>input_sequence_56420
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-------------------------------------------ACGAACACAAGA----TCCATATCTAGCTCATTAGCC
AGTACACGTTTCCCCGACAAT-----------AAAAAACATCTAGATCGGATGGCCGACCAGGGGAGCAAGACGACGAGC
TGGTGGAGGAGGTTCCGGTGGCTATATGCGGTGCGGTGCACGTTAGCGTGCGTGGTCACCCTGGTGGCCGTGGGAGTGAT
CGCTCGGGCGGTGGTGGTGATGCTCCGCCCCGAGAAGCTCCAGCTGAAGCTCGCCGGCGGCCGTGTGGCTGTCGACTACA
TCCCGTCGCTGCCGCCGCCGCGCAACGTCGTGGTCTTCAGGGTCGTCCTGAAGGCCAACAACCCCGGCGGGCGCGCCACC
ATTGTTTACGCCAACGTCACCGTCCGGCTCACGGACG---------CGTCTGCGG---------G---------ACCTGC
TGCGAGGATCACCGAGTTCGACCTGCCGCAGCGCATCGACGTGGCGCAGCGTATGGCGCACGAGGCGACCGCGGTGGCCG
GGCTGGAGCCGGGGGAGGACCTGACGATGCGGTACGTGCGCCCCCTCTACGAGGGGCGCGGCGTATCCGGCGCGGAGATG
GAGCTGAGCGGGGTCTTGTCCACCCACACGGCGA---TGGCCACC---------------ACCAGCGTCCTCACCACGTA
CTACTGCTGGCCGGTGACCATCACCATCGTCGTGGGCG---ACT---CCGCCGCGGACGTGCCCTGCTTCGACAAGCTGG
ACGCGCCGGCCCATGTGTGATCAATCAAGCGAGCGGGCAAGGCTACAGATCGACCTAGCTAGCTTGGTACCATAATGTAA
GATGTTTTTTGACTCTAGTGTCGTGTTAAAAAACGTCTTACA-----CCTATCTGTAGACTGTACTATTGTAGTAGGCTC
GATGATCCGTGCATGGTTAATGCCTGCCATGACGAGTTATTTGCGTTGAATTAACTCTAGCTGCAGTGCAGCAGCGTGAG
TATGA--ATATAT--ATTTACCTGCCTGCCGAGTCTCTCGTTGTGACATTTACAACTCTTTGTTGCAGTGAAGAACAACT
ATTGATGTAATAAGTTGCAATCGGGTCTGATCTAATGTTTAGCATGGCAGATGGGATTCATGAATCATGGGTCCCACGAA
TGTTAAAACACACTTAAATATTGGCAAAATAATTGTTCACTCAAAA-TTAGGAATTTTCCCGTGGATACATTTTTAAGCA
GCACTACAACAATTTTATTTTTTGTGAATGATTGAAGTTTAC-TAAAAAATTGTGAAATTATGTGGCGTGCGGACAAAGG
CTGAATAAA-----------------------------------------------------------------------
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----------------------
>chr4A_1_TraesCS4A01G437400
CATATAAATCAAAACTAGCCTCTCTTTTTGACTTACACTCTCGTGGCTGCATTTCGAAGGGCATCATATACTTGCAATTG
AAGTAATCATCATACATCTTCACTACCTCACGAATATGGCTGAACACGTGTCTTGCCATCCGGAAGCATCGTCAGAAAAG
CTTGGGAGGGAATGGTGGGTCATTGAACTTGAAATAATCGCTATAGAGTAGGGAATGGTCGCTCTCTCTGTTACGATTCA
ACCCTGGAGCATGGCCAGGGATCGATGCCATAAACCTTGGCTGCTGCCTAGCTATGTGCTCATTGACGTCCAAAGTAGCT
ATAGCAGCAGCAGCATCATCGTCGGACGATTCTTCAGATGATGAACATACAAAGTTGGTATTAAAATAATCATCCAAGTT
ATCCACCATGATGAAACCATACCTCATCCGAGTCAGGCAAACACCCAAAGATCTTGCGGGCGGCGATGGGGGTGGGGTGT
TGACGAGTCGCGACCGGTGAATGGAGCCCTCCTTGGCCCGTCCATGGAGATGGAGGCAGTACGGATGTCGAACCCCCACG
CTCTTCGGCGGTGGCCGAGGAGTAGGCAGGCCGTGGATGTCGCGGCTACAATGATGGCAGATCTAGGCAGTGATGGATGC
GGCCAACGATGGGGCTGTCAGTGGACGCGATGGCAGGGGGGAGCGATGTGCAGAAGCTGGAAGTGGGCGGCGGCACTGGC
GAAGAGGGCTGGTGCTATTTGGGAGGGAGAATGGTCTGTGTACCATAGGCGGGCAGGCCTGGGAGGACTCAGTGGACAAA
ATGGGTCGGCGCGTTGGAGCTGACCCATTCGTTTGCGTCGGCGCGTTGGCCA-TGATTTTTGTCCATTTAGACTTAAACT
AGTGGACGCGGACAGATAAAATGGGTTGCCGCATTGGAGTTGGCCCAAGGAACTTGCTGGTAGTGTATTCTACTTCTAAG
TTTCTATAAATAGATACCGGAAGTGGATCTCTCT--ATCATCCACGAACACAAGA----TCCATATCTAGCTCATTAGCC
AGTACACGTTTCCCCGACAAT-----------AAAAAACATCTAGATCGGATGGCCGACCAGGGGAGCAAGACGACGAGC
TGGTGGAGGAGGTTCCGGTGGCTATATGCGGTGCGGTGCACGTTAGCGTGCGTGGTCACCCTGGTGGCCGTGGGAGTGAT
CGCTCGGGCGGTGGTGGTGATGCTCCGCCCCGAGAAGCTCCAGCTGAAGCTCGCCGGCGGCCGTGTGGCTGTCGACTACA
TCCCGTCGCTGCCGCCGCCGCGCAACGTCGTGGTCTTCAGGGTCGTCCTGAAGGCCAACAACCCCGGCGGGCGCGCCACC
ATTGTTTACGCCAACGTCACCGTCCGGCTCACGGACG---------CGTCTGCGG---------G---------ACCTGC
TGCGAGGATCACCGAGTTCGACCTGCCGCAGCGCATCGACGTGGCGCAGCGTATGGCGCACGAGGCGACCGCGGTGGCCG
GGCTGGAGCCGGGGGAGGACCTGACGATGCGGTACGTGCGCCCCCTCTACGAGGGGCGCGGCGTATCCGGCGCGGAGATG
GAGCTGAGCGGGGTCTTGTCCACCCACACGGCGA---TGGCCACC---------------ACCAGCGTCCTCACCACGTA
CTACTGCTGGCCGGTGACCATCACCATCGTCGTGGGCG---ACT---CCGCCGCGGACGTGCCCTGCTTCGACAAGCTGG
ACGCGCCGGCCCATGTGTGATCAATCAAGCGAGCGGGCAAGGCTACAGATCGACCTAGCTAGCTTGGTACCATAATGTAA
GATGTTTTTTGACTCTAGTGTCGTGTTAAAAAACGTCTTACA-----CCTATCTGTAGACTGTACTATTGTAGTAGGCTC
GATGATCCGTGCATGGTTAATGCCTGCCATGACGAGTTATTTGCGTTGAATTAACTCTAGCTGCAGTGCAGCAGCGTGAG
TATGA--ATATAT--ATTTACCTGCCTGCCGAGTCTCTCGTTGTGACATTTACAACTCTTTGTTGCAGTGAAGAACAACT
ATTGATGTAATAAGTTGCAATCGGGTCTGATCTAATGTTTAGCATGGCAGATGGGATTCATGAATCATGGGTCCCACGAA
TGTTAAAACACACTTAAATATTGGCAAAATAATTGTTCACTCAAAA-TTAGGAATTTTCCCGTGGATACATTTTTAAGCA
GCACTACAACAATTTTATTTTTTGTGAATGATTGAAGTTTAC-TAAAAAATTGTGAAATTATGTGGCGTGCGGACAAAGG
CTGAATAAACACCAAAATTAAACAAAACTTGTTGCATGTCCAAAAA-TGACA-CTCTTCGTTGATGCTTGTTAAGGTTTA
ACTGATATACTTTTGACAAAATACAAATATTACTT-AAAATGTGCCAAAAACAATATTTGACGTTTTGTAATGAAATTTA
TAGATGGATTTGACCTCGGATAATGTAGCACAATCATATAGGCGTTGGTATTTCATGAATAATAGGCTATTAAACCATGA
TAACAGCGATCGTAACAATTCATATTA-----------------------------------------------------
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---TTTTGACGAATATATATTTCCAATATTTATTTTAGTGCAACATGAGTTTTTATTTTTGTAAAAAGAAACCAATCACA
GGTTTCAAGCAAAGATGGATTGTTTATTAACAATAAGTTTGTTATCTAA-------------------------------
--------------------------------------------------------------------------------
------------------------------------------TATATCAGTATATAGTTGTATGAATAACTTGGAATATT
GGTCAAAGGATGAAGCCAATCTAATGGTACAAAGGTCAGGAATCCAAGCACTATTGGTCGTACGATATCATCTTCAGCCC
ATCAGATTCTGCCACATGTACTAACTAGAAGGTTCTAT-GTTGAGCCAACAGAATGAGCAAACCTAAATAGC--AGTTTT
TCTTTGTTACAGAATCTCAAAAACTTTAATTTGTCAAAAAAAATTCTAAATAAGTTACTATTATTTTGTACTTTATGGTT
TGCAATGCACAATAT-----------------------------------------------------------------
--------GCACAAACTTGAAAACAGAAGCACTTCTTCTTTG---CCCTCGAATTTTCCATACATTAAATCCAAACTTTT
GTATTCCAAATGAATTGTCATTACTTTTTTAGTTCATGATCTACAATTCACAAAGATCACATCATAGTCCTTCTCATTTC
TTCTGGAATCTTCCATACGTTAGTGCCAAATTTTTTTTTGTCCTCTAGAAGAATTTTCATTCACTTTTTCTTTACGA--T
TGTATTCAAGACTATGAAAAGATGTTCATAAGTTTCATTTCTCTTTAGAGATGTCATACTAGCTACTGAGATACTTGAGA
CATTTTTTTTGGATATATTAAT
>chr7A_3
--TATAAATCAATACTAGGCTCTCTTTTTGACTTACACTCTCGTGGCTGCATTTCCAAGGGCATCATA--CTTGCATTTG
AAATAATCATCATACATCATCACTCCCTCACGAATAT-------------------------------------------
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------------GTTGGAGCTGACCTGTTTGTTTGTGTCAGTGCGTTGGACCGTGATTTTTGTTCGTTTACAGTTAAACT
AATGGATGCAGACAGATAAAATGGGTCGCCGCATTGGAGTTAGCCCAAGGAACTTGCTGGTAGTGTATTCTACTTGTAAG
TTTCTATAAATAGGTACCGGAAGTGGATCTCTCT--ATCATCCACGAACACAA---AGGTCCATCTCTAGCTCATTAGCC
AGTACACGATTCCCCGACCAAAAATAAGTAA--------ATCCAGATCGGATGCCCGAGCAGGGGAGCAAGGCGCCGAGC
TGGTGGAGGAGGTTCCGGTGGCTATACGCGGCGCGGTGCACGGTGGCGTGCGTGGTCACCCTGGTGGCCGTGGCAGTGAT
CGTTCGGGCAGTGGTGGTGATGCTCCGCCCCGAGAAGCTCCAGCTGAAGCTCGCCGGCGGCCGCGTGGCTGTCGACTACA
TCCCGTCACTGCCGCCACCGCGCAACGTCGTGGTCTTCAGGGTCCTCCTCAGGGCCAACAACCCCGGCGGGCGCGCCACC
ATTGTTTACGCCAACGTCACCGTCCGGCTCACGGACG---------CGTCGGCGG---------G---------ACCTGC
TGCGACGATCACCGAGTTCGACCTGCCGCAGCGCATCGACGTGGCGCAGCGTATGGCGCACGAGGCGACCGCGGTGGCCG
AGCTGGAGCCGGGGGAGGACCTGCCGATGAGGTACGTGCGCACGCTCTATGAGGGGCGCGGCGTGGCCGGCGCGGAGATG
GAGCTGAGCGGGGTCTTGTCCACCCACACGGCGA---TGGCCACC---------------ACCAGCGTCCTCACCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCGTCGCAGGCG---ACT---CCGCCGCCGACGTGCCCTGCTTCGACAAGCTGG
ACGCACCGGCCCATGTGTGATCAATCAAGCGGGCGGGCAAGGCTACAGATCGACCTAGCTAGCTTGGTACCT--------
-----------------------------------------ACTGTACCTATCTGTA-AACT--GTATTGTAGTAAGCTC
GAGTTATTTGC----GTCGATGCCTGCCATGCCGAGTTATTTGCGTTGAATTAACTCTAGCTGCAGTGCAGCAGCGTGAC
TACGA--ACATAT--ATTTACCTGCCTGCCGAGTCTCTCGTTGTGACATTTACTACTCTTTGTTGCAGTGAACACCAGCT
ATTGGTGTAATAAGTTGCAATCGGGTATAATCTAATGTTTAGCATGACTGATGGGATTGATGTATCATGGGTCCCACGAG
TGATAAAAAACACTTAAATATTGGCAAAATAATTGTTCACCCAAAAATTATGAATTTTCCTGTGGATACATTGTTAAGCA
GTACTACACCAATTATG-GTTTTGTGAATGATTGATGTTTACTTAAAAAATTGTGAAATTATGTGGCATCCGGACAAAGG
CTGAATAAACACCAAAATTAAACAAAACCAATTGCATGTCCAAAAA-ACACA-CTTTTTGTGGATGCTTGTTAAGGTTTA
ACTAATATACTTTTGACAAAATACAAATATTACTTAAAAATCTGCCAAAAACAATATTTGACGTTTTGTAATGATATTTA
TAGATGGATTTGACCTCAGATATTGTAGCACAATTATGTAGGCATTGGCATTTCATGTATAATAGGTGAATTACTTGCAC
GATGGGTTTAGGGTCTATGCTATACGAAATTGCATAGGAGCACTCGGCGACGCTGCCCACCGGAATCCTGCCCACCCACT
TGTCTCGGGATCTGCAATCACTATATTAGCCACACCGTATTCTCATTTGCTTTTGGCTCGTATCTGTCCTAAAGTCCACG
CGTTTCTGTTCCCACAGTGTCTGCTTCTTCTATTCGACAGCACGAGCTCAACTCAACTAACACCCGCCAACCACCTAACT
CAGTTAAATGCACTGATGCTACTAGTCCTCCAACGGTCCCCTCCTCTCTTCTACCCAAGGGTCTTCTTCCTCCTTACACC
ATATGTCTTCTACATTCTGGCACACACAACTATAGGAGACCCCCTCCTTACACCATTTTAGCTCAATCTCGCACACACAA
CTACAGAGCCCCTCCACTTCGTGTTTTCTCAAGATGGTTCTCACCACCATGTCAAGCTCCAGCGCTCCAGTGGCACTAGA
TGAACAACCTCGGCTTGCACTCATGGTTTGCCCGTTCTGTGGCAATGGAATGGTTCAATGATGGGTCTTTCACAGCTCCA
CTTGTTCGCTGTGTTCCAAGCTAGCGTGGAACAAAGCCAAGAGGAACTCCGAGCTTGCCGCGTCTTGCACTGCCACGGTC
AGCGACACCATGTCCGCCCTGCACGTCGACACCAAGCCATGCGTTCCGGCGGCCAGTGAAAACGTGTGGGAAGAAAAAAC
CAAGAAGAAGACTATGAAATCCATTACCACCAAATCGAAGTAGCCGTCCCAGGCCGAGTTTGCCGCATCCTACGAGGTCG
CAACTAGCGACACCGCATCCCCTGGCTTCTAGCACCATGTCCTGTGTTCCCACACCAGGTTCCAGTAGCTCTCTCTCTCA
CCTTGCAGCAGCAGCCACGAGTTCCAGGGAACGGCTAGCAAGAGAGGTCGGGCATCTGTCCCTCTCTCCCTCTTCCCCCG
GTTAGTTTTTTTAACGAGGCCACTGTTCTTCCCAGCAGCTAGTCGTTCCCAAAGAACGGGCTATGATCCAGAAATACACC
TCGCTCCAATAGAGAAGAATCACCAGGTCCAGTCTCACCGATGTATACTCGTTGGAGTTTTATCCTTTGTATGGACCTGC
AGAAGCAGGCTGCCATGGCCAACATCTGGTCCGCGAGTCCTCTTTACGTCACAAGCACGAGGTACTTGCAGCCGTCAACC
GTGGTGGTGCCCGTCCGTTTTGGCGGAAGTCCAGCCGCAGCTCGCCAGGATACCTAGGTGCCATGGCCGCAGCGGCTCAC
GGTTTATTATTTGCAGACATCTCCAACCTTTACTGTTGTGTCCCACTAGC------------------------------
-----CAATTAAATGTGGATGCACAGGTATGCACTGTGCCCATGTACTCTTTGGCGGTGTATTCGCATATGGGAAATGAT
TAGAGCAAAACATGCATGCATCTCCAGATAGCATTGCGCGGCCTGGATTACAGGGAGGTGCGCCTCCGTGTGCTCCTAGT
TCGCGTCCCTATACGAAATTGCATAGGAGCACTCGGCGACGCTATATCTGTATATAGTTGTATGAATAACTTGGAATCTT
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----------------------
>chr5B_52
TTTCAAGGGTATC------------------------------------------------------ATACTTGCATTTG
AAGTAACCATCATACGTCACCACTCTCTCCCGAATGTGGTTGAACACATGTCTCGCTATCCGGAAGCGTCCGAG--AAAG
GTTGGGGGGGAATAGTGGGTCATTGTACTTGAAAATTGTTC--TAGAGTAGGCAATGGCCCCTCCCTCTGTTACGATTCA
ACCCTGGAGCATGGCTCAGGAACAATCCCCTAAACCTTGGTCGCTGCCTAGTAATGTGCTCATTGACGACCAAAGTAGCT
ATCGTAG-------------------------------------------------------------------------
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--------CATCATCATCATCGTCGGGCG---------------------------------------------------
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-----------------------ATTC-----------------------------------------------------
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---TTCGGATGATG------------------------------------------------------------------
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------------------AACACATGAAGTTGTTG--TAAAAAATCTCATCCGAGCTGTCCACCATGATGAACCGTACCT
CAACCTATTCAAGCAAAATGTCGAACATCTTGCGAGCGACGATGGGGGTGGGGCAGTAGAGCGCGACCGGTGAATGGAGC
CCTCTTTGGCACATCCACGAAAACGGAGGCAATAGGTCTATCGAACCCCCGCGTTCTCCGACGGTG--------------
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----------------------
>chr7D_913
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---------------------------------TTGGAGATGCCCGAAGGAACTTGTTGGTAGCGTATTCTATTTCTAAG
TTTCTATAAATAGATACCGGAAGTGGATCTCTCTCTATCATCCATGAACACGCTGTAGGTACATATCTAGCTCATTTGCC
AGTAC--GTTTCCCCAACCCCCAAAAGAAAAGAAAAAACATCCAGCTCGGATGGCCGAGCAGGGGAGCAAGATGCCGAGC
TGGTGGAGGAGGTTCCGGTGGCTATACGCGGCGCGGTGCATGGTGGCGTGCGTGGTCACCCTGGTGGCCGTGGCAGTGAT
CGTTCGGGCGGTGGTGGTGATGCTCCGCCCCGAGAAGCTCCAGCTGAAGCTCGCCGGCGGCCGCGTGGCTGTCGACTACA
TCCCGTCGCTGCCGCCACCGCGCAACGTCGTGGTCTTTACGGTCGTCCTCAGGGCCAACAACCCCGGTGGGCGCGCCACC
ATTGTTTACGCCAACGTCACCGTCCGGCTCACGGACG---------CGGCGGCGG---------C---------ACCTGC
TGCAAGGATCACCGAGTTCGATCTGCCGCAGCCCATCGACGTGGCGCAGCGTATGGCGCACGAGGCGAGCGCGGTGGCCC
GGCTGGAGCCGCCGGAGGACCTGCCGATGCGGTACGTTCGCGCGCTCTACGAGGGGCGCGGCGTGTCCGGCGCGGAGATG
GAGCTGAGCGGGGTCCTGTCCACCCACACGGCGA---TGGCCACC---------------ACCAGCGTCATCACCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCGGCCCGAGCG---ACG---ACGCCGCCGACGTGCCCTGCTTCGACAAGCTGG
ACGCGCCGGCCCATGTGTGATCAATCAAGCGGGCGGGCAAGGCTACAGATCGACCTAGCTAGCTTGGTACCCAATGCCAT
GTAGAC--------------------------------------------------------------TGTAGTAGGCTC
GATGATCCGTTCATGGTTGATGCCTGCCACGCCGAGTTATTTGCGTTGAATTAACTCTAGCTGCAGTGCAGCAGTGTGAG
TATGA--ATATATACATTTACCTGCCTGCCGAGTCTCTCGTTGTGACATTTACTACTCTTTGTTGCAGTGAACACCAACT
ATTGGTATAATAAGTTGCAATCGGGTCTAATCTAATGTTTAGCATGACTGATGGGATTCATGACTCATGGGTCCCACGAA
TGATAAAACACATTTAAATATTGGCAAAATAATTGTTCAC-CAAAAATTAGGAATTTTCCCGTGGATACATTTTTAAGCA
GCACTACACCAATTTTG-TTTTGATGAATGATTGATGTTTACTAAAAAAG-------ATTGTGTGGCTGGCAGACAAAGG
CTGAATAAACACAAAAATTAAACAAAACTAATGGCATGTCCAAAATCACACT-TTTTTTCTGGATGCTTGGTAAGGTTTA
TCTAACATACTTTTGACAAAATACAAATATTACTTAAACATGTGCCAATTT---TTTTTGACGTGTTGTAAT-AAATTTA
TAGATGGATTTGACCTCAGATAATGTAGAACAATTATGTAGGCATTGGCATTTCATGTATAATAGGCTATTAAACCATGA
TAACAGTGATCGTAATAATTCATATTC-----------------------------------------------------
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---TTTTCACAAATATATATTTCCAATATTTATTTTAGTGCAACATGAGTTTTTTTTT-------AATAAATCAATCGCC
GGTTTCAAGTAAAGATGGATGGTTTATTAACAATAAGTTTGTTATCTAA-------------------------------
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------------------------------------------TATATCAGTATATAGTTGTATGAATAATTTGAAATATT
GGTCAATGGATGAAGGCAATCCAATGGTACAAAGGTCAGGAATCCAAGCACTATTGGTCGTATCATATCATCTTCAGCCT
ATCAGATTCAGGAATCCAAGC--ACTAGAATGTTCTATGGTTGACCCAGCAGAATGAACAAACCTAAAAAAACAAGTTTT
TCTTTGTTCTAGAAACTAAAAAACTTTAATTTGTG--AAAGAAAAC-AAATAAATTAGTATTATTTTGTACTTTATGGTT
TGCAATGCACAATAT-----------------------------------------------------------------
--------GCACAAACTTGAAAACACAAGCACTTCTTCTTTG---CCCTCGAATTTTCCATACATTAAATCCAAACTTTT
TTCTTCCAAATGAATTGCCATTACTTTTTTAGTTCATGATTTACAATTCACAAAGATCACATTGTAGGCCTTCTCATTTC
TTCTAGAATCTTACATACTTTAGTGCCGCAATTTTTTTTGTCTTCTAGAAGAATTTTCATTCATTTTTACTTTATCATTT
TGTATTAAAGACTATGAAAAGATGTTCATAAGTTTCATTTGTCTTTAAAGATGCAATACTAGCTACTGAGATACTTAAGA
CAAATTTTTTGGATATATTAA-
>chr7D_1060
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-------------------------------------ACATCGAGATCAGATGGCCGAGCAGGGGAGCAAGACGACGAGC
TGGTGGAGGAGGTTCCGGTGGCTATACGCGGTGCGGTGCACGTTGGCGTGCGTGGTCACCCTGGTGGCCGTGGCGGTGAT
CGTCCGGGCGGTGGTGGTGATGCTCCGCCCCGAGAAGCTCCAGCTGAAGCTCGCCGCCGGCCGCGTAGCTGCCAACTACA
TACCGTCGCTGCCACCCCCGGGCAACAAGGTGTCGCTCAAGTTCGTCCTCAGGGCCTACAACCCAAGCGGGCGCGCCACC
CTCGAGTACGCCAACGTCACCGTCCGGCTCACGGACG---------CGTCGTCGTCATCTTCTTCGGCGGAGGCGCCTAC
AGCGAGGATCGCCGAGTTTGACCTTCCGAAGCCCATCGACGTGACGCAGCAGACATTGAGCGAGGTGCTCGTGCCGTTGT
GGCTGGTGCCGGAGGAGGACCTACCGATGCGTTACGTGCGCGCGCTCTACGAGGGGCGCGGCGTGGCCGGCGCGGAGATG
GAGCTGAGAGGGATCTTGTCCACCCACGTGGCGA---TGTCCACC---------------ACAAGTGTCCTCACCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCGGGCCGGGCGACTACG---CCGCCGCCGACGTGCCCTGCTTCGACAAGTTGG
ACGCCCCGGCTCATGTGTGATCAATCAAGCGGCCGGGCTAGGCTACCTGTCGACCAAGCTAGCT----------------
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>chr7A_1060
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-------------------------------------ACATCGATATCAGATGGCCGAGCAGGGGAACAAGACGACGAGC
TGGTGGAGGAGGTTCCGGTGGCTATACGCGGTGCGGTGCACCTTAGCGTGCGTGGTCACCATGGTGGCCGTGGCAGTGAT
CGTCCGGGCGGTGGTGGTGATGCTCCGCCCCGAGAAGCTCCAGCTGAAGCTCGCCGCCGGCCGCGTAGCTGCCAACTACA
TACCGTCGCTGCCACCCCCGGGCAACGAGGTGTGGCTCAAGTTCGTCCTCAGGGCCTACAACCCAAGCGGGCGCGCCACC
CTCGAGTACGCCAACGTCACCGTCCGGCTCACGGACG---------CGTCGTCGTCATCTTCTTCGGCGGAGGCGCCTAC
AGCGAGGATCGCCGAGTTCGACCTTCCGAAGCCCATCGACGTGATGCAGAAGACATTGAGCGAGGTGCTCGTGCCGTTGT
CGCTGGTGCCGAAGGAGGACCTACCGATGCGGTACGTGCGCGCGCTCTACGAGGGGCGCGGCGTGGCCGACGCGGAGATG
GAGCTGAGAGGGATCTTGTCCACCCACGTGGCGA---TGTCCACC---------------ACAAGTGTCCTCACCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCGGCCCGGGCG---ACTACGCCGCCGCCGACGTGGCCTGCTTCGACAAGTTGG
ACGCCCCGGCTCATGTGTGATCAATCAAGCGACCGGGCTAGGCTACCTGTCGACCAAGCTAGCT----------------
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>chr7D_1109
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------AGGACGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCGTCCGTGGTGACCGTGCTGGCCGTGGCGGTGAT
CGTTCGGGCCGTGGTGGTGATGCTCCACCCCGAGAAGCTGCAGCTGAAGCTCGCCGGCGGCCGCGTGGCAGTCGACTGGA
TCCCGTCGATGCCGCCGCCGGGCAATGTCGTGGCGCTGAACTTCGTCCTCAGGGCCAACAACCCCAGCGGGCGCGCCTCC
GTCGAGTACACCAACGTCACCGTCCGGCTCACGGACGTCACGAGCGCGTCGTCGCCGTCGCCGA----------------
--CGAAGATCGCCGAGTTCGACCTGTCGCAGTCCATCCCCGTGCTGCAGCGGACGGCGCACGAGGCGATGGTGAGGGTGA
CGATGACGCCGGGCGAGGACGTTCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATG
ATGCTGCGCGGGGTGTTCCACAGCCACGTAGCGA---TGGCCAGCGGGGACTACGTCACCACCAGCGACCTGGCCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCG---------------------------------------------------
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>chr7A_1109
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------AGGAGGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCGTCCGTGGTGACCGTGCTGGCCGTGGCAGTGAT
CGTTCGGGCCGTGGTGGTGATGCTCCGCCCTGAGAAGCTGCAGCTCAAGCTCTCCGGCGGCCGCGTGGCAGTCGACTGGA
TCCCGTCGATGCCGCCGCCGGGCAACGAGGTGGCGCTCAACTTCGTCCTAGTGGCCAACAACCCCAGCGGGCGCGCCTCC
GTCGAGTACACCAACGTCACCGTCCGGCTGACGGACGTCACGAGCGCGTCGTCGCCGTCGCCGA----------------
--CGAAGATCGCCGAGTTCGACCTGCCGGAGTCCATCCCGGTGCTGCAGCGGACGGCGCACGAGGCGATGGTGAGGGTGG
GGATGACGCCGGGCGAGGACGTGCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATG
ATGCTGCGCGGGGTGTTCCACAGCCACGTGGCCA---TGGCCAGCGGGGACTACGTCACCACCAGCGACCTCGCCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCG---------------------------------------------------
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>chr7B_1109
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------AGGAGGTTCGGATGGCTGTACGTGGCGCGGTGGGCGGTGGCATCTGTGGTGACCGTGCTGGCCGTGGCGGTGAT
CGTTCGGGCCGTGGTGGTGATGCTCCGCCCGGAGAAGCTCCAGCTGAAGCTCGCCGGCGGCCGCGTGGCAGTCGACTGGA
TCCCGTCGATGCCTCCGCCGGGCAACGTCGTGGCGCTGAACTTCGTCCTCAGGGCCAACAACCCCAGCGGGCGCGCCTCC
GTCGAGTACACCAACGTCACCGTCCGGCTCACGGACGTCACGAGCGCGTCGTCGTCGTCGCCGA----------------
--CGAAGATCGCCGAGTTCGACCTGTCGCAGTCCATCCCCGTGTCGCAGCGGACGGCGCACGAGGCGGTCGTGAGGGTGA
CGATGACGCCGGGCGAGGACGTGCCGATGCGGTACGTGCGGGCGCTCTTCGAGGGGCGCAGCGTCGACGGCGTGGAGATG
ATGCTGAGCGGGGTCTTCGCCAGCCACGTAACGACGATGGCGAACGGGGAG---GTCACGACCAAGGACCTCGCCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCG---------------------------------------------------
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----------------------
>chr7D_1320
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---------------------------------------------------------ACAACCCCGGCGGGCGCGCCACC
CTTGTTTACACCAACTTCACCGTCCGGCTCATGGACG---------CGTCGGCGG---------CGGCGGCGTCACCTAC
TGCGAGGATCACCGAGTTTGACCTGCCGCAGCCCATCGACGTTCCGCAGCGTATGGCGCACGAGGCGACCGCGGTGGCCC
AGCTAGAGCCGCCGGAGGACCTGCCGATACGGTACGTGCGCGCGTTCTACGAGGGTCGCGGCGTGTCCGGCGCGGAGATG
GAGCTGAGCGGGGTCTTGTCCACCCGCACGGTGA---TGGCCACC---------------ACCAGCGTCCTCCCCACGTA
CTACTGCTGGCCGGTGACCATCGCCGTCAGCCCGGGCG---ACT---CCTCCGCCGACGTGCCCTGCTTCGAAAAGCTGG
ACGCGCCGGCCCATGTGTGATCAATCAAGCGGGCGGGCAAGGCTACAGGTCGACCTGGCTAGCTTGGTACCT--------
-----------------------------------------A-----CCTATCTGTA-ACTGTAGTATTGTAGTAGGCTC
GATGATCCATGCATGGTTGATGCCTGCCATGACAATTTATTTGTGTTGAATTAACTCTAGCTGCAGTGCAGCAGCGTGAG
TATGAATATATAT--ATTTACCTGCCTGTCGAGGCTCTCGATGTGACATGTACTACTCTTCGTTGCAGCGAACACCATCT
ATTGGTGTAATAAGTTGCAATAGGGTCTAATCTAATGTGTAGCATGACTGACGGGA------------------------
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>chr7D_2062
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-----------------------------------------------------------ATGAATCATGGGTCCCACCAA
TGTTAAAACACACTTAAATATTGGCAAAATAATTGTTCAC-CCAAAATTAGGAATTTTCCCGAGGATACATTTCTAAGCA
GCACTACATCAATTTTG-TTTTTATGGATGATTAATGTTTACTAAAAG--------AATTGTGTGGCCGACAGACAAAGG
CTGAATAAACACAAAAATTAAACAAAACTAATTGCATGTCCAAACA-TCACACTTTTTTCTGGATGCTTGCTAAGGTTTA
ACTAACATACTTCTGACAAAATACAAATAGTACTTAAACATGTGCCAAAAACAATATTTGATGTTTTGTAATGAAATTTA
TAGATGGATTTGACATCGGATAATGTAGCACAATTATGTAGCCATTGGTATTTCATGTATAATAGGCTATTGAACCATGA
TAAAAGCGATCGTAATAATTCATATTC-----------------------------------------------------
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---TTTTGATGAATATATATTTCCAATATTTATTTTAGTGCAACATGAGTTTTTATTTTTGTAAAAATAAACCAATCACA
GGTTTCAAGTAAAGATGGATGGTTTATTAACAATAAGTTTGTTATCTAA-------------------------------
--------------------------------------------------------------------------------
------------------------------------------TATATC-------------ATGAATAACTTGGAACATT
GGTCAATGGATGAAGCCAATCCAATGGTACAAAGGTCAGGAATCCAATCACTATTGGTCGTATTATATCATCTTCAGCCC
ATCAGATTCTGCCACATTTACTAACTAGAAGGTTTTATGGTTGAGCTAGTAGAATGAACAAACCTATAAAAACAAGTTTT
TCTTTGTTCTAGAATCTAAAAACATTTAATTTGTG--AAAAAAATCTAAATAAATTAGTATTATTTTGTACTTTATGGTT
TGCAATGCACAATAT-----------------------------------------------------------------
--------GCACAAACATGAAAACACAAGCACTTCATCTTTG---CCCTCGAATTCTCCATACATTAAATCCAAACTTTT
TTCTTCCAAATGAATTGCCATTACCTTTTTAGTTCATGATTTACAATTAACAAAGATCACATTGTAGGCCTTCTCATTTC
TTCTAGAATCTTACATACTTTAGTGCCGTAATTTTTTT-GTCTTCTAGAAGAGTTTTCATTCACTTTTACTTTATGATTT
TGTATTAAAGACTATGAAAAGATGTTCATAAGTTTCATTTGTCTTTA---------------------------------
----------------------
>SNPs
SS----------S-----S------------------------------------S--------------------S---
------------------S-----S--------------S-------S-----S--S----------S--SSSSSS----
S-----S------S-----------S--------SSSSSS-SS---------S-----S-S---S---------------
---------------SSS---S-S--S--S----------SS---------SS---------------S-----------
--S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-------------SS--S-----S---S-S-------S-S-----------S-S----S-S-------
-S----S--S----------------S-----------------------------------------------------
-----------------------------------------------------SS-------------------------
------------------S-S---------------------S---------------S---------------------
--------------------------S----------------------------------------------S------
--S------------------------------------------------------------S----------------
-------------------------------------------------S-S----------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------S-S--------------------S---------------
--------------------------------------------------------------------------------
----------------------S--S------S---------------------S-------------------------
-----------------------------------------------------------------------SS-SSSS-S
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S------S---------------
------------------S-------------------------------------------------------------
-----------------------------------------------------S------------------S-S-----
----S-----------------------S-----------------S-S-------------------------------
----------------------------------------S---------------------------------------
--------S-------SS-----------------S-------------------------------S------------
-----------------------------SS-----------------S------S--S--S------------------
---S----------------------------------------------------------------------------
----------------------------------S--S-----S-------------S----------------------
---------------S----------------------------------------------------------------
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-------------------------------------------------------------------S------------
---------S----------S-----------------------------------------------------------
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------S--------------S----------------------------------------SS----------------
-----------------S------------------------------S--------S----------S-SS--------
--------SS-------S----------------SSS------S---------S---S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-S--------------S----------------------S---------------------SS---S------------
----S-------S-----S--------SS-S-----------S-------------------------S-----S-----
------S---------------------------------S------S-----SS---------------------S---
--SS-----------------S
>forward_439
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-------------------TACCTCATCCGAGTCAGGCA-----------------------------------------
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----------------------
>reverse_1939
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------------------AATGCCTGCCATGACGAGTT------------------------------------------
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----------------------
>forward_1059
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-------------------------------------------------------------------------------C
AGTACACGTTTCCCCGACA-------------------------------------------------------------
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----------------------
>reverse_2308
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-------------------------------------------------------------------GTGCGGACAAAGG
CTGAATA-------------------------------------------------------------------------
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----------------------
>forward_1713
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-------------GTGACCATCACCATCGTCGT-----------------------------------------------
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----------------------
>reverse_4223
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--------------------------------------------------------------CGATATCATCTTCAGCCC
ATCAGA--------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------
