>input_sequence_56444
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---------------------------------------------------------AAGCTCACCCACTCATCTGCTGC
CGCTGCTTCAGAGAAAACACCGCTCTGCACACCACCAATTCACACCACCCGTTGGGGGCGTTACCTTCCAAAACTCCTGC
AGCCAATGGCGTTACGCCTCTCCGTCTCCTCGCCGCAGAGCACGGCCTCCTCGCCGGCCATCTCCTCATGCCGCCCCGCC
GCCTGCGGCCGCTTCCTGGCCTGCGTGGCGGCTTCTCAGAAGAGGAGCCTGATGGCGGTGTCTGCCTCTGATGGGAGAGG
AGTGGCTCCGGTGAAATCCGGCGGCTTGGAGACAGCCACGACGGGAGCCGGCGAGGTGGAAGCGCCCACAGCGGCGGTGG
CGGTGACCGGGCAGGTCACGGAGGTCTGCAAGGACACCTTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTC
CTCGACATGTACACCCAATGGTACTGTGCAAGCCCCATGCATTTCTCCGTTTCAGCCCTTCTTCACTGATGAACTACTGT
CTCAATCTCACATATTCCTGACATACAAGCTAGGCCAGATTATTTAGAGATGCATGGGTATTGTTATAATCAAGACCAGA
TGTCATCCCGCAGCAGAGTGATGAAACTTCCTTGTCTGCAGGTGCGGCCCTTGCAAAGTTATGGCACCAAAATTCCAGGA
GATGTCTGAGAAGGACCACGACGTCGTGTTCCTCAAGCTTGATTGCAATCAAGACAACAGGGTATGTTAGAAACTGGAAC
CATCTTGCTGTCTCATGTGTATCTTGTATTTTGTTTGAATATATCATGGTAAGCTTCTTGGTG-----CTTGTCAATTGT
AGCCTCTTGCAAAGGAGCTTGGCATAAGGGTTGTACCAACATTCAAGATTTTCAAGGATGGGAAGGTTGCAAAGGAGGTC
ACTGGTGCGAAGATTGATGAATTAGCGCGTGCGATTGAGGAAGTGAAGTCAAGCTGAGCAATTCCCTGGAAAGAAATGCA
GCAGTTAGCATGCTATCACTAGTGTACACTATGGGATGAAAACAGCCTTTGTGGAAGTGGATAATCACCGTGGAGAAAAA
CAGTTATTATAGTTCTTCTGCTTATGATGATTTACCAATCGTTCTGGACAATATACACCCATCCATGTGGAGTTTATGCT
GTAAATAGTCATTTCAATCTTTCTGAAAATACGGTTGCTTCCTGATCTCACTAATTTGCAGGCATACCAAGCATGTTTTG
CAAATCATAT-TAAAAAAATCTTGTTCTTAC-------------------------------------------------
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---------------
>chr3B_1_TraesCS3B01G453600
GGTTGGGCACGGCCGAGCAAACACTTGGAAGTTGTGGTC-GCAACGAA---GGAGCATCAGCCTCTGGCTCGCCCAAGCT
CACCAGCCACGCAGTTGCTGCCGCTGCTCGACCTATCCGTGACAGTGAGGTTGCTGCCGCTCCGCTACCGTCCGCAGTGG
CTACATGTTTTTCTACCT-TGCGTCGCGATCGTAGCCGCACGTCGCAGGATCTCTGGCGTCTCCCGGTAAAATATCTCCG
GCCGGAACTTTCCATTGCTTCTCTGAAGAAGCTAGCGGAGCCACAGACATTGCCATCCAAGCTAGATTTTGTGCAAGCTG
TATAGGTTTGCTGGCGAGACAGGTAGAATTCGCACAACGTGGCGCACGCGCGCGGTACAATCGCGATCTATACTTCTGCT
AGAGAGAGAGGCCAGTGTTTTTCTCTCGTCTGATA-------CTGATTCTTTTGGAGATGCTGGTTACTTTGTTCACTGG
GGAGTGCAGAGCTGCCCTGAATTACGCTGCATCATGAAAGTGCC-TTTTTTTTGGAGGAAGCATC----TGAAAGTAATT
GAAGCAGAACGTACTAGATGAAGACAAAGCAGGCGTCGTAACTTTACTCGTTTCAGTCAGAAATTGAAGGAGAAGCATCT
AAGATGCTGATTCCATGTACTCCTAATATCCATCGTGATACCTCAGGAGTCATCAACTAGTCACGGTACACACATGTGGC
GACGACCTGTGGCCGTGTGTGGGCTCATAAGGTCCGTAGCCCACAAGTCGCCGGTGCAAGTGTCATATACAGATGTCACA
CACGCTGTCCGTGGAACAGATGGAACAAGGAAACCGAGCAGGGCACCACACGATCAGATCTTCCGGTTAGCCAAAACACC
CTCGGTGCTCACAAGTACAGGATCCAGCGTCACCACAAAACCGCAGGAACTTCCGAGGGCAGCCACGTCCATTCTCAGAA
GAAACCATCTCTGCTCGATAGCCGATATATACCACCAAGCAACCGGGATTTCCCCTCAAGCTCACCCACTCATCTGCTGC
CGCTGCTTCAGAGAAAACACCGCTCTGCACACCACCAATTCACACCACCCGTTGGGGGCGTTACCTTCCAAAACTCCTGC
AGCCAATGGCGTTACGCCTCTCCGTCTCCTCGCCGCAGAGCACGGCCTCCTCGCCGGCCATCTCCTCATGCCGCCCCGCC
GCCTGCGGCCGCTTCCTGGCCTGCGTGGCGGCTTCTCAGAAGAGGAGCCTGATGGCGGTGTCTGCCTCTGATGGGAGAGG
AGTGGCTCCGGTGAAATCCGGCGGCTTGGAGACAGCCACGACGGGAGCCGGCGAGGTGGAAGCGCCCACAGCGGCGGTGG
CGGTGACCGGGCAGGTCACGGAGGTCTGCAAGGACACCTTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTC
CTCGACATGTACACCCAATGGTACTGTGCAAGCCCCATGCATTTCTCCGTTTCAGCCCTTCTTCACTGATGAACTACTGT
CTCAATCTCACATATTCCTGACATACAAGCTAGGCCAGATTATTTAGAGATGCATGGGTATTGTTATAATCAAGACCAGA
TGTCATCCCGCAGCAGAGTGATGAAACTTCCTTGTCTGCAGGTGCGGCCCTTGCAAAGTTATGGCACCAAAATTCCAGGA
GATGTCTGAGAAGGACCACGACGTCGTGTTCCTCAAGCTTGATTGCAATCAAGACAACAGGGTATGTTAGAAACTGGAAC
CATCTTGCTGTCTCATGTGTATCTTGTATTTTGTTTGAATATATCATGGTAAGCTTCTTGGTG-----CTTGTCAATTGT
AGCCTCTTGCAAAGGAGCTTGGCATAAGGGTTGTACCAACATTCAAGATTTTCAAGGATGGGAAGGTTGCAAAGGAGGTC
ACTGGTGCGAAGATTGATGAATTAGCGCGTGCGATTGAGGAAGTGAAGTCAAGCTGAGCAATTCCCTGGAAAGAAATGCA
GCAGTTAGCATGCTATCACTAGTGTACACTATGGGATGAAAACAGCCTTTGTGGAAGTGGATAATCACCGTGGAGAAAAA
CAGTTATTATAGTTCTTCTGCTTATGATGATTTACCAATCGTTCTGGACAATATACACCCATCCATGTGGAGTTTATGCT
GTAAATAGTCATTTCAATCTTTCTGAAAATACGGTTGCTTCCTGATCTCACTAATTTGCAGGCATACCAAGCATGTTTTG
CAAATCATAT-TAAAAAAATCTTGTTCTTACAGATGTAGGCATCGTGACACTGAGCTAAGATTGCTTTACTCAATTCATT
CCTATTATACCATGT-AACCATAGCTTAAATATCTATAAAGTGTCTC-ATAACTTCAAATATTAGCCATTGGATATGCTC
TATCAAACGGTT--GAGATGGCAATCCGAACATTATCATCTGTTGAATAAAGTTTTCAACTCATAAGATTTTGCACGTTG
CCTTCTAACTGAACCCCAACTCTATCATCTGATGTGTTCTAGAAACATCTTTCGCCATGCTTATCTGATTCTCTAATAAA
ATAAGAGACTAAGAACAATCTGGATTCTAGAGGGGTAAGAACCAAGTTGGGATAGAGTTGGATCTTGCCAATATGATTCC
AGGAAAGGAAATAAATGTCAGAGTGTATTTTTCCATGCTGTTATATATCTAAATGGAGTGCAAAGCAGGTACATTTTACT
AGTTTTGTTAAAAAAATACATATCTAAGATGCAGAGCTTAAACTGCT-----------TGTGGAGGTTACAAACTTATTA
TAGAAAAGTAACTCTGAATACCTACGCAAATCAATATAAATTAACCATGGTGAGTTCCAAGTATAAAATGAGCTGTGAAG
AAATGAAGGTACCTTGCTAGCATCCCAACTTAGTTGCAGTCTTGATAGTTCAATTAGCCATGTTTTCTGCCTC---AGCC
TGCACCGATTTAACATATA-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCAAACAGAAATGTTTGTGGTGCTTTTCAGCTCCTCAAAAGACATCTTGCCTTGC
TCCCTCTGCTGATCCTAAAACCAACTAGACCCTGGCTGTTTGAAGGGTAATTTTGTTTTCATCAGCGACCGAACTCTTTC
TGCCTCCTCCCATTGTCCTCTCCCAGCATATATACTCGACAGCAGTATATAGTTCCCAGTATTTCGAGGTTCCAACTCAA
AAAGCTTATTTGCAACAACTTCAGCAATCTCAGCATTGTCGTGCGTCTTGCACGCACTAAGCAGGGCACCAAGAGCACCT
GGATGGGGCCCCATC
>chr3A_1
GGTCGGGCACCG--GAGCAAACACTTACCACTGGATGGTGGCAATGGCAACGGAGCATCAGCCTCTGGCTGGCCCAAGCT
CACCAGCCACGCAGTTGCTGCCGCT------------------------------------CCCCTACCGTCCGCGATGG
TTACGTGTTTTTCTACTTCTGCGTCGCGATCGTAGCCGCACGTCGCAGGATCTCTGGCGTCTCCCGGTAAAATATCTCCG
GCCAGAACTTTCCATTGCTTCTCTGAAGAAGTTAGCGGAGCCACAGACTTTGCCATCCAAGCTAGATTTCGTGCAAGCTG
TGGAGGTTTTCTGGCAAGACAGGCAGAATCCGCACAACGTGGGGCACGCGAGCGGTACAATCGCGATCTATACTTCTGCT
AGAGAGAAAAGCCAGTGGTTTCATCTCGGCTCTCGGGTGATGCTGATTCGTTTGGAGATGCTGGTTACTTTGTCCACTGG
AGAATGTAGAGCTGCCCTGAATTACGCTGCATCACGAAAGCACGTTTTTTTTTGGAGGAAGCATCATCATGAAAGTAATT
GAAGCAGAACA---TAGATGAACACAAAGTAGGCGAGGTAACTTTACTCGTTTCAGTCAGAAATGGAAGGAGAAGCATCT
AAGATGCTGATTCCATGTACTCCTAATACCCATCGTGATACCTCAGGAGTCATCAACTAGTCACGATACACACATGTGGC
GACGACCTGTGGCCGTGTGTGGGCTCATAAGGTCCGTAGCCCACAAGTCGCCGGTGCAAGTGTCACATACAGATGTCACA
CACGCTGTCCGTGGAACAGATGGAACAAGGGAACCGAGCAGGGCACCACACGATCAGATCTTCCGGTTACCCAAAACACC
CTCAGCGGTGACAAGTACAGGATCCAGCGTCACCACAAAACCGCAGGAACTTCCGAGGGCAGCCACGTCCATTCTCAGAA
GAAACCATCTCTGCCTGATAGCCGACATATACCACCAAGCAACCGGGATTTCCCCTCAAGCTCACCCACTCATCTGCTCC
AG----------GGAAACACCACTCTGTAGACCACCAACTCACACCACCCGTTGAGGGCGTTACCTTCCAAAACTCCTGC
ATCCAATGGCGTTACGCCTCTCCGTCTCCTCGCCGCAGAGCACGGCCTCGTCGCCGGCCATCTCCTCATGCCGCCCCGCC
GCCTGCGGCCGCTTCCTGGCCTGCGTGGCGGCTTCTCAGAAGAGGAGCCTGATGGTGGTGTCTGGCGCTGACGCGAGGGC
AGTGGCTCCGGTGAAGTCGGGCGGCTTGGAGACGGCCACGACGGGAGCTGACGAGGTGGAAGCGCCCACAGCGGCGGTGG
CGGTGACCGGGCAGGTCACCGAGGTCTGCAAGGACACCTTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTC
CTCGACATGTACACCCAATGGTACTGTGCAAGCCCCATACATTTCTCCGTTTCAGCTCTTCTTCACTGATGAACTACTGT
CTCAGTCTCCCATATTCCTGACATACAAGCTAGGCCAGATTATTTAGAGATGCATGGGTATTGTTATAATCAAGACCAGA
TGTCATCCCACAGCAGAGTGATGAAACTTCCCTGTCTGCAGGTGCGGCCCTTGCAAAGTTATGGCACCAAAATTCCAGGA
GATGTCTGAGAAGGACCACGACGTCGTATTCCTCAAGCTCGATTGCAATCAAGACAACAGGGTATGTTAGAAACTGGAAC
CATCTTGCTGTCTCATGTGCGTTTTGTATTTTGTCTGAATATATCATGGTAAGCTTCTTGGTG-----CTTGTCAATTGT
AGCCACTTGCAAAGGAGCTTGGTATAAGGGTTGTACCAACATTCAAGATTTTCAAGGATGGGAAGGTTGCAAAGGAGGTC
ACTGGTGCGAAGATTGATGAATTAGCGCGTGCCATTGAGGAAGTGAAGTCAAGCTGAGCAATTCCCTGGAAAGAAATGCA
GCAATTAGCATGCTATCACTAGTGTACACTATGGGATGAAAACAGCCTTTGTGGAAGTGGATAATCACCGTGGAGAAAAA
CAGTTATTATAGTTCTTCTGCTTATGATGATTTACCAATCGTTCTGGACAATATACACCCATCCATGTGGAGTGTATGCT
GTAAATAGTCATTTAAATCTTTCTGAGAATACGGTTGCTTCCTGATCTCACTAATTTGCAGGCATACCAAGCATGTTTTG
CAAAACATAT-TTAAAAAATCTTGTTCTTACAGATGCAGGCATCATGACACTAAGCTAAGATTGCTTTACTCAATTCATT
CCTATTATACCATGTGAACCATAGCTTAAATATCTATAAAGTGTGTCAATAACTTCAAATATTAGCCGTCGGATATGCTC
TATCAAACAGTTGAGAGATCGCAATCCGAACGTTATCATCTGTTGAATAAAGTTTTCAACTCATAAGATTTTGCACATTG
CCTTCTAACTGAACCCCAACTCTGTCATCTGATGTGTTCTAGAAACATCTTTCCCCATGCTTATCTGATTCTCTAATAAA
ATAAGAGACTGAGAACAATCTGGATTCTAGAGGGGTAAGAACCAAGTTGGGATAGAGTTGGATCTTGCCAATATGATTCC
AGGAAAGGAAATAAATATCAGTGTGTATTTTTCCATGCTGTTATATATCTAAATGGAGTGCAAAGCACGTACAATTTACT
GGTTTTGTT--AAAAATACTTATCTAAGATACAGAGCTTAAACTGCAATAGCAGTTTGTGTGGAGATTACAAACTTATTA
TGGAAAAGTAACTCTGAATACCCACGCAAATCAATATAAATTAACCATGGTGAGTTCCAAGTATAAAGTGAGCTGTGAAG
AGATGAAGGTACCTTGCTAGCATCCCAACTTAGTTGCATTCTTGATAGTTCAATTAGCCATGTTTTCTGCCTC---AGCC
TGCACCGATTTAACATATA-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GCAAACAGAAATGTTTGTGGTGCTTTTCAGCTCCTCAAAAGACAACCTGCCTTGC
TCCCTCTGCTGATCCTAAAACCAACTAGACCCTGGCTGTTTGAAAGGTAATTTTGTTTTCATCAGCGACCGAACTCTTTC
TGCCTCCTCCCATTGTCCTCTCCCAGCATATATACTCGACAGCAGTATATAGTTCCCAGTATTTCGAGGTTCCAACTCAA
AAAGCTTATTTGCAACAACTTCAGCAATCTCAGCATTGTCGTGTGTCTTGCACGCACTCAGCAGGGCGCCAAGAGCACCT
GGATGGGGGCCCATC
>chr3D_1
GGTTGGGCACAGCCCAGCAAACTCTTAGCACTTGATGGTGGCAACGAA---GCAGCATCAGCCTCTGGCTCGCCCAAGCT
CAGCAACCACGCAGTTGCTGCCGCTGCCGGACCTATCAGTGAGGTAGCTGCTGCCAG----CCGCTACCGTCCGCGATGG
ATACGTGGTTTTCGACCT-TGCGTCGCGATCGTAACCGCACGTTGCAGGATCTCTGGTGTCTCCCGGTAAAATATCTCCG
GCCGGAACTTTCCATTGCTTCTGTGAAGAAGCTAGCGGAGCCACAGACATTGCCATCCAAGCTAGATTGTGTGCAAGCTG
TAGAGGTTTTCTGGCAAGACAGGCAGAATTCGCACAACGTGGCGCACGCGCACGGTACAATCACGATCTATACTTTCGGT
AGAGAGAGAAGCCAGTGGTTTCATCT-------CGGGTGATGCTGATTCGTTTGGAGATGCTGGTTACTTTGTTCACTGG
AGAGTGCAGAGCTGCCCTGAATTACGCTGCACCATGAAAGTATATTCTTTTTTGGAGGAAG---CATCATGAAAGTAATT
GAAGCCGAACGTACTAGATGAAGACAAAGCAGGCGCAGTAAATTTACTCGTTTCAGTCAGAAATGGAAGGAGAAGCATCT
AAGATGCTGATTCCATGTACTCCTAATATCCATCCTGATACCTCAAGAGTCATCAACTAGTCACGGTACACACATGTGGC
GACGACCTGTGGCCGTGTGTGGGCTCATAAGGTCCGTAGCCCACCAGTCGCCGGTGCAAGTGCCATACACAGATGTCACG
CAAGCTGTCCGTGGAACAGATGCAACAAGGGCACCGGGCAGGCCACCACACGATCCGATCTTCCGGTTACCCAAAACACC
CTCGGTGCTCACAAGTACAGGATCCAGCGTCACCACAAAACCGCAGGAACTTCCGAGGGCAGCCACGTCCATTCTCGGAA
GAAACCATCTCTGCCGGATAGCCGATATATACCACCAAGCAACCGGGATTTCCCCTCAAGCCCACCCACTCATCTTAG-C
AG----------GAAAACACCACTCTGTACACCACCAACTAACACCACCCGTTGGGGGCGTTACCTTCCAAAACTCCAGC
ATCCAATGGCGTTACGCCTCTCCGTCTCCTCGCCGCAGAGCACGGCCTCCTCGCCGGCCATCTCCTCATGCCGCCCCGCC
GCCTGCGGCCGCTTCCTGGCCTGCGTGGCCGCTTCTCAGAAGAGGAGCCTGATGGTGGTGTCCGGCTCTGACGGGAGGGG
AGTGGCTCCGGTGAAGTCGGGCGGCTTGGAGACGGCCACGACGGGAGCCGACGAGGTGGAAGCGCCCACAGCGGCGGTGG
CGGTGACCGGGCAGGTCACGGAGGTCTGCAAGGACACCTTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTC
CTCGACATGTACACCCAATGGTACTGTGCAAGCCCCATACATTTCTTCGTTTCAGCTCTTCTTCACTGATGAACTACTGT
CTCAATCCCACATCTTCCTGCCATACAAGCTAGACCAGATTATTTAGAGATGCATGTATATTGTTATAATCCAGATCAGA
TGTCATCCCGCAGCACAGTGATGAAATTTCCTTGTCTGCAGGTGCGGCCCTTGCAAAGTTATGGCACCAAAATTCCAGGA
GATGTCTGAGAAGGACCACGACGTCGTATTCCTCAAGCTCGATTGCAATCAAGACAACAGGGTATGTTAGAAACTGGAAC
CATCTTGCTATCTCATGTGTATCTTGTATTTTGTTTGAATATATCATGGTAAGCTTCTTGGTGCTTGTCTTGTCAATTGT
AGCCTCTTGCAAAGGAGCTTGGCATAAGGGTTGTACCAACATTCAAGATTTTCAAGGATGGGAAGGTTGCAAAGGAGGTC
ACTGGTGCGAAGATTGATGAATTAGCACGTGCGATTGAGGAAGTGAAGTCAAGCTGAGCAATTCCCTGGAAAGAAATGCA
CCAGTTAGCATGCTATCACTAGTGTACACTATGGGATGAAAACAGCCTTTGTGGAAGTGGATAATCACCGTGGAGAAAAA
CAGTTATTATAGTTCTTCTGCTTATGATGATTTACCAATCGTTCTGGACAATATACACCCATCCATGTGGAGTGTATGCT
GTAAATAGTCATTTAAATCTTTCTGAAAATACGGTTGCTTCCTGATCTCACTAATTTGCAGGCCTACCAAGCATGTTTTG
CAAAACATATATAAAAAAATCTTGTTCTTACAGATGTAAGCATCGTGACATTGAACTAAGATTGCTTTACTTAATTCATT
CCTATTATACCGTGTGAACCATAGCTTAAATATCTATATAGTGTCTTAATAACTTCAAATATTAGCCGTTGGATATGCTC
TATCAAACGGTTGAGAGATGGCAATCCGAACATTATCATCTGTTGAATAAAGTTTTCAACTCATAAGATTTTGCACGTTG
CCTTCTAACTGAACCCCAACTCTATCATTTGATGTGTTCTAGAAACATCTTTCCCCATGCTTATCTGATTCTCTAATAAG
AGATAGAAC--------ATCTGGATTCTAGAGGGGTAAGAACCAAGTTGGGATAGAGTTGGATCTTGCCAATATGATTCA
AGGAAAGGAAATAAATATCAGAGTGTATTTTTCCATGATGTTATATATCTAAATGGAGTGCAAAGCACGTACAATTTACT
AGTTTCGTT--AAAAATACTTATCTAAGATGCAGAGCTTAAACTGCAATAGCAGTTTGTGTGGAGATTACAAACTTACTA
TGGAAAAGTAACTCTGAATACCTACGCAAATCAATATAAATTAGCCATGGTGAGTTCCAGGTATAAAATGAGCTGTGAAG
AAATGAAGGTACCTTGCTAGCATCTCAACTTAGTTGCATTCTTGATAGTTCAATTAGCCATGTTTTCTGCCTATGTAGCC
TGCACCGATTTAACATATACTCCCTCCGTTCCTAAATATAAGTTTTTTTAGACATTTCAAATGGACTACAACATACGGAT
GTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTCATTTGTTGAAATCTCTAAAAAGACTT
ATATTTAGAAACGGAGGGAGTAGTAGCAAACAGAAATGTTTCTGGTGCTTTTCAGCTCCTCAAA-GACACCCTGCCTTGC
TCCCTCTGCT-ATCCTAAAACCAACTAGACCCTGGCTGTTTGAAAGGTAATTTTGTTTTCATCAGCGACCTAACTCTTTC
TGCCTCCTCCCATTGTCCTTTCCCAGCATATATACTCGACAGCAGTATATAGTTCCCAGTATTTCGAGGTTCCAACTCAA
AAAGCTTATTTGCAACAACTTCAGCAATCTCAGCATTGTCGTGTGTCTTGCACGCACTCAGCAGGGCACCAAGAGCACCT
GGATGGGGGCCCATC
>SNPs
----------S---------------S-S-S---SS-SS-----------------------------------------
---------------------------SS--------S----SSSS-SS-S---SSSSSSS--------------SS---
S---S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S------S-----S-------S--------------------------------------------------------
---------S-------S---SS-----S--SSSS--------------S------------------------------
S----------------------------------------S-S------------------------------------
-----------------------------------SS---------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--------------------------------------S----------
--------------------------------------------------------------------------------
--------------SS--------------------------------------------------------------S-
S-SSSSSSSSSS---------S-----S----------S-----------------------------------------
-S------------------------------------------------------------------------------
-------------------------------------------------------S--------S------S-----S--
---------------S--S--------------S----------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------S-----------------------------------------------------------------
----S---------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----------S---------------------------------------------------------------------
----------------S--------------------------------------------------S-----S------
---------SS--------S--------------------------S------------------S--------------
-S------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-S--------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------S---------------------
--------S------
>forward_123
--------------------------------------------------------------------------------
-----------------------CTGCTCGACCTATCCGTGAC-------------------------------------
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>reverse_1050
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---------AGAGAAAACACCGCTCTGCA---------------------------------------------------
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>forward_524
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------------------------CGCTGCATCATGAAAGTGCC------------------------------------
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>reverse_1479
--------------------------------------------------------------------------------
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--------------------------------------GCATTTCTCCGTTTCAGCCC----------------------
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>forward_1068
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--------CAGAGAAAACACCGCTCTGC----------------------------------------------------
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>reverse_3190
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---------------------------------------------------------------------TCTTGCCTTGC
TCCCTCTG------------------------------------------------------------------------
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---------------
