>input_sequence_56454
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------------------------ATGGTTTTAGATATGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTG
CTATAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAA
CACCAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTGCTGCGGTTC
TCAGGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGA
GAAGAACGTCTTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGCCATTGCTGGTGGTGGCTGCAATG
TCCTGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGACACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCC
TCTCTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTTATGAAGATTGCTATACAGAAGTTATGGACAGTTTGCC
CCCCAATGTGTCAAAGGATGTGAAGCTGAATGCTTTTGATCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAG
GTTGCAAGTGTTCAGCTTATGATATTTGCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATGTTGCCAAGGAA
AAAACTTCGATCCCTAATATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGAGAATGTGAGAAGGACAGCAGCTTGAT
CCCCAATGTTGAGCTGAAGGAAAGAAGTTTGATCGCCAATGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTG
AGGAGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA--------------------
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-------------------------------------------------------------------AGCAAATAACTGA
CAATTCAGTTGAGATGAAGTGTGCTGATTTTTCAGCTGCAGTGAATGTCAAGAGGCACCGGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCATCATGGGTTCGCC
GAAAGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGGCACCAAGTTTCTTGATCTCCGACTTCC
AGGTCTCACGGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGA-
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>chr5B_1_TraesCS5B01G079600
GAGGATCCCATCCTCTCCGGGGAGCTCCTCGATCTGGAGCTGTTCGAGGTGGGTTCCCGAGCTCAGTTGCATCGCTTACT
GGTTCTGGATTGAGCAGCGTCGCTGGTTCCCGAGCGCTGTTCTCTCCGATTCCTCACTGATTTTGATCGAATTGCGTCTC
TGGTTTTGCAATTCGGGTGGTTTAGTGTTTGCTCCTGGATTAATCGTCTGTGTTTGCTTCTGCTGCGTTCTAATCCGCTT
CCTGCAATCTCGTTTCAGCGATCAAGCCCTCCCTTGCATTCCCTGAGCAATCCGGAACCGCCCCGCCCTCCTCTCACACG
GGTTCACGAGACAGGAACTCGAGCCTCCAGGTAAAAAAATCCCATTCCATTCCACGTATTTCTGA-----------CGCC
TTCTTCCGTTTCCTATAATGCGTGATCAAATGC--CGTCTCCGTGTTTGTGCAAATGCTCCAAAGAAGCAACAACTTGTG
AGCTGAGCGTATCA----TTGTTCGTGTGCTCAATGTGGCGTATTGCTGTGTCCTTAGTTGCTTCGTAGTTAAAC-----
-----------------------TTAAACCCCGTGATGATGTGAT----------TGTTGTTGCAGCTTGTCATTGCTGG
CGCATGTTATTGTCTTCCCTC-AAACTATCACATGATGGCTGGTTGTTTCACAGTGC-TTTCAAAAAGCAGCATCTTATA
AACTATTTTCGCCCCACTAAAACCTTCCTGTGCTTTTGATTAATCTGTCAGGGAAGACTTCAGTTCGGGCTGTAGATTGT
GATTCAACTCACCTGTTGTTTACAGACCTGCGGATTTTTT---CTGAATA-GTAGAGGCAAATTTATTGCTTCCTCATGC
TTCGGTAGTGGTGATGGAGCAGTTCTGTAGTTTTTTTTTCAGTTAGATGCAATAGTTTATGTCGATGCATATGGTGCAA-
--TGTTCTAATGCACTTTGCCTTCTGCTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTTTGT
GTTCTGACTTAGTGCATCTTTGTAATGGTTTTAGATATGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTG
CTATAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAA
CACCAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTGCTGCGGTTC
TCAGGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGA
GAAGAACGTCTTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGCCATTGCTGGTGGTGGCTGCAATG
TCCTGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGACACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCC
TCTCTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTTATGAAGATTGCTATACAGAAGTTATGGACAGTTTGCC
CCCCAATGTGTCAAAGGATGTGAAGCTGAATGCTTTTGATCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAG
GTTGCAAGTGTTCAGCTTATGATATTTGCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATGTTGCCAAGGAA
AAAACTTCGATCCCTAATATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGAGAATGTGAGAAGGACAGCAGCTTGAT
CCCCAATGTTGAGCTGAAGGAAAGAAGTTTGATCGCCAATGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTG
AGGAGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA--------------------
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-------------------------------------------------------------------AGCAAATAACTGA
CAATTCAGTTGAGATGAAGTGTGCTGATTTTTCAGCTGCAGTGAATGTCAAGAGGCACCGGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCATCATGGGTTCGCC
GAAAGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGGCACCAAGTTTCTTGATCTCCGACTTCC
AGGTCTCACGGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGAG
CCAATGCCGATGCACACAGTCGTCCGAACTGCTACAGTCACTTCACTCTTGTGTATAGTCAATCAGCCTGATAGCAAAAC
ATCCAATTTGTCTATTTGTAAATAGTCACAAGCTTTGCACTGGTCCTTCTCTTTACCGGC-AAATTTTCCTGGCAGTAAA
-GACCAAGGATCTTATGCAGTTGCTTGGTTGGTGCACAGTACATCACCTTTGCTCAGTTGAATGCACAAGCATGAGTTTG
TGCCATTCTAGCACTAACTAATGATCTGGAGTTGCCTAACCGCCGTATACTTTCTCCTTGCGCACATTTGTTTCTGTAAA
TGTTCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCAGAA-TTTTTTTCAATTTGTTACTGTATTTGTTTGT
TCTGTTGGC-TTTTGGATGTGGTAGC----AAGAAATAAGTAATCACTGCTCTGATTGTCACTGTCGTGGCATGCGTTAT
GGGC----TTATGGCATTGGTTT-TTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGCAATTCTGCTATGCTCCCTGG
ACTGA--AAATCTGGATTTGCAGTTGTCTGTG-CAAAGTTTGCCTTTCCTTG----------------ATGTGGTTTGCT
GCAGTTTCTCTACCAAGA--------------------------------------GTGCAGCTGATGGTAAGTGCAGCG
AAAAAAAAAATTCAAAAAAAAAAAAATTGGTTCAGGTCATGGACTGCAC-----AGTG-ATGCATGTCTGATGTTCCAGT
TCCCAGACAGA---------------------------------------------------------------------
---------------------------------------------------------------------CCAACTGTATT
TGAATATTTTCAAACACAGAGATCTTCCGCGATGGATTTTGTCAATGCGCACATAGCG------TCCT------TCGCAA
GAGTGTAGAGCGTGCTGCGGCATGTGTGATTTGGGATCCATTTCATGTT-TTTCTGACGTTCCAGTGTGTTAAGCTTAAT
GCACTAGCCAACACAACC-AAAATCCAAACTAATTACAATTGCAAGGGCTAGACAGTCCACATATACTCCCTCCATTTCT
AAATATAAGCCTTTCTAGAGATTTCAATATGA
>chr5D_1
GACGATCCCGTCCTCTCCGGGGAGCTCCTCGATCTGCAGCTGTTCGAGGTGGGTTCCCGAGCTCAGTTGCCTCGCTTACT
GGTTCTGGACTGATCGGCGTCGCTGGCTGGCGAA------TCTCTCCGATTCCTCACTGAATTTGATCGAATGGCGTCTC
TGGTTTCGGAATTCGGGCGGTTTAGTGCTTGCTCCTGGATTAATCGCTTGTGTTTGCTTCTGCTGCGTTCTAATCCGTTT
CCTGCAATCTCGTTTCAGCGATCAAGCCCTTCCCTGCATTCCCTGAGCAATCCGAAACCGCGCCGCCCTCCTCTCACGCG
GGTTCACGAGACAGGAACTCGAGCCTTCAGGTAATAAA-TCCCATTCCATCCCACGAATTTCTGA-----------CGCC
TTCTTCCGTTTCCTGCAATGTGTGATCAAATGC--CGTCTCCGTGTTTGTGTAAATGCTCCAAAGAAGCAACAACTTGTG
AGCTGAGCGTATCA----TTGT----GTGCTGAATGTGGCGTATCACTGTGTCCTTAGTTGCTGCGTAGTTAAAC-----
-----------------------TTAAACCCCGTGATGATGTGAGAATTTTCACATGTTGTTGCAACTTGTCATTGCTGG
CGCATGTTATTGTCTTCCCTC-AAACTATCACATCATGGCTGGTTGTTTCACAGTGCTTTTAAAAAAGCAGCATCTTATA
AACTATTTT-GCCCCACTAAAACCTACTTGTGCTTTTGATTAATCTGTCAGGGAAGACTTCAGTTCGGACTGTAGATTAT
GATTCAACTCCCCTGTTGTTTACAGACATGCGGTTTTTTTTTCCTGAATA-GTAGAGGCAAATTTATTGCTTCCTTATGC
TTCGGTAGTGGTGGTGGAGCAGTTCTGTAGTTTTTT--TCAGTTAGATGCGATAGTTTATTTTGATGCATATGGTGTAA-
--TGTTCTAATGCACTTTGCCTTGCGCTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTCTGT
GTTCTGACTTGGTGCATCTTTGTAATGGTTTTAGATATGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTG
CTATAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAA
CACCAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTCCTGCGGTCC
TCAGGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGA
GAAGAACGTCTTGAGTAAGCCCGCCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGTCATTGCTGGTGGTGGCTGCAATG
TCCTGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGGTACCACCACTCAAGTTCAATGAGATGGATGCTGCAGCC
TCTCTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTTATGAAGATTGCTATACAGAAGTTATGGACAGTTTTGC
CCCCAATGTGTCGAAGGATGTGAAGCTGAATGCTTTTGATCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAG
GTTGCAAGTGTTCAGCTTATGATATTTTCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATGTTGCCAAGGAA
AAAACTTCGATCCCTAATATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGAT
CCCAAATGTTGAGCTGAAGGAAAGAAGTTTGATCGCCAATGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTG
AGGAGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA--------------------
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-------------------------------------------------------------------AGCAAAGAACTGA
CAATTCAGTTGAGATGAAGCGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCC
GAAAGCCCTGATTCTGTTGCGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCAACTTCC
AGGTCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGCGTTCACTGAG
CCAATGCCGATGCACACTGTTGTCTGAACTGCTACAGTCACTTCACTTTTGTGTATAGTCAATCAGCCTGATGGCAAAAC
TTCCAATTTGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTGCTCTTTACCGGC-AAATTTTCGTGGCAGTAAA
-GGCCAAGGATCTTATGCAGTTGCTTGGTTGGTGCACAGTACAGCACCTTTGCTCAGTTGAATGCACAAGCATGAGATTG
TGTCATTCTAGCACTAACTAATGATCTGGAGTTGCCTAACTGCCGTATGCTTCCTCCTTGCACACATTTGTGTCTGTAAA
TGTTCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCAGAG--TTTTTCCAATTTGTTACTGTATTTGTTTGT
TCTGTTGG-TTTTTGGATGTGGTAGC----AAGAAATAACTAATCACTGCTCTGATTGTCACTGTCGTGGCACTGTCAAT
GTCATGCATTATGGCATTGGTTT-TTGTGTTCA-----ATTGGTTTCTTGTGAATGAGGC-ATTCTGCTATGCTCCCTGG
ACTGA--AAATCTGGATTTGCAGTTGTCTGTG-CCAAGTTTCCTTTATGTTGTTTGCTTGCATTTCCTATGTGGTTTGCT
GCAGTTTCTCCATCTTCCACTTTTTG--GTGGTTTCTCGCTGAAACTCT-GCCTGTGTGCAGCTGATGGTAAGTACAGTG
ATTCTGCCGTCCCT---------AATCTGGTTCTGGGTTCTGGTCGTG---------G-ATGCATGTCTGATATTCCAGT
-CCCAGATAGA---------------------------------------------------------------------
---------------------------------------------------------------------CTAACTGTATT
TGAATATTTTCAAACACGGAGATCTTCCGCGATGGATTT-GTCAATGCGCACAGAGCCATTTCTTCCT------TCGCAA
GAGTGTAGAGCGTACTGCGGCATGTGTGATTTGGGATCCATTTCATGTT-TTTGTGATGTTCCAGTGTGTTAAGCTTAAT
G-------------------------------------------------------------------------------
--------------------------------
>chr5A_1
GACGATCCCATCCTCTCCGGGGAGCTCCTCGATCGGGAGCTGTTCGAGGTGGGTTCCCGAGCTCAGTTGCCTCGCTTACT
GGTGCTGGATTGATCGGCGTCGCTGGCTGGCGAA------TCTCTCCGATTCCTCACTGAATTTGATCGAATTGCGTCTC
TGGTTTCGGAATCCGGGCGGTTTAGTGCTTGCTCCTGGATTAGTCGTCTGTGTTTGCTTCCGCTGCGTTCTAATCCGGTT
CCTGCAATCTCGTTTCAGCGATCAAGCCCTCCCTTGCATTCCCTGAGCAATCCGAAACTGCACCCC------------CG
GGTTCACGAGACAGGAACTCGAGCCTCCAGGTAAAAAAATCCCATTCCATTTCACCAGTTTCTGATGTTATTACCGCGCG
TTCTTCCGTTTCCTGTAATGCCTGATCAAATGC--GGTCTCCGTGTTTGTGCAAATGCTCCAAAGGGGCAAGAAATTGTG
AGCTGAGCGTATCATTGTTTGT----GTGCTGAATGTAGCGTATCACTGTGTCCTTAGTTAGTTACCGCGCTACATTGCT
ATGATTCAGATTCACAGTATTTGTTAAACCTCGTGATGGTGTGAGAATTT-CACATGTTGTTGCAACTTGTCATTGCTAG
CGCATGTTATTGTCATCCCTC-AAACTATCACATCATGGCTGCTTGTTTCACAGTGCTTTTAAAAAAGCAGCATCTTATA
AACTATTTT-GCCCCCCTAAAACCTACTTGTGCTTCTGATTAATCTGTCAGGGAAGACTTCAGTTCGGGCTGTAGATTGT
GATTCGACTCCCCTGTTGTTTACAGACCTGCGGATTTTTT---CTGATGTTGTAGAGGCAAATTTATTGCTTCCTTATTC
TTCAGTAGTGGTGGTGGAGCAGTTCTGTAGTTTTTT---CAGTTAGATGCAATAGTTCATTTTGATGCATATGCTGTAAT
AATGTTATAATGCACTTTGCCTTCCACTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTCTGT
GTTCTGACTTAGTGCATCTTTGCAATGGTTTTAGATATGGCACCACGAGGAAGATCTCCGAAGCATGTGTGCAACAAGTG
CTATAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCGCAAAGTGAAGCAGCCAAAGGGAA
CACCAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGATTTTGCTGTGGTTC
TCAGGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCTGCGATTCTCTGAGGAAGCACATGAGAGAGCATGGGGA
GAAGAACGTCCTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCTGATGGAAGCTCGGGCCATTGCTGGTGGTGGCTGCAATG
TCCTGTTATCCCCTGTGAAGCGCAAGCGGTCAAAGAGGGGGGCACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCC
TCTCTCCTGCTGCTTTCAGAGCATTCTAGCAAGATTTCAGCTAATGAAGATTGCTATACAGAAGTTATGGACAGTTTGCC
CCCCAATGTGTCGAAGGATGTGAAGCTGAATGCTTTTGGTCATCAACTGGTTCGATCTGCTGAGTTCAAGAAGCCGAAAG
GTTGCAAGTGTTCATCTTATGATATTTGCTATGGGCAATGTGTTATGGACACCAACTTGATCCCCAATGTTGCCAAGGAA
AAAACTTTGATCCCTAACATTGCCAAGAATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGAT
CCCCAATGTTGACAAGAAGGAAAGAAGTTTGATCGCCAATATTCCTGAGAAGGACAACACCTTGATCTCCATTGTTCTTG
AGGAGGTAGAGCTGAATGTGCTTGATCATGTGCTGGCTGGAGATGCTGAGCTTAGGAAGA--------------------
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-------------------------------------------------------------------AGCAAAGAACTGA
CAATTCAGTTGAGATGAAGTGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCC
GAAAGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGGCGCCAAGTTTCTTGATCTCCGACTTCC
AGGTCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGAG
CCAATGCCGATGCACACAGTCGTCTGAACTGCTACAGTCCCTTCACTTTTGTGTATAGTCAATCAGCCTGATAGCAAAAC
TTCCAATTTGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTTCTCTTGACCGGC-AAATTTTCATGGCAGTAAA
-GGCCAAGGATCTTATGCAGTTGCTTGGTTGCTGCACAGTACAGCACCTTTGCTCAGTTGAATGCACAAGCATGAGATTG
TGTCATTC-AGCACTAACTAATGATCTGGAGTTGCCTAACTGCCATATACTTTCTCCTTGCACACATTTGTTTCTGTAAA
TGTTCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCAGAATTTTTT--CAATTTGTTAATGTATTTGTTTGC
TCTGTTGG-TTTTTGGATGTGTTAGC----AATAAATAAATAATCACTGCTCTGATTGTCACTGCCGTGGCACTGTCAAC
GTCATGCATTATGGCATTGGTTT-TTGTGTTCAGTTCAACTGGTTTCTTGTGAACGAGGC-ATTCTGCTATGCTCCCTGG
ACTGA--AAATCTGGATTTGCGGTCGTCTGTG-CCAAGTTTGCATTTCCTTG----------------ATGTGGTTTGCT
GCAGTTCTCT----------------------------------------------------------------------
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>chr5D_374
ACGAATC-------------------------------------------------------------------------
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------------------------------------------------------------TCCGA-----------CGCT
TCCTTCCATTTCCTGTAATGCGTGATCAAATATGTCGACTCCGTGTTTGTGCAAATGCTCCAAAGAAGCAACAACCTCCG
AGCCGAGCGTGTCATTGTTTGT----GTGCTGAATGTGGCGTATCACTATGTCCTTAGTTGCCGCGTAGTTAAAC-----
-----------------------TTAAACCCCGTGATGATGTGAGAATTT-CACATGTTGTTGCAACTTGTCATTGCTGG
CGCATGTCATGGTCTTCCCTCGAAACTATCACATCATGGCTGGTTGTTTCACAGTGCTTT-AAAGAAGCAGCATCTTATG
AACTATTTC-GCCCCCT--AAACATATTTGTGCTTTTGATTAATCTATCAGGGAAGACTTCAGTTTGGACTGTAGATTGT
GATTCAACTCCCCTATTGTTTACAGACCTGCGGATTTTTT---CTGAATG-GCAGAGGCAAATTTATTGCCTCCTCATGC
TTCGGTTGTGGTGGTGAAGCAGTTCTGTAGTTTTTT---CAGTTAGATGCAATAGTTTATTTTGATGCATATGGTGTAA-
--TGTTCTAATGCACTTTGA----CGCTCCACATGTTGTGGAAAAAGATTAGTGAGTTAATGTTCAGTTCATCTCTCTAT
GTTCTGACTTGGTGCATCTTTGTAATGGTTTTAGATAGGGCACCACGAGGAAGACCTCCGAAGCATGTGTGCAACAAGTG
CTATAAGAACTTTCCTTCAGGGAGGGCTCTTGGAGGCCACATGTCACTCCACTGGCACAAAGTGAAGCAGCCAAAGGGAA
CACCAAGCCCTCCTGCCACTGTTGTCGACTTGAATGTGTCGCTGCTGAGTCCAAGTGATGAGGAGACTTTGCTGCGGTTC
TCAGGAACACAATGCCAGCTGTGCTCAAAGGTGTTCTCTGCCCGCGATTCTCTGAGGAAGCACATGAGAGAGCACAGGGA
GAAGAACGTCTTGAGTAAGCCCGTCGAAGAAGCAGCTGGGCT------AGCTCTGGCCATTGCTGGTGGTAGCTGCAATG
TCCTGTTATCCCCTGTGAAGCACAAGCGGTCAAAGAGGGGGGCACCACCACTCAAGTTTAATGAGATGGATGCTGCAGCA
TCTCTCCTGCTGCTTTCAGAGCATTTCAGCAA------------------------------------------------
------------------------------------------------GGTTCGATCTACTGAGTTCAAGAAGCCAAAAG
GTTGCAAGTGTTCAGCTTATGATATTTGCTATGGGCAATGTGTTAAGGACAACAACTTGATCCCCAATTTTGCCAAGGAA
AAAACTTCGATCCCTAATATTGCTAAGCATTCAGCTTGTGAGGATTGCTTTGGACAATGTGAGAAGGACAGCAGCTTGAT
CCCCAATGTTGACAAGAAGGAAAGAAGTTTGATTGCCAATGTTCCTAAGAAGTACAACACTTTGATCTCCATTGTTCTTG
AGGAGGTAGATCTGAATGTGCTTGATCATGTGCTAGCTGGAGATGCTGAGCTTAGGAAGA--------------------
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-------------------------------------------------------------------AGCAAAGAACTGA
CAATTCAGTTGAGATGAAGTGTGCTGATTTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGTCAGCGTTGGGAGGCCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGTC
GAAAGCCCTGATTCTGTTGTGATGAAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCGACTTCC
AGGTCTCACTGACATCACTATTTTCTCGGGCTTAAAATCTGAGCCTGAGCCATGGCGTGTTGCAAGCAGCGTTCACTGAG
ACAATGCCGATGCACA-AGTTGTCTGAACTGCTACAGTCACTTCACTTTTGTGTATAGTCAATCAGCCTGATAGCAAAAC
TTCCAATTTTTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCATTCTCTTTACCAAC-AAATTTTCGTGGCAGTAAA
-GGCCAAGGATCGTATGCAGTTGCTTGGTTGGTGCAAAGTACAGCAC-TTTGCTCAGTT---------------------
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>chr5D_1816
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---------------------------------------TGTTCCTGAGAAGGACAACACTTTGATCTCCATTGTTCTTG
AGGAGGTAGAGCTGAATGTGCTTGATCATGTTCTGGCTGGAGATGCTGAGCTTAGGAAGTACTCCCTCCGTTCCTAAATA
TAAGTCTTTGTAGATATTCTACTACGGACTACATACGGAGCAAAATGAGTGAATCTATACTCTAAAATGCATCTATATAC
ACCCGTATGTGTTTCATAGTGAAATCT-----------------------------------------------------
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----------------------------------------------------------------CTACAAAGACTTGTAT
TTAGGAACGG----------------------------------------------------------------------
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------------------------------------------------------------AGGGAGTAGCAAAGAACTGA
CAATTCAGTTGAGATGAAGCGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGTCAGCGTTGGGAGGGCACATGAGGTGGCACCTTCCTAGATCCAATGATCGCCGTCATGGGTTCGCC
GAAAGCCCTGATTCTGTTGTGATGGAAGAGCAAAAGCAGAAGCTTGAATTGCCCACCAAGTTTCTTGATCTCCGGCTTCC
AGCTCTCACTGACATCACTATTTTCTCGGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGCGTTCACTGAG
CCAATGCCAATGCACACAGTTGTCTGAACTGCTACAGTCACTTCACTTCTGTGTATAGTCAATCAGCCTGATAGCAAAAC
TTCCAATTTGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTTCTCTTTACCAGCAAATTTTTCGTGGCAGTAAA
-GGCCAAGGATCGTATGCAGTTGCTTGGTTGGTGCACAGTACAGCACCTTTGCTCAGTTGAATGCACAAGCATGAGATTG
TGTCATTCTAGCACTAACTAATGATCTGGAGTTGCCTAACTGCCGTATGCTTTCTCCTTGCACACTTGTGTTTCTGTAAA
TGTTCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCAGGTCAGAATTTTTTTTCAATTTGTTACTGTATTTGTTTAT
TCTGTTGGCTTTTTGGATGTGGTAGC----AAGAAATAAATAATCACTGCTCTGATTGTCACTGTCGTGGCACTGTCAAT
GGCATGCATTATGGCATTGGTTT-TTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGC-ATTCTGCTATGCTCCCTGG
ACTGA--AAATCTGGATTTGCAGTTGTCTGTGTCAAAGTTTGCATTTCCTTG----------------ATGTGGTTTGCT
GCAGTTTCTCTA--------------------------------------------------------------------
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>chr5A_1818
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-----------------------------------------TTCCTGAGAAGGACAACACTTTGATCTCCATTTTTCTTG
AGGAGGTAGAGCTGAATGTGTTTGATCGTGTTCTGGCTGGAGATGCTGAGCTTAGGAAGAAGCAAAGAAAAATGGAGATA
CTTCCTTGGGCGATGGCCGGACTTGCCAGTTCTGGTCCGATCATTGGCTGCATGGTCAGACCGTTGCCGAGATTGCGCCG
ACATTGCTGCTTCACATCCCACGCAGACGTAGACGCAGCAGATCAGTGCGTGATGGGATCATGGACCGGACCTGGATCCG
CGACATCCATGGCTCTCTGGGACCGGCCGCCACGATCAAGTACTTTGATCTTTGGCGGCATATTCAGCAGGTCCAACTCT
CTGACGCGCCCGACAAAATCTCCTGGAAGTGGACTCAAAGCGGGAAATATTCAACTTCTTCGGCCTACAAAGCCCTCTTC
CTAGGCTCCACACCGCGCCTAACTGGCGACCCATTTGGAGGTGCTGGGCGCCGACGAACGCCAAGTTCTTTCTATGGCTA
GTTTCCCTGGACCGCCGCTGGTCTGCGGAACGAAGAGCGCGCCACGGCCTGCCTCACGAATTCACGATCCCCATTGCAAG
CTGTGTGACCAAGAGTTCGAGACCATGGATCACTTGCTTGTTCAATGCGTCTTCTCGAGGATCACTTGGCACGAGATCTT
ATCCTGGTGTCGCCTCCTGGTGCCCCTGCCCGATGCCAACCCGTCCTTCTTCGCGTGATGGTCCGCCTCGTTGGCTGCTT
CTCCAGCAAGCCTGAGGAAAGGCCTCAACTCCCTTGTAGCTCTCACATCTGGAAGCATCGCAATGCCGCTCTCTTCGATG
ACCTCCGACCATCTACCGACGCCCTTGTCCACACCATCAAGGAGGAAGCCCGGCTTTGGTCCAAAGCCGGCGCCCTAGGC
TTAGCACTTATAATCCCTGTAACCTAGATCGTGTGTACAAAGGCTGAGCATCGTTCCTCATGCTCGCACCACACTCCTGG
GGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTCCTTTCCACCTATCAATGAAATGATACGCAACTTTGCGTATTCACGAAAAAGGAAGAAGCAAAGAACTAA
CAATTCAGTTGAGATGAAGTGTGCTGATCTTTCAGCTGCAGTGAAGGTCAAGAGGCACCAGTGTAATGCCTGTGGGAAGT
CATTTGGGTCAGGGGCAGCGTTGGGAGGCCACATGAGGTGTCACCTTCCTAGATTCAATGATCGCCGTCATGGGTTCGCC
GAAAGCCCTGATTCTGTCATGATGTAAGAGCAAAAGCAGAAGCTTGAATTGGACACCAAGTTTCTTGATCTCCGACTTCC
AGGTCTCACTGACATCACTATTTTCTCAGGCTTGAAATCTGAACCTGAGCCGTGGCGTGTTGCAAGCAGTGTTCACTGAG
CAAATGCCGATGCACACTGTTCTCTGAACTGCTACAGTCACTTCACTTTTGTGTATAGTCAATCAGCCTGATAGCAAAAA
CTCCAATTCGTCCATTTGTAAATAGTCACAAGCTTTGCACTGATCCTTCTCTTTACTGGC-AAATTTTCCTGGACAGTGA
GGGCCAAGGATCGTATGCAGTTGCTTGGTTGCTGCACAGTACATCACCATTGCTCAGTTGAATGCACAAGCATGAGATTG
TGTC-TTCTAGCACTAACTAATGATCTGGAATTGCCTAAATACCGTGTACTTTTTCCTTGCACACTTGTGTTTCTGTAAA
TATTCATATCTTGAAATGGTTCTTCAATAAAAGAGTAGCTGGTCAGAATTTTTTTCAGTCTGT------TATTTTTTTGT
TCTGACGG-CTTTTGGATGTGGCATAAGGAAATAAATAAATAATCACTGCT---ATTGTCACTATAGTGGCACTAC--AT
GGCATGCATTATGTCATTGGTTT-TTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGC-ATTCTGCCATGCTCCCTGG
ACTGAGAAAATCTGGATTTGCAGTTGTTTGTGT-CAAGTTTGCATTTCCTTG----------------ATGTGGTTTGCT
GCAGTTTCTCTATCTTCCCCCTTTTTTTGTTGTTTCTTGCTGAAACTCT-GCCTGTGTGCAGCTGATGGTAAGAGCAGTG
ATTCTGCTGTCCCT---------AATTTGGTTCAGGTCATGGACTGCAGTGCACGGTGAATGCATGTCTGATGTTCCAGT
TCCCAAATAGA---------------------------------------------------------------------
---------------------------------------------------------------------CTAACTGTATT
TGAATATTTTCAAACACAGAGATCTTCCGCGATGGATTT-GTCAATGCGCACAGATCCATTTCTTCCTTCGTAATCGCAA
GAGTGTTGAGGGTGCTGTGGCATGTGTGATTTCGGATCCATTTCATGTTCTTTTTGATGTTCCAGTGTGTTAAGCTTAAT
GCACTAGGCTGCACTACGAAAAGTCCGAACTAATTGCAATTGCAAGGGCTAGACAATCCATATATACTCCCTCCATTTCT
AAATA---------------------------
>chr5D_2451
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-------------------------------------------TCACCTTTACTCAGTTGAATGCACAAGCATGAGATTG
TGTCATTCTAGAACTAACTAATGATCTGGAGTTGCCTAACCGCCGTATACTTTCTCCTTGCATACATTTGTTTCTATAAA
TATTCATATCTTGAAATGGTTCTGCAATAAAAGAGAAGCTGGTCA-AA-TTTTTTCCAATTTGTTACTGCATTTGTTTGT
TCTGTTGG-TTTTTGGAAGTGGTAGC----AAGAAATAAATAATCACTGCTTTGACTGTCACTGTCGTGGCACTGTCAAT
GGCATGCATTATGTTATTGGTTTCTTGTGTTCA-----ACTGGTTTCTTGTGAATGAGGC-ATTCTGCCATGCTCCCTGG
ACTGA--AAATCTGGAGTTGCGGTCGTCTGTG-CCAAGTTTGCATTTCCTTG----------------ATGTGATTTGCT
GCAGTTCTCTTATCTCCCTGTTTTTG--GTGGTTTGTTGCTGAAAGTCTGGCCTGTGTGCAGCTGATGGTAAGTGCAGTG
ATTCTGCTGCCCCT---------AATTTGGTTCAGGTCGTGGACTGCAT-----GGTGAATGCATGTCTGATGTTCCAGT
CCCCCAGATAACTAAGGCCTTGTTTGGATTACCGTTTTCGTCGCAAATACCTCTGTGGAAAAAATACAGATCTTTGCCCC
TCGTTTTGTTTCTGGCTGGAAATCTGCTTAGTGGCGTCTGTATTTGATTACACTGCTTCCAAGTGCGGCCTAACTATATT
TGAATATTTTCAAACACAGAGATCTACTACGATGGATTT-GTCGATGCACACAGATCCATTTCTTC----------GCAA
GAGTGTAGAGCGTGCTGCAGCACGTGTGATTTAGGATTCATTTAATGTT-TTTGTGATGTTCCAGTGTGTTAAGCTTTAT
ACACGAGCCAACACAACC-AACAGTCCAAGCA-----AATTGCAAGAGCTAGACAATCTACGTATAC-------------
--------------------------------
>SNPs
----------------------------------------------------------------------S---------
-------------S-S----------S-SS---SSSSSSS--------------------S-------------------
------S-S--------S---------S-------------------------------------------------S--
------------------------------------------------------S------S---------------S--
--------------------------------------------------------S-----------------------
--------------S-----------------------------------------------------------------
----------------------SSSS-----S------------SS----------------------------------
--------------------------------------------S--------------------S--------------
----------------------------------S--------------------------S------------------
---------S---------------S-S----------------------------------------------------
----------S---------------------------------------------------------------------
-------------S----------------------SS----------------------S-S-------------S---
------------------------S---------------------------------------------------S---
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-----------------------------------------S--------------------------------------
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------------S-------------------------------------------------------------------
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------------------------------------------------------S-------------------------
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-------------------------------------------------------------------------S------
---------------------------------------------S-------------S--------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
------------------------S----------------------S--------------------------------
S-----------S-----------------------------S-------------------------------------
--S-------------------------------------------------------------------------S---
--S----------------------------------------------------------S------------------
--------------------------------------------------------------------------------
---------------------------------------S--------------------------------SSSSSS--
--SS--------------------------------------------------------S-------------------
-------------------------------------------S------------------------------------
------------S-SSSS------------------------------------------------------------S-
-SSSSSSSSSSS-SSSSSSSSSS--S----------------------S-----S-------------------------
-------S------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------------S-------------S---S----------------------
-----------------------------------------------------S---S----------------------
--------------------------S--------S-------------------S------------------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_748
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--------TCGCCCCACTAAAACCTTCC----------------------------------------------------
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>reverse_3406
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---------------------------------------------TGTCAAGAGGCACCGGTGTA---------------
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--------------------------------
>forward_894
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-------------------------------------------------------------------------CTCATGC
TTCGGTAGTGGTGA------------------------------------------------------------------
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>reverse_4153
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------------------------------------------------------------------------TGCGTTAT
GGGCTTATGGCA--------------------------------------------------------------------
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--------------------------------
