>input_sequence_56368
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TTATTTATAGACATGGATGATGTATTTTCA
CATTGGCCCAAAATGATGACCCTTTTGGTTTTGGGAGGTTTCATAGTACTGACTGAGGCTGGTGCAAAGAATAGGTT-CT
GTGTGTTGTGTAACTCTGCACTGTTTGTTATAACTT-GTAGTGTTGAGGACTACATTCTCT----------------TCT
TTCTAGCAGTGTTGGTGATCGTTCTCACTTGAAATCGCAGGTTTCAACCCTTAAGAAGCTCAAGATGGCCGCCAATGTTG
GGGAATCAGCGGCAGTTGGTGGCAGCAGCAGCGATGCAGCTGGAGGGAGCTTCGAGTGCAATATTTGCTTTGAGTTGCCG
CAAGAGCCAATAGTAACTCTCTGTGGCCACCTATTCTGCTGGCCGTGCCTCTACAGATGGCTGCACATGCACGCCAACAC
ACCAGAGTGCCCTGTGTGCAAGGCCATTGTTGAAGAAGACAAGCTTGTCCCCCTTTATGGCCGTGGCAAGGACCGCGTCG
ACCCAAGGTCAAAGAACACGCCTGGAGGCGACATTCCTCAGCGCCCAGCTGGCCAGAGGCCTGCTACAGCCCAACAGGCT
GATCCGAACAACAATTTTGGCAACGCCCATGCAAATCCATGGTTCATGGGCATGGGGGGCGCGGGGGCGGGGGCGGGAGT
TCCACTGGCGAATGGACGGTGGGGCAACTATGCGTTCTCGGCTGCGTTTGGGGGCCTGTTCCCTATGCTTAGCTTTCAAA
TGCATGGGTTCCCAGATCCAGCTGCATATGCTCAGCCTGCCGGGTTTCACTATGGGTTTGGTCACGGCCATGGGTTCCAT
GGCGGGCATATGGGGCACGCCCACGGCGTCCCCCGCCAAGGACCGCTAGGGCAGCAGCAGCAGCAGGCAGATGTCTACCT
GAAGGCCCTTCTTATCATGGTCGGAGTTCTTGTGATCGCAAGCCTCCTCGCAGCTTAAAGTTGTTACTGCTATCATCAAA
ATTGTGGTGGTGTTTGGTAGGAGTTGCCAGAGCATACCTTTGGTGTAGGCTTATCTCTACCAAGTGGGAGACGAGTTAAT
TCTGTTCGTTC--ATGTTTGTATGAAGTGTCCATGGAGTTTCTGTATCTAGATTTGGATGG---------------TGAT
ACATCATCCTGTGTTTTGTAGTTTTGACTCCTTTGATTTGATAAA-----CGTGGTGTACAATTGGTGGGAGGTCATCTC
CCCGTGTCTGTAACCTGTATCAATCTAGATTGGACAGTGTAGATGAGTACATTTACATGTA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G290600
GGCGTCCAGATTCTGCTGGAATCTTCGAGGCGTGCCGCGCGCCCTCCCCGATTT-TAT-AAGGGCCGTCGTGGTCCCGTC
CCGGCCATCGCCGTCGATTCGCCTTGCAGGCAGGC----CTCCGCTCGCCGCTCGCCGC---------------------
-----------TCCCCCTAGGTAAATGGCGCCTGCCCTCCCTCCCTCTTGC----TCCGCGTGAAATTTCCTCGTGATTT
AGGATTTACGAGCATCCTGTGGGGGCGGATGTGATTCGTTCGATGGGGTCT------------G--GGCCGATTCATTC-
GGTATTCTGTCGGCGTCCCGGTGATCCGGGCGAGCCTTGAGTGGTAGGCTTCGGGGTGCTGATCTGCGCTCGGAATTGGA
TCCGTG----GGCGCGGCTTGGTAATTTGGGGTAAATTTGGATTTTTCCTCCCGTTTGTT-AAGAGATT----GATTGAA
TTGATTCAGCAATTCAATATTCCTGAGTAGTTTA-TCAGAAATTAATCTTCTTCTAGAGCGTGAACTGTGAACTCAAATC
GATCTGGTGTAGCCGTTTCTGGTTTCTAGAGGGTCTGATGAATATTCTTCGGTGGATAATCGACAAT-TTTTTTTGTTTG
AGCAGGCTGAACCGTGTAGAT----TATTAGTGATCCTATTGCTGTCGGTACTCAGATTATTTTGTAAGTA---------
--------AGTAGCAAAATCAACGTTTCTGGGAGTCCCTGATCATCAAGTGCCTTGTTTAGCTGAATGCCCTGTGGATTA
GGCTAAATACTGAAATGTTTATGATTAGAGATGTATTAGTATTTCTTATTCCGTATGTCCGGAATTACTTGACGCTCAAA
TGGATGTATCTAACACTAAAATACGTCTAGATACATCTGTTTGAGCGTCTACATCTAGTGCCTCAAGTAATTCCGGATGG
AGGAAGTATTATACTACAACGCAGCTGTATTTTAGCACAGTTGTAACCATGAGCAATCTTTATAGGTGATCTTTTTGTTA
GATTTCCGTTTTG-AAAAATTATCTTGTTAGATTAAGTTGTTTTCTATATTTATTTATAGACATGGATGATGTATTTTCA
CATTGGCCCAAAATGATGACCCTTTTGGTTTTGGGAGGTTTCATAGTACTGACTGAGGCTGGTGCAAAGAATAGGTT-CT
GTGTGTTGTGTAACTCTGCACTGTTTGTTATAACTT-GTAGTGTTGAGGACTACATTCTCT----------------TCT
TTCTAGCAGTGTTGGTGATCGTTCTCACTTGAAATCGCAGGTTTCAACCCTTAAGAAGCTCAAGATGGCCGCCAATGTTG
GGGAATCAGCGGCAGTTGGTGGCAGCAGCAGCGATGCAGCTGGAGGGAGCTTCGAGTGCAATATTTGCTTTGAGTTGCCG
CAAGAGCCAATAGTAACTCTCTGTGGCCACCTATTCTGCTGGCCGTGCCTCTACAGATGGCTGCACATGCACGCCAACAC
ACCAGAGTGCCCTGTGTGCAAGGCCATTGTTGAAGAAGACAAGCTTGTCCCCCTTTATGGCCGTGGCAAGGACCGCGTCG
ACCCAAGGTCAAAGAACACGCCTGGAGGCGACATTCCTCAGCGCCCAGCTGGCCAGAGGCCTGCTACAGCCCAACAGGCT
GATCCGAACAACAATTTTGGCAACGCCCATGCAAATCCATGGTTCATGGGCATGGGGGGCGCGGGGGCGGGGGCGGGAGT
TCCACTGGCGAATGGACGGTGGGGCAACTATGCGTTCTCGGCTGCGTTTGGGGGCCTGTTCCCTATGCTTAGCTTTCAAA
TGCATGGGTTCCCAGATCCAGCTGCATATGCTCAGCCTGCCGGGTTTCACTATGGGTTTGGTCACGGCCATGGGTTCCAT
GGCGGGCATATGGGGCACGCCCACGGCGTCCCCCGCCAAGGACCGCTAGGGCAGCAGCAGCAGCAGGCAGATGTCTACCT
GAAGGCCCTTCTTATCATGGTCGGAGTTCTTGTGATCGCAAGCCTCCTCGCAGCTTAAAGTTGTTACTGCTATCATCAAA
ATTGTGGTGGTGTTTGGTAGGAGTTGCCAGAGCATACCTTTGGTGTAGGCTTATCTCTACCAAGTGGGAGACGAGTTAAT
TCTGTTCGTTC--ATGTTTGTATGAAGTGTCCATGGAGTTTCTGTATCTAGATTTGGATGG---------------TGAT
ACATCATCCTGTGTTTTGTAGTTTTGACTCCTTTGATTTGATAAA-----CGTGGTGTACAATTGGTGGGAGGTCATCTC
CCCGTGTCTGTAACCTGTATCAATCTAGATTGGACAGTGTAGATGAGTACATTTACATGTAATAATCCTCATGTTTGCAC
AAAGTGACAGTTCATGTACCTTTTGACAGCAAGTTCAAGGTGTTGCCATTCTTCGGAAAATATCGTTAAATTTGAATGTA
GGATCTATGTCTATGCTTGTTTGTGAAGGT-------------------------------TGCAGATGGGATATTTCAT
CTTTGTTGGCTATCTCAGAAACTCTCACCACTTGACTGAATCTTCTACTGTAACGGCGAACC---------TGCTCCACA
CACAAGCAGAATCCCCTGTGGCATGTGCAACGAGACCTGTGAATTTGTCTGCACCCAGGCTATTCTGCTGAATCACCAGC
AGCCTC------TTGTGCCGACCACGCAGATGAACTGAACGAAGACAAAGCAAAACAAGCCTGAAACCCAGATTCCCTGA
ACAGTCATGGCACATTCTGTGTGATT-CCCCATGTTCACAGATCGCACTATTTTCCTTAAAGATTGCATGGTTACACAAA
TCATCCACATGCGAACTAAGCCTAACTTAGATGGCCAAGTTCTTTTTGTGGAACTAGACTACCCAGATTCAAATTTTAGA
CCTACATTATGCAAGATCTGCCGGTACATTCTCTCGAAGGTGCTCATAGAAATAGAGTTTGCGTTTCTGTATTCATAGGG
ATGAGTGTGCGCGCGTGTTATGAGTTTCATTAACTCTGTACTGTGTTTAGAAGAAAGAAAAAAAACATCAATATACTTGG
CTAGTTTAGTCGACGCGGGTATATCATCATCGAAATGTAGAGTCGTCGCCATGTATGATTGCA--CTGTTACGGCAACTT
CGAATTTTCGATTATCTTTTACTTG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TATTTTGGGCACCACCGATTCGCATCTATCCAAACCTTTTCCTTCATGGA
GGTAGCTGTCCGAACTTGGCTGTACATGGAACGCCGATTCGTATCTATCCAAACTTTTTCCTTCATGGACGTAGCTGTAC
ATGGACCGCCGATGCAATGCTTTAGCTTGCTCACTTTTATTTTCGCAAAAAGAAAAAGCTTGCTCACTTTTACGT
>chr4D_1
GGCGTCCAGATTCTGCTGGAATCTTCCAGGCGTGCCGCGCGCCCTCCCCGATTT-TATTAAGGGCCGTCGTGGTCCCGTC
CAGGCCATCGCCGTCGATTCGCCTTGCAGGCAGGC----CTCCGCTCGCCGCTCGCCGCCCGCCGCCCGCCGATCGGCCT
CCGCTCGCCGCTCCCCCGAGGTAAATGGCGCCTGCCCTCCCCCCCTGTCGC----TCCGCGTGAAATTTCGTCGTGATTT
AGGATTTACTCGCTTCCTGTGGGGGCGGATGTGATTCGTTCGATGGGGTCTCTCGCTGCGTCCGCTGGCCGATTCATGGG
GGTATCCTGTCGGCGTCCTGGTGATCCAGGCGAGCCTTGAGTGGTAGGCTTCGGGGTGCTGATTTGCGCTCGGAATTGGA
TCCCTG----GGCGCGGCTTGGTGATTTGGGGGAAATTGGGAATTTTCCTTCCGTTTGTTGAAGAAATA----GATTGAA
TTGATTCAGCAATTCAATATTCCCGAGTAGTTTA-TTAGAAATTAATCTTCTTCTAGAGCCTGGACTGTGAACTCAAATC
GATCTGGTGTAGCCGTGTCTGATTTCTAGAGGGTCTGATGAATATTCTTCTGTGGATAATCCATGGAATTTTGTTGTTTG
AGCGGGCTGAAA-GGGTGTAGGTTATATCAGTGATTCTGTTGCTGTGGGTACTCAGATTATTTTGTAAGAAAATAATATG
CTCACCTGAGTAGCAAAATCAACATTTCTGGGAGTCCCTGATCATCAAGTGCCTTATTTAGCTGAATGCCCTGTGGGTTA
GGCTAAATACTAAAATGTTTATGATTAGAGATGTATTAGTATTTCTTACTCCGTATGTCCGGATGTATG-----------
----------TAACACTAAAATACGTCTAGATACATCTGTTCGAGCGTCTACATCTAGAGCGTCAAGTAATTCCGGATGG
AGGAAGTATTA---TACAACGCAGCTGTATTTTAGCACAGTTGTAACCATGAGCAATCTTTATAGGTGATCTTTTTGTTA
GATTTCCGTTTCGAAAAAAAAATCTTGTTAGATTAAGTTTTTTTTTCA---TATTTATT-ACATGGATGATGTATTTTCA
CATTCGCCCAAAATCAAGACCCTTTTGGTTTTGGGAGGTTTCATAGTACTGACTGAGGCTCGTGCAAAGAATAGGTTGCT
GTATGTGGTGTAACTCTCTACTGTTTGTAATAACTTTGTAGTGTTTGCC-----------------------ATAGCTCT
TTCTAGCAGTGTTGGTGATCGTTATCACTTGAAATCGCAGGTTTCAACCGTTAGCAACCTCAAGATGGCTGCCAATGTTG
GGGAATCAGCGGCAGTCGGTGGCAGCAGCAGTGATGCAGCTGGAGGGAGCTTCGAGTGCAATATTTGCTTTGAGTTGCCA
CAGGAGCCAATAGTAACTCTCTGCGGTCACCTATTCTGCTGGCCGTGCCTCTACAGATGGCTGCACATGCACGCAAACAC
ACCAGAGTGCCCTGTGTGCAAGGCCATTGTTGAAGAAGACAAGCTTGTCCCCCTTTATGGCCGTGGCAAGGACCGCGTCG
ACCCAAGGTCAAAGAACACTCCTGGAGTCGACATTCCTCAACGCCCAGCTGGCCAGAGGCCTGCGACAGCCCAACAAGCT
GATCCTAACAACAATTTCGGCAACGCCCATGCAAATCCATGGTTCATGGGCATGGGGGGCGCGGGTGCAGGGGCGGGTGT
TCCGCTAGCGAATGGACGGTGGGGCAACTATGCGTTCTCGGCTGCATTTGGGGGCCTATTCCCTATGCTCAGCTTCCAGA
TGCATGGATTTCCAGATCCAGCTGCATATGCTCAGCCCGCCGGGTTCCACTACGGGTTTGGTCATGGCCATGGCTTCCAT
GGCGGGCA------GCACGCCCACGGCGTCCCCCGCCAGGGGCCGCTAGGGCAGCAGCAGCAGCAGGCAGATGTCTACCT
CAAGGCCCTTCTTATCATGGTCGGGGTTCTTGTGATCGCAAGCCTCCTCGCAGCTTAAATTGGTTACCGCTATCATCAAA
ATTGTGGTGGTGTTTGGTAGGAGTTGCCAGAGCATACCTT-GGTGTAGGCTTATCTCTACCAAATTGGAGATAAGTT---
-CTGTTCGTTCGAATGTTTGTATGAAGGGTCCATGGAGTTTGTGTATCTAGATCTGGATGGTCTTCCTCTGC---ATGAT
ACATCATCCTATGTTTTGTAGTTTTGACTCCTTTGATTTGATAAA-----CGTGGTGTACAATTGTTGGGAGGTCATCCC
CCCGTGTCTGTAACCTGTATCAATCTAGATTGGACAGTGTAGATGAGTACATTTACATGTAATAATTCTCATGTTTGCAC
AAAGTGACAGTTCATGTACCTTTTGACAGCAAGCTCAAGGTGTTGCCATTCTTGTACAAATATCGGTAAATTTGAATGTA
GGATCTATGTCTATGCTTGTTTGTGAAGGT-------------------------------TGGAGATGGGCTATTTCAT
CTTTGTTGGCTATCTCAGAAACTCTCACCACTTGACCGAATCTTCTACTGTAACGGCGACGCTACTGCACTTGCTCCACA
CACAAGCAGAAT-CCCTGTGGCATGTGCAACGAGACCTGTGAATTTGTCTGCATCCAGGCTATTCTGCTGAATCGCCACC
AGCCTCAGCCTCTTGTGCCGACCACGCCGATGAACTGAACGAAGACAAAGCAAAACAAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>chr4B_1
GGCGTCCAGATTCCGCTGGAATCTTCCAGGCGTGCCGCGCGCCCTCCCCGATTTTTATTAAGGGCCGTCGTGGTCCCGTC
CAGGCCATCGCCGTGGATTCGCCTTGCAGGCAGGCAGGTCTCCGCTCGCCG--CGCCGCCCGCCGCCCCG----------
CCGGTCGCCGCTCCCCCGAGGTAAACGGCGCCTGCTCTCCCTCCCTCTCTCTGGTTCCGCGTTAAATTTCGTCGCGATTT
AGGACTTACGAGCTT-------GGGCGGATTTGATTCGTTCGATGGGGTCT------------GCTGCCCGATTCATGG-
GGTATTCCGTCGGCGCCCCGGTGATCCGGGCGAGCCTTGAGTGGTAGGCTTCGGGGCGCTGATCTGCGCTCGGAATTGGA
TCCGTGGGTGGGCGCGGCTTGGTAATTTGGGGGAAATTGGGAATTTTCCTCCCGTTTGTTGAAGAAATAAATAGATTGAA
TTGTTTCAGTAATTCAATATTCCTGAGTAGTTTATTTAGAAATCTATCTTCTTCTAGAGCGTGAACTGTGAACTCAACTC
GATCTGGTGTATTCCTGCCTGATTTCTAGAGGGTCTGATGAATATTCTTCTGTGGATAATCGACAGA---TTTTTTTTTC
AGCGGGATGAAGGGGGTGTAGGTTATATTAGTGATCCTGTTGCTGTGGGTACTCGGATTATTTTGTAAGAAGATAATATG
CTCACCTGAGTAACAAAACCATCGTTTCTGCGAGTCCCTGATCATCAAGTGTATTGTTTAGCTGAATGTCCTGTGGATTT
GGCTAAATACTAAAATGTTTATGATGAGAATTTAGAACTATGTTACAGTAGTATTTGT----------------------
--------------------------------------------------------------------------------
------TATTA---TACAACGCAGCTGTATTTTAACACAGTTGTAGCCATGGGCAATCTTTTTAGGTGATCTTCTTGTTA
GATTAAG-------------------------------TTTTTTTTCA---TATTTATTTACATGGATGGTGGATTTTCA
CATGGCTG-AAAATGATGACCCTTTTGGTTTTGGGAGGCTTCATAGTACTGACTGAGGCTGGTGCAAAGAATAGGTTGCT
GTGTGTTGTGTAACTCTGTACTGTTTGTAATAACGT-GTAGTGTTGAGGAGTACATTCTATTCTTTTGCCATATAGCTCT
TTCTAGCAGTGTTGGTGATCGTTCTCACTTGAAATCGCAGGTTTCAACCGTTAAGAAGCTCAAGATGTCCGCCAATGTTG
GGGAATCAGCGGCAGTTGGTGGCAGCAGCAGCGATGCAGCTGGAGGGAGCTTTGAGTGCAACATATGCTTTGAGTTGCCA
CAGGAGCCAATAGTAACTCTCTGTGGCCACCTATTCTGCTGGCCGTGCCTCTACAGATGGCTGCACATGCACGCCAACAC
ACCAGAGTGCCCTGTGTGCAAGGCCATTGTTGAAGAAGACAAGCTTGTCCCCCTTTATGGCCGTGGCAAGGACCGCGTCG
ACCCAAGGTCAAAGAACACGCCTGGAGCCGACATTCCTCAGCGCCCAGCTGGACAGAGGCCCGCAACAGCCCAACAGGCT
GATCCTAACAACAATTTCGGCAACGCCCATGCAAATCCATGGTTCATGGGCATGGGGGGCGCGGGGGCGGGTGTCCCG--
----CTGGCGAATGGACGGTGGGGCAACTATGCGTTCTCGGCTGCGTTCGGGGGCCTGTTCCCTATGCTCAGCTTCCAAA
TGCATGGGTTTCCAGATCCAGCTGCATATGCCCAGCCTGCTGGGTTTCACTATGGGTTTGGTCACGGCCATGGATTCCAT
GGCGGGCATATGGGGCACGCCCACGGCGTCCCCCGCCAAGGGCCGCTCGGGCAGCAGCAGCAGCAGGCAGATGTCTACCT
GAAGGCCCTTCTTATCATGGTCGGGGTTCTTGTGATCGCAAGCCTCCTCGCAGCTTAAATTGGTTACTGCTATCATCAAA
ATTGTGGTGGTGTTTGGTAGGAGTTGCCAGAGCATACCTT-GGTGTAGGCTTATCTCTACCAAATTGGAGGCAAGTT---
-CTGTTCGTTCGAAGGTTTGTATGAAGTGTCCATGGAGTTTCTGTATCTAGATTTGGATGGTCTTCCTCTGCTGCATGAT
GCATCATCCTGTGTTTTGTAGTTTTGACTCCTTTGGTTTGATAAACCCTGCGTGGTGTACAATTGTTGGGAGGTCATCTC
CTCGTGTCTGTAACCTGTATCAATCTAGATTGGACAGTGTAGATGAGTACATTTACATGTAATAATTCTCATGCTTGCAC
AAAGTGACAGTTCGTGTACCTTTTGACAGCAAGTTCAAGGTGTTGCCATTCTTCGACAAATATCGTTAAATTTGAATGTA
GGATCTATATATGTGCTTGTTTGTTAAATTTGAATGTAGGATCTATATATGTGCTTGGTTGTGCAGATGGTCTATTTCAT
CTTTTGTTGGCTATATCGAAACTTTCACCACTTGCCTGAAT-------------GGCGACGGCACTGCACTGAAGCCACA
CAAACAGAATCC------------------------------------------CCAGGCTATTCTGCTGAATCACCACC
AGCCTC------TTGTGCCGACCACGCCGATGAACTGAACGAAGACAAAGCAAAACAAGCCTGCAACCCTGAACTGTCGT
G------TGGCACATGCTGCGTGATTACCCCATGTTCACAGATTGTACTATTTTCAGAACGGATCGTGTGGTTACAAAAA
TCATCGATATGCAAAA-AAGCCTAGCCTAGATGATTTGAATCCTAAACTTGACACGG-----------------------
---------TGCAAAATCTGCCGGCCCATTCTCTCGAAAATGCTCATAGTGGTGAAGTTTGCTTACTTATATTCATAGAG
ATGAGTGTGTGCGCGCGCTGTGAGCGTCTGCA--TTTGTACCGTGTTTAGAAAGAAAG-AAAAAGCATAGATCTACCTGA
CTAGTTTAGACA---CGGGTATATCATCTTCGAAAGTTACAGTCGGCGCCGTGTATGATTGTGTGCTGTTACCGCAACTT
CGAATTTCCAGTTATCTTGTAGAACTTATTTGATTCAAAGAAATTCCATAGAATTTTTGGAGGGTTAGAATCCATAACAT
TTTTTTTATGTTGGTCGTTTGATTCATGGATTGATTCTTATAGTTTTTTTCCCGATGGAATCAAGTGTACTACATTTTAT
TAGAAATCTAGCATTCATTTCAACCTCTATCTTTTTTTAAAAAAAAAGAGGATGACCCCCGACCTCTGCATCTGGGAGAT
GCATACGGCCACTTTATTAATTATTCTCGAGGACCTTACAAAGTATTACAAACAATAAACCTGAATCCACCATCTTGGCA
ACATATGTCGCTACTCCTATCCATATGATGAAGGGATGCTAGCTGGGCTTCTACCCAAACCACTCACCTAAACCTAACAT
CAAAAGCCAGAAGCCCCAGCCGAGCCACATACCGGGTCTGGGGCACAATCCGGTCAGACGCACTCTTGTGTCGTCGCAGC
CATCTTCCACAGGTCCATCTTCAGATTATATTGAGTTTTCTACCTTGTCTGGCCACTCTGCCATAGACGTCACCATGACG
CCAGACAGATACCTGCTCCTGCGCGAGTCCATCTCCGCGCATCGGACGCCGAGCCTCCACAGTGCCATGCCGCCGATCTC
CGCCGCCTTCAAAGAGTGAGATGAAGTACCGCTTCACCATGGCATGTACAAGGTGAGGAAGGGCGAGGTCCCCATCGGAG
ACACGGCCGGAAGAGGAGCACCGCATCCACGAGACAAATGCCCGGAGCTGCGACGCGGTAGATCAGACGGGCCGCCACCA
GGAACTAGACAAACTCGCCACGCACGCCCACCATCCCCATGCCCAAGTCGGCGCCTTCAAGAAGGTGACGCCGCTGTGGC
GCCGCCGCCGCTTAGCCACCGGGGCTAGGGTTTTCACCCGGGCGCAGGGGAAGGGGGGAGGCAGGGAAGGTGAGCCTCGG
CGCCGCCACCAAGGAGGGAATGGCGTCCGGGACGCCATCGACGCCGTGACCGCCACCGGCGGCCAAGGGTTTTCCCGGGC
CAAGCAGCCTGCCGCCACCTCCGAACCAGCCACAGCATCAGCAGGCGCGTGCACGCCGGAGATCCAGGTCGGCCGGAGGT
CATGCATCACGAGCAGACCAGAACGCCTCAGATCTGACGAGGGGAGCCCGGGGCCTCCCCGCGCCACGACCAGCGCCCAC
CGGGACCTCGCTGCCCGCGCAGCCGAGGGGACCCGGCCAACCTCACCGACGAGCACTCCCCGCCGCCGGAGGAGCGCCGT
CTGCACCAGCGAGTCCGCCGCCTCAGATCCGGGTCCTCGCCTCCGAAAAGGAGCGGCTAGAGGCCTCGCCGCCGCCCTCA
CAGGCAGCCGCGCGGGGGCCCCGGCGACCGCCTCCGGCAGCAACGAGGAGGAGGGGAAGGGGGAGGTGGCGGCGCGAGGG
AACCCTAGGTCACCCCCGAGTCGCCCTCTTCCTCTTTCAACCTCCGTTTACAATTTGTTTGTTTTTGCTGAGACATCAAA
CACTCTATGCTAATTCTATGGAATTCAAGCGGACATGCCAATCAAATCCTGTTTTTCCTTTCTATTCCTGAGTTTTGAAA
ATCCTACAAATGAAAGAGGGGCTTTGCTTCTATTTTGGGCACCACCGATACGTATCTATCCAAACTTTTTTCTTCATGGA
CGTAGCTGTCCGAACTTGGCTGTACATGGAACGCCGATTCGTATCTATCCAAACTTTTTTCTTCATGGACGTAACTGTAC
ATGGACCGCCGATGCAATGCTTTGGCTTGCTCACTTTTA------------------------------------
>SNPs
--------------------------S-----------------------------------------------------
-S------------------------------------------------------------------------------
-----------------S------------------------------S---------------------S---------
-------------S---------------------------------------------------------------SS-
--------------------------------------------------------------------------------
--------------------------------S-----S---S----------------------S--S-----------
------------------------------------S-------------------------------------------
----------------S----S----------------------------S--------------SS-------------
---S-------SS-S--SS-S-----------------S-------S----------------------S----------
--------------------------------------------------------------------------------
-----------S---------------------------------------------------SS--SSSSSSSSSSSSS
SSSSSSSSSS-------------------------------S----------------S--S------------------
-----------SSS------------------------------------------------------------------
-----------S-------SS------------------S----S-SSSSS-------SS--------------------
--------------------------------------------------------------------------------
------------------S---------S---------------------S--------S--------------------
-------------------------------------------------S------------------------------
-------------------------------------------------------------------------------S
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S------------------------------------S---------------
-----S-----------S-----------------------------------------------------------S--
---S-----------------------------------------------------------------S-----S----
----------S--------------------------------------------------------------S------
-----------------------------------------S--------------------------------------
------------------------S----------------------------------S-S------------------
----------------------------------------S----------------------S-S------S----SSS
S-------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
------------------------------------------------------------------S-------------
-------------------------------------------------------SS-----------------------
-----------------------------------------------------------------------S--------
-----------------------------------------------------------SS-------------------
------------S----------------------------------------S------------------------S-
---------------------------S-----------------------------------S-----S--SSSSSS-S
SSSSSSS--------S---S-----------------------S-S---------SSS-SS---S-SS--------S---
-----S-S----S--SS-------S-S------SSSSSSS--S-SSSS-S--SSSS-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS-----S---------SS------------SS---------SSS-SS-------S-SSS-S---------S-
---------S-----S-S-S----SS--SSS-SS-S-----S----------SS--SSS-----S---SS--S---S--S
---------S-SSSS-------------S------SS--S-----S----S----------SS---------S-------
-------S-SS-------S--SSSS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--S------------S----S---------
S----------------------------------------------------------S-------------S------
-----------------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCAGGCTGAACCGTGTAGAT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_1914
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GTTCCAT
GGCGGGCATATGG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>forward_1443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTTGCTTTGAGTTGCCG
CAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>reverse_3224
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGTATTTTGGGCACCACCGA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
