>input_sequence_56334
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-------------------------------------------------ATGAAGCAGCGCAGGTGGTGGGTGGCCTTGG
GCCCATGCTGGAGCATGTCTCCGGCGAGAAGCAGCAGCAGAGTATGCCCTGAC----------GGCA-------------
-------------GCGGCAACCCATGGCGGTGGGTGCATGCGGGCAGAAG--GGGTGCGGCATGGGAGG-----------
--------TGGATAAGA-CCTGCCAGGTGGGTCCT-CTTCAAGTTAACAGTCAATGCC-GTTTATATTTACCATATAGTG
CCACATGGGCCCGACCAGCGGACCCGATATGTCATAAATCAGATTAATTTGGCCCAGATCAGTCATCAACGTTTATTGCG
AAAATTAACAAGAAAAGAGGTAGTAGATTTTTGGGGCGCTCAAGAAATGTGATGACAATTCCGGACGAGAATTTCAAATG
TGATGATTTTTTACGGTTCACTCATTTGCGAAGGAGCAACGAGAAAAAGCATGTCTGACGTGGTGGATACGTCAGCGAGC
GCCTGTTTCGCCCTACTATATTTTTGAGCCGTTTCTTGGCGCAAGCCATCGGAACGCTCGACACGGCATGCGCTGCTCCT
GCGCCAACAATGGCACTGCATGGATCTGGACCAGTGGGAACGCATTTAAGCGCGCGCATCCGCACGAGTTTAATTGCCAG
ATTTGTCCACGGCGGCGCGTGGTGCTGCTGGGACGCAGACAGAGAGACAGCCCCTCGGCCGTCGTCTACCCCGTCGTCGT
GTACTGACTTTCTTTTTGCTCTCTCTGTTTCAAAATAAATGACCCAACTTTATACTAATTTTGTACTAAAGTTAGTATAA
AATTGAATCATCTACTCCCTTCATTTCATAATATAGTGCTTCCTCTATCCCGTGCTTTAATTTTGACCATAAATTTAATT
ATCAAGATCAATTGCGGCGGGAGCAAAAATATATCAGTGAATTCGTATTCGAAAGAAGTTTTTAATTATATAGTTTTTTC
TTCCGCCGCAGTTGGTCTTATTGATTAAATTTATAGTTAAAGTTGGACCTTAGAAAGCGCGGGCGCACTATATTTTAGAA
TTGATGGAGTATTTCGGAACGGAGCTACTTTGCGGTCTCGCGCGCGCGGTTCTCCGGCGGACTTCGTTTTCACAACCAAC
GTAGCTCGCCGCTCCGCTCCACACCACACGTGTATTGTCTTGTCTCGTCTTGGACTAACCGCGCGCAGATGGAGTTGCGG
TCGGTCGCCGTCGTCCATTTGTACAGCCACACGCTATACATGACGCTGGTTTCGACTGCTAGTTGCACGCTTGCTTCCTA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr4A_1_TraesCS4A01G412600
AGAACTGTTGTATGGCTACGTAGCGCACCACCATGTATAGAGGATCTTTTGCCTCTCGACTGCACCTCTATTATGATGGA
ATAAAACTTTTTTTCAGATCGCAAAAAAATAGTGTACCAATCTTGAAACAAGGGTCGTGTGGCCGCATGTATGTGTGGCC
CGTGTGTCCTGCAGATTTTCTTGCGTTTATAGTTTATCCGACCCATTTGCGAAGGAATGAATTGCAAAAAACCAGCACAT
TTGAAGTTCTCATCCAGAACTGTCACCACATTTCTTGAGCGCCCAAAAA-TCTATGTGTTTTTTTGTTAATTTTCTCGAT
AAACACAAATGACTGATTTGGGCCAAATTAATCCGATTTCTGACAGCTAGGGCCTGCATGTAACCGCTGACATGGCACAA
AACGGTCAACACCGTTTGTTGTCCGTCAAATTAGACATGGGGCCCACTAATTTGTGGCATTTCCACAAGCACCTTCTGTG
CAGGTACAGTGCACCATCAGAGCAGCACGCCATGACACCAGTAGCACGGCGACGAGGACCTGCTCCT-GTACCCGACGCT
CCAGCGGGCTTGACCACCACCTGAACCGTCCTATTGATGCTCGTTCGGCACCACCACATCT------GAGGGTGAAGGCG
TAGTTCCTGGTGACTATGAATGAGGAGGACGGCAGCGACGAGCTAACCGCCATGATCCCC-AATGACTACCCGGACCACC
GTTAGCGCCACCCCCTCTTCCTCCGCGCCGCACTGGGAGTCGGCCATCTACGTGGCGTCGGAGCTGCCGTCGTGCGCTTG
GGTCGTTCCAGTGGCTGGACGTGCCGGCGTCCGCGTATCTCTCGTCGCCCTGGATCCCGATGGTGGCGGCGGGAGTCGCG
TCCATGGACAGCGATGAGCATGACACGGGCGGCAGCGCGGAGCAGGCGCTCGGGTGGCAGTCGTGGCGCGACTGCGGAGC
AGCTCGGGTCGAGCTGCTCAAAGGGGCGGTGACGCCGTCTTGACAGCCCATGAAGCAGCGCAGGTGGTGGGTGGCCTTGG
GCCCATGCTGGAGCATGTCTCCGGCGAGAAGCAGCAGCAGAGTATGCCCTGAC----------GGCA-------------
-------------GCGGCAACCCATGGCGGTGGGTGCATGCGGGCAGAAG--GGGTGCGGCATGGGAGG-----------
--------TGGATAAGA-CCTGCCAGGTGGGTCCT-CTTCAAGTTAACAGTCAATGCC-GTTTATATTTACCATATAGTG
CCACATGGGCCCGACCAGCGGACCCGATATGTCATAAATCAGATTAATTTGGCCCAGATCAGTCATCAACGTTTATTGCG
AAAATTAACAAGAAAAGAGGTAGTAGATTTTTGGGGCGCTCAAGAAATGTGATGACAATTCCGGACGAGAATTTCAAATG
TGATGATTTTTTACGGTTCACTCATTTGCGAAGGAGCAACGAGAAAAAGCATGTCTGACGTGGTGGATACGTCAGCGAGC
GCCTGTTTCGCCCTACTATATTTTTGAGCCGTTTCTTGGCGCAAGCCATCGGAACGCTCGACACGGCATGCGCTGCTCCT
GCGCCAACAATGGCACTGCATGGATCTGGACCAGTGGGAACGCATTTAAGCGCGCGCATCCGCACGAGTTTAATTGCCAG
ATTTGTCCACGGCGGCGCGTGGTGCTGCTGGGACGCAGACAGAGAGACAGCCCCTCGGCCGTCGTCTACCCCGTCGTCGT
GTACTGACTTTCTTTTTGCTCTCTCTGTTTCAAAATAAATGACCCAACTTTATACTAATTTTGTACTAAAGTTAGTATAA
AATTGAATCATCTACTCCCTTCATTTCATAATATAGTGCTTCCTCTATCCCGTGCTTTAATTTTGACCATAAATTTAATT
ATCAAGATCAATTGCGGCGGGAGCAAAAATATATCAGTGAATTCGTATTCGAAAGAAGTTTTTAATTATATAGTTTTTTC
TTCCGCCGCAGTTGGTCTTATTGATTAAATTTATAGTTAAAGTTGGACCTTAGAAAGCGCGGGCGCACTATATTTTAGAA
TTGATGGAGTATTTCGGAACGGAGCTACTTTGCGGTCTCGCGCGCGCGGTTCTCCGGCGGACTTCGTTTTCACAACCAAC
GTAGCTCGCCGCTCCGCTCCACACCACACGTGTATTGTCTTGTCTCGTCTTGGACTAACCGCGCGCAGATGGAGTTGCGG
TCGGTCGCCGTCGTCCATTTGTACAGCCACACGCTATACATGACGCTGGTTTCGACTGCTAGTTGCACGCTTGCTTCCTA
AGCATCCCACGGTTCGTGTTTATCACAAAACTAGTTTATTTTGACCAAATCTTATA------------------------
-----------------------------TACTTAGTTACTTAGGGCATTTTTAAAGCGGACCCTCAGATCGTCCGCAAG
CATGTGTGATTAGTTGTTCGGACATAGTTTGTCATCCAACGACGCTCCGCACCGGTCCGCGGGATCCGAACACTTCCGGC
ATCGAAAGCAAACATGGGGCTTTGCGGGAGTCCGCACACCAGACACGCGGGACTCCGATACCTCTAGCCCCACCCAAAAC
CCCGCTTGGATCCAT-ATCTCCATCCTCCCCTCTTTCTCTACTTCAA-TTTTTCTCTCGTCGGCGGAGCCAATCAACCAC
CTTGCCCGCCCGCCAAGCCTTTCTGGGAACTCCGCACATCTGCGACCTCCACCGCTACACCTGGCCTCCACGCCGTTTGT
CATCCGCCGTCGGTCCACACCTCTCGT----------------------------------------GTTTGCTAGAATG
CACGTGCCAATATTTTTGTACCTTCTTTAAAGCAATGAACTCGGACATCGAGTACATCTATGAGCACTACGTTAAGTCGT
TCGACGAGGAGGACAACACTGATGAAACGACGATGATGCAGGCGTTCCTGTAGGCACTGAGCGTGCGGAAGAGCATGTTA
TCAATTTCAAGGGATCGATCAAGAGTCATCGAATGCTCAACCAGAACAGGGCATTGGGGCCATTTGACGCTGATGGAGAA
CTACTTTGCCCCAATGCCCTATTCGCCGACAATTCCGAAGCTTTCGGATGTGAAAAAAAGTCTTCGATGGCTTCTACCAC
GACGTCGAGTACTTTGATGACTACTTTATTTTGAAAAAGAATGTCATAGGAAACATTGAATTCAAGTTTGATGTATTCTC
TACTGTCCGAATTAATTGAGCAACCTTTATACAATATAAATTACTTAGAGCATCTCTAGCAGACCCCTTAAAATACACGA
AACTGTAATAGGCGGAAAAACGACCTGAATAGAACCCATAAACAACTCCGACCTGT
>chr4B_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------AAGGAGTGAATTGTAAAAAACCACCACAT
TTGAAGTTCTCATCTGGAATTGCCACCACATTTCTTGAGCGCCCCAAAAATCTACCCATTTTCTTGTTAATTTTCTCAAT
AAACACTGATGACCGATCTCGGCCAAATTAATCTGATTTCTGACAGCCGGGGCCCGCCTATAACTGCTCACGTGGCATAA
AACGGTCAACACCGTTTGTTGACTGTCAAATTAGACATGGGGCCTACCATTTTGTGGCATTTCCACAAGCACCTTGTGTG
TAGGTGCAGTGCGCTGCCGGAGCAGCAGGCCATGGCACCAAGAGCGCGGCGATGAGGACCTATTCACCGTACCCGACGCT
CCGATGGGCTTGACCACCACTTGCACCGCCCTACTGATCCTCGTTTAGCACCACCACGTCC------GAAGG------CG
CGGTCCATGGCAGCTTTGCATGATGAGGACAGCGGCGGCGAGCTGGCCGCCATGAT-CCC-AATGACGAGTTGGACCGCT
ATTAGCGCCACCACCTCTTCCTCCTCGCCGCTCTAGGAGTCGGCCATCTTTGTGGCGCCGGAGTTGTCGTCGTGCGCTTG
GGTCGTTCCAGTGGCCGTTCGCGGCGGCGTCCACGTACCCCTCGTTGCCCTGGATCTCGATGGTTGCGGCGGGAGTTGCA
TCCATGGACGGCGACTAGCACGACACGGGTGGCAGCGCGCATCGGGCGCTCGGGTGGCAGCCATGGCGCGGCCGCGGAGC
AGCTCGGGTCACGCTGCTCAAAGGGGCGACAACGCCGTCTCCGCAGCCCACAAAGCAGCGGAGGTGGTGGGTGGCCTCGG
GCCTATGCTGGAGCAAGTCGCCAGCGAGAAGCGGCAGCAGAGTATGCGCCGAC----------GGCATGCAGCGGC----
-------------------------GGCGGCAATTGCGTGCGGGCAGAAA--AGGTGCGGCATGGGAGGAGAGCAGGTGG
ACGAGGGGTGGATAAGACCCTGACAGGTGGGCCCTCCTTCAAGTTAACAGTTAATGCCATTTTGTGTTGACCATATAGTG
CCACTTGGACCTGACCAGCGGGCTCTAGTTGTCAGAAATCAGATTAATTTGGTCCAGACCAGTCATCAGTGTTTATTGAG
AAAATTAACAAGAAAAGAGGTGG---ATTTTTGGGACGCTCAAGAAATATGGTGGTAATTCTGGATGAGAACTTCAAATG
TGGTGGTTTTTTGCAATTCACTC---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr6B_214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGAGTGAATTGCAAAAAACCACCACAT
TTGAAGTTCTTATCTGGAATTGCCACCACATTTCTTGAGCACCCCAAAAATCTACCAC-TTTTTTGTTAATTTTCTCAAT
AAACACTGATGACCGATTTAGGCCAAATTAATACGATTTCTGACAGCTAGGGCCCGCATGTAACCGCTGACATGGCACAA
AACGGTCAACACCGTTTGTTGACCGTCAAATTAGACATGGGGACCACTAGTTTGTGGCATTTCCACAAGCACCTTGTGTG
CAGGTGCATTGCACCGTCAGAGCAGCAGGCCATGGCACCAGGAGCACGTCGACGAGGACCTACTCACCGTACCCGGCGCT
CCAGCGGACTTGACCACCACCTGCACCGCCCTATTGATCCTCGTTCGGCACCACCACATAT------GAGGGTGAAGGCG
TAGTTCCTGGTGACTATGCACGAGGAGGACGGCGACGGCGAGCTCGCCACCATGAT-CCCTAATGACGAGTCGGACCGTC
GTTAACGCCACCACCTTTTCCTCCTCGCCGCACCGAGAGTCGGCAATCTTCGTGGCGTCGGAGCTGTCGTCGTGCGCCTG
GGTCGTTCCAGTGGCTGGACGCAGCGGCGTCCGCGTATCTCTCGTCGCCCTGGTTCTAGATGGTGGTGGCGGGAGTCGCG
TCCATGGACGACCATGAGCATGACACGGGCGGCAGCGTGGAGCAGGCGCTCGGGTGGTAGCCATGGCGCGGCTGCGGAGC
AGCTCGGGTCGAGCTGCTCAAAGGGGCGGTGGTGCCGTCTCAACAGCCCACGAAGCAGCGTAGGTGGTCGGTGGCCTCAG
GCCCATGCTGGAGCATGTCTCCGGCGAGAAGCAGCAGCAGAGTATGCCCCGACAGCAAGGAGTGGCA-------------
-------------GTGGCAACCCATGGCGGCGGGTGCATGCTGGCAGGAG--GGGTGCGGCAGGGGAGGAGAGAAGGTGG
ACGAGGGGTGGATAGGG-CCCGACAGGTGGGCCCTCCTTCAAGTTAACAGTCAATGTC-GTCTATATTGACCATATAGTG
CCACATGGACCTGACTAGCGGGCCCGATATGTCAGAAATCAGATTAATTTGTCTCAGATCGGTCATCAGTGTTTATTGCG
AAAATTAACAAGAAAAGAGGTAG---ATTTTTGGGACGCTCAAGAAATGTGGTGGCAATTCCAGAGGAGAACTTCAAATG
TGGTGGTTTTTTGCAATTCACTC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr2D_214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GGAGTGAATTGCAAAAAACTACCACAT
TTGAAGTTCGCATCCGGAATTGCCATCACATTTCTTGTGCGCCCCAAAAATCTATCTCTTTTCTTGCAAAAAAATTCAAT
AAACGCCCATGATTGATCTGGGGCAAATTGGTCTGATTTCTGACAACTAGGGCCCGCCTTTAACCGATGACATGGCATAA
AAGAGTCAACACCATTTGTTGACCGTCAA--TAGACATGGGGCCCACCAGTATGTGACATTTCCTCAAGCACCTTGTGTG
TATGTGCAGTGCGCCGAAAGAGCAGCAGGCCATGGCACTAGGAGCGCGGCAATGATTACCTGATCATCGTACACGGTGCT
CCGGCGGGTTTGACTATCACCTGCACCGCCCTACTGATCCTCTTTCGGCGCCACAACATCCGAGGGTGAAGG------CG
CAATTCATGGAGGCTATGCGCGAGGAGGACGACAACTGCGTGCTCGCCGCCATGATCCCC-AATGACGAGCTGGACCGCC
GTTAGCACCACTGCCCCTTCCTTC---------------TCGGCCATCTCCGTGGCACCGGAGTTGTCGTCGTGCGCTTG
GGTCGTTCCAGTGGCTAGACGTGGCGGCAGCCGCGTATCCCTCGCCGCCCTGGAACCCGATGGCAGCGCCAGGAGTCGCA
TCGATAGAAGGTGACGAGCACGACACGGGCTGCAGCGGGGAGCAGGCGCTCGGGTTGCAGCCATGGCGCGG------AGC
AGCTCGGGCCGCACTTCTCAAAGGGGCGATTGCGCCTTCTCAACGGCTCAG-----------------------------
---------GGAGCAAGTCGCCAGCGAGAAGCAGCAGCAGAGTATGCGTCAGC----------GGCAAGCAGCGACGGCG
GCAAGCAGCGACGGCGGCAACCCATGGTGGCAGGTGCGTGCGGGCAGGAG--AGGTGCAG-AGGGGAGGAGAGAAGGTGG
ACAAGGGGTGGATAAAACCCTGACAGGTGGGCCCTCCTTCAAGTTAACAGTCAATGTC-TTTTATGTTGACCATGTAGTG
CCACGTGGACT----TAGCGGGCCCGATATGTCAAAAATCGGATTATTTTGCCCCAGATCA-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr2D_218
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGAATTGCAAAAAACCACCACAT
TTGAAGTTCTCATCTGGAATTGCCACCACATTTCTTGAGCGCCCCAAAACTCTACCCCTTTTCTTGTTAATTTTCTCAAT
AAACACTGATGACCGATCTGGGCCAAATTAATCCTATTTCTGACAGCCGGGGCCCGCCTATAACTGCTCACGTGGCATAA
AACGGTCAACACTGTTTGTTGACTGTCAAATTAGACATGGGGCCTACCATTTTGTGGCATTTCCACAAGCACCTTGTGTG
CAGGTGCAGTGCGCCGCCGGAGCAGCAGGCCATGGCACCAGGAGCGCAGCGATGAGGACCTGTCAACCGTACCCGACGCT
TCGATGGGCTTGACCACCACTTGCACCGTCCTACTGATCCTCGTTCAGCACCACCACGTCC------GAAGG------CG
CGGTCCATGGCGGCTTTGCATGATGAGGACAGCGGCGGCGAGCTGGCCGCCATGAT-CCC-AATGACGAGTTGGACCGCC
GTTAGCGCCACCACCTCTTCCTCCTCGCCGCTCTAGGAGTCGGCCATCTTTGTGGCGCCGGAGTTGTCGTCGTGCGCTTG
GGTCGTTCCAGTGGCCGTTCGCGGCGGCGTCCACGTACCCCTTGTCGCCCTGGATCCCGATGGCTGCAGCAGGAGTTGCA
TCCATGGACGACGACGAGCACGGCACGGGTGGCAGCGCGCATCGGGCGCTCGGGTGGCAGCCATGGCGCGGCCGCGGAGC
TGCTCGGGTCACGCTGCTCAAAGGGGCGACAACGCCGTCTCCGCAGCCCACAAAGCAGCGGAGGTGGTGGGTGGCCTCGG
GCCTGTGCTGGAGCAAGTCGCCAGCGAGAAGCAGCAGCAGAGTATGCGCCGACGGCATC----------CAGCGGC----
-------------------------GGCGACAATTGTGTGTGGGCAGAAA--AGGTGCGGCATGGGAGGAGAGCAGGTGG
ACGAGGGGTGGATAAGACCCTGACAGGTGGGCCCTCCTTCAAGTTAACAGTCAATGCCATTTTGTGTTGACCATATAGTG
CCACTTGGACCTGACTAGCGGGCTCTAGTTGTCAGAAATCAGATTAATTTGGTCCAGACCAGTCATCAGTGTTTATTGAG
AAAATTAACAAGAAAAGAGGTGG---ATTTTTGGGGCGCTCAAGAAATGTGGTGGCAATTCCGGATGAGAACTTCAAATG
TGGTGGGTTTTTGCAATTCACTC---------------------------------------------------------
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--------------------------------------------------------
>chr3B_467
AGCACC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CTTGTGTG
CAGGTCCAGTGCGCCACCGGAGCAGCAGGCTATGGCATCAAGAGCGCGGCGATGAGGACCTGCTCATCGTACCCGATGCT
CCGATGGGCTTGACCACCACCTGCACTGCGCTACTGATCCTCGTTCGGCACCACCGCGTCT------GTGGGTGAAGGCA
CGGTTCATGGCGGCTATG--CGAGGAGGACAGCAGTGGTGAGCTCACCGCCATGAT-CCC-AATGACGAGTTGGACCGCC
GTTAGCGCCACCAGCTCTTCCTCCTCACCGCTCCGGGAGCCGGCCATCTGTGTGGCGCCGAAGCTGTCGTCGTGCGCTTG
GGTCGTTCCAGTGGCTGTTCGCGGCGGTGTCCACGTATCCCTCGTCGCACTGGATCCGGATGGCGGCGGCGGGAGTCGCT
TCCATGGACGGCGACGAGCACGACGTGGGCGGAAGCACGCAGTGGGCGCTCGGGTGGCAGCCGTGGCGCGGCCGCGGAGC
GGCTCGGGTCGCGCTGCTCAAGGGGGCAGCAGCGCCGTCTCCGCTGCCCACAGAGAAGCGCAGGTGGTGGGTGGCCTCGG
GCGTGTGCTGGGGCGAGTCGTCGGTGAGAAGCAGCAGCAGAGTATGCGTCGGT----------GGCAAGCAAC-------
----------ACGGCGGCAACCCATGGCGGCGGGTGCATGCGGGCAGGAGAGAGGTGCAGCAGGGAAGGAGAGCAGGTGG
ACAAGGA-TGGATAAGACCGTGACAGGTGGGCCCTCCTTCTAGTTAATAATGAATACC-GTTTATGTTGACCATATAGTG
CCACATGGACCTGACCAGTGGGCCCCAGCTGTCAGAAATCAGATTAATTTGGCCTAGAACAATCATCAGTGTTAATTGAG
AAATTTAACAAGAAAAGAGGTGG---ATCTTTGGGGCGCTCAAGAAATGTGGTGGCAATTCTGGATGAGAACTTCAAATG
TGGTGGTTTTTTGCAATTCACT----------------------------------------------------------
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>chr4D_1388
--------------------------------------------------------------------------------
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----------------TTGACCCAATTGCGAAAGAGTAATCAGAAAACT--TGTCTGACGTGGTGGAGACGTCAGCGAGC
GCCCCTTTCGCCCTATTTTGAGCTGTTTC--TTCCTTGGTGCAAGCCATCGG-ACGCTCAACAGGGCATGCGCTGCTCCT
GCGCCAACAATGGCACTGCATGGATCTGGACCAGTGGGAAGGCATTTAAGCGCGCGCATCCGCACGAGTTTAATTGCCAG
ATTTGTCCACGACGGCGCGTGGTGCTGCTGGGACGCAGACAGAGAGACAGCCCGTCGGCCGTCGTCTATCGCGTCGTCGT
GTACTGACTTTTACTTCTACTTTCTGGGCGGGCCTGTTTGGT------TTGAGACTAACTTTGTCAAAGCTTGCCACATC
TAAGATTAGGC-----------------------------------------------AAATTTGACCAATTTAGGTGTG
TGTTTGGTTCAAGCCACATCTTAGGCAAGCCACACTATGGTCCTACATCACATACACACACAAAATATGGCAAGATTTTC
TTAGGCTTGCCAACTTATAGCTCTTATTTTGAAGACCTAACCTTAGGTAAGTTTGGCAACATTGTATGGCAAAATGTGGC
ACTCTTGGGCCTAAAACCAAACAGCCC----------------------------------CTTCGTTTTCACAACCAAC
GTAGCTCGCCTCTCTGCTCCACACCACACGTGTATTGTCTTGTCTTGGACTA----AACCGCGCGCAGATGGAGTTGCGG
TCGTTCGCCGTCGTCCATTTCTACCGCCACACGCTATACATGACGCTGGTTTTGATTGGTAGTTGCACGGTTGCTTCCTA
AGCATCCCACGGTTCGTGTCTATCACAAAATTAGTTTATTTTGATCAAATCTTATACCACAAAACTAGTTTATTTTGATC
AAATCCCACAATCCGTGTCTATCACGGAGTACTTAGTTACTTAGGGCATCTCCAAAGCGGACCATTAGACCGTTCGCAAG
CGTCTGGGACTAGTTGTTTGGACAAAGTTTGTCATCCAACGGCGCCCCGCATCGGTCCGCGGGATCCGGACACTTCCCGC
ACCGGAAGCAAACAGGGGGCTTTGCGGGAGTCCGCACACTAGGCACGTGGGACTCCGATACCTCTGGCCCCACCTAAAAC
CCCACTTGGATCCCGCATCTCCATCCTCCCCTCTTTCTCTACATCTGCTTTTTCTCTCGTCGGTGCAGTCAATCCACCAC
CTTGCCCCCCCGCCAAGCCCTTCTCAGAACTCCACACATCTGTGACCTCCACCACTACACCTGGCCACCACGCCGTTTGT
CGTCCCCCTCTGGTCCACACCTCTCGTCCTTCTGACGCGCAGGTACGATCCACCACACCCGGCAAGTGTTTGCTGGAATG
CCCGCGCTAATATTTTTGTACCTTCTTTAAAGCAATGAACTCGGACATGGAGTACATCTATGAGCACTACGTTGAGTCGT
TCGACGAGGAGGACTACACTTATGAAATGACGATGATGCAGGCGTTCATGCAGGCACTAAGCGTGCGGAAGAGCATGTTA
TCAATTTCAAGGGATCGATGAAGGGTCATCGAATGCTTAATAGGAACAGGGCATTGGGGCCATTTGACGCTGATGGAGAA
CTACTTTGGCCCAATGCCCTATTCGCTGACAATTCCGGCGCTTTTGGATGTGAAAAAAAGTCTTTGATGGCTTCTACCAC
GACGTCGAGTACTTTGATGACTACTTT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>SNPs
--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------------S-----
---------------S---S--S---------------------S----------S-S-------------------S--
------SS----------------------------------------------S-------------------------
---------------------S---------------------------S-------------------------S----
-----S---------------------S------S------S-----------------------S--------------
-----------------------S--------------S-----------------------------------------
------------------S------------------S------S----------------------S-S-------S--
------------S-----------S------------------------S----------------S-------------
-----------------------S--------------------------------------------------------
---------S--------------------------------------------------S---------S---------
----------------------------------------SS--------S--------------------------S--
-------------------------------------------------S------------------------------
------------------------------S-------------------------------------------------
----------------------S--------S------------------------------------S-----------
--------S--S---------S------------S---------------------------------SS----------
-----------------------SSS-------------------------S--S----------S-----S--------
--S--S------S-SS--------S-------S---S--SS------SSSS----------------S------------
---SS----------S-S-SSSS-SSSS-SS--S-----S------------S------S---S----------------
----------------------------------------S---------------------------------------
-----------S-----------------------------------------S--------------S-S---------
-----------SSS--SSSSS-SSSS-SSSSSSSSSSSSS-SSSSSSS--S-S-----S-----SSS-SSS-SSSSSSSS
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--------SSSSSSSSS-S
SSSSS-S-SS-SSS-SSSSSSSSSSS--SSSSSS-SS--SSSSSSS--SSS-S-S-SSSSSSS---SSSSS-SSS-----
--SS--SSSSSSSSS-S-SSS-SS-SSSS-SS-S-SS---SS--S-SSSSSSSSSSSSS-SSSSSSSSSSS-SS-SS-SS
SSSS-S-S-SS-SSSSSS-SSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
----------S---S------------------------------S-SSS-SSSSS------------------------
---S----------------S---S---------------------------S--S--S----------S----------
-------------------S----------S-------------S-----------------------------------
-------------------------------------------------S-SS----------S-S---S---S------
-S-S--S--S--------S-----S----------------S---S-----S----------------S--------S--
-S--S---------S------------------------S--S----S-----------------S--------S-----
---S---------SS---------------------------S--SS----------------S-S--S-----S-----
-------S-----------S----SS-------S--------S----------S------------S-------------
-S---S--SSS---------------------------------------------------------------S-----
-S--S--S----------------------------------------S------------------------S------
--------------S-----S------S-------------------S--S-------S---------------------
-------------------S---S-------------S--SSS-------------------------------------
--------S-----------------S----------SS-----S-------------------S---------------
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------CGCCATGATCCCCAATGACT------------
--------------------------------------------------------------------------------
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>reverse_1995
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TTTTTC
TTCCGCCGCAGTTG------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_1641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGATCTGGACCAGTGGGAAC---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_3370
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------AGGCGGAAAAACGACCTGAA---------------------------
