>input_sequence_56449
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-------------------ATGGCGACTCTCTCCATGGTCTCCGGCCCCGTCGCCACCTCGTCCCTCCCCCTCTCCACCC
GCCGCCGCGCCTCCTCCGTCTCCTTCCCCGCCCCCAAGGTGAGCACCGCCGCCCTCTTCCTCCCC---CTTCCCTCCCCT
TTCGTGCACGACGACCCCTTGGGAAGGAGCTAGTGCCAATCAAGTGCGCTGCTAGGTCTCGGCACACGCCGCTTGCGTTG
TCTGTCTCTGCGTG--TGTAATTTCAAATGATATGCCCGGGATGCTGGAAGAATGGGGT-GAGTTGGTGCCTCTTTCTGT
A---------------------------------AATGTTCAAGCACATTTTGCCTGATAATGTAGTCA-TTTCTTTGCA
CACCAATCTGAATGTTATAGGGAT-GGTTCTTTTTTATTTTTCCTCCCTATATATGTCCCTTCACATGTCTTTACAAAGA
TGAC---CTTTCATATGTAGATGTGTGTAGG-TGACTGTTTAATGGTTTTGATTGATTCTTCTGTTTTTTGGGAACTTG-
--ACAGAAGGGCGGCATTGGTCACGGCGGCCTGCGGATCGAGTGCATCCGTATCGGTGGTGTTGAGATTCCAAACCACAA
GCGGGTGGAGTACTCGCTGCAGTACATCCATGGCATCGGGCGGAACCGCTCCCGCCAGATCCTTTTGGACCTCAGCTTCG
ACAACAAGGTCACCAAGGACCTCTCCGAGGAGGAGGTCATCACACTCCGTAAGGAGGTCACCAAGTACATGATTGAAGGA
GACCTTGTAAG-GCTCTGACCCCTTTGCTAA--------------TATGATCTATTCCATTCCATGTTGTTACAATAACA
GCGCCGTCATGATACATTCTATTAGAGGCTTAGCTAGGACCTGTTTATTTACTTAGTTCTTCCCACATGTCTTTAAAATA
CACCATTTCACTGTTATAACGGAAATT-----------------------------------------------------
-------------ATTAATTCCATGCTGTTACAATAACAATGCCGTCATGGTATTCTATTAGAGGCTTA-----------
------GCTAGAACATGTTTGGTTCTCTCCACAGTTCGTAACCATATTTGTCGTTTTACTATTATATTTGGTAGCATCTT
CAAAAAGAACTGAATAGTTTCCT-CAATGC-TTTACAGAAACGGTTCAACCGTGTAGCGATTGAGAGGATGAAGGAGATC
CGGTGCTACAAGGGCATCCGGCACAAGCTCGGCCTCCCGGTCCGTGGCCAGAGGACAAAGAACAACTGCAGGACGCTCAA
GGGGAAGAGGGCTTCGGTCGCCAAGAAGAAGTCGGCTTCGTCCTCCGACGAATAA-------------------------
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>chr4D_1_TraesCS4D01G039100
CAGCGTGTACTAGCCTCCCTTTTTTCGCCTTTTCTTCTTT----CCTATATATGTATACCTATTTAATTTAGATGTAAAG
ATGTAAGAAACGGAATGGCTCCCTTTAAAGTCGGTATTACGCAAT-AAAAAGGCGCTA-TTGCTGTATCTGCTTCCCTGT
TCTGAAA---TTGCAGTTACCGTTGCTATCTGATTTCCAAGCGCGAGTAT-CAAGGATTTTCTACTAGCAGCCTGGCCAT
GCTGTCATTACATTTTTGTTTGGCT---------------------AAATTTTGTTTAGAGATGTGGTGTGGCTA-TTTT
TTTAGTGGAATGTACATGATGGCTATAATTTC------------------------------CT--TTTTCTTAGCTCTA
CAGAATGGTTATAATTGAGGGATATGGAGTTTCTAAACTCAGAGCTCAAATGTACCCTTGTGAA----------------
----------------AAATTCTAATTTGTTTGGCAACTAACATTGTTGAATTTTCTACATACGTGTAAATTTGTTGAAG
AAAAAATATTCCTAATTGTAGGCGG---AAAAACAAATTTGATGCTTCAAAAAGATTTTCTGCAAGCATTTTTTAATGTT
GATTTGTTATTTTTGCCCGGACCTCCAAGAATGTGATTTCATCATTAACATTTGCATGCATGCAAA--AGAATTAGCAAT
TTTTGTTTTAAAAATCAGA-AATTTTAAATTTATTTTATTACTTTTTGGG-ATATTGGGATTCGTAGCAGAAGCATTTGA
GCTTGGAATTACAAGAACATTTTCAC---------------TTTTTTTTTAGACTTGATTTTAGAATTAACACTTTCACC
ATATTTTTTCGGGCAAAACCCTTTCACAATTGAGACGAGCCGAAACTCTGAGTGGCTTTTAGGCC-----------TTTG
TAGGCTCAGCGACACTTCAGCCTCGAAAGGCCCAAAATCAAGCCCAAGCCCAGGCCCAATACCGG----------AGCAG
CCTCCAGCCACCTTATCGTCTCCCCCCTCGGGTTCTATCCTGGACAGAAGATTCCAGTGGGAAACACACGCGCCTCCTCG
TCGGGCCAGCACAGCAGAAATGGCGACTCTCTCCATGGTCTCCGGCCCCGTCGCCACCTCGTCCCTCCCCCTCTCCACCC
GCCGCCGCGCCTCCTCCGTCTCCTTCCCCGCCCCCAAGGTGAGCACCGCCGCCCTCTTCCTCCCC---CTTCCCTCCCCT
TTCGTGCACGACGACCCCTTGGGAAGGAGCTAGTGCCAATCAAGTGCGCTGCTAGGTCTCGGCACACGCCGCTTGCGTTG
TCTGTCTCTGCGTG--TGTAATTTCAAATGATATGCCCGGGATGCTGGAAGAATGGGGT-GAGTTGGTGCCTCTTTCTGT
A---------------------------------AATGTTCAAGCACATTTTGCCTGATAATGTAGTCA-TTTCTTTGCA
CACCAATCTGAATGTTATAGGGAT-GGTTCTTTTTTATTTTTCCTCCCTATATATGTCCCTTCACATGTCTTTACAAAGA
TGAC---CTTTCATATGTAGATGTGTGTAGG-TGACTGTTTAATGGTTTTGATTGATTCTTCTGTTTTTTGGGAACTTG-
--ACAGAAGGGCGGCATTGGTCACGGCGGCCTGCGGATCGAGTGCATCCGTATCGGTGGTGTTGAGATTCCAAACCACAA
GCGGGTGGAGTACTCGCTGCAGTACATCCATGGCATCGGGCGGAACCGCTCCCGCCAGATCCTTTTGGACCTCAGCTTCG
ACAACAAGGTCACCAAGGACCTCTCCGAGGAGGAGGTCATCACACTCCGTAAGGAGGTCACCAAGTACATGATTGAAGGA
GACCTTGTAAG-GCTCTGACCCCTTTGCTAA--------------TATGATCTATTCCATTCCATGTTGTTACAATAACA
GCGCCGTCATGATACATTCTATTAGAGGCTTAGCTAGGACCTGTTTATTTACTTAGTTCTTCCCACATGTCTTTAAAATA
CACCATTTCACTGTTATAACGGAAATT-----------------------------------------------------
-------------ATTAATTCCATGCTGTTACAATAACAATGCCGTCATGGTATTCTATTAGAGGCTTA-----------
------GCTAGAACATGTTTGGTTCTCTCCACAGTTCGTAACCATATTTGTCGTTTTACTATTATATTTGGTAGCATCTT
CAAAAAGAACTGAATAGTTTCCT-CAATGC-TTTACAGAAACGGTTCAACCGTGTAGCGATTGAGAGGATGAAGGAGATC
CGGTGCTACAAGGGCATCCGGCACAAGCTCGGCCTCCCGGTCCGTGGCCAGAGGACAAAGAACAACTGCAGGACGCTCAA
GGGGAAGAGGGCTTCGGTCGCCAAGAAGAAGTCGGCTTCGTCCTCCGACGAATAAGTGACATTGCCATGTGTATTTACCT
CCTGTTTGGTTTTTGTGCACTACATCACGGCGCTATCACCATTCGGTACTCCATTTCAAGTTTCCATGCTGTCGTAGATG
AATTGT-----GGGAATATGGTCGGATGCTGCTGCGAAGTTTATAGTAATGTCATCTCTTCTGTTATATGCACTGATGGT
GAAC-------------------------------CATCAAGGTTACTTGCGCGTTTCGTCCCAAGCGCGAATG------
-------------TTTTCTTTTGTCGCGGCTCTGCTTGATGCAAAGACGCC-CAACCAGCTACTGATGACTGGGTTAGCT
TATTTGACACCGGTGCTTCGACAAATTTCCAATTGCCATTGCAAGATTATCTTGTGCAGTCATTTTATTTGCAAGCTAGA
CAGAGGAGCTGCAGTGGAAGCTCGATAATCTG--ACTGTCAGGTTTGATTGCTAGTTTGCTACCAGATAGTACAAATTAC
AGTCAGACAAATCATGCAA-----AAATCCAAGGCACGGAAAACCTTTGAATTTGGGATGAATTTGGGGTCACCTAATAG
TAATTTTGTGC-AAGTTCAGACATCTAGTACTTCTGAATTTGACCGACAATGTGAGTTG---GACGTCCGGCTG---CCA
CCCCACGCGCTATACCGACCACTCAAAAACCCCGCGACCCCTTCGAGC------------ACACGACTGCGGCTGCAACA
GTCACACAAAAATCCTTCCC-TCCCTCCCTCCCGTGCCGCGGCCATGGCGCTCGTCTCGCTCTCGCTCTCGCCCCCGTGC
GCGCCCGCCGCCTCCTCGTCTTCCAACCACCTCCTCACGCCGCCGTCGCTCGCCGGCGGCAGCGGTAGCATCAGGAGGGG
AGGGCCACGGGGCAACGCCGGCCTCGCTCTGACGCTGCCGGCCGGGCGTGGGGGTCGGGAGTGGAGGGCGCCGGTGTCGT
CCTTCTCCTCCTTCCTGCCGTCCTTCTTCACGGGGAGCAAGAAGAAGGAGGAGGAGGACGCCAAGAAGGCGGCGACGCTC
AAGGAGGAGCTGCTGGCG
>chr4A_1
CAGCGTGTACTAGCCTTTTTTCAGGCCTTCTC---TTTTCCTTTGCTATATATGTATACCTATTTAATTTAGCTGTAAAG
ATGTAAGAAACGGAATGGCTCCCTTCAAAGTCGGTATTACGCAATAAAAAAGGCGCTATTTGCTGTATCTGCTTCCCTGT
TGTGAAA---TTGCAGTTACCGTTGCTATCCGACTTCCAAGCGTGAGTATT-AAGGATTTTCTACTAGCAGCCTGGCCAT
GCTGTCATTACATCCTCGTTCGAAAAAATCGAATCTGAATTGGCTAAATTTTTGTTTAGAGATGTGGTGTG-CTC-TTTT
TTTAGCAGAATGTACAGAATGGCTATAATTTTATTTTATTTGAAAGCTCTACATTTTTAGGGCT--TTTTTTTAGCTCTA
CAGAATGGCCATAATTAAGGGACATGTAGTCTCTAAACTT-GAGCT------------TGTGAACAGTAAAAAATATGTT
TTTCAAATTCT--------------TTTTTTTGGCAACAAACATTGTTGAATTTTCTACATTCGTGTAAATTTCCCTAAG
AAAAAACATTCATAATGCTCTGGGCAACAAAAACAAATTTGATGCTCCAAAAGGAATTTTTTTAAAGCA-----------
---TTGTTATTATTTTCTAGACATCCA--AATGTGATTTCATCATTAAAAGTTGCATGCAGGCAAACAAAACTAAGTAAC
TTCTGTTTAAAAAAAATCAGAATTTTAAATGCTTTTACTATTTTTTTTGG-ATTTCAGTGTTCATAGAACAAGCATTTGA
GCTCGGAATTAGAAGAACATTTTCATAATTTAGCCGATTTATTTTTTGAGACAA--------------------------
-----------------------TCAAAATCGAGCCGAGTGGAAACACTTATTATTGAGCCTACACTGAGTGGCTTTTTG
TAGGCTCAATTACAATTCGGCCTCGAAAGGCCCAAAATCAAGCCCAAGTCCAACAT------CGG----------AGCAG
CCTCCAGCCACCTTATCGTCTCCCCCCTCGGGTTCTATCCAAGGCAGAAGATTCCGGTGGGAAACACACGCACCTCCTCG
TCGGGCGAGCGCAGCAGAAATGGCGACCCTCTCCATGGTCTCCGGCCCCGTAGCCACCTCGTCCCTCCCCCTTTCCACCC
GCCGCCGCGCCTCCTCCGTCTCCTTCCCCGCCCCCAAGGTGAGCACCGCCGCCCTCTTCCTCCCCTTCCTCCCCTTCCCT
TTCGTGC---ACGACCCCTTGGGAAGGAGCTAGTGCCAGTCGAGTACGCTACTAGGTCTCGGCACACACCGCTTGCGTTG
TCTGTCTCTCTGTATGTGTAGTTCCAT-TGATATGCCCGGGATGCTGGAAGAATGGGGGTGAGCTGGTGTCTGTGTGGGT
GCTTGCTTGG----------------GAACCATGAATGTCCTAGCACATTTTGACTGATAATGTACAATTTTTCTTTGCA
CATCAATGTGAATGTTATAGGGAT-GGTTCTTTGTTATTTTTCTTCGC--TATATGTCCCTTTATATGTGTTTACAGAGA
AGATATTCTTTGATATGTAGATGTGTGTAGG-TGACTGTTTTATGGTTTTGATTGATTCTTCTGTTTTTTTGGAACTTG-
--ACAGAAGGGCGGCATTGGCCATGGTGGCCTGCGGATCGAGTGCATCCGTATCGGTGGTGTTGAGATCCCAAACCACAA
GAGGGTGGAGTACTCGCTGCAGTACATCCATGGCATCGGACGGAATCGCTCCCGCCAGATCCTTTTGGACCTCAGTTTTG
ATAACAAGGTCACCAAGGACCTCTCCGAGGAGGAGGTCATCACGCTCCGAAAGGAGGTCACCAAGTACATGATTGAAGGA
GACCTTGTAATTGCTCTCATCCCTTTGCTAAT--------AGGAGTATGATTTATTCCATTCCATGTTGTTACAATAACA
ACGCCGTCATGAT--ATTCTATTAGAGGCTTATATAGGACCTGTTTA--------GTTCTTCCGACATTTATTTAAAACA
CG-CATTTCACTGTTATAATGGTAACATCTACAAAAGGTATAAAAGTAGCATCTTCAAAAGATATGAAAATACTGAATAG
TGTCATGTTTAGAATTTATCCCATGTTGTTATGATAACTATGCCATCAGGATATTCTATTAGAGGCTTAGAATTAATTTG
CTACTTGCTAGGACATGTTTAGTTCTCTCCATGATTCTTCG---------------------------------------
-AAAATGAACTGAACATTGCCCCCCAATGCTTTTACAGAAACGGTTCAACCGTGTGGCAATCGAGAGGATGAAGGAGATC
CGGTGCTACAAGGGCATCCGGCACAAGCTCGGCCTCCCGGTCCGTGGCCAGAGGACAAAGAACAACTGCAGGACACTCAA
GGGGAAGAGGGCTTCCGTCGCCAAGAAGAAGTCGGCTTCGTCCTCCGACGAATAAGTGACATTGCCATGTGTATTTACCT
CCTGTTTGGTTTTTGTGAGCTACATCACGACGCTACTACCGTTTGTTGCTCCGGCTCAAGTTTCCATGCCGTCGTAGATG
AATTATATTACGGGGATATGGTCGGATGCTGCTGCAGAGTTTATAGTCATGACATCTCTTCTCTTATATGCATTGATGGT
AAATCATCAAGGTTTTTTTCCGATAAAGGGTAAATCATCAAGGTTACATGCGCGTTTCGTTCCAAGCACAAATGTTTTCT
GAACACATATTTTTTTTCTTTTGTCGCATGTCTGCTTGATGCAAAGACAGGTCAACCGGCTACCGATGACTGGATTAGCT
TAGACACCAGTGGTTGTAGAAT---TTTCCGATTGCCATTGCAAGATTATGCTGTGCAGTCATTTTGTTTGCAAGCTAGA
CAGAGGAGCTCCAGTGGTAGCTCAGTAATGTGACACTGTCAGGTTTGATTGCTAGTTTCCTACTGTACCAGATACAAAGT
TAAGTATG---TCATGCAA-----AAATCCAAGGCACCGAAAACCTCTGATTTTGGGATGAATTTGGGGTGTAGCAGTAG
TAATTTTGTGCAAAGTTCAGACATCTA---CTTCTGAATTTGACCGACAATGCGAGCTC---GACGTCCGGCTGCCACCA
CCCCACGCGCTATACCGACCACTCAAAAACCCCGCGGCTCCTTCCGTCGAGAAAAGACGGACACGGCTGCGGCTGCAACG
CACACACAAAAATCCCTCCCGTGCC-----------CCGTGGCCATGGCGCTGGTCTCGCTCTCGCTCTCGCCCCCGTGC
GCGCCCGCCGCCTCCTCGTCTTCCAGCCACCTCCTCACGCCGCCGTCGCTCGCCGGCGGCAGCGGTAGCATCAGGAGGGG
AGGGCCACGGGGCAACGCCGGCCTCGCTCTGACGCTGCCGGCCGGGCGTCGGGGTCGGGAGTGGAGGGCGCCGGTGTCGT
CCTTCTCCTCCTTCCTGCCGTCCTTCTTCACGGGGAGCAAGAAGAAGGAGGAGGAGGACGCCAAGAAGGCGGCGACGCTC
AAGGAGGAGCTGCTGGCG
>chr4B_1
CAGCGTGTACTAGCCTCTCTTTTTTCGCCTTTTCTTTTTCCTTCCCTATATATGTATACCTATTTAATTTAGCTGTAAAG
ATGTAAGAAACGGAATGGCTCCCTTAAAAGTCGGTATTACGCAATAAAAAAGGCGCTATT-GCTGTGTCTGCTTCCCTGT
TGTTCTGAAGTTGCAGTTATCTTTGCTATCTGATTTCCAAGCGCGAGTATCCAAGGATTTTCTACTAGCAGCCTGGCCAT
GCTGTCATTACATTTTTGTTTGGCT---------------------AAATTTTGTTTAGATATGTGGTGTGGTTATTTTT
TTTAGTGGAATGTACATGATGGCTATAATTCC------------------------------CTCCTTTTTTTAGCTCTA
CAGAATGGTTATAATTGAGGGATATGGAGTTTCTAAACTG-GAGCTCAAATGTACCCTTGTGAACAGTATAATCACGAAA
AAAATGATGTTTTCAAAAATTCTGACTTTTTTGGCAACAAATGTTGTTGAATTTTCTACATACGTGTGAATTTGTTGAAG
AAAACTATTCACGA--------------AAAAACAAATTCGATGCTCCGAAAAGATTTTCTGAAAGCATTTTTTAGTGTT
GATTTGTTATTTTTGCCCGGACCTCCAAGAATGTGATTTCATCATTAAAATTTGCATGCATGCAAAGGA---TATGCATT
TTTTGTTAAAAAAATCAGA-AATTTTAAATTTATTTAATTATTTTTTTGGCATTTTAGTGTTCATAGCAGAAGCAATTGA
GCTTGGAATT---------------------------TTTATTTTTTTTGAGATTTGATTTTAGAATCAACACTTTCACA
ATATATTTTTGGGCAAAACAC-TTCACAATTGAGCCGAGCCGAAACTCCGCGTGGCTTTTTAGGCCT-------TTGTAG
TAGGCTCAGCGACACTTCGGCCTCGAAAGGCCCAAAATCAAGCCCAAGCCCAAGCCCAAAGCCCAATACCGGAGCAGCAG
CCTCCAGCCACCTTATCGTCTCCGCCCTCGGGTTCTATCCTGGACAGAAGATTCC--------ACACACGCACCTCCTCG
TCGGGCGAGCGCAGCAGAAATGGCGACCCTCTCCATGGTCTCCGGCCCCGTCGCCACCTCGTCTCTCCCCCTCTCCACCC
GCCGCCGCGCCTCCTCCGTCTCCCTCCCCGCCCCCAAGGTGAGCACCGCCGCCCTCTTCCTCCCA---------TCCCCT
TTCGTGC---ACGACCCCTTGGGGAGAAGGA------------------------------GCACACGCCGCTTGCGTCG
TCTGTCTCTGTGTC--TGTAGTTCCAC-TGATATGCCCGGGATGCTGAAAGAATGGGGC-GAGCTGGTGTCCGTTTCTGT
TTCTCTGTGGGTGTTGAACTCCTTGTGAACCATGAATGCCCTAGCACATTTTGCCTGATAATGTAGTGA-TTTCTTTGCA
CATCGATGTGAATGTTACAGGGATGGGTTATTTGTTATTTTTCTTCGCCATATATGTCCCTTGATATGTCTGTACAGAGG
AGATGTTCTTCCATATGTAGATGTGTGCAGGGTGATTGTTTTGTGGTT----TTGGTTCTTCTGTTTATTGGGGATTTTA
TTACAGAAGGGAGGCATTGGTCACGGCGGCCTGCGGATCGAGTGCATCCGTATCGGTGGTGTTGAGATCCCAAACCACAA
GAGGGTGGAGTACTCGCTGCAGTACATCCATGGCATCGGGCGGAACCGCTCCCGCCAGATCCTTTTGGACCTCAGCTTCG
ACAACAAGGTCACCAAGGACCTCTCCGAGGAGGAGGTCATCACGCTCCGTAAGGAGGTCACCAAGTACATGATTGAAGGA
GACCTTGTAAG-GCTCTGACCCCTTTGCTAACACTCCGTAAGGAGTATGATTTATTCCATTCCATGTTGTTACAATAACA
ACACCGTCATGATACATTCTATCAGAGGCTTAGCTAGGACCTATTCA--------GTGCTTCCCACATTTCTTTAAAACA
TG-CATTTCACTGTTATAATGGTAACATCTCCAAAAGGTATAAAAGTAGCATCTCCAAAAGATATGAAAATACTGAACAG
TGCCATGTTTAGAATTTATCCCATATTTTGATGATAACTATGCCATCAGGATATTCTATTGGAGGCTTATAATTAATTTG
CTACTTGCTAGCAGATGTTTAGTTCTCTCCATGGTTCTTCA---------------------------------------
-AAAATGAACTGAACATTGCCCCCCAATGC-TTTACAGAAACGGTTCAACCGTGTGGCGATTGAGAGGATGAAGGAGATC
CGGTGCTACAAGGGCATCCGGCACAAGCTCGGCCTCCCGGTCCGTGGCCAGAGGACAAAGAACAACTGCAGGACGCTCAA
GGGGAAGAGGGCTTCCGTCGCCAAGAAGAAGTCGGCTTCGTCCTCCGACGAATAAGTGACACTGCCATGTGTATTTGCCT
CCTGTTTGGTTTTTGTTTGCTACATCACGGCGCTACCACCATTCGGTACTCCGTTTCAAGTTTCCATTCCGTCGTAGATG
AATTGT-----GGGGATATGGTCGGATGCTGCTGCAAAGTTTATAGTCATGACATCTCTTCTGTTATATATGCACTGATT
C-----------------------------TAAATCATCATGGTTACATGTGTGTTTCGTCCCAAGCACAAATGTTTTTT
GCACACGTATCTTC------------------------------------------------------------------
----------------------------------GCCGTTGCAAGATTATGTTGTGCGGTCATTTTGTTTGCAAGCTAGA
CAGAGGAGCTCCAGTGGCAGCTCGGTAATGCG--ACTGTCAGGCTTGATTGC----------------------------
---CACACAAATCATGCAAAAATTAAATCCAAGGCACCGAAAACCTTTGAATTTGGGGTGAATTTGGGGTCTAGCAGTAG
CCAATTTGTGCAAAGTTCAGACATCTG---CTTCTGAATTTGACCGACCATGTGAGTTATTAGACGTCCGGCTC---CCA
CCCCACGCGCTATACCGACCACTCAAAAACCCCGCGACCCGTTCGAGC------------ACACGACTGCGGCTGCAACG
CTCACACAAAAATCCCTTCCCTCCCTCGCTCCCGTGCCGCGGCCATGGCGCTCGTCTCGCTCTCGCTCTCGCCCCCGTGC
GCGCCCGCCTCCTCGTCTTCCTCCAGCCACCTCCTCACGCCGCCGTCGCTCGCTGGCGGCAGCGGTAG---CAGGAGAGG
AGGGCCACGGGGCAACGCAGGCCTCGCGCTAACGCTGCCGGCCGGGCGTCGGGGTCGGGAGTGGAGGGCGCCGGTGTCGT
CCTTCTCGTCCTTCCTGCCGTCCTTCTTCACGGGGAGCAAGAGGAAGGAGGAGGAGGACGCCAAGAAGGCGGCGGCGCTC
AAGGCGGAGCTGCTGGCG
>SNPs
-----------------S------------------S--S--------------------------------S-------
-------------------------S------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------------SS---------------------------------------
-----------------------S----S---------S-----------------------------------------
------S---------SS-SS-S-S---------------------S---------------S------------S----
------------------------------------------------S--------------------S-S-S------
--------S---------------------------S----S-----S-----S--S-SS---S----------------
-----------S-------------S-----------------------S---S-------------S-----------S
----S----S---------S-S------------S-------------------------SS------------------
------------------S---------------------------------S------SS-------------------
-------------------------------------------------------S---------------S--------
------S---S----------------S----------------------------------------------------
----------------------------------------------------------------------S---------
-------SSS----------------------------S--S---S----S-----------------------------
----------S--S------S--S--SS------------------------------S----S-----S--S-------
S--------------------------------------S-S-------------------------S------------
--S----S-------------------------S---------S--S-S-------------S-S-----------S---
S--S-------------------------------------S--------------------------------------
--------------------------------------------------------------------S-----------
-S------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
---------------------------------------------------S----------------------------
S----------------------------------------------SSSSSSSS-------------S---------S-
-SS----------------S--S--SS-----------------------------------------------------
----------------S--S-----S-----SS-----S-----S---S-S-----------------------------
-----------S--------S----------SS----S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S----S--------S-S-SS--S--------------------------------S------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-----------------SS----------------S----------------S----------------S----------
--------------S--------------------S-----------S---S----------------------------
S--S-------------------------------------------S-------------------S-S----------
---------------------------SSS------------------SSS------S-----S---------S------
--SSSSS--SS---SS-SSS-SSSS-----S-------------------S---------------S-------------
----------S------S------S----S----------------------------S----SSS-SSSS-S-S-SSSS
SSS--S-------------------------------S---------------------------------SSSS-S---
---------------------------SSS----------------------------S---------------------
-------------------------------------------------------------------------------S
S--------------S-----------S----------------------------------------------------
-------------------------S------------------------------------------------------
-------------------------------------------------S------------------------------
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>forward_979
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-------------------------------------------------------------------------------G
TAGGCTCAGCGACACTTCA-------------------------------------------------------------
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>reverse_2849
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------------------------------------------------GCCCAACCAGCTACTGATGA------------
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