>input_sequence_56458
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---------------------ATGGTTTTAGATATGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTGCTA
TAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAACAC
CAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTCCTGCGGTCCTCA
GGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGAGAA
GAACGTCTTGAGTAAGCCCGCCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGTCATTGCTGGTGGTGGCTGCAATGTCC
TGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGGTACCACCACTCAAGTTCAATGAGATGGATGCTGCAGCCTCT
CTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTTATGAAGATTGCTATACAGAAGTTATGGACAGTTTTGCCCC
CAATGTGTCGAAGGATGTGAAGCTGAATGCTTTTGATCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAGGTT
GCAAGTGTTCAGCTTATGATATTTTCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATGTTGCCAAGGAAAAA
ACTTCGATCCCTAATATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGATCCC
AAATGTTGAGCTGAAGGAAAGAAGTTTGATCGCCAATGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTGAGG
AGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA-----------------------
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----------------------------------------------------------------AGCAAAGAACTGACAA
TTCAGTTGAGATGAAGCGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCCGAA
AGCCCTGATTCTGTTGCGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCAACTTCCAGG
TCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGCGTTCACTGA----
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>chr5D_1_TraesCS5D01G086200
GACGATCCCGTCCTCTCCGGGGAGCTCCTCGATCTGCAGCTGTTCGAGGTGGGTTCCCGAGCTCAGTTGCCTCGCTTACT
GGTTCTGGACTGATCGGCGTCGCTGGCTGGCGAA------TCTCTCCGATTCCTCACTGAATTTGATCGAATGGCGTCTC
TGGTTTCGGAATTCGGGCGGTTTAGTGCTTGCTCCTGGATTAATCGCTTGTGTTTGCTTCTGCTGCGTTCTAATCCGTTT
CCTGCAATCTCGTTTCAGCGATCAAGCCCTTCCCTGCATTCCCTGAGCAATCCGAAACCGCGCCGCCCTCCTCTCACGCG
GGTTCACGAGACAGGAACTCGAGCCTTCAGGTAATAAA-TCCCATTCCATCCCACGAATTTCTGA-----------CGCC
TTCTTCCGTTTCCTGCAATGTGTGATCAAATGC--CGTCTCCGTGTTTGTGTAAATGCTCCAAAGAAGCAACAACTTGTG
AGCTGAGCGTATCATTGT----GTGCTGAATGTGGCGTATCACTGTGTCCTTAGTTGCTGCGTAGTTAAAC---------
-------------------TTAAACCCCGTGATGATGTGAGAATTTTCACATGTTGTTGCAACTTGTCATTGCTGGCGCA
TGTTATTGTCTTCCCTC-AAACTATCACATCATGGCTGGTTGTTTCACAGTGCTTTT-AAAAAAGCAGCATCTTATAAAC
TATTTT-GCCCCACTAAAACCTACTTGTGCTTTTGATTAATCTGTCAGGGAAGACTTCAGTTCGGACTGTAGATTATGAT
TCAACTCCCCTGTTGTTTACAGACATGCGGTTTTTTTTTCCTGAATA-GTAGAGGCAAATTTATTGCTTCCTTATGCTTC
GGTAGTGGTGGTGGAGCAGTTCTGTAGTTTTTT--TCAGTTAGATGCGATAGTTTATTTTGATGCATATGGTGTAA---T
GTTCTAATGCACTTTGCCTTGCGCTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTCTGTGTT
CTGACTTGGTGCATCTTTGTAATGGTTTTAGATATGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTGCTA
TAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAACAC
CAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTCCTGCGGTCCTCA
GGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGAGAA
GAACGTCTTGAGTAAGCCCGCCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGTCATTGCTGGTGGTGGCTGCAATGTCC
TGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGGTACCACCACTCAAGTTCAATGAGATGGATGCTGCAGCCTCT
CTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTTATGAAGATTGCTATACAGAAGTTATGGACAGTTTTGCCCC
CAATGTGTCGAAGGATGTGAAGCTGAATGCTTTTGATCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAGGTT
GCAAGTGTTCAGCTTATGATATTTTCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATGTTGCCAAGGAAAAA
ACTTCGATCCCTAATATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGATCCC
AAATGTTGAGCTGAAGGAAAGAAGTTTGATCGCCAATGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTGAGG
AGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA-----------------------
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----------------------------------------------------------------AGCAAAGAACTGACAA
TTCAGTTGAGATGAAGCGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCCGAA
AGCCCTGATTCTGTTGCGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCAACTTCCAGG
TCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGCGTTCACTGAGCCA
ATGCCGATGCACACTGTTGTCTGAACTGCTACAGTCACTTCACTTTTGTGTATAGTCAATCAGCCTGATGGCAAAACTTC
CAATTTGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTGCTCTTTACCGGC-AAATTTTCGTGGCAGTAAA-GG
CCAAGGATCTTATGCAGTTGCTTGGTTGGTGCACAGTACAGCACCTTTGCTCAGTTGAATGCACAAGCATGAGATTGTGT
CATTCTAGCACTAACTAATGATCTGGAGTTGCCTAACTGCCGTATGCTTCCTCCTTGCACACATTTGTGTCTGTAAATGT
TCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCAGAG--TTTTTCCAATTTGTTACTGTATTTGTTTGTTCT
GTTGG-TTTTTGGATGTGGTAGC----AAGAAATAACTAATCACTGCTCTGATTGTCACTGTCGTGGCACTGTCAATGTC
ATGCATTATGGCATTGGTTT-TTGTGTTCA-----ATTGGTTTCTTGTGAATGAGGC-ATTCTGCTATGCTCCCTGGACT
GA--AAATCTGGATTTGCAGTTGTCTGTG-CCAAGTTTCCTTTATGTTGTTTGCTTGCATTTCCTATGTGGTTTGCTGCA
GTTTCTCCATCTTCCAC--TTTTTGGTGGTTTCTCGCTGAAACTC-TGCCTGTGTGCAGCTGATGGTAAGTACAGTGATT
CTGCCGTCCCT---------AATCTGGTTCTGGGTTCTGGTCGTG---------G-ATGCATGT----------------
-----------------------------------------------------------CTGATATTCCAGT-CCCA---
---GATAGA-----------------------------------------------------------------------
-------------------------------------------------------------CTAACTGTATTTGAATATT
TTCAAACACGGAGATCTTCCGCGATGGATTT-GTCAATGCGCACAGAGCCATTTCTTCCT------TCGCAAGAGTGTAG
AGCGTACTGCGGCATGTGTGATTTGGGATCCATTTCATGTT-TTTGTGATGTTCCAGTGTGTTAAGCTTAATGTATAAGT
CCGAACTAATTGAAGGGCTAGACAATCCACATGTATACTTCAACACCCCTTTCATGTGT
>chr5B_1
GAGGATCCCATCCTCTCCGGGGAGCTCCTCGATCTGGAGCTGTTCGAGGTGGGTTCCCGAGCTCAGTTGCATCGCTTACT
GGTTCTGGATTGAGCAGCGTCGCTGGTTCCCGAGCGCTGTTCTCTCCGATTCCTCACTGATTTTGATCGAATTGCGTCTC
TGGTTTTGCAATTCGGGTGGTTTAGTGTTTGCTCCTGGATTAATCGTCTGTGTTTGCTTCTGCTGCGTTCTAATCCGCTT
CCTGCAATCTCGTTTCAGCGATCAAGCCCTCCCTTGCATTCCCTGAGCAATCCGGAACCGCCCCGCCCTCCTCTCACACG
GGTTCACGAGACAGGAACTCGAGCCTCCAGGTAAAAAAATCCCATTCCATTCCACGTATTTCTGA-----------CGCC
TTCTTCCGTTTCCTATAATGCGTGATCAAATGC--CGTCTCCGTGTTTGTGCAAATGCTCCAAAGAAGCAACAACTTGTG
AGCTGAGCGTATCATTGTTCGTGTGCTCAATGTGGCGTATTGCTGTGTCCTTAGTTGCTTCGTAGTTAAAC---------
-------------------TTAAACCCCGTGATGATGTGAT----------TGTTGTTGCAGCTTGTCATTGCTGGCGCA
TGTTATTGTCTTCCCTC-AAACTATCACATGATGGCTGGTTGTTTCACAGTGC-TTT-CAAAAAGCAGCATCTTATAAAC
TATTTTCGCCCCACTAAAACCTTCCTGTGCTTTTGATTAATCTGTCAGGGAAGACTTCAGTTCGGGCTGTAGATTGTGAT
TCAACTCACCTGTTGTTTACAGACCTGCGGATTTTTT---CTGAATA-GTAGAGGCAAATTTATTGCTTCCTCATGCTTC
GGTAGTGGTGATGGAGCAGTTCTGTAGTTTTTTTTTCAGTTAGATGCAATAGTTTATGTCGATGCATATGGTGCAA---T
GTTCTAATGCACTTTGCCTTCTGCTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTTTGTGTT
CTGACTTAGTGCATCTTTGTAATGGTTTTAGATATGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTGCTA
TAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAACAC
CAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTGCTGCGGTTCTCA
GGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGAGAA
GAACGTCTTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGCCATTGCTGGTGGTGGCTGCAATGTCC
TGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGACACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCCTCT
CTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTTATGAAGATTGCTATACAGAAGTTATGGACAGTTTGCCCCC
CAATGTGTCAAAGGATGTGAAGCTGAATGCTTTTGATCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAGGTT
GCAAGTGTTCAGCTTATGATATTTGCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATGTTGCCAAGGAAAAA
ACTTCGATCCCTAATATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGAGAATGTGAGAAGGACAGCAGCTTGATCCC
CAATGTTGAGCTGAAGGAAAGAAGTTTGATCGCCAATGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTGAGG
AGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA-----------------------
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----------------------------------------------------------------AGCAAATAACTGACAA
TTCAGTTGAGATGAAGTGTGCTGATTTTTCAGCTGCAGTGAATGTCAAGAGGCACCGGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCATCATGGGTTCGCCGAA
AGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGGCACCAAGTTTCTTGATCTCCGACTTCCAGG
TCTCACGGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGAGCCA
ATGCCGATGCACACAGTCGTCCGAACTGCTACAGTCACTTCACTCTTGTGTATAGTCAATCAGCCTGATAGCAAAACATC
CAATTTGTCTATTTGTAAATAGTCACAAGCTTTGCACTGGTCCTTCTCTTTACCGGC-AAATTTTCCTGGCAGTAAA-GA
CCAAGGATCTTATGCAGTTGCTTGGTTGGTGCACAGTACATCACCTTTGCTCAGTTGAATGCACAAGCATGAGTTTGTGC
CATTCTAGCACTAACTAATGATCTGGAGTTGCCTAACCGCCGTATACTTTCTCCTTGCGCACATTTGTTTCTGTAAATGT
TCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCAGAA-TTTTTTTCAATTTGTTACTGTATTTGTTTGTTCT
GTTGGC-TTTTGGATGTGGTAGC----AAGAAATAAGTAATCACTGCTCTGATTGTCACTGTCGTGGCATGCGTTATGGG
C----TTATGGCATTGGTTT-TTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGCAATTCTGCTATGCTCCCTGGACT
GA--AAATCTGGATTTGCAGTTGTCTGTG-CAAAGTTTGCCTTTCCTTG----------------ATGTGGTTTGCTGCA
GTTTCTCTACCAAGA--------------------------------------GTGCAGCTGATGGTAAGTGCAGCGAAA
AAAAAAATTCAAAAAAAAAAAAATTGGTTCAGGTCATGGACTGCAC-----AGTG-ATGCATGT----------------
-----------------------------------------------------------CTGATGTTCCAGTTCCCA---
---GACAGA-----------------------------------------------------------------------
-------------------------------------------------------------CCAACTGTATTTGAATATT
TTCAAACACAGAGATCTTCCGCGATGGATTTTGTCAATGCGCACATAGCGTC--CTTC----------GCAAGAGTGTAG
AGCGTGCTGCGGCATGTGTGATTTGGGATCCATTTCATGTT-TTTCTGACGTTCCAGTGTGTTAAGCTTAATG-------
-----------------------------------------------------------
>chr5A_1
GACGATCCCATCCTCTCCGGGGAGCTCCTCGATCGGGAGCTGTTCGAGGTGGGTTCCCGAGCTCAGTTGCCTCGCTTACT
GGTGCTGGATTGATCGGCGTCGCTGGCTGGCGAA------TCTCTCCGATTCCTCACTGAATTTGATCGAATTGCGTCTC
TGGTTTCGGAATCCGGGCGGTTTAGTGCTTGCTCCTGGATTAGTCGTCTGTGTTTGCTTCCGCTGCGTTCTAATCCGGTT
CCTGCAATCTCGTTTCAGCGATCAAGCCCTCCCTTGCATTCCCTGAGCAATCCGAAACTGCACCCC------------CG
GGTTCACGAGACAGGAACTCGAGCCTCCAGGTAAAAAAATCCCATTCCATTTCACCAGTTTCTGATGTTATTACCGCGCG
TTCTTCCGTTTCCTGTAATGCCTGATCAAATGC--GGTCTCCGTGTTTGTGCAAATGCTCCAAAGGGGCAAGAAATTGTG
AGCTGAGCGTATCATTGTTTGTGTGCTGAATGTAGCGTATCACTGTGTCCTTAGTTAGTTACCGCGCTACATTGCTATGA
TTCAGATTCACAGTATTTGTTAAACCTCGTGATGGTGTGAGAATTT-CACATGTTGTTGCAACTTGTCATTGCTAGCGCA
TGTTATTGTCATCCCTC-AAACTATCACATCATGGCTGCTTGTTTCACAGTGC-TTTTAAAAAAGCAGCATCTTATAAAC
TATTTT-GCCCCCCTAAAACCTACTTGTGCTTCTGATTAATCTGTCAGGGAAGACTTCAGTTCGGGCTGTAGATTGTGAT
TCGACTCCCCTGTTGTTTACAGACCTGCGGATTTTTT---CTGATGTTGTAGAGGCAAATTTATTGCTTCCTTATTCTTC
AGTAGTGGTGGTGGAGCAGTTCTGTAGTTTTTT---CAGTTAGATGCAATAGTTCATTTTGATGCATATGCTGTAATAAT
GTTATAATGCACTTTGCCTTCCACTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTCTGTGTT
CTGACTTAGTGCATCTTTGCAATGGTTTTAGATATGGCACCACGAGGAAGATCTCCGAAGCATGTGTGCAACAAGTGCTA
TAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAACAC
CAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGATTTTGCTGTGGTTCTCA
GGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCATGGGGAGAA
GAACGTCCTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGCCATTGCTGGTGGTGGCTGCAATGTCC
TGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGGCACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCCTCT
CTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTAATGAAGATTGCTATACAGAAGTTATGGACAGTTTGCCCCC
CAATGTGTCGAAGGATGTGAAGCTGAATGCTTTTGGTCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAGGTT
GCAAGTGTTCATCTTATGATATTTGCTATGGGCAATGTGTTATGGACACCAACTTGATCCCCAATGTTGCCAAGGAAAAA
ACTTTGATCCCTAACATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGATCCC
CAATGTTGACAAGAAGGAAAGAAGTTTGATCGCCAATATTCCTGAGAAGGACAACACCTTGATCTCCATTGTTCTTGAGG
AGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA-----------------------
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----------------------------------------------------------------AGCAAAGAACTGACAA
TTCAGTTGAGATGAAGTGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCCGAA
AGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGGCGCCAAGTTTCTTGATCTCCGACTTCCAGG
TCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGAGCCA
ATGCCGATGCACACAGTCGTCTGAACTGCTACAGTCCCTTCACTTTTGTGTATAGTCAATCAGCCTGATAGCAAAACTTC
CAATTTGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTTCTCTTGACCGGC-AAATTTTCATGGCAGTAAA-GG
CCAAGGATCTTATGCAGTTGCTTGGTTGCTGCACAGTACAGCACCTTTGCTCAGTTGAATGCACAAGCATGAGATTGTGT
CATTC-AGCACTAACTAATGATCTGGAGTTGCCTAACTGCCATATACTTTCTCCTTGCACACATTTGTTTCTGTAAATGT
TCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCAGAATTTTTT--CAATTTGTTAATGTATTTGTTTGCTCT
GTTGG-TTTTTGGATGTGTTAGC----AATAAATAAATAATCACTGCTCTGATTGTCACTGCCGTGGCACTGTCAACGTC
ATGCATTATGGCATTGGTTT-TTGTGTTCAGTTCAACTGGTTTCTTGTGAACGAGGC-ATTCTGCTATGCTCCCTGGACT
GA--AAATCTGGATTTGCGGTCGTCTGTG-CCAAGTTTGCATTTCCTTG----------------ATGTGGTTTGCTGCA
GTTCTCTTATCTTCCTG--TTTTTGGTGGTTTGTTGCTGAAATTCTTGCCTGTGTGCAGCTGATGGTAAGTGCAGTGATC
CTGCTGCCCCT---------AATTTGGTTCAGGTCATGGACTGCAC-----CGGGAATGCA-------------------
-------------------------------------------------------TGTCCTGATGTTCCAGTCCCAGAGT
GATGATAGA-----------------------------------------------------------------------
-------------------------------------------------------------CTAACTGTATTTGAATATT
TTCAGACACAGAGATCTTCTGCAATGGATTT-GTTGATGCGCACAGATTTATTTCCTCCTTCGCAAGAG---------TG
ACTGTGCTGCAGCATGTGTAATTTGGGATGCAGTTTCA------------------------------------------
-----------------------------------------------------------
>chr5D_367
ACGAATC-------------------------------------------------------------------------
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------------------------------------------------------------TCCGA-----------CGCT
TCCTTCCATTTCCTGTAATGCGTGATCAAATATGTCGACTCCGTGTTTGTGCAAATGCTCCAAAGAAGCAACAACCTCCG
AGCCGAGCGTGTCATTGTTTGTGTGCTGAATGTGGCGTATCACTATGTCCTTAGTTGCCGCGTAGTTAAAC---------
-------------------TTAAACCCCGTGATGATGTGAGAATTT-CACATGTTGTTGCAACTTGTCATTGCTGGCGCA
TGTCATGGTCTTCCCTCGAAACTATCACATCATGGCTGGTTGTTTCACAGTGC-TTT-AAAGAAGCAGCATCTTATGAAC
TATTTC-GCCCCCT--AAACATATTTGTGCTTTTGATTAATCTATCAGGGAAGACTTCAGTTTGGACTGTAGATTGTGAT
TCAACTCCCCTATTGTTTACAGACCTGCGGATTTTTT---CTGAATG-GCAGAGGCAAATTTATTGCCTCCTCATGCTTC
GGTTGTGGTGGTGAAGCAGTTCTGTAGTTTTTT---CAGTTAGATGCAATAGTTTATTTTGATGCATATGGTGTAA---T
GTTCTAATGCACTTTGA----CGCTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTCTATGTT
CTGACTTGGTGCATCTTTGTAATGGTTTTAGATAGGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTGCTA
TAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCACAAAGTGAAGCAGCCAAAGGGAACAC
CAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTGCTGCGGTTCTCA
GGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCCGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGAGAA
GAACGTCTTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCT------AGCTCTGGCCATTGCTGGTGGTAGCTGCAATGTCC
TGTTATCCCCTGTGAAGCACAAGCGGTCAAAGAGGGGGGCACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCATCT
CTCCTGCTGCTTTCAGAGCATTTCAGCAA---------------------------------------------------
---------------------------------------------GGTTCGATCTACTGAGTTCAAGAAGCCAAAAGGTT
GCAAGTGTTCAGCTTATGATATTTGCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATTTTGCCAAGGAAAAA
ACTTCGATCCCTAATATTGCTAAGCATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGATCCC
CAATGTTGACAAGAAGGAAAGAAGTTTGATTGCCAATGTTCCTAAGAAGTACAACACTTTGATCTCCATTGTTCTTGAGG
AGGTAGATCTGAATGTGCTTGATCATGTGCTAGCTGGAGATGCTGAGCTTAGGAAGA-----------------------
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----------------------------------------------------------------AGCAAAGAACTGACAA
TTCAGTTGAGATGAAGTGTGCTGATTTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGTCGAA
AGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCGACTTCCAGG
TCTCACTGACATCACTATTTTCTCGGGCTTAAAATCTGAGCCTGAGCCATGGCGTGTTGCAAGCAGCGTTCACTGAGACA
ATGCCGATGCACA-AGTTGTCTGAACTGCTACAGTCACTTCACTTTTGTGTATAGTCAATCAGCCTGATAGCAAAACTTC
CAATTTTTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCATTCTCTTTACCAAC-AAATTTTCGTGGCAGTAAA-GG
CCAAGGATCGTATGCAGTTGCTTGGTTGGTGCAAAGTACAGCAC-TTTGCTCAGTT------------------------
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>chr5D_1816
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------------------------------------TGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTGAGG
AGGTAGAGCTGAATGTGCTTGATCATGTTCTGGCTGGAGATGCTGAGCTTAGGAAGTACTCCCTCCGTTCCTAAATATAA
GTCTTTGTAGATATTCTACTACGGACTACATACGGAGCAAAATGAGTGAATCTATACTCTAAAATGCATCTATATACACC
CGTATGTGTTTCATAGTGAAATCT--------------------------------------------------------
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-------------------------------------------------------------CTACAAAGACTTGTATTTA
GGAACGG-------------------------------------------------------------------------
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---------------------------------------------------------AGGGAGTAGCAAAGAACTGACAA
TTCAGTTGAGATGAAGCGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGTCAGCGTTGGGAGGGCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCCGAA
AGCCCTGATTCTGTTGTGATGGAAGAGCAAAAGCAGAAGCTTGAATTGCCCACCAAGTTTCTTGATCTCCGGCTTCCAGC
TCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGCGTTCACTGAGCCA
ATGCCAATGCACACAGTTGTCTGAACTGCTACAGTCACTTCACTTCTGTGTATAGTCAATCAGCCTGATAGCAAAACTTC
CAATTTGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTTCTCTTTACCAGCAAATTTTTCGTGGCAGTAAA-GG
CCAAGGATCGTATGCAGTTGCTTGGTTGGTGCACAGTACAGCACCTTTGCTCAGTTGAATGCACAAGCATGAGATTGTGT
CATTCTAGCACTAACTAATGATCTGGAGTTGCCTAACTGCCGTATGCTTTCTCCTTGCACACTTGTGTTTCTGTAAATGT
TCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCAGGTCAGAATTTTTTTTCAATTTGTTACTGTATTTGTTTATTCT
GTTGGCTTTTTGGATGTGGTAGC----AAGAAATAAATAATCACTGCTCTGATTGTCACTGTCGTGGCACTGTCAATGGC
ATGCATTATGGCATTGGTTT-TTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGC-ATTCTGCTATGCTCCCTGGACT
GA--AAATCTGGATTTGCAGTTGTCTGTGTCAAAGTTTGCATTTCCTTG----------------ATGTGGTTTGCTGCA
GTTTCTCTATCTTCCAC--TTTTTGGTGGTTTCTCGCTGAAACTC-TGCCTGTGTGCAGCTAATGGTAAGTGCAGTGATC
CTGCTGCCCCT---------AATTTGGTTTAGGTCATGGACTGCAC-----CGTGAATGCATGTCCTGATGTTCCAGTCC
CAGAGTGATGATGGACTAACTGTATTTGAATATTTTCAGACACAGAGATAATGCATGTCCTGATGTTCCAGTCCCAGAGT
GATGATAGA-----------------------------------------------------------------------
-------------------------------------------------------------CTAACTGTATTTGAATATT
TTCAGACACAGAGATCTTCTGCAATGGATTT-GTTGATGCGCACAGATTTATTTCCTCCTTCGCAAGAG---------TG
ACCGTGCTGCGGCATGTGTAATTTGGGATGCAGTTTCA------------------------------------------
-----------------------------------------------------------
>chr5A_1818
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--------------------------------------TTCCTGAGAAGGACAACACTTTGATCTCCATTTTTCTTGAGG
AGGTAGAGCTGAATGTGTTTGATCGTGTTCTGGCTGGAGATGCTGAGCTTAGGAAGAAGCAAAGAAAAATGGAGATACTT
CCTTGGGCGATGGCCGGACTTGCCAGTTCTGGTCCGATCATTGGCTGCATGGTCAGACCGTTGCCGAGATTGCGCCGACA
TTGCTGCTTCACATCCCACGCAGACGTAGACGCAGCAGATCAGTGCGTGATGGGATCATGGACCGGACCTGGATCCGCGA
CATCCATGGCTCTCTGGGACCGGCCGCCACGATCAAGTACTTTGATCTTTGGCGGCATATTCAGCAGGTCCAACTCTCTG
ACGCGCCCGACAAAATCTCCTGGAAGTGGACTCAAAGCGGGAAATATTCAACTTCTTCGGCCTACAAAGCCCTCTTCCTA
GGCTCCACACCGCGCCTAACTGGCGACCCATTTGGAGGTGCTGGGCGCCGACGAACGCCAAGTTCTTTCTATGGCTAGTT
TCCCTGGACCGCCGCTGGTCTGCGGAACGAAGAGCGCGCCACGGCCTGCCTCACGAATTCACGATCCCCATTGCAAGCTG
TGTGACCAAGAGTTCGAGACCATGGATCACTTGCTTGTTCAATGCGTCTTCTCGAGGATCACTTGGCACGAGATCTTATC
CTGGTGTCGCCTCCTGGTGCCCCTGCCCGATGCCAACCCGTCCTTCTTCGCGTGATGGTCCGCCTCGTTGGCTGCTTCTC
CAGCAAGCCTGAGGAAAGGCCTCAACTCCCTTGTAGCTCTCACATCTGGAAGCATCGCAATGCCGCTCTCTTCGATGACC
TCCGACCATCTACCGACGCCCTTGTCCACACCATCAAGGAGGAAGCCCGGCTTTGGTCCAAAGCCGGCGCCCTAGGCTTA
GCACTTATAATCCCTGTAACCTAGATCGTGTGTACAAAGGCTGAGCATCGTTCCTCATGCTCGCACCACACTCCTGGGGA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCTCCTTTCCACCTATCAATGAAATGATACGCAACTTTGCGTATTCACGAAAAAGGAAGAAGCAAAGAACTAACAA
TTCAGTTGAGATGAAGTGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGTCAT
TTGGGTCAGGGGCAGCGTTGGGAGGCCACATGAGGTGTCACCTTCCTAGATTCAATGATCGCCGTCATGGGTTCGCCGAA
AGCCCTGATTCTGTCATGATGTAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCGACTTCCAGG
TCTCACTGACATCACTATTTTCTCAGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGAGCAA
ATGCCGATGCACACTGTTCTCTGAACTGCTACAGTCACTTCACTTTTGTGTATAGTCAATCAGCCTGATAGCAAAAACTC
CAATTCGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTTCTCTTTACTGGC-AAATTTTCCTGGACAGTGAGGG
CCAAGGATCGTATGCAGTTGCTTGGTTGCTGCACAGTACATCACCATTGCTCAGTTGAATGCACAAGCATGAGATTGTGT
C-TTCTAGCACTAACTAATGATCTGGAATTGCCTAAATACCGTGTACTTTTTCCTTGCACACTTGTGTTTCTGTAAATAT
TCATATCTTGAAATGGTTCTTCAATAAAAGAGTAGCTGGTCAGAATTTTTTTCAGTCTGT------TATTTTTTTGTTCT
GACGG-CTTTTGGATGTGGCATAAGGAAATAAATAAATAATCACTGCT---ATTGTCACTATAGTGGCACTAC--ATGGC
ATGCATTATGTCATTGGTTT-TTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGC-ATTCTGCCATGCTCCCTGGACT
GAGAAAATCTGGATTTGCAGTTGTTTGTGT-CAAGTTTGCATTTCCTTG----------------ATGTGGTTTGCTGCA
GTTTCTCTATCTTCCCCCTTTTTTTGTTGTTTCTTGCTGAAACTC-TGCCTGTGTGCAGCTGATGGTAAGAGCAGTGATT
CTGCTGTCCCT---------AATTTGGTTCAGGTCATGGACTGCAGTGCACGGTGAATGCATGT----------------
-----------------------------------------------------------CTGATGTTCCAGTTCCCA---
---AATAGA-----------------------------------------------------------------------
-------------------------------------------------------------CTAACTGTATTTGAATATT
TTCAAACACAGAGATCTTCCGCGATGGATTT-GTCAATGCGCACAGATCCATTTCTTCCTTCGTAATCGCAAGAGTGTTG
AGGGTGCTGTGGCATGTGTGATTTCGGATCCATTTCATGTTCTTTTTGATGTTCCAGTGTGTTAAGCTTAATG-------
-----------------------------------------------------------
>chr5D_2452
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-----------------------------------------CACCTTTACTCAGTTGAATGCACAAGCATGAGATTGTGT
CATTCTAGAACTAACTAATGATCTGGAGTTGCCTAACCGCCGTATACTTTCTCCTTGCATACATTTGTTTCTATAAATAT
TCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCA-AA-TTTTTTCCAATTTGTTACTGCATTTGTTTGTTCT
GTTGG-TTTTTGGAAGTGGTAGC----AAGAAATAAATAATCACTGCTTTGACTGTCACTGTCGTGGCACTGTCAATGGC
ATGCATTATGTTATTGGTTTCTTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGC-ATTCTGCCATGCTCCCTGGACT
GA--AAATCTGGAGTTGCGGTCGTCTGTG-CCAAGTTTGCATTTCCTTG----------------ATGTGATTTGCTGCA
GTTCTCTTATCTCCCTG--TTTTTGGTGGTTTGTTGCTGAAAGTCTGGCCTGTGTGCAGCTGATGGTAAGTGCAGTGATT
CTGCTGCCCCT---------AATTTGGTTCAGGTCGTGGACTGCAT-----GGTGAATGCATGT----------------
-----------------------------------------------------------CTGATGTTCCAGTCCCCCAGA
TAACTAAGGCCTTGTTTGGATTACCGTTTTCGTCGCAAATACCTCTGTGGAAAAAATACAGATCTTTGCCCCTCGTTTTG
TTTCTGGCTGGAAATCTGCTTAGTGGCGTCTGTATTTGATTACACTGCTTCCAAGTGCGGCCTAACTATATTTGAATATT
TTCAAACACAGAGATCTACTACGATGGATTT-GTCGATGCACACAGATCCATTTCTTC----------GCAAGAGTGTAG
AGCGTGCTGCAGCACGTGTGATTTAGGATTCATTTAATGTT-TTTGTGATGTTCCAGTGTGTTAAGCTT-----------
-----------------------------------------------------------
>SNPs
---------S--------------------------S-------------------------------------------
---------S--------------------------------------------------------------S-------
----------------------------------------------SS-----------------------------S--
------------------------------S--S---------------------------S---------------S--
--------------------------S-------S---------------S-----------------------------
---------------S----S------------------------------S----------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------------------------------S----
------------------------S-----S------SSS----------------------------------------
-----------------------------------------------S--------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S-------S----
--------------------------------------------------------------------------------
--------------------S--------------------------------S--------------------------
---------------------------------------S---------------S------------------------
--------------------------------------------------------------------------SS----
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
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----------------S-----------------------------------------------------S---------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------S-----------
--------------------------------------------S-----------------------------------
------------------------------------S-------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------S-S--SSS---SSSSSSSSSSSSSSSS---------------
-------S---------------------------------------------------------------S--------
----S------------------S------S--SSSSS-SSS-SS-----------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-----S-------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_238
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----------------------------------------------------------TCTGCTGCGTTCTAATCCGT--
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>reverse_1496
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-------------------------------------------------------CAATGAGATGGATGCTGCAGC----
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>forward_1381
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-AACGTCTTGAGTAAGCCCGC-----------------------------------------------------------
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>reverse_4437
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------------------------------------CTGGTCGTGGATGCATGTCT------------------------
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-----------------------------------------------------------
