>input_sequence_56375
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--------------------------------------------------------------------------ATGGTT
CCATCAATGGCGAGGAAGCGCAAGGCATCCGACTCCGACGACGTCTCTGACACTGACATCGACGCCGGCATACCTCTATC
ACTAGCTTCGACGGACGCGTGGACGACGTCCACGGTTGCGGCTGCGACGGCGGCGAGGCAGCAGCAGCGGGGTAGGAAGC
GGTTCGTGGGCGTGCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAGATCAAGGACACGATCCAGAAGATCCGCGTGTGG
CTCGGCACCTTCGACACCGCCGAGGAGGCCGCCCGCGCCTACGACGAGGCTGCCTGCCTCCTCCGTGGCGCCAACACCCG
CACCAACTTCTGGCCCCGCCCCTCGCCGCCCGCCGCCTTGCA---GCCGCCGCCGCCGGCTATGTTGTCGATGCAGGCGC
CGGCGTTGCCTTCCAAGGTCTCCAACCTCCTCCTCCTCCGCCTCAAGGCCCGCAACCAGCAGCTCCTCCTCAACGACGCC
ACGGCGCCGCAAGAGGCTGCACTGCTGCAGCAGCAGATGCAGAAGCAGATGTCCTCGTCGACGTCGTCGTGCCAAGAATC
ATACATCCATGGCCGTGACGACGAGTACTGCTTCCAGGTAGACGACTTTCTGAGCGAGGAGTGCAACAACTCGCCAGAAA
TGGAG---------------GAGGAAGAAGAAGAGGTGGAGGAAGAAGAAGAGGCGGAAGAGGAGGAGGAGCTGGACTTC
CAGTTCATGGATAAGTCGACGGTGGCGGGAGATGAGGACGCCGGGCTCTGCTCCCCGTTCGAGATGGTCGCCGCAGAGCT
CGGCGGCTCGGCGCCGGTGGAGGCTAACGACGTGGACGGCGAGCCTGCGACGGCGGTGCAGGAGGCGATGAGGAGGATGG
ACTACGAGAGGAAGGTGTCCGCATCGTTCTACGCGCTCAGCGGTGTGTCTGAGTGCCTTAGGATGCGCCT---CGGCGGC
GCCTCCGCCGCGCACGACCAGCTCTCCGGCCTGCGCGAGGCGTGCCGCAAGAAGCAGAGGGTGGCGATGCAGCAGCCAGC
ATCGGAGCAATCCTCGGGATCAGCAGCTGCTGCTGCTGCTGATCATGGCACGGAGGAGGATGGTAAAGCTTACGTGCAAG
AGGAGTGTTCAGGCAGCAGCAGCGGCAGCAGCAGCCTCACAGAGGCGGCGAGCTCGTCGTCACCGGAGGCGGCGAACGTC
AGCAGCGACGGCGACGTGCTGCTGTGGAGCTCCCTGGATCTGGCGCCCATCTGCTACATGGCATAG--------------
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>chr5B_1_TraesCS5B01G077300
TAGGTCACCCCTCCCTCGTCGTACTAGACCGGCCTGAATCATTTTCTTAGGCCGAGTGGCAACAACCTGAAAATGCCGAC
CAATCCCATCTGACCGGAGGGACAAGAAATATAATTATATTAATTCGGTACTACGAAATGATTTT-----TAGTAAAAAA
AACATTGCTTCTATTTTTTAAACACCATATGTTTTTTTG-AAGAATTTTAGGCTTTTGGGCGGTG-TAAAAATTGGAGCT
CAACGGG----------------CGGGCTTTGGGCCAACCCGCTGAGCCGAGCTGCCCATGCTTAGGTCTACCCTATACA
AACTTTGAGCCTTAGTATAGTGGTTTAATCATCTTTTTTTCTTGCATATATAAATCATTCCACACAGAAGTTTAGCCCGA
TGAGGAATCAAAGAGGTCTTGAACTCGAAATTTCTTGGCTCTCATACCATATTTAGTATCCATGCAGCAATACACTCCTA
CAAAAAAGGCCAGCAAGATATACACTCATACTTTGAAGTCCAAGAGGACTAGGTGTACCTAGCTAGTTTTACACCAACTA
AATCATATATGTATAGTCATATGATCCTGTCAATGACTAGGCCAACACGACCACACCCTCATCCTTAGCTAAGCAGATTC
AAAAGACAGCTTTTCACAGCATGAAGACATGAATTAACTAGAGATACAATCTCTCTCGGTAGATTTCCTTGTCCCCCCAT
ATGTTAAGCAGAAGAATTAAAC--AATGCAATGCAATTTTTGTACTCCCAATCAATGACACT-------AACTCATCACC
ATTAACAATATAAATGCAACAGATTGCATACAAATACTTATAGTAAACTTATACTCCTATGAATTTATAAGAATGCACAA
ATGAGCTAGACTAGTACTAGCACACACACAAGCAACAAAAGGCATCTTCCTCATCCTCGCTTGTCTCCACTCCTTCCTCT
CCT-CCCTATATATACTCCTTACCTGATCATCTCTTTTCAGCCT-CAGTCCATACTCCACGCCGAGCCGGATCGATGGTT
CCATCAATGGCGAGGAAGCGCAAGGCATCCGACTCCGACGACGTCTCTGACACTGACATCGACGCCGGCATACCTCTATC
ACTAGCTTCGACGGACGCGTGGACGACGTCCACGGTTGCGGCTGCGACGGCGGCGAGGCAGCAGCAGCGGGGTAGGAAGC
GGTTCGTGGGCGTGCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAGATCAAGGACACGATCCAGAAGATCCGCGTGTGG
CTCGGCACCTTCGACACCGCCGAGGAGGCCGCCCGCGCCTACGACGAGGCTGCCTGCCTCCTCCGTGGCGCCAACACCCG
CACCAACTTCTGGCCCCGCCCCTCGCCGCCCGCCGCCTTGCA---GCCGCCGCCGCCGGCTATGTTGTCGATGCAGGCGC
CGGCGTTGCCTTCCAAGGTCTCCAACCTCCTCCTCCTCCGCCTCAAGGCCCGCAACCAGCAGCTCCTCCTCAACGACGCC
ACGGCGCCGCAAGAGGCTGCACTGCTGCAGCAGCAGATGCAGAAGCAGATGTCCTCGTCGACGTCGTCGTGCCAAGAATC
ATACATCCATGGCCGTGACGACGAGTACTGCTTCCAGGTAGACGACTTTCTGAGCGAGGAGTGCAACAACTCGCCAGAAA
TGGAG---------------GAGGAAGAAGAAGAGGTGGAGGAAGAAGAAGAGGCGGAAGAGGAGGAGGAGCTGGACTTC
CAGTTCATGGATAAGTCGACGGTGGCGGGAGATGAGGACGCCGGGCTCTGCTCCCCGTTCGAGATGGTCGCCGCAGAGCT
CGGCGGCTCGGCGCCGGTGGAGGCTAACGACGTGGACGGCGAGCCTGCGACGGCGGTGCAGGAGGCGATGAGGAGGATGG
ACTACGAGAGGAAGGTGTCCGCATCGTTCTACGCGCTCAGCGGTGTGTCTGAGTGCCTTAGGATGCGCCT---CGGCGGC
GCCTCCGCCGCGCACGACCAGCTCTCCGGCCTGCGCGAGGCGTGCCGCAAGAAGCAGAGGGTGGCGATGCAGCAGCCAGC
ATCGGAGCAATCCTCGGGATCAGCAGCTGCTGCTGCTGCTGATCATGGCACGGAGGAGGATGGTAAAGCTTACGTGCAAG
AGGAGTGTTCAGGCAGCAGCAGCGGCAGCAGCAGCCTCACAGAGGCGGCGAGCTCGTCGTCACCGGAGGCGGCGAACGTC
AGCAGCGACGGCGACGTGCTGCTGTGGAGCTCCCTGGATCTGGCGCCCATCTGCTACATGGCATAGGCTGACCAGTTTTG
TTGTTGTGTTCCATGGTTGCAACTTGCAGTTAGGTTGTGTTGGTGTGGAATTCGTTTTGCTCCATGCATGGCAGATGGCT
CATATGAGAAGCC----CTGGCCATCACTTGCTTAATTACCAATTTATTTTGAGAAACAGTGGTAATAACAACAGAAACG
AACTTGCATGCACCTCGGCTGGTAGTGCTTCAAAGTAGAACTCATCTACACATGAAACTAGTACGTATGAGATTCAGATA
ACAGAGCCTTCGTCGCCGTTGCATCC-------AGCCGCCACCGCCGACGTTTAGCCGGAGTTGAGAGGGTGGGGTCCTA
ACCCCTTTCGTCATACTACATGGTACGAGTACCAATTTTCCATCAGTTTTCCCATGGATACCACTCTTCAACCTCAAGGC
CACCAACAGGCGTCAGAAAGAATGCACAGATGAGGCTTACAAGAATCTTTCCACACTAATTTTTTTTCATGAAGATAACT
TTAGAAACGTGTTCATGCATGGAGTTGAATTTCTCAAGTTCAGATATTGGGGCCAAAAT-----------GTGCAGTACT
AGTATAGTGCCAAAGAAACAGTCAAGAGTTTATCATATCATTCTTTTCTTCTTCTCTATACAACAGTGTGTGTGATACAC
AAAACTAACACTGATAATCTGGAAAAGCTCAAGCTAGAACTTTGCAGATGCACTCAAACCTCTGAATCTCCATCATGCAG
AACATGTTAATGTTTTTGGGCTATTATAGCAAGCGTCATGAGCGTCCTAATAAAACTGGGCGAACCGCGTTTGTGAAATC
TTCGTGAAACTTCTGCTCTGAAAACCTTTGAGCACGCTTCCGTGCTGCTGCCGCCATTTCTCGCCTCTCTGGCTCCGGCA
TCCTCAAGACCTTGAGGATTGCCTCCGCAAATTCTTCCTTCCTGGAGGCCAGAAACCCTGTCTGGCGGCTGTCCTCCTCT
AGCACAATATCCATCATTGGTCCTGCAGATTTATGGGCTGCAAAAAAT
>chr5D_6
-----CACCCCTCCCTCGTCGTACCAGAC----CTAAATCATTTTCTTAGGCCGGGTTGCAACAACCTGAAAATGCCAAC
CGATCCCATCTAACCAGAGGGACGAGAAATATAATTATATTAATTCGGTACTAC--AATAATTTTTTTAGTAATAAAAAC
AACATTGCTTCTATTTTTTTAACACCATATC-TTTTTTG-AAGAATTTTAGGCTTTTGGGCGGGGTTAAAAATTGGAGCT
CATAGCCATTATGACTTGACGGCAGGGCTTTGGGCCAACCCGCTGAGCCGAGCTGACCATGCTTAGGTCTACCCTATACA
AACTTTGAGCCTTATCATAGTGGTTTAATCATC----TTTCTTGCATATACAGATCATTTCACACAAAAGTTTAGCCCGA
TGAGGAATCAAAGAGGTCATGAACTCAAAATTTCTTGGCTCGCATACCATATTGAGTATCCATGCAGCAATACACTCCTA
CGAAAAAGGCCAGCAAGATATACACTCATACTTTGAAGTCCAAAAGGACTAGGTGTACCTAGCTAGTTCTACACCAACTA
AATCATATATGTATAGTCACATGAACCTGTCAATGACTAGGCCAACACGACCACACCCTCATCCTTAGCTAAGCAGATTC
AAAAGACAACTTTTCACAACATGAACACACGAATTAACTAGAGATCCAATCTCTCTCACTAGATCTCCTTGTCCCCCCAT
TTGTTGAACACCACAATTTA--CAGATGCAATGTATTTTTTGTATTCCCAATCAGTGCTACT-------AACCCATCACC
ATTAACAATATAAATGCAGCAGATTGCATATAAATACTTATAATAAACTTA------CATGAATTAATATGAATGCACAA
ATGAGCTATAGGC-TAGTAGCGCACACACAAGCAACAAAAGGCATCTTCCTCATCCTCGCTTGTCTCCACTCCTTCCTCT
CCTCCCCTATATATACTCCCTACCTGATCATCTCTTTTCAGCCTCCAGTCCATACTCCACGCCGAGCCGGATCGATGGTT
CCATCCATGGCGAGGAAGCGCAAGGCATCCGAC------GACGTCTCTGACGCTGACATCGACGTCGGCATACCTCTATC
ACTAGCTTCGACGGACGCGTGGACGACGTCCACGGTTGCGGCTGCGACGGCGGCGAGGCAGCAGCAGCGGGGTAGGAAGC
GGTTCGTGGGCGTGCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAGATCAAGGACACGATCCAGAAGATCCGCGTGTGG
CTCGGCACCTTCGACACCGCCGAGGAGGCCGCCCGCGCCTACGACGAGGCCGCCTGCCTCCTCCGCGGCGCCAACACCCG
CACCAACTTCTGGCCCCGCCCCTCGCCGCCTGCCGCCTTGCAGCCGCCGCCGCCGCCGGCTATGTTGTCGATGCAGGCGC
CGGCGTTGCCTTCCAAGGTCTCCAACCTCCTCCTCCTCCGCCTCAAGGCCCGCAACCAGCAGCTCCTCCTCAACGACGCC
ACGGCGCCGCAAGAGGCTGCGCTGCTGCAGCAGCAGATGCAGAAGCAGATGTCCTCGTCGACGTCGTCGTGCCAAGAATC
ATACATCCATGGCCGTGACGACGAGTACTGCTTCCAGGTAGACGACTTTTTGAGCGAGGAGTGCAACAACTCGCCAGAAA
TGGAG------------GAGGAGGAAGAAGAAGAGGTGGAGGAGGAAGAAGAGGTGGAAGAGGAGGAGGAGCTGGACTTC
CAGTTCATGGACAAGCCGGCGGCGGCGGGAGACGAGGACGCCGGGCTCTGCTCCCCGTTCGAGATGGTCGCCGCAGAGCT
CGGCGGCTCGGCGCCGGTGGAGGCTAACGACGTGGACGGCGAGCCTGCGACGGCGGTGCAGGAGGCGATGAGGAGGATGG
ACTACGAGAGGAAGGTGTCCGCATCGCTCTACGCGCTCAGCGGTGTGTCCGAGTGCCTCAGGATGCGCCTCGGCGGCGGC
GCCTCCGCCGCGCGCGATCAGCTGTCCGGCCTGCGCGAGGCGTGCCGCAAGAAGCAGAGGTTGGCGGTGCAGCAGCCAGC
ATCGGAGCAATCCTCGGAAC---CAGCTGCTGCTGCTGCTGATCATGGCACGGAGGAGGACGGTAAAGCTTACGTGCAAG
AGGAGTGTTCAGGCAGCAGCAGCGGCAGCAGCAGCCTCACGGAGGCGGGGAGCTCGTCGTCACCGGAGGCAGCGAACGGC
AGCAGCGACGGTGACGTGCTGCTGTGGAGCTCCCTGGACCTGGCGCCCATCTGCTACATGGCATAGGCTGATCAGTTTTG
TTGTTGTGTTCCATGGTTGCAACTTGCAGTTAGGTTGTGTTGGTGTGGAATTCATTTTGCTCCATGCATGGCAGATGGCT
CATATGAGAAGCC----CTGGCCATCACTTGCTTAATTACCAATTTATTTTGAGAAACAGTGGTAATAACAATAGAAACG
AACTTGCATGCACCTCGGCTGGTAGTGCTTCAAAGTAGAACTCATCTGCATATGAAACTTGCAT---TGAGATTCAGAGA
ACAGAGCCTTCGTCACCGTTGCATCCCCTCCAGAGCCGCCACCGCCGGCGCTTAGCCGGAGTTGAGAGGGTGGGGTCCTA
ACCCCTTTTGTCATAC---ATGGCACAAGTACCA-----------GTTTTCCCATGGACACCACTCTTCAACCTCAAGGC
CACCAACAGGCGTCAGCAAGAATGCACAGATGAGGCTTACAAGAATCTTTCCACACTTAA-TTTTCTCATGTGGATAACT
TTAGAAATCTGTTCATGCATGGAGTTGAATTCCTCAAGTTCAGATATTGTGGTCAAAAT-----------ATACAGTACT
AGTATAGTGCCAAAGAAACAGTCAAGAGTTTATCATATCATTCTTTTGCTCTTCTCTATACAACAGTGTGTGTGATACAC
AAAACTAACACTGATAATCTGGAAAAGCTCAAGCTAGAACTTTGCAGATGCACTCAAACCTCAGAATCTCCATCATGCTG
AACTTGTTAATGTTTTTGGCTATTAGAGCAAAAGGCTATGAGCGTCCTAATAAAACTGGGCGAACCGCTTTAGTGAAATC
TTCATGAAACTTCTGCTCTGAAAACCTTTGAGCACGCTTCCGTGCTGCTGCCGCCATTTCTCGCCTCTCTGGCTCCGGCA
TCCTCAAGACCTTGAGGATTGCCTCCGCAAATTCTTCCTTCCTGGAGGCCAGAAACCCTGTCTCCCGGCTGTCCTCCTCT
AGCACAATATCCATCATTGGTCCTGCAGATTTATGGGCTGCAAAAA--
>chr5A_6
-----CACCCCTTCCTCGTCGTACTAGAT----CTGAATCATTTTCTTAGGCTGAGTTGCAACAACCTGAAAATGCCAAC
CAATCTCATCTGACCAGAGGGGCGAGAAATATAATTATATTAATTTGGTACTACGAAATGATTTGTTTAGTAATAAAAAC
AACATTCCTTCTATTTTTTTAACACCATATC-TTTTTTAAAAGAATTTTAGGCTTTTGGGCGGGTTTAAAAATTGGAGCT
CAAAGCCGTCATGACTTGACGGCCGGGCTTTGGGCCAACCCGCTGAGCCGAGCTGCCCATGCTTAGGTCTACCCTATACA
AACTTTGAGCCTTAGTATAGTGGTTTAATCATCTTTCTTTCTTGCATATACAGATCATTTCACACCAAAGTTAAGCCTGA
TGAGGAATCAAAGAGGTCTTGAACTCAAAATTTCTTGGCTCTCATACTATATTGAGTATGCATGCATCAACACACTCCTA
CGAAAAAGGCCAGCAAGATATACACTCATACTTTGAAATCCAAGAGGACTAGGTGTACCTAGCTAGTTTCACACCAAGTA
AATCATATATGTATAGTCATATGAACCTGTCAATGACTAGGCCAACACGACCACACCCTCATCCTTAACTAAGCAGATTC
AAAAGACAACTTTTCACAGCATGAACACATGAATTAACTAGATATCCAATCTCTCTCACTAGATATCCTTGTCCCCCCAT
TTGTTGAGCACCACAACTTAAACAAATGCAATGCAATTTTTGTACTCCCAATCAGTGCTACTAAGTACTAACCCATCACC
ATTAACAACATAAATGCAACACATTGCATGCAAATACTTAG--TAAACTTA------TATGAATTAATATGAATACACAA
ATGAGCTAG------ACTAGCACAAACACAAGCAACAAAAGGCATCTTCCTC------------------------CTCT
CCTCCCTTATATATACCCCTGACCTGATCATCTCTTTTCAGCCTCCAGTCCATACTCCACGCCGAGCCGGCTCGATGGTT
CCATCCATGGCGAGGAAGCGCAAGGCATCCGAC------GACGTCTCTGACACTGACATCGACGTCGGCATACCTCTATC
ACTAGCTTCGACGGACGCGTGGACGACGTCCACGGTTGCGGCTACGACGGCGGCGAGGCAGCAGCAGCGGGGCAGGAAGC
GGTTCGTGGGCGTGCGGCAGCGGCCGTCCGGCCGGTGGGTGGCGGAGATCAAGGACACGATCCAGAAGATCCGCGTGTGG
CTCGGCACCTTCGACACCGCCGAGGAGGCCGCCCGCGCCTACGACGAGGCCGCCTGCCTCCTCCGCGGCGCCAACACCCG
CACCAACTTCTGGCCCCGCCCCTCGCCGCCTGCCGCCTTGCAGC---CGCCGCCGCCGGCTATGCTGTCGATGCAGGCGC
CGGCGTTGCCTTCCAAGGTCTCCAACCTCCTCCTCCTCCGCCTCAAGGCCCGCAACCAGCAGCTCCTCCTCAACGACGCC
ACGGCGCCGCAAGAGGCTGCGCTGCTACAGCAGCAGATGCAGAAGCAGATGTCCTCGTCGACGTCGTCGTGCCAAGAATC
ATACGTCCATGGCCGTGACGACGAGTACTGCTTCCAGGTAGACGACTTTTTGAGCGAGGAGTGCAACAACTCGCCAGAAA
TGGAGGAGGAAGAAGAAGAGGTGGAGGAAGAAGAGGTGGAGGAAGAAGAAGAGGTGGAAGAGGAGGAGGAGCTGGACTTC
CAGTTCATGGACAAGCCGACGGTGGCGGAAGACGAGGACGCCGGGATCTGCTCCCCGTTCGAGATGGTCGCCGCCGAGCT
CGGCGGCTCGGCGCCGGTGGAGGCTAACGATGTGGACGGCGAGCCTGCGACGGCAGTGCAGGAGGCGATGAGGAGGATGG
ACTACGAGAGGAAGGTGTCCGCGTCGCTCTACGCGCTCAGCGGTGTGTCCGAGTGCCTCAGGATGCGCCTCGGCGGCGGC
GCCTCCGCCGCGCGCGATCAGCTCTCCGGCCTGCGCGAGGCGTGCCGCAAGAAGCAGAGGGCGGCGGTGCAGCAGCCAGC
ATCGGAGCAGTCCTCAGAAC---CAGCCGTCGCTGCTGCTGATCATGACGCAGAGGAGG---GTAAAGCTTCCATGCAAG
AGGAGTGTTCAGGCAGCAGCAGCAGCGGCAGCAGCCTCACAGAGGCGGCGAGCTCGTCGTCACCGGA---GGCTAACGTC
ACCGGCGACGGGGACGTGCTGCTGTGGAGCTCCCTGGACCTGGCGCCCATCTGCTACATGGCATAGGCTGACCAGTTTTG
TTGACGTGTTCCATGGTTGCAACTTGCAGTTAGGTTGTGTTGCTGTGGAATTCGTTTTGCTCCATGCATGGCAGATGGCT
CATATGAGAAGCCACCCCTGGCCATCACTTGCTTAATTACCAATTTATTTTGAGAAACAGTGGTAATAACAACAGAAACG
AACTTGCATGCACCTCGGCTGGTAGTGCTTCAAAGTAGAACTCAACTGCATATGAAACTTGCAT---TGAGATTCAGAGA
ACAGAGCCTTCGTCGCCGTTGCATCCCCTCCAGAGCCGCCACCGCAGGCGTTTAGCCCGAGTTGAGAGGGTGGGGTCCTA
ACCCCTTTTGTCATAC---ATGGCACGAGTACCAATTTTCCACCAGTTTTCCCATGGACACCACTCTACAACCTCAAGGC
CACCAACAGGCGTCAGCAAGAATGCACAGATGAGGCTTACAAGAATCTTTCCACACTTGA-TTTTCTCATGTGGATAACT
TTAGAAATGTGTTCATGCATGGAGTTGAATTCCTCAAGTTTAGATATTGGGGCCAAAATATGGCCAAAATATACAGTACT
AGTATAGTGCCAAAGAAACAGTCAAGAGTTTATCATATCATTCTTTTGTTCTTCTCTATACAACAGTGTGTGTGATACAC
AAAACTAACACTGATAATCTGGAAAAGCTCAAGCTAGAACTTTGCAGATGCACTCAAACCTCAGAATCTCCATCATGCTA
AACTTGTTAATGTTTTCGGCTATTAGAGCAAAAGGCTATGAGCGTCCTAATAAAACTGGGCGAACCGCCTTAGTGAAATC
TTCATGAAACTTCTGCTCTGAAAACCTTTGAGCACGCTTCCATGCTGCTGCCGCCATTTCTCGCCTCTCTGGCTCCGGCA
TCCTCAAGACCTTGAGGATTGCCTCCGCAAATTCTTCCTTCCTGGAGGCCAGAAACCCTGTCTGGCGGCTGTCCTCCTCT
AGCACAATATCCATCATTGGTCCTGCAGATTTATGGGCTGCAAGAAAT
>SNPs
SSSSS------------------------SSSS------------------------S-------------------S--
---------------S-------S------------------------------------------------S------S
-------------------S----------SS-------------------------------S----------------
---S-SS-------------------------------------------------------------------------
------------------------------------S-------------S-S------S------S-------------
--------------------------S--------------------------S--------------------------
-S------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------S----------------S-------------------S-----------SS-----S---------------
S----S----SS-S----S--S--------------------------------S--SS-------------S-------
------------------------------------------S--------SSSSSS--------S---S----------
----------SSSS------------------------------------------------------------------
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-----S---------------------------SSSSSS-------------------------S---------------
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--------------------------------------------------S--------------S--------------
------------------------------S-------------------------------------------------
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--------------------S-----------------------------------------------------------
-------------------------------------------------S------------------------------
------------------------------------------------------S-------------------------
-----------S---S----------------S-----------------------------------------------
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--------------------------S----------------------S--------S---------------------
-------------S---S------------------------------------------------S-------------
-----------------S-SSSS-------------------------------------S-------------------
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-----------S--------------------------S-----------------------------------------
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-----------------------------------------------S--S--------S-S-SSSS-----------S-
-----------------------------------------------S--------------------------------
--------S-------SSS----S------------------S---------------S---------------------
----------------S----------------------------------------S-SS----S-----SS-------
-------S-----------------------S--------------------------------------S-S-------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------S---------------S-
---S---------------SSSS-SSSSSS--SS-SS-------------------------------S--S--------
---S----------------------------------------------------------------------------
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>forward_31
-----------TCCCTCGTCGTACTAGACCG-------------------------------------------------
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>reverse_1076
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-----------------------------------CGACGACGTCTCTGACACTG-------------------------
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>forward_1046
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------------------------------------------------------------------CCGGATCGATGGTT
CCATCA--------------------------------------------------------------------------
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>reverse_3066
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-------------------------ATAGCAAGCGTCATGAGCGT-----------------------------------
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