTTGAGCTAATCTCAAAC
TGTTATGGCGCTGCTAGAAGGAGGGCGCGAGAGGGCCGGCCGGGGGCCTTTTGCCCACGGCCGGGCAAGATGGAAGGGAT
TTCCTTCTTAATTCTTGCTTGATTAGATTGATACATCTCCTCTCTTTATGTAGAGAGGTTTACTTGACTCCCAAGCAAGG
CTTACTTGACCCCTAAGAAAGCGACCCTTATCTCTAATTAACCCTAAGACTAACGGGCTATAGACCCAAAGTGGTCGGAC
CCTTCCCTGGACCCTGCGCAAGCGGGAGCTACATGCACCAGGTTGCCCTTTTTACTAACGGGCTATACCGCCAGCCCAGG
CCATTAGGCCCATTACGTACTCTAACACTACACCCCACCTGGACATGCAGCTTGTCCTCAAGCTGCAGCCTAACCAACTT
ATAACCATGACTCGAGGCAACACAAACCTAACACCTAAAAACAAGCCTTTTACATCTTGGCTTGTTTTATTACTCTCAAC
CTGAAATGGACTGGGATGATTTATTTTGGACCTCTTAACAAAAAGTGGATACCATCCGCACGTCGGACGTGCACGTGTAC
AGCCACCTGGATCCCATGGACACCATCTGGACAAAAGCAGTGCATGTGTATGGCCACCTGGAAGTGGTCGCAAGAGCGAC
CAGCAGAGGCGCCCTCGCGGCGGCCGGCGGCGGAATGCAGTGGTGCTACACGGTGCGCTCTTGTCGGTGACACCATGCCT
TCTCCCCGCCGGATGGCTGTTGGTCGGCACCGCACATAGAAGAGTGGAGGGTTGTCGATGGACAATGGCGAGGAGGGGTG
CGCCTCCCCAACCGCCGATGTCGCAGACTTTGAGGGCGTTGTCCGTGGGGAAAACAGCATGCCCAAGATCCCCGACGCAG
CGGACGAGATCGAGGTCCTTTGCGCAGCGAAGCGCAACTGGGAGGAGCGGCAGCTGCAGACCACGCAACTCCCGCACACG
CCGACGCGCTAGGAGGCTGCGTGCAGCAGCCTGCAGCCTCACCGTCGCCGACACGTGGCGGGTAGTGATCCAAGCTGGAA
GCGGTGACGGCGACGGCGGAAGCTTGATCTGCTGGATGGGGACGCCCTGGGGAAGCGGTGATGGCGACGGCGGGAACTTG
ATCTGGTGGATCGGGACTCCCGTCGGCGCGGTCGATGCGGGGCTGGAGCTGACCGGTGATGGCTGCTGTAGTTGCAGCGG
CTGCTGCGGCGGAGCGCCGGGCGCGGCAGAGGTCGCCAGGAGCGGTGGCTGCCACTGCAGCCAGGGCGGGGCGGTGGATG
GCAGCTGCTGCAGCGGCCTGATGAGCGCGGCGGAGGCCACCTGGTGCGGCGGCTGCCACGGCAGCCAGGACGGGGCGGTG
GTGGCGGTGGATGGCAGTTGCAGCGGCTGCTGCAGCAGCCCGACGAACGCGGCGGAGGCCGCCTGGTGCGGCGGCTGCCA
CGGCAGCCAGGACGGGGCGATGGATGGCAGCTGCAGCGGCTGCTGCAGCAGCCCGGCGAGCGCGGCGGGGGCGGCTCGGT
GTGGCGGCAGCCACGGCGGCGCGGTGGCGGTGATGGGCGGCGCAGCCGGGTGCGGCCCATAGGACCCGGCCAAGAACAAA
TGGATCTCCTGGACCGCCTGTGTTAGGTCCCGCAACGCCTCGGACACCTCCGGGGTGAGGACGACGGGGGCGGGCGCGAC
GGAGGATCCCGGTGCGGGCAGGAGCGGGGCGACGGTCGTGACCGGCAGCGGAAGAGACGGGTTGGGCGGCGGTGAAGACA
TGATCGAACCGAAGCTAGCTGATACCAAATTGTTATGGCGCTGCTAGAAGGAGGGCGCGAGAGGGCCGGCCGGGGGCCTT
TTGCCCACGGCCGAGCAAGATGGAAGGGATTTCCTTCTTAATTCTTGCTTGATTAGATTGATACATCTCCTCTCTTTATG
TAGAGAGGTTTACTTGACTCCCAAGCAAGGCTTACTTGAACCCTAGGAAAGCGACCCTTATCTCTAATTAACCCTAAGAC
TAACGGGCTATACCGCCAGCCCAGGCCATTAGGCCCATTACGTACTCTAACACAAACCTATGTGCACATACGTGTG----
--TTGACACTTCAAGTGAGAATCACTGATTCCTAAGAAAAGGCT--ACTTTCTCCACTTACGGTTTCATGCATTCATGCA
CTTTTTTTTGAAACTTTCATGCATTCATGCACTTAGGCCATAAATGAAACACTTATTTAGTCCATTTGTCTGTCTTAGGC
ACTTGAAACATAAGACAATCAACTTCATTTCATGCTGCTCTGTCTCCTTTAACCAATCTCTCAATAATTGATGCAGCACA
AGGAAAAAAGGCAGCCGGAGAGAGCAGGGGAATCAAGCCAGGAAAGCGAAGAACAGGAACCATAGAATGTCAACCGTGAA
TCTGCAATATATGATGTTACGTGGGGATGCAAGTTTGGTTGAATAGCAACCGATCTTAGGTATCCACTCCAATGGATAT-
A--CTGTAGTGAATTTTTTTTGTCTCGGTTCCAGCAGTTA----GTTTCCCTGTAATTTTCCAAACTGCACAACGGAA--
--------------------------AATTTTGAGATGGGCTTCAAAGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTT
GGGG-CATGC---------------ATTTTGTGGATCTTGAAAGTGACCACCGTCCAAA-------CTTGTCTGTGAGGA
ATGGGCAGCTGA--CTAGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAACCTTGTGTTTTGAGATTGGTTTCCTGT
CGTGCTACTTGTTTGTTCCTGTTCACTTTGGAAAACCTGGGGCATGACTAGCACATGATTTTTGTGAAGTTAGTAGTTTC
TTGGACAGTGGACGCAATATGAAATGTTTAACAGGC-A-GATAATTTTCATCATTGCTAACATATTTTCCATTCCCTT-A
CTTGGAGCAGGCGAGACGATAT------TGACTA---CTCTGCATTGCAACGCTGGATGCATTCAGTGTCCATTGGGTAG
TGGAACGCAGTTCTCTGGTA------------------------------------------------------------
--------------------------------------------------------ATCTTTCAAGCTTCAGCACGGTCA
GTGTATGGATGGAATTACCTACTGATGCATGTTAGCATCCTGACAAAGCAAACTAACAGAACATGTGTTATCGTAGCTAC
AATCACAGGTGTGCCCATAATGGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTGAAATGAT-C-------------
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>chr3B_850
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-----------------------------------TGTGGAGGACAGCTTCTAGCTCGATTTGTAAGAA-ATTCTAATCA
GCCAAATAATTTGCAGGGACG-GTATAAAGTTTTT-CTTCTGTCAAGAGGGGTGTGTGTTCGCACATTTCCTCGAGTAGA
GAAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAGCATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCCTTAGCAACAAATGAGCCCTAAAGATTTCAATT-A--TTATATAACATAGAAATGATTTGCAGGCATTTGGACAAGCA
AAATCATGCCCTAATGGAAACATACCGAGCAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAGATACTACTAAG
CTTTTATGTTAAGAAGGAATCTCAGGGGCATGTCTTCAGTAATCAATTGCTGTCG------TTTATATAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTCCCAAAGGTACATTGTTGG---TGCTGCTCT
TCTGAATTTGGACCGTTGGAGCTGTTGAGCTTAGCATCACATTTACCATTAAACCAACTGTAACTATATATATCTATACG
GTAAAATAGAGGGCCCAGCCAACAGTTC-----TACTAATAACTGAAATATACAGTACAGAAAATAAATGATAAATTAAA
TTCGTAAGAGAGTGAGGAATTTGA-TTTTAGGAGGAAATAACCTGTGATACTGCCAAGACTTTCCTGGTATTTCTAAATG
GTAACCCTTACTTGTTTCTCTATACTGATTAAGCCC--TTTTAT-TTTAAAGTTGGAGAAATAACTACTCCCTCCGTTCC
AAATATAAGTCTTTGTAGAGATTTCACTATGGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAAATGCATCTA
CATACATCTGTATGTGGTTCATAGTAGAATCTCTCCAAAGACTTATATTTAGGAACGGAGGGAGTAGTAGAATAGCATTC
TTTGGTAATATGGCTTGTCTAATAAAGTAGAATCAATTGTTACTGAACAATAAATGATATAACTGAGGATACAGTAATTC
TTAACTTGAATTGGTAGCAGTAATTTTTTGGGGTTTGCATTTTTTATTATTCAAACAT----------------------
--------------TTGTTTGGGGTTTGCATTTTTTATTATTCAAACAATTATGCTGACTGAACTAGCATATTCTCACGC
AGCTTTTGTACTACGAGTTGAAGTAAAAGTAGCG-TTTTTTAGAAGCCGTTATAAATGTAAAGTTGAGCTAATCTCAAAC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------CTATGTGCACATACGTGTG----
--TTGACACTTCAAGTGAGAATCATTGATTCCTAAGAGAAGCCT--ACTTTCTA--------------------------
---------------------------------TAAGCCATAAATGAAGCGCTTATTTAGTCCATTTTCCTGTCTTAGGC
ACTTGAAACATAAGACAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAATCAATCTCTCAATAATTGATGCAGCACA
AGGAAAAAAGGCAGCCGGAGAGAGCAGGGGAATCAAGCGAGGAAAACGAAGAACAGGAACCATAGAATGTCAACCACGAA
TCTGCAATAGATGATGTTACATGGGGATGCAAGTTTGGCTGAATAGCAACCGATCTTAGGTATCCACTCCAATGGATAT-
A--CTGTAGTGAAA--ATTTTGTCTCGGTTCCAGCAGTTT----GTTACCCTGTAATTTTCCAAACTGCACAATGGGATC
TTGAATCTGGCTATTGTTCTGTGAGGAATTTCGAGACGGGTTTCAAAGCCTTGTTTGTCCCTAGACGCTTTGGAAAGCTT
GGGG-AAAGCATGACTAGCACATGAATTTTGTGAATCTTGAAAGTGACCACCGTCCAAA-------CTTGTCAGTGAGGA
ATGGGCAGCTGA--CTAGTCTGTTTTACCTTACGCACATGTTGTGTATGAGAATCTTGTGTTTTGAGATTGGTTTCCTGT
CGTGCTACTTGTTTGTTCATGGTCGCTTTGGAAAACCTGGGGCATGACTAGCACATGATTTTTGTGAAGTTAGTAGATTC
TTGGACAGTGGACGCAATGC---------------C-A-GATAATTTTCATCATTGCTAA--TATTTTCCATTCCCTTTA
CTTGGAGCAGGCGAGACGATGC------TG---A---CTATGCATTGCAATGCTGGATGCATTCAGTGTCCATTGAGTAG
TGGAACACAGTTCTCTGG--------------------------------------------------------------
------------------------------------------------------TAATCTTTCAAGCTTCAGCACGGTCA
GTGTATGGATGGAATTACCTGCTGATGCATGTTAGCATTCTGACAATGCAAAATAACGGCACATGTGTTATCGTAGCTAC
AATCACAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGTTCGGCCTCTGAAATGATGCAA-GTGTTGATCC
ATGTCAGATACACAGTAGCATATGATC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr3D_850
--------------------------------------------------------------------------------
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-----------------------------------TGTGGAGGACAGCTTCTAGCTTGATTTGTAAGAA-ATTCTAATCA
GCCAAATAATTTGCAGGGAGG-GTATAAAGTTTTTTCTTCTGTCAAGAGGGGTGGGTGTTCGCGCATTTCCTCAAGTAGA
GAAGAAGCAGTATAAAGTTGTTTGGTGATAATGGAACCAAAGCATTCTGCTGAAATGTCCAGGTGCAACATCTTGACTAA
CCTTTAGCAACAAATGAGCCCTAAAGATTTCAATT-A--TTATATAACATAGAAATGATTTGCAGGCATTTGGACAAGCA
AAATCATGCCCTAATGGAAACATACCGAGCAATGTCCCATGAGTTGCATAAACTACAGGTGAGCCTCAGATACTACTAAG
CTTTTATGTTAAGAAGGAATCTCAGGGGTATTTCTTTAGTAATCAATTGCTGTCA-----TTTTATGTAGGTTGAAGAGG
AAACAATCATGCGCAAGTTGTATGAGCTGATGTCTGCAGAAGGGCTTCTTCCAAAGGTACATTGTTGTTGCTGCTGCTGT
TCTGAATTTGGACCGTTGGAGCTGTTGAGCT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------AGCATATTCTCACGC
AGCTTTTGTACCACGGGTTGAAGTAAAAGTAGCG-TTTTTTAGAAGCCGTTATAAATGGAAAGTTGAGCTAATCTCAAAT
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---------------------------------------------------------CTATGTGCACATACGTGTG----
--TTGACACTTCAAGTGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTACAGTTTCATGCATTCATGA-
------------------------------ACTTAGGCCATAAATGAAATGCTTACTTAGTCCATTTTTCTGTCTTAGGC
ACTTGAAACATAAGACAATCAACTTCATTTCATGCTGCTCTGCCTCCTTTAACCAATCTCTCAATAATTGATGCAGCACA
AGGAAAAAAGGGAGCCTGAGAGAGCAGGGGAATCAAGCCAGGAAAACGAAGAACGGGAACCATAGAATGTTAACCGTGAA
TCTGCAATATATGATGTTACATGGGGATGCAAGTTTGGCTGAATAGCAACCGATCTTAGGCATCCACTCCAATGGATAT-
A--CTGTAGTGAAA--TTTTTGTCTCAGTTCCAGCAGTTAGTTAGTTTCCCTGTAATTTTCCAAACGGCACAATGGAATC
TTGAATCTGGCTATTGTTCTGTGAGGAATTTTGGGATGGGTTTCAAAGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTT
GGGG-CATGCATGACTAGCACATGAATTTTGTGAATCTTGAAAGTGACCACCGTCCAAA-------CTTGTCAGTGAGGA
ATGGGCAGCTGA--CTAGTCTGTTTTACCTTT-GCACATGTTGTGCATGATAATCTTGTGTTTTGAGATTGGTTTCCTGT
CGTGCTACTTGTTTGTTCCTCGTCGCTTTGGAAAACCTGGGGCATGACTAGCACATGATTTTTTTGAAGTTAGTAGATTC
TTGGACAGTGGACGCAATATGAAATGTTGAACAGGC-AAGATAATTTTCATCATTGCTAATATATTTTCCATTCCCTTTA
CTTGGAGCAGGCGAGACGATCACGATACTGACTA---CTCTGCATTGCAACGCTGGACGCATTCAGTGTCCATTGGGTAG
TGGAACACAGTTCTCTGG--------------------------------------------------------------
------------------------------------------------------TAATCTTTCAAGCTTCAGCACGGTCA
GTGTATGGATGGAATTACCTGCTGATGCATGTTAGCATTATGACAAAGTAAACTAACAGCACATGTGTTATCGTAGCTAC
AATAATAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTGAAATGATCCAA-GTGTTGATCC
ATGTCAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr4B_1975
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--------------------------------------------------------------------------TG----
--TTGACAC-TCAAGAGAGAATCACTGATTCCTAAGAAAAGCCT--ACTTTCTCCACTTATGGTTTCATGCACTCATGA-
------------------------------ACTTACGCCATAAACGAAACGCTTATGTAGTCCATTTTTCTGTCTTAGGC
ACTTGAAACCTAAGACAATCAACTTCATTTCATGCTGCTCTGCCTCCTCTAACCAATTTCCCAATAATTGATGCAGCACA
AGGAAAAAGGGCAGCCGGAGAAAGCAGGGGAATCAAGCCAGGAAAACGAAGAACAGGAACCAT--AATGTTAACCGTGAA
TCTGCAATGTATGATGTTACATGGG-----------------------------------TATCCACTCTAATGGATAT-
A--CTGCATAGAAA--A-TTTGTCTCAGTTCCAACAGTTAAGTGTG--CCGTATAAATTTCCAAACTACACAATGGAATC
TTGAATCTGGCCATTGTTCTGTGAGGAATTTTGAGATGGGCTTCG-AGCCTTGTTTGTTCCTAGACGCTTTGGAAAGCTT
GGGG-CATGCACGACTAGCACATGAATTTTGTGAATCTTGAATGTGACTACCGTCCAAA-------CTTGTCAGTGAGCA
ATGGACAGCTGACTCTAGTCTGTTTTACCTTACGCACATGCTGTGTATGAGAATCTTGTGTTTTGAGATGGGTTTCCTGT
CGTGCTACTTGTTTGTTCCTGGTCGCTGTGGAAAACCTGGGGCATGACTAGCACATGACTTTTGTGAAGTTAGTAGATTC
TTGGACAGTGGACGCAATATGAAATGCTTAATAGGC-CAGATAATTTTCATCGTTGCTAATATATTTTGCATTCCCTTTA
CTTGGAGCAGCCGAGACGATACCGAT------TA---CTCTGCATTGCAACGCTGGATGCATTCAGTGTCCATTGGTTAG
TGGAACACAGTTCTTTGGTACTCCCTCCGTTCCGAATTACTTGTCGCATGTATGGTTGTATCTAGATGTATTTTAATTCT
AGATACATCCATTTCTGCGACAAGTAATTTGGAACGGAGGGAGTAGTTCTCTGCTAATCTTTCAAGCTTCAGCACGGTCA
GTGTATGGATGGAATTACCTGCTGATGCATGTTAGCATTCTGACAAAGCAAACTAACAGCACATGTGTTATCGTAGCTAC
AATCACAGGTGTGCCCATAATCGGGTCACAGCCACCATAACTTTGAGCTCGGCCTCTCAAATGATCCAA-GTGCTGATCC
ATGTCAGGTACACAGTAGCATATGATCAGGAACAGTTGTGTGGGTGTCACGCTCAGACCTGCATCTACACTCTGAAGACC
TTCTTCAGTTAGGTGTTCACTCTAATCTTGATCTAGGGACTCGCTGTCATTCCGGTGAACTGGTATGTAGATAGTAGAGA
AGATGGCCTGGGGGACGCAAGA---TCATCTAACGGCTGGAGTTCAATTACCTTTTAGGCACCTTTTACTGTTTCTGTCT
AGTTACTTTACTTTAGCTCTTTTATTACTGCTATTTGGACTATAATGGCTATAAAAGCCATTGATCCCAGCTGCCCTATG
TATCAAGTTGTAATCGGGTTGTAACCCTAGC-------------------------------------------------
------------------------------------------------------
>SNPs
--------------------S-----------------------SSSSSS-------------------S--------S-
------------S--------------------------------SSSSS-----------------S-----------S
--SSSSS-----S--------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSS------------
------S-------------------------------------------------------------------------
---------------------------------------------------------S----------------------
-------------------------------S------------------------------------------------
-----S----------S---------------------------------------------------------------
-----------------------------------------------------S--S-----------------------
------------------------S-----------------S---S--------------S------------------
-----------------------S------------------------------S-S-----------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-S----------
---S-----------------------------------------------------------S----------------
--------S------------------S----------------------------------------------------
---------------------S---S------------------------------------------------------
-----------------------------S----------------------------------------S---------
---------------S--------S------------------------------SSSSS--------------------
------------------------------------------------------------S-------------------
----S---------------------------------------------------------------------------
------------------------------S-------------------S-----------------------------
----------------S-------S--------------S-----------------------S----------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---------S--------S---------------------------
---------------S----------------------------------------------------------------
---------S----------------------------------------------------------------------
--------S-----------------------SS----------------------------------------------
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-------------------------------------------------------------------------S------
-----S--------------S-----------------------SS-------------------------------S--
---------------------------------S------------------------------S---------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
------S-------------------------------------------S------S----------------------
-SS-----------------------------------------------------------------------SSS--S
-----------------------S---S----------------------------------------------------
S---S--------------------------S------------------S--------SSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----------------------------------------------S--------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------S-------------------------------------SS--------------
-------------------------------------------------------------------S-S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----S----------S----------S------SS-S--------S--------
----------------------S-------------------------------------------------------S-
----------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_160
--------------------------------------------------------------------------------
------------------------------------------------------------CAGGGCCAAACCGTCAAAAA
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>reverse_1845
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----CATTTGGACCGTTGGAGCTG--------------------------------------------------------
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>forward_1546
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------GCAACAAATGAGCCCGAACA------------------------------------------------------
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>reverse_4986
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-------------------------TGGGGAATCAAGCCAGGAAA-----------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>forward_1845
--------------------------------------------------------------------------------
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------------------------------------------------------------------GTTGGTGCTGCTGT
TCTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_6366
--------------------------------------------------------------------------------
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---------------------------------------------AACACTAGGACAAGGCAGCC---------------
------------------------------------------------------
