>input_sequence_56441
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-----------------------------------------------------------------------GCTTGGACT
GTTTGCCGTACGATGTCCTCCTCCTCCTCCACCCCAGCCTTTCCGCCGCAAGAGGGCGATGCCGAAACCAACGAGGAGCT
CTACGGGCAGTTCACCGAGCTGGCGTCCTCCTGGCCGTGCTCCGGGGGCCTCTCCAGGGCGAAACTGCTCTACCGCCATG
AGAAGGGCTGGTACAGCACCCTGCCTCCGATGGTCGGCGCGATGGTCGCCGACGCACGCTTCGCCGCGCGCCCCTCGGAC
ATCGTCGTCGCCACCATG-CCCAAGTCCGGCACCACGTGGATGAAGGCGCTCCTCTACTCCACGGTCCACCGGAGGGAGC
ACACCCCGGGCGGCC---CCGGCCACCCGTTCAACTCCCTCGGCCCGCACGACTGCGTCCGCCACCTGGAGTACCAGCTC
TACACGCGCAACAGGGTCCCGGACCTCGACGGGCTCCCGGACCCGAGGCTCCTCGCCACGCACGTCCCGCTCGCGTCGCT
GCCGAGGTCCGTCGCCGCGTCGGGGTGCCGGATCGTGTACGTGTGCCGCGACCCCAAGGACACCCTGGTCTCGACGTGGA
GCTTCGTGAACAAGTTCAGGGCCGAGGACGGGCTGGAGCCGATCCCGGTCGAGGCCGCCGCCGGCTACTTCTGCGACGGC
GTGTCGGCGTCCGGGCCGTACTGGGACCACGTCCTCGGGTACTGGCGCGCGCACCTGGCGAACCCCGAGCGGGTGCTCTT
CTTCCGGTACGAGGAGATGAGCCGGGACCCTGCGGCACACGTGCGGAGGCTGGCGGAGTTTGTCGGGCGCCCGTTCAGCG
C---GGAGGAGGAGGAAGACGGCGCGGTGGACGCCGTCGTCAAGCTGTGCTCGTTCGAGCACATGACCGGGCTCGAAGCG
ACCAAGAG-CGGCAAGACGGAGCTTGTGTTGGGCGCTGTGGAGAACAGCTCGTTCTTCCGGCGCGGCCTGGTCGGGGATT
GGGAGAACCATCTCTCGCCGGAGACAGCACGAAGGATTGACGCCATTACCGAGGCTAAGTTTAGGGGTTTCGGTCTCTCT
GTCTAGCCAGCATTCGATATCCACGTATCATTCAA---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TATTCGCATACGTGTGC
CGCTAGTATATGTCAACAAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GGAGTGGCATATTGTGTTGATATT--------------GAAATTGT
GGCCGCAAGTTTGGAATTATGGATTGGGGCCAGGCAGTACTGATTAGAGCATCTCTCCAACGCTAGCCCCATTTTAGAAC
-----AAGAAT-------------------------------AAATAGAGATGCTTATA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------
>chr2D_1_TraesCS2D01G372000
CCGCCGCCTCCTACGTCGTTAGATTGAGCCACAAATAGCCATCGGATCTCCCCGATGAGATGCATCGCCAATTGCAACAA
GGTAGTTGTTGCACAGCTCGCTCTGCAACAGTTGCTTTGTTGCAAACCACCAAAGTGCTAATTTGCCCGAAATTTTTATT
TTTGTCTTCAATTTC-----------------------------------------------------------------
-------TTTTTATAGCATAGATGATGTTATGGGAGGATTTTTGCAACATGAATAATGTTGCAG-ATTTTTTTTACTGAA
AAGATGATGGCTA---TGGTGTGAATCGAGAAATTTCTGCAACAGAGATGATGTTGCGCGGAAGGACTTTTGCAACAAGG
CCCTTGATGCGGAAA-GTATAAAAAAAACATCGTCGGCCGAAGCGAGGACGGACAGCGGACAGCGAGAGGGGAGGCCGAA
GCGGCGCAACTCGCCAATGGTGGCTGGAGCACAGCTCGGGCGAGCCGACGTAAGGAGACGGGGAA---AGGAGTTGGAGA
GGAAGAGGAGAGGAGAAAGGACGGCCAGCAGTGTCCACCGACGATCACCAGCGGCGGACTCAAGAGAGCGGCTTGTAGTA
GTGTGCAGGATGACTGGCTTGCTGCGGCACTTGTGGCGTGTGGC---CCTGGAGCACGGCTGAGAGGAAGACACGAAGAA
TAGATAAGGATAAGGACAAGGACGTAGTATGTTGCTCGGTCCATTTCACACAAGACACGTGTTGAACGTTGGAAGCGGCG
GACGCAGTGCC-------------GTGACGGAAATCTTTTCCCATTAAACTACG-AAATACAAGATATATAAGTATGGCA
ACATCACTGCCGTCTTGTTGTCTTGTTTGGAGACGAACGTGGCCAAATAATTTGATGTGGCAATAAGAAAATGAGCTGTT
----GAGTTTGTGTATACGCCGTGGTGGCAGCCACCACACAAGTTGTACCGGGAGCAATATGCTCCATGTGCATCGCCAC
TCTTCTAC--CTATTATAAGATGCACCTTATGCTACCGCCACCTTATCCCTGC--------TCATACCTTAGCTTGGACT
GTTTGCCGTACGATGTCCTCCTCCTCCTCCACCCCAGCCTTTCCGCCGCAAGAGGGCGATGCCGAAACCAACGAGGAGCT
CTACGGGCAGTTCACCGAGCTGGCGTCCTCCTGGCCGTGCTCCGGGGGCCTCTCCAGGGCGAAACTGCTCTACCGCCATG
AGAAGGGCTGGTACAGCACCCTGCCTCCGATGGTCGGCGCGATGGTCGCCGACGCACGCTTCGCCGCGCGCCCCTCGGAC
ATCGTCGTCGCCACCATG-CCCAAGTCCGGCACCACGTGGATGAAGGCGCTCCTCTACTCCACGGTCCACCGGAGGGAGC
ACACCCCGGGCGGCC---CCGGCCACCCGTTCAACTCCCTCGGCCCGCACGACTGCGTCCGCCACCTGGAGTACCAGCTC
TACACGCGCAACAGGGTCCCGGACCTCGACGGGCTCCCGGACCCGAGGCTCCTCGCCACGCACGTCCCGCTCGCGTCGCT
GCCGAGGTCCGTCGCCGCGTCGGGGTGCCGGATCGTGTACGTGTGCCGCGACCCCAAGGACACCCTGGTCTCGACGTGGA
GCTTCGTGAACAAGTTCAGGGCCGAGGACGGGCTGGAGCCGATCCCGGTCGAGGCCGCCGCCGGCTACTTCTGCGACGGC
GTGTCGGCGTCCGGGCCGTACTGGGACCACGTCCTCGGGTACTGGCGCGCGCACCTGGCGAACCCCGAGCGGGTGCTCTT
CTTCCGGTACGAGGAGATGAGCCGGGACCCTGCGGCACACGTGCGGAGGCTGGCGGAGTTTGTCGGGCGCCCGTTCAGCG
C---GGAGGAGGAGGAAGACGGCGCGGTGGACGCCGTCGTCAAGCTGTGCTCGTTCGAGCACATGACCGGGCTCGAAGCG
ACCAAGAG-CGGCAAGACGGAGCTTGTGTTGGGCGCTGTGGAGAACAGCTCGTTCTTCCGGCGCGGCCTGGTCGGGGATT
GGGAGAACCATCTCTCGCCGGAGACAGCACGAAGGATTGACGCCATTACCGAGGCTAAGTTTAGGGGTTTCGGTCTCTCT
GTCTAGCCAGCATTCGATATCCACGTATCATTCAA---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TATTCGCATACGTGTGC
CGCTAGTATATGTCAACAAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GGAGTGGCATATTGTGTTGATATT--------------GAAATTGT
GGCCGCAAGTTTGGAATTATGGATTGGGGCCAGGCAGTACTGATTAGAGCATCTCTCCAACGCTAGCCCCATTTTAGAAC
-----AAGAAT-------------------------------AAATAGAGATGCTTATACATTTTCAGCCTCTAAATATT
ACACTCAACTCTGATAGCAACCTTCATCTTCTACCCCCCATTTTTCTTACCTAAGAGTATCTTTAGCAGATCTGCTAT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATCCTCGCCG
CC-CCTTATAATTCCGACGGTTTTAGAGTTTTTGACCTTTTTCGGGCTTGAACAAATCCCGTAAAAATGGCCCAGCCCGT
AAAAAATATGCAGGCGGCCCACAAATCCCCCCTCCGCCGTTGAATGTATGGGGTCAGGGCGTTTTAGGGTTCACGTCCTT
GATATTCTCCACCCCCTCCAGCTTCTCCTTTCTCTTCGACGAGTGATTCCGCCCGTTTCTTTCCTTTTTTCGCAGATCCA
TGGCC--------AGAGGTTCTCGCGGGCGT-GGGTCCACGGCGGGTCGCCGCCGCGCACGAGGCGGAGACCAGCAGCTC
CAGCCGGCCGCCGTCGAGCCATGGCGTTCCAACCAGGCGCGCGAACTCGGCTGCCACTGCCGCAGTGAAGGTTGGAGCGT
GTGGGCCTGCTTATACATTTTAGAACGAGGCG-----CCCGCACACGAAGAGGTGACGGGAAGCGGATGAGGAGCTCCTC
GCGGCAAAGAACACGGTTGCGGCCGGAGAAGAAGGCTCCGCCAAAAGGCTCGCCGCCGCAAAGGAGGACCACGC------
--------------GTACGCCCATGCTTGCCGGAGGTTGGAGGAGGCGTTCTACCTCGGCGTCGACTACTGAGCCGGCCT
TCCCTAGGTTTAAATTAGTTTGATCTATGTTTTGTGCTATGTATGATGTATGAGGAACTCCGGTTGTGTTGCTCTGAACT
TTTTAGCGTAAACGAGATTTTAAATATGCAGTACGTTTGAGTGGATCTATTCTGCCGGGAGCTTTGAGTTCCCGCAAAAT
CATTTTAGGGGGCAGTACCGGTTTATAGCAGAGCTGCTAGGGATGCTCTAACACTGCCATGTGGGACCCACCCATCCGAA
TTTGAAATTTCTTTTCTTTTTCCTCTTTTCTGATGCCTCACTCGCC
>chr2A_1
CAATT--------------------------------------------------------------------GCAACAA
GGTAGATGTTCCATAGCTCGCTCTGCAACAGTTGCTTTGTTGCAA-CCATCAAAGCGTTATTTTCGCTTGAATTTTTTTT
TGTCTTCATTTTTTTTAAACATAGATGATGCTGCGGGAGGCCTTTTGCAATAGAGATGGTGTTGCAGTTTTTTTTTCATC
TTCATAGTTTTTGCAACATAGATGATGTTGCGGGAGGACTTTTGCAACATGAATAATGTTGCAGAATTTCTTTCACCGAA
AAGATGATGTCATCTGTGGTGTGAATCGACAAATTTCCGCAACAGAGATGATGTTGCGCGGAAGGACTTTTGCAACAAGG
CCCTTGTTGCGGAAAAGTAT-AAAAAAGCATCGTCGACTGGAGCGACGACGGGCATTGG-------GAGGGGAGGCTGAA
GTGGCACATCTCACCGATGGTGGTTGGAGCACAGCTCGGGCGAGCGGGCGTAAGGAGATAGGGAAAGGAGGACTTGGAGA
GGAAGAGGAGAGGAGAAAGGACGGCCAACGATGTCCTCCGACGATCACCGGCGGCGGACTCGTGAAAGCAGCTTGCAGTA
GTGTGCAGGATGGCTGGCTTGCTGCGGCACTTGTGGCGTGTGGCGGTCGTGGAGCACGGCTGGGAGGATGACATGAATAG
TAGATACAGATACAGACAAGAACGTAGTATGATGCTCGGTTCATTTCACACACGACATGTGTTGAACGTTGGAAGCGGTG
GACGCGGTGCCTGTAATCCATCGGGTGACGGGAATCTA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGCTACGCTCTTGCCGGTGGGTTAATT
GAAAACATCCG---------CTGCCTCCTACGTCGTTGGATTGAGCCACAAATAGCCAT-----CGGATCTCCCCAATAA
GATTCGTCGTCAATTACAACA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AGGTAGTTGTTGCACGGCTCGCTCTGCAAGAATT
GTTTTGTTACAAACCACCAAAGCATTAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------TTTCGCTCGAAACTTTTATTTTTGTTTTCAATTT
TGTTTTGCAACATAGACGATGTTGCGGGAGGACTTCTGCAACAGAG----------------------------------
--------------------GTGGTGTT----------------------------------------------------
----------------------------GCATTTTTTTTCCT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr2A_159
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTTTTCGTC
TTCATAGTTTTTTCAGCATAGACGATATTGCAGGAGGTTTTTTGCAA---GACTAATGTTGCAAAAAAAATTACACCGAA
AAGCTGATATCATTTGTGGTGTGAATCGAGAAATTTTTGCAACAGAGATAATGTTGCGCGGAAGGAATTTTACAACAAGG
CCCTTGTTGTGGAAA-GTAT-AATAAAATATCGTCGGAAGGAGCGATCACA-------GACAGCGAGAGGGGAGGCCGAA
GCGGCGCAGCTCGCTGATGGTGGCTGGAGCACGGCTCAGGCGAGCAGGCATATGGAGATGGGAAAAGGAGGAGTTGGAGA
GGAAGAGGAGAGGAGAAAGGACGGCCAACGGTGTCCTCCTACGATCACCGGCGGCGGACTCGAGAGAGCGGCTTGCAGTA
GTGTGTAGGACGACTGGCTTGCCGCGGCACTGGTGGCGTGTGGCGATCCTCGAGCACGGCTGAGAGAAAGATGCGAAGAG
TAGATAAGGATAAGGACAAGGATGTAGTATGTTGCTCGGTCCATTTCACGCAGGACACA---------------------
------GTGCCTGTAATCCA----GTGACGGAAATCTTTTCCTATTAAACTACGGAAATACAAAACATATAAGTATGGCA
ACATCACTGCCGTCTTGTTGTCTTGTTTGGAGACGAATGTGGCCAAATAATTTGATGTGGCGATAAGAAAATGATTTGTC
GATCGAG-TTGTGTATACGCCGTGGTTGCAGCCACAACACAAGTTGTACCGGGAGCAATATGCTCCATGTGCATCGCCAC
TCTTCTCTATCTATTATAAGATGCACCTTGTGCTACCGCTACCTTATCCCTGC--------TCATACCTTGGCTTGGACT
GTTTGCCGTACAATGTCCTCCTCCTTCTCCACCCCAGCCATTCTGCCGCAAGAGGGCGATGCCGAAACCAACGAGGAGCT
CTACGGGCAGTTCACCGAGCTGGCGTCCTCCTGGCCGTGCTCCCGGGGCCTCTCCAGGGCGAACCTGCTCTACCGCCACG
AGAAGGGCTGGTACAGCACCCTGCCTCTGATGGTCGGCGCGATGGTCGCCGACGCACGCTTCGCCGCGCGCCCCTCGGAC
GTCGTCGTCGCCACCATG-CCCAAGTCCGGCACCACGTGGATGAAGGCGCTCCTCTACTCCACGGTCCACCGGAGGGAGC
ACGCCCCGGGCGGCC---CCGGCCACCCCTTCAACTCCGTCGGCCCGCACGAGTGCGTCCGCCACCTGGAGTACCAGCTC
TACACGCGCAACAGGGTCCCGGACCTCGCCGGGCTCCCGGACCCGAGGCTCCTCGCCACGCACGTCCCGCTCGCGTCGCT
GCCGAGGTCGGTCGCCGCGTCGGGGTGCCGGATCGTGTACGTGTGCCGCAACCCAAAGGACACGCTGGTCTCGACGTGGA
GCTTCGTGAACAAGTTCAGGGCCGAGGACGGGCTGGAGCCGATCTCGGTCGAGGCCGCCGCCGGCTACTTCTGCGACGGC
GTGTCGGCGTCCGGGCCGTACTGGGACCACGTCCTCGGGTACTGGCGCGCGCACTTGGCGAACCCCGAGCGGGTGCTCTT
CTTCAGGTACGAGGAGATGAGCCGGGACCCTGCGGCGCACGTGCGGAGGCTGGCGGAGTTTGTCGGACGCCCGTTCAGCG
C---GGAGGAGGAGGAAGACGGCGCGGTGGACGCCGTCGTCAAGCTGTGCTCGTTCGAGCACATGACCGGGCTCGAAGCG
ACCAAGAG-CGGCAAGACGGAGCTTGTGTTGGGCGCTGTGGAGAACAGCTCGTTCTTCCGGCGCGGCCTGGTCGGGGATT
GGGAGAACCATCTATCGCCGGAGACAGCACGAAAGATTGACGCCATTACCGACGCTAAGTTCAGGGCTTTCGGTCTCTCT
GTCTAGCTAGCATTCGATATCCACGTGTCATCCATATTCGCATCAGTTTGTCTAATTCACATCTAAATGATTTTTAAGGA
TGTCATATCTAACCTCCCATAAATATATAATGCATCAACAAGAAACAAAAAAAAACTATGACAAAAAAAAACCATAAACA
AAATGAAAATCAGCTTAGATGTGACATAACTATGTCACATCTAAATGTGTTCTAAACAGACCCTATTCGCATACGTGTGC
TGCTAATATATGTCAACAAGACAACAGGGAGCGGCATTTTTTTTAGAAAAAGAGATTAACCCCGGCCTCTGCATCGATGC
ACACAGTTATTTTATTAAGAAAATAGGTTCAAAAATCTCCTCAAGTAGTCTCAAAAGATCATGAAGAAGCAAATGCCACA
CGCGGCCAAAAATATAAAAATGTCACAACCGGCTATAATAAATTAAGATATTTATACACCTAGTCTATTACTGAACCGTC
ATCTATATCAGTTGTATATATCACGTGTAACAAGGGAGCAGCATATTGTGTTGATATT--------------GAAATTGC
GCCCGCAAGTTTGGAATTATGGATTGGGGCCAGGCAGTACTGATTAGAGCGTCTCTCCAACGCTAGTCCCATTTTAGAAC
TCCGGAAGAAAAAAATAGAGATGCTTATACATTTCCCTCCAAAAAAAGAGATGCTTATACATTTTCAGCCTCTAAATACT
ACACTCAACTCTAATAGCAACCTTCATCTTCTAGCCCCCATTTTTCTTCCCTAAGAGCATCCCTAGCAGATCTGCTAT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------ATCCTCGCCC
GTTCCTTATAATTCCGACGGTTTTAAAGTTCTTGACCTTTTTCAGGCCTGAACAAATCCCGTAAAAATGGCCCGACCCAT
AAAAATTATGTAGGCGGCCCGCAAATCCCCCTCCG--CCACTGTATGTACAGGTCAGGGCGTTTTAGGGTTCACGTCCTG
GATCTTCTCCGCCCCCTCCAGCGTCTTCTTTCTCTCCGATGAGCGATTTCGCTCGATTCTTTCCTTTTCTCGCAGATCCA
TGGCC--------AGAGGTTCTCACGGGCGTGGGGTCTACGGTGGGTCGCCGCCGTGCACGACGCGGAGGCCACCAGCTC
CGGCCGTCCGC--TCGAGCCATGGCATTACAATCAGGTCCGCGAACTCGGCTGCCACTGCTGCAGTGAAGGCTGGAGCGT
GTGGGCTCGCTTCTACGAGCTTGACGAAGCATTTTTTGCCACACACCAAGAGGTGTCAGGAAGTGGATGAGGAGCTCCTC
GCTGCGAGGAATACGGTGGCGGCCGGAGAAGAAGTAGCCGCCAAACGGCTCGCCGCCACAAAGGAGGACCACAC------
--------------G--------------------GTCGGAGGAGGCGTTCTACCTCGGCATCAACTACTGAGCCGACCT
TTCCTAGGTTTAAATTTGTTTGACCTATGTTTTCTGCTATGTATGTTGTACGAGGAACTCCGGTTGTGTTGCTTGGAACT
TAGTAGCGTAAACTAGATTTTAAATATGCAGTACGTTTGATTGGATCTATTCCGCTAGGAGCTTCGAGGTCCCGCAAAAT
CATTTTAGGGGACAGTACCGATTTATAGCACAACTGCTAGGGATGCTCTAAGACTGCCACGTGGGACCAACATATCAGAA
TTTAAATGTTC-----------------------------------
>chr2B_402
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AA
GCGGCGCAGCTCGCCGATGGTGGCTGGAGCAGAGCTCGGGCGAGC----ATAGAGAGACGCGGAAAGAAGGAGCTGGAGA
GGAAGAGGAGAGGAGAAAGGACGGCCAGCGGTGTCCTCCGACGATGACCGCCGGCGGACTCGAGAGAGCGGCGAC-----
-------------------TGCTGCGGCACTTGTGGCGTGTGGGGATCCTGGAGCACGGTTGAGAGGAGGACACGAAGAG
TAGATAAGGATAAGGACAAGGACGTAGTATGTTGCTCGGTTCCTTTCACACAGGACACATGTTGAACGTTGGAAGCGGCA
GACACTGTGCCTGTAATTCACCGGGTGAAGGTAATCTTTTCCCATTAAACTATGAAAATACAAGACATATAAGTATGATA
ACATCACTGCCGTCTTGTTGTCTTCTTTGGAGACGAACGTGGCCAAATAATTTGATGTGGCGATAAGAAAACGAGTTGTT
----GAG-TTGTGTATACGCCGTGGTGGCAGCCACCACACAAGTTGTACCGGGAGCAATATGCTCCATGTGCATCGCCAC
TCT--TCTATCTATTATAAGATGCACCTTATGCTAG------CTTATCCCTGTTCATACGGTCATACCTGAGCTTGGGCT
GTCTGCCGTACAATGTCTTCTTCCTCCTCCATCCCAACCTTTCCGCCGCAAGAGGGCGATGCCGAAACCAACGAGGAGCT
CTACGGGCAGTTCACCGAGCTGGTGTCCTCCTGGCCGTGCTCCCGAGGCCTCTCCAGGGCGAACCAGCTCTACCGCCACG
AGAAGGGATGGTACAGCACCCTGCCTCCGATGGTCGGCGCGATGGTCGCCGACGCACGCTTCGCCGCGCGCCCCTCGGAC
ATCGTCGTCGCCACCATG-CCCAAGTCCGGCACGACGTGGATGAAGGCGCTCCTCTACTCCACGGTCAACCGGAAGGAGC
ACCCCCCGGGCGGCC---CCGGCCACCCGTTCAACTCCCTCGGCCCGCACGAGTGCATCCGCCACCTGGAGTACCAGCTC
TACACGCGCAACAGGGTCCCGGACCTCGACGGGCTCCCAGACCCGAGGCTCCTCGCCACGCACGTCCCGCTCGCGTCGCT
GCCGAGGTCCGTCGCCGCGTCGGCGTGCAGGATCGTGTACGTGTGCCGCGACCCCAAGGACACCCTGGTCTCGACGTGGA
CCTTCGTGAACAAGTTCAGGGCCGAGGACGGGCTGGAGCCGATCTCGGTCGAGACCGCCGCCGACTACTTCTGCGACGGC
GTGTCGGCGTCCGGGCCGTACTGGGACCACGCCCTCGGGTACTGGCGCGCGCACCTGGCGAACCCCGAGCGGGTGCTCTT
CTTCAGGTACGAGGAGATGAGTCGGGACCCTGCAGCCCACGTCCGGAGGCTGGCGGAGTTTGTCGGACGCCCGTTCAGCG
C---GGAGGAGGAGGAAGATGGCGCGGTGGACGCCGTCGTCAAGCTGTGCTCGTTCGAGCACATGACCGGGCTCGAAGTG
ACCAAGAG-CGGCAAGACGGAGCTTGTGTTGGGCGCTGTGGAGAACAGCTCGTTCTTCCGGCGCGGCCTGGTCGGGGACT
GGGAGAACTATCTGTCGCCGGAGACAGCACGAAAGATCGACGCCATTACCGAGGCTAAGTTCAGGGGTTTCGGTCTCTCT
GTCTAGCTAGCATTCGGTATCCGCGTGTCATTCAA---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TATTCGCATACGTGTGC
CGCTAGTATATGTCAACAAG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GGAGCGGCATATTGTGTTGATATTTTTATTTGTGGATTGAAATTGT
GCCCGCAAGTTTGGAATTATGGATTGGGGCCAGGCAGTACAGACTAGAGCGTCTCTCCAAAGCTAGCCCCATTTTAGAAC
TCTCGAAGAAT-------------------------------AAATAGAGATGCTTATACATTTTCAGCCCCTAAATATT
ATACTCAACTCTAATAGCAACCTTCATGTTCTAGACCCCACTTTTCTTCCCTAAGAGCATCTCTAGCAGATCTGTTATTT
ATATATATTTTTTAAAAAGAGGATCACCCCGGGCCTCTGCATCAATCGATGCATGCAGCCATATTAATAAATAAAAACAT
GACAAAGTCATGAGGTTCAAAGAAACTTAAAAAATTACCAGAATTCAAAATAAAATCTAAAAGACGCCACAACGGGTGAT
AAAGAACTGAAAAGTGCCACATCCGGCGATAAAACAACAAGCTACGATGCCTACATACCTAGCCTATTATTAGCTCGCCA
CCCAAATCGGCTGGAGATAGCCCATGCTACCGTCTCCCAACGGTTGCACCCAATAACTATATAATTCTATATCCTTGCCG
GC-CCTTATAATTTAGATGGTTTTAGAGTTTTTGACCTTTTTCGGGCCCGAACAAATCCCGTAAAAATCGCCCGGTCCGT
AAAAAATATGCAGTCGGCCAGCAGACCCCCCCCCCCTCCGCTGTATGTACGGGTGTC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr2D_1019
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACGATGTCTTCCTCCTCCTCCATGCGAATCTCTCCACCGCAAGAAGGCGAGGCCAAAACCAACGAAGAGCT
CTACCAGCAGTTCACCAAGTTGGTGTCCTCCTGGCCGTGCTCCCCTGCCCTCTCCAATT---ACCAGCTCTACCGCCACG
ACAATGGCTGGCACAGCAGCCTGGCTCCAATGGTCGGCACCATGGTCGCCGACGCATGCTTCGCCGCGCGCCCCTCGGAC
ATCATCGTCGCCACGCTG-CCCAAGTCCGGCACGACGTGGATCAAGGCGCTCCTCTACTCCACGGTGCACCGGAGGGAGC
ACCCCGCGGACTC---CTCCGACCACCCGTTCAACACCCGTGGTCCTCACGAGTGCATCAAGTTTCTCGAGTACCAGCTC
TACACGCAGAACAGGATCCCGGACCTCGACGAGCTCCCGGACCCCAGGCTCTTCGCCACGCACGCCCCCTTCGTGTCGCT
GCCGAGGTCAGTCGTGGCGTCGGGCTGCAAGATCGTGTGCGTGTGCCGCGACCCCAAGGACACCCTGATCTCGCATTGGA
ACTTCGCGAACAAATTCAGGGTCGGGGACGGACTGGAGCCGCTCTCAGTCCAGGCCGCCGCCGACTACTTCTGCGACGGC
GTGTCGCCGTTCGGGCCGTGCTGGGACCATGTCCTCGGGTACTGGCGCGCGCACTCCGCGAACCCCGAGCAGGTGCTCTT
CTTCAGGTACGAAGAGATGAGTCGTGACCCGGCGGCACACGTGCGGAGGCTGGCGGAGTTTGTCGGATGTCCGTTCAGTG
T---GGAGGAGGAGGAAGACGGCGTGGTGGACGCCATCGTCAAGCTGTGCTCGTTCGAGCACATGACTGGGCTCGAAGCG
ACAAAGGG-TGGCAAGACAGAGCTCACGTTTGGCGTTGTGGAGAACAGCTCATTCTTCCGGCGCGGCCAGGTCGGGGACT
GGGAGAACCATCTATCGCCGGAGACGGCACGAAAGATCGATGCCATCACCGAGGCCAAGTTTAGGGGCTCCGGTCTCTCT
ATCTAGCTAGC---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr2A_1019
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACGATGTCTTCCTCCCCCTCCATGCGAATCTCTCCACCGCAAGAAGGCGAGGCCAAAACCAACGAAGAGCT
CTACCAGCAGTTCACCAACTTGGTGTCCTCCTGGCCGTGCTCCCCTGCCCTCTCCAATT---ACCAGCTTTACCGCCACG
ACAATGGCTGGCACAGCAGCCTGGCTCCAATGGTCGGCACGATGGTCGCCGACGCATGCTTCGCCGCGCGCCCCTCGGAC
ATCATCGTGGCCACACTG-CCCAAGTCCGGTACGACCTGGATCAAGGCGCTCCTCTACTCCACGGTGCACCGGAGGGAGC
ACCCCGCGGACTC---CTGCGGCCACCCGTTTAACATCCATGGTCCTCACGAGTGCATCAAGTTTCTCGACTACCAGCTC
TACACGCAGAACAGGATCCCGGACCTCGACGAGCTCCCGGACCCAAGGCTCTTCGCCACGCACGTCCCCTTCGTGTCGCT
GCCGAGGTCGGTCGTGGCGTCGGGCTGCAAGATCGTGTACGTGTGCCGCGACCCCAAGGACACCCTCATCTCGCATTGGA
ACTTCGCGAACAAATTCAGGGTCAGGGACGGTCTGGAGCCGCTCTCGGTTGAGACCGCCGCCGACTACTTCTGCGACGGC
GTGTCGCCGTTCGGGCCGTACTGGGATCATGTCCTAGGGTACTGGCGCGCGCACTCCGCGAACCCCGAGCAGGTGCTCTT
CTTCAGGTACGAAGAGATGAGTCGAGACCCGGCGGAACACGTGCGGAGGCTGGCCAAGTTTGTTGGATGCCCGTTCAGTG
T---GGAGGAGGAGGAAGTCTGCGCGGTGGACGCCATCGTCAAGCTGTGCTCGTTCGAGCACATGACCGGGCTCGAGGCG
ACCAAGGG-CGGCAAGACAGAGCTCACGTTTGGCGTTGTGGAGAACAGCTCGTTCTTCCGGCGCGGCCAGGTCGGGGACT
GGGAGAATCATCTATCGCCGGAGACGGCACGAAAGATCGATGCCATCAGCGAGGCCAAGTTTAGGGGCTCCGGTCTCTCT
GTCTAGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr2B_1031
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TCCTCCTCCATGCGAATCTTTTCACCGCAAGAAGGCGATGAGAAAACCAACCAAGAGCT
CTACCAGCAGTTCACCAACTTGGTGTCCTCCTGGCCGTGCTCCCCAGCCCTCTCCAATT---ACCAGCTTTACCGCCACG
ACAATAGCTGGCACAGCAGCCTGGCTCCAATGGTCGGCACCATGGTGGCCGACGCATGCTTCGCCGCGCGCCCCTCGGAC
ATCATCGTCGCTACGCTG-CCCAAGTCCGGCACGACGTGGATCAAGGCGCTCCTCTACTCCACGGTGCACCGTGGGGAGC
ATCCGGCGGACTC---CTCCGACCACCCGTTCAACACCCATGGTCCTCACGAGTGCATCAAGTTTCTCGAGTACCAGCTC
TACACGCAGAACAGGATCCCGGACCTCGACGAGCTCCCGGACCCAAGGCTCTTCGCCACGCACGTCCCCTTCGTGTCGCT
GCCGAGGTCGGTCGTGGCGTCGGGCTGCAAGATCGTGTACGTGTGCCGCGACCCCAAGGACACCCTGATCTCGCATTGGA
ACTTCGCGAACAAATTCAGGCTCCGGGACGGACTGGAGCCGCTCTCGGTTGAGACTGCCGCCGACTACTTCTGCCACGGC
GTGTCGCCGTTCGGGCCGTACTGGGACCATGTCCTCGGGTACTGGCGCGCGCACTCCGCGAACCCCGAGCTGGTGCTCTT
CTTCAGGTACGAAGAGATGAATCGAGATCCGGCGGCACACGTGCGGAGGTTGGCGGAGTTCGTCGGATGCCCGTTCAGCG
T---GGAGGAGGAGGAAGACGGCGCGGTGGACGCCATCGTCAAGCTGTGCTCGTTCGAGCACATGACCGGGCTCGAAGCG
ACCAAGGG-CGGCAAGACAGAGCTCACGTTTGGCGTTGTGGAGAACAGCTCATTCTTCCGGCGCGGCCAGGTCGGGGACT
GGGAGAATCATCTATCGCCGGAGACGGCACGAAAGATCGATGCCATCACCGAGGCCAAGTTTAGGGGCTCCGGTCTCTCT
GTCTAGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>chr2D_1205
GGCGCCGATGCTCTCCACGATGGTGCC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CCACGCGCCCCTCGGAC
ATCGTCATCGCCACGGCGCCCCAAGTCCGGCACGACGTGGATAAAAGCGATGCTTTACTCCACGGTGCACCGGAGGGAGC
ACCCCGCGGCCGGCGGCTCCGGCCACCCACTCAACTCCCTCGGCCCACACGAGTGCGTCAAGTTCCTCGAGTACCAGCTC
TACGTGCCGAACCAAATCCCTGGCCTCGACGAGCTCACGGACCCCAGTCTCTTCGCCACGCACGCCCCGTTTGTGTCGCT
GCCGGGGTCCGTGCCCGCGTCCGGCTGCAAGGTCGTGTACGTGTGCCGCGACCCCAAGGACGCCCTGGTCTCGCAATGGA
GCTTCGTCAACAAGTACAGGGCCAGGGACGGGATGGAGCCGCTCTCCGTCAAGACCGCCGCCGGTTTCTTCTGCGACGGC
GCCACGCTCTCCGGGCCGCACTGGGACCATGTCCTCGGGTACTGGCGCGCGCACCTGGCGCAGCCGGAGCGGGTCCTCTT
CCTCAGGTACGAGGAGATGAGCCAGGACCCTGCCGCGTGCGTGCGGAAGCTGGCGGAGTTCATCGGGCGCCCGTTCGCCA
TGGAGGAGGAGGAGGAGGCGGGTGCCGTCGACGCCATCGTCAACCTCTGCTCGTTCGACCACATGACTGCGCTCGACGTG
ATCAGGCGTCGGCAAGACGGAACTCCTGCTCGGTACGATGGAGAACAGTTGGTTCTTCCGGCGCGGCCTCGTCGGGGATT
GGAAGAACCATCTGTCGCCGGAGACTGCACGGAGGATCGACGCCATCACCAAGGCCAGGTTCAAAGGTTCCGGTCTC---
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>chr2B_2528
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-----------CCCCCTCCAGCGTCTCCTTTCTCTCCGACGAGCGATTCCACCTGTTTCCTTCCTTTTCTTGCAGATCCA
TGGCC--------AGAGGTTCTCGCGGGCATGGGGTTCATGGTGGGTCACCGCCGCGCACGATGCGGATGCCAGCAGCTC
CAGCCGCCCGCCATCGAGCCGTGGTGTTCCAATCAGGTTCACGAACTCGGCTGCCACTGCTGAAGTGAAGGCTGGAGCGC
GTGGGCCCGCTTCTACGAGCTTGATGAGGTGC-TTTTCCCGCACACCAAGAGGTGCCGGGAAGTGAATGAGGAGCTCCTC
GCCGCAAAGAACATGGTGGCGGCCGGAGAAGAAGGCACCGCCAAAAGGCTCGCTGCCGCAAAGGAGGACCACACATACGC
CCATGCTTGCCGGAG--------------------GTCGGAGGAGGCGTTCTACCTTGGCATCAACTACTGAGCCACCCT
TCCCTAGGTTTAAATTAGTTTGACCTATGTTTTGTGCTATGTATGATATATGAGGAACTCCGGTTGTGTTGCTCTGAACT
TTGTAGCGTAAACTAGATTTTAAATATGCAGTACGTTTGAGCAGATCTATTATGCTGGGAGCTTCGAGTTCCCACAAAAT
CATTTTAGGGGGTAGTACTGGTTTTTTGTAGATCTGCTAGGGATGCTCTAACAATGCCACATGGGACCCACACATCCGAA
TTTAAAATTTCTTTTCTTTTCCCTCTTTTCCAACGCCTCACTGGCC
>SNPs
-SSS-SSS-S--SSSSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-----S----S--S-------------------------------S---S-----S-S--S---SS-SSS-------S--
-S-S-SSSSSS---S-----------------------------------------------------------------
------------SS---------------SS--------------------------------------S---S--S---
---------S-SS-------------------------------------------------------------------
------S-------------S-----------------S-S-----S-----S--SS-----------------------
--------S------S-----------------------------S-S--------------------------------
-----------------------------S------S------------S-----------S-------------S----
-------------------------------------------------------------------------------S
----------------------------------------------------S---------------------------
-----S-----------------------------------------------------------S--------------
-------------------------------------------------------------S-------------S----
-------S------------------------------------------------------------------------
------SS-------------------------------S----------------------------------------
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-------------------------------------------S-------------------S--------------S-
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--S-------------------------------------------------S---------------------------
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--------------------------------------------S-----------------------------------
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----S---------------------------------------------------------------------------
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-------S------------------S-----------------------------------------------------
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--------------------------------------S-----------------------------------------
-S------------------------------------------------S-----------------------------
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------------S--------------------S--------------S--------S----S-----------------
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S----------------------------------------------S-------------------------S------
--------------------S-----------S--SS-SSSSSSSSSSSS-----------------------------S
---S------S-----------S------------S-------S------------------------------------
------------------------------------------S-------------------S------S----------
------S-----S-------------------S----SS---------------------S----------S--------
-------S----S---SSSS-S--SSS--SSS--------------S--------S-------S----------------
--S--------------S------------------S-----------------------------------S-------
---------------SSSSSSSSSSSSSSSSSSSS--S----------------------S--S------------S---
-----------------------S--------------------------------------------------------
--S----------S-----------------------------------------S--------S---------------
--------------------------------S--------------------------S-----------S--------
---S----------------S---------SS-S--------S---
>forward_636
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--------------------------------------------------------GACTCAAGAGAGCGGCTTGT----
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>reverse_3408
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-----------------------------------------------ATGGGGTCAGGGCGTTTTAG-------------
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