>input_sequence_56315
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-----------------------------------------------------------------------ATATATATA
TAACGCATCTAATCTCAGCCCACAACTCTACGTACGTGCGCACGGAAGAGAATCGGAGGAAGCTGCGACGTCCGCGATCG
ATGGGCGACATCGGGAGCCGGCGGTCGGACTACTTTATACTAGCGGCGCTCGCGCTCGTGCCGATCGCCGCAATGGCTCT
GCTCGTGTGCCTCGCCCTACTAGGCGACAGAGGGCCGCTCTACTCCGCCGCCATCGACGCCGCCACCGGCCTCGACGCCG
CCGACCTCGGCCGCCACGATCTGAGCCCGCTCTTCAACCTCACCCTCCGCGTCGCCTCGCGGAGCCTCTTCAGCGGCGAC
TGCACCGCGCCCGGCGCCGTCGTGGAGGTGAGCTACGCCGGCGTCCCGCTCGCCGCGGGGCCCGTCCCGCGGTTCTGCAC
CAAGCCAAGGGAGGCCAGGGAGCTGCGGGCCGTCGTGGCGTGGGGGGAGGCCGTGAAGGTCCCTGGGTTCGTGCTCGACG
GCCTCGCGGCGGACGCGCGGCGAGGGACGCCGGTGTTCGACGTGGCGGTCACCATGCCGGGGACCCACTGGAGCGGACAC
CATGGAACGATGGTGTCGTGCAGCGCCCTGCGCGTCGGGGACACGGCCTCGTTGGGAGCTACGTGCGCCGCTTCGGACGT
CGACACCGTCGTGACGCTGCCCAGGCCCAGCGGCAAGCTCGACGGCGGCGCCACCTGAGCTGACCTGTGCTTGCTGGCCT
GGGTCGTGGCGGTTGGTTGTTTGATCGATCTAGCTAGGGTTTTGTCGTCAGTGATAGATTCCGTTTTACTGCCCGCAAGA
TAAGTACAGTTTTACCCTTCATAACCAAAGGGATTTATTTTGTATTCATATAGTACGTAGCTACTAAGCTTGCTTGTGTA
ACGCACGATAACTTAGTACAAAATTGTTTTCGCATTCATTTAGTTAAGTTTATGATGTTTCCTGCCCTCACGCACGACAA
GCAGGACACTATTTCTTGGGAATTCACAACCAGTGGGGAACACTCCGCGTCGTCGGCGTACTTGGCCCAATTTACGGGTC
TTACCTTTAGTCTCAATGCTGCCACGATTTGAAAGATGTGAACCCCTACGAAGTCTAATTTTTTTGACTGGTTAATTCTT
CAGAACCACGTTTGGACGGCTGATCGCCTATCGATGCGTTTGGTTAGAAGGACATGCTAGGATGGATATGGCCATCCCTA
TCCAGGTGGATAGGGATAGCCAATTTAAAAA-----------------------ATACACACACAAA-------------
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>chr4B_1_TraesCS4B01G390600
ATATGCCCTTTTCAACGTTTTTCTAGGATCCTGATAAGTATCACACACATGACACGAAGTAACTTGGACCAAACGCCCCC
ATCACCATAGAACGCGTCACGCCACCGCATGATTGCACAAATAACGAAATTGAGGATATCAACGGGAAATTTTTGG-GTT
TTC-AG-TTTTAAAATGTTTTATCTCTTAAATTTAAAATCCAATTAAAAA--------------CACCAGTAAATCTATC
GCGGCGAGATCTTCGAAATTAGATTCCATATTGATATGTCTCGACGACTTT--CTT--TTAA-ATTAAAAGTTGCCATGT
CTAT-GAACATAAACTGCCATGGCATTTATGCTGAAGTTGCGATGATATGTTTCAACTACTTTTTCC-TTCTACGTTTAA
AGTAAATTTTGACATGTTATATAAA-G--GG-AATTAAGAAACTAAACTTGCCATAGTGAATTACTAAAATTTGCCATGA
TCCATGAAATAATGTTGACATGGTTCATAATTAAA-AACAAATCTGTCGTCAATTACTTTAGAAA-TGCATGGTTAGTGA
CTCAAATCTGGCATGGGCCATAAACT-AAAATTGCCAGATTCTATAAATTAAATTTTCCATGATATAAAAATTGCCATGA
TTCATGAAATAAATTTGGCATGATTAATTAATAAAAATTGCCATGGTCAATGAATAAAATTTGGCGTGAAAATTAGTTGA
AATACAATGATAGGTTAAATTCTAGAGAAAAAAAAGATAAAACATATCATAGCAACTTTAGTGTAAACCCTGTGGCAATT
TCAGTGTAAAAACCATCACAAGTTTTTGACAAAAAAAGTCGTCAAAACATTCAATAAGGGATCTAGTTTTGAAAATCCCA
TCGAGACGGATTTAATGGTAAAAATGAATTTTTAATTAGATTTTTTATTTAAGAGATAAAATATTTTAAAGTTTGAAAAC
CCAAAAAGTTTCCGCTGACGTCGTATGGTTGGTTGCGTTTGACCTGACCCAAATTGCTTCGTACAACTGTTATATATATA
TAACGCATCTAATCTCAGCCCACAACTCTACGTACGTGCGCACGGAAGAGAATCGGAGGAAGCTGCGACGTCCGCGATCG
ATGGGCGACATCGGGAGCCGGCGGTCGGACTACTTTATACTAGCGGCGCTCGCGCTCGTGCCGATCGCCGCAATGGCTCT
GCTCGTGTGCCTCGCCCTACTAGGCGACAGAGGGCCGCTCTACTCCGCCGCCATCGACGCCGCCACCGGCCTCGACGCCG
CCGACCTCGGCCGCCACGATCTGAGCCCGCTCTTCAACCTCACCCTCCGCGTCGCCTCGCGGAGCCTCTTCAGCGGCGAC
TGCACCGCGCCCGGCGCCGTCGTGGAGGTGAGCTACGCCGGCGTCCCGCTCGCCGCGGGGCCCGTCCCGCGGTTCTGCAC
CAAGCCAAGGGAGGCCAGGGAGCTGCGGGCCGTCGTGGCGTGGGGGGAGGCCGTGAAGGTCCCTGGGTTCGTGCTCGACG
GCCTCGCGGCGGACGCGCGGCGAGGGACGCCGGTGTTCGACGTGGCGGTCACCATGCCGGGGACCCACTGGAGCGGACAC
CATGGAACGATGGTGTCGTGCAGCGCCCTGCGCGTCGGGGACACGGCCTCGTTGGGAGCTACGTGCGCCGCTTCGGACGT
CGACACCGTCGTGACGCTGCCCAGGCCCAGCGGCAAGCTCGACGGCGGCGCCACCTGAGCTGACCTGTGCTTGCTGGCCT
GGGTCGTGGCGGTTGGTTGTTTGATCGATCTAGCTAGGGTTTTGTCGTCAGTGATAGATTCCGTTTTACTGCCCGCAAGA
TAAGTACAGTTTTACCCTTCATAACCAAAGGGATTTATTTTGTATTCATATAGTACGTAGCTACTAAGCTTGCTTGTGTA
ACGCACGATAACTTAGTACAAAATTGTTTTCGCATTCATTTAGTTAAGTTTATGATGTTTCCTGCCCTCACGCACGACAA
GCAGGACACTATTTCTTGGGAATTCACAACCAGTGGGGAACACTCCGCGTCGTCGGCGTACTTGGCCCAATTTACGGGTC
TTACCTTTAGTCTCAATGCTGCCACGATTTGAAAGATGTGAACCCCTACGAAGTCTAATTTTTTTGACTGGTTAATTCTT
CAGAACCACGTTTGGACGGCTGATCGCCTATCGATGCGTTTGGTTAGAAGGACATGCTAGGATGGATATGGCCATCCCTA
TCCAGGTGGATAGGGATAGCCAATTTAAAAA-----------------------ATACACACACAAATTAAACCCATTAC
AGGTCGCGCAAGGAGCGAGCTCTCGCGCTAGCCACGTCGGCATTCGAGCGAACGGGTTGGGCAGGAGCGTCTCGTTTTGA
TTGGAGAAAATAATG----TTTGTGTATCGTGGCAAGATAACCA------------------------------------
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------------------------------GGAGATTTGCCTTCCTCACGAAGGAAAACCTCACCCCTTCCCTTCCCTCG
CCACAGCCATTCCCTCCTCTTCTCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTGACTGGCTCGGGCCCGACGCCTCCGCTCGCCGCTGCGCCTACGGATCCGAGCTCGCGTGCAGT
GGCCGTGGTAGGAAGGTGCGGCGCTGCTCGTTCCCACGGCCGCGACGGCAAGAGCTAGAAGGCGGGTGGTGCCGCGAGCT
CTTGTCCCTAGGATGCAGCCCGTCCTCTCTTTGAGCTCGCCGCCGCCATCGCCGGGAGGATCACCACGTCGTCTTCCTCG
CATCCGCCGGGTTGTTCATGGGAATTCGCAGGCGCCGATCCCGTGCATCGTTTCTTCCTCTCCTCGAGGACTCGCGACGA
AGAAGCTGGCGGAGAAGGAGCCCGACTGGAGGACAGTGAGATGTAGGGAGCCTCGCCACCATCGTCCTCCTGGAGTCAGG
GCTGGGCAGGGATGGCGGATTCATTCTATTTCTGAGTGGTGAAGTCATCTTATCCTCCGGATCCCCTGCAGGGCAT----
----CAAGTTCCTAGGAGATGGAGGGCTCGAGGAGCCGCACGCACAGCCGATGATTGGAATGCTGGTGCCAAAGATCCTC
CCCATACATAGGTACTGGCTTCTTC
>chr3D_17
GTTTTCCG---------------TTGGACCCCGATAAGTACCACACTCGTAGCACGAAGCAACTTGGGCCAAACGCCCCC
ATCACCACTGATCACGCCACGTCACTGCATGCGTGCACAAATGACAAAACTGATGATGTCAACAGAAATCTTTTGG-GTT
TTC-AGTTTTTAAAATGTCTTATCT--TAAATTAAAAATCTGATT-AAAACCCGTT------TTCACCATTAAATCTGTC
GCGACGAGATCTACGAAACTAGATCCCATATTGATATGTTTCGATGACTTT--TTT-------GTTAAAAGTTATTATGT
CTATTGCACATAAATTGTCATCGCATTTACACTGAAGTTACCATGATATATTTCAACTACTTT-TATTTTGTACA-TTTA
AATAAATTTTGACATGTTATAAAAA-AA-GGAAATTAAGAAACTAAACTTGCCATGGTGAATTACTAAAATTTGCCATGA
TCCATGAAATAATTTTGACATGGTTCATAATTAAAAA-CAAATATGTCATTAATTACTTTAAAAA-TGCATGATCACTAA
CTCAAATTAGGCATGAACCATAAACT-AAAAATGT---------------------------------------------
------------------CATGGTGAATTACTTAAATTTGTCATGATA--------------------------------
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>chr7D_18
TTTTT------------------TTGGACCCCGGTAAGTACCACACGTGTGGCACGAAGCAACTTGAACTAAACGCCCCC
ATCACCACAGATCGCGCCATGTCACCGCATGCATGCACAAATTACGTAACTGATGATGCTAGCGGGAATCTTTTGG-GTT
TTC-AG-TTTTAAAATGTTTTATCTCTTAAATTAAAAATCTGATTAAAAAACTGTT------TTCACCATTAAATCCGCC
GTGGCGACATATACAAAACTAGATCCCATATTAATATGTTTTGACGACTTT--TTAGATG--GGTTAAAAGTTGTCATGT
CTATTGTACC-----------------------GAAGTTGCCATGATATGTTTCAATTACTTTTCTC-TTCTACGTTTAA
AGTAAATTTTGACATGTTATAGAAA-AG-GG--ATTAAGAAACTAAACTTGCCATGATGAATTACTAAAATTTATCATGA
TCCATGAAATAATTTTGACATGGTTCATAATTAAA-AAGAAATCCATCGTCAATTACTTGAAAAA-TGCATGGTCAA-GA
CTCAAATTTGACATGAACCATAAATT-AAATTTC----------------------------------------------
------------------CATGGTGAATTATTTAAATTTGCCATGATACA------------------------------
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---------------------------------------------------------------------------TGCAC
AAA----------------------------------------------------ACC-TGCCATAGTTCATAC------
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--------------------------AAAAA-----------------------AAAATT--------------------
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-----------------------------------------------------------------GCCATGGTGAAAA-T
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-----------------------------------------------------AA------------------------A
AAATTGCCATGATGAATTACTAAAAATTG---------------------------------------------------
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-------------------------
>chr2D_24
-----------------------TAGGACCCCGATAAGTATGACACGTGTGGCACAAAGTAATTTGGGCCAAATGCCCTT
ATCATCACGCAACGCACCACGTCACCGCATGCATGCGCAAATGACGAAACTGATGATGCCAACGAGAATCTTTTGG-GTT
TTC-GGTTTTTAAAATGTTTTATTTCTGAAATTAAAAATCTGATTAAAAACC-GTT------TTCACGATTAAATCCGTC
GCGACGCGATCTTCGAAAGTAGATCACATATTGATATGTTTCGACGACTTT--TTT--AG--GGTTAAAATTTGCCATGT
CTATTGCACATAAATTATCATGGCGTTTACACTGAAGTTGCCATGATATGTTTCAACTTCTTT-TTA-TTCTACGTTTAA
AGTAAATTTTGACATGTCATAAAGA-AG-GG-AATTAAGAAACTAAACTTGCCATGGTGAATTACTAAAAATTGCCATGA
TCCACGAAATAATTTTAACATGGTTCATAATTAAA-ATGAAATCCATCATCAAATACTTTAAAAA-TGCATGGTCAATGA
CTCAAATTTGCCATCAACCAGAAACTAAAATTTC----------------------------------------------
------------------CATGGTGAGTTACTTAAATTTGCCATGATA--------------------------------
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>chr5B_61
------------------------------------------------------------AACTTGGGCCAAACGTCCTC
ATCATCACAGATCACGCCACGTCACCGCATGCATGCACAAATGATG-AACTGATGAAGTTAGCGGGAACCTTTTGG-GTT
TTC-AGTTTTTAAAATGTTTTATCTCCTAAAATGAAAATCCAATTAAAAAATAATT------TTCACCATTAAATCCGTC
GCGACGAGATCTACGAAACTAGATCCCATATTGATATGTTTCGACGATTTT--TGT--T---GGTTAAAAGTTCCCATGT
CTATTGCACTGAAGTTGCCATGACGTTTACGCTGAAGTTGTTATGATATGTTTGAACTACTTT-CTC-TTCTACCTTTAA
AGTAAATTTTGACATGTTATAAAAA-GA--G-AATTAAGAAACTAAACTTGTCATGGTGAATTACTAAAATTTGCCATGA
TCCATGATGTAATTTTTTCATGGTGCATAATTAAA-AAGAAATATGTCGTCAAGTACTTTAGAAA-TACATGGTCAATGA
CTCAAATTTGGCATGAACCATAAACTAAAATTGC----------------------------------------------
------------------CATGATGAATTACTTAAATTTGCCTTGATACA------------------------------
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---------------------------------------------------------------------------TGCAC
CAA----------------------------------------------------AATT-GCCATGGTTTATAA------
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--------------------------ATGAA-----------------------A-------------------------
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-------------------------
>chr7B_67
GACCACACG-------------------------------------------------------------------CCCC
ATGACAACAGATTGTGCCATGTCACCGCATGCGTGCACAAGTGACAAAACTGATGATGTTAGCAGGAATTCTTTGG-GTT
TTC-AGTTTTTAAAATGTTTTATCTCTTAAATTTAAAATCCGGTTGAAAAACCGTT------TTCACCATTAAATCCATC
ATGACGAGATCTTCGAAACTAGATCCCCTA-CGATATGTTTCGACG-CTTT--TCT-------GTTTAAAAATATCATGT
CTATTGCACATAAATTGCGATGGAGTTTACACTGAAGTTGCCATAATATGTTTCAACTACTTT-TTC-TTCTACG-TTAA
AGTAAATTTTGACATGTTATAAAAC-AG-GG-AATTAAGAAACTAAACTTGCCATGGTGAATTACTAAAATTTTCCATAA
TCCATGAAATGATTTTGACATGGTTTATAAATTAAA---AAATCCATCGTCAATTACTTTAAAAA-TGCATGGTCGATGA
CGCAAGTTTGCCATGAACCATAAACTAAAATTAC----------------------------------------------
------------------CATGGTGAATTACTTAAATTTGCCATGATACAA-----------------------------
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>chr4D_67
GACCACACA-------------------------------------------------------------------CCCC
ATGACCACAGATTGCGCCACATCACCGCATGCATGCACAAGTGACGAAATTGATGATGTGAGCAGGAATCTTTCATTTTT
TTC-AGTTTTTAAAATGATTAATCTCTTAAATGAAAAATCCTACTGAAAAATCGTT------TTCACCATTAAATCTGTC
GCGACGAGATCTTCTAG-----------TATCGATATGTTTCGACG-ATTT--TTT--TG--GGTTAAAAGTTGTCATGT
CTATTGCACATAAATTGCCATGGTGTTTACACTGAAGTTGCCATGATATGTTTCAACTACCTT-TTC-TTCTACGTTTAA
AGTAAATTTTGACATGTTATAAAACGGA--G-AATTAAGAAACAAAACTTGCCATGGTGAATTACTAAAATTTGCCATCA
TTCATGAAATAATATTGACATGGTTCATAAATAAAAAAGAAATCCATTGTCAATTACTTTAAAAA-TGCATGATCAATGA
CTCAAATTTGCCATGAACCATAAACTAAAGTTGC----------------------------------------------
------------------CATGATGGATTGCTTAAATTTGCCATGATACA------------------------------
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---------------------------------------------------------------------------TGCAC
TAA----------------------------------------------------ATTTTGCCATGGTTCATAC------
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--------------------------AAAAA-----------------------ATAATT--------------------
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-----------------------------------------------------------------TCCATGGTCAAAAAT
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-----------------------------------------------------ACTAAAATTGCCATGATCTATAAACTA
AATTTGCCATGATGAATTA-------------------------------------------------------------
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-------------------------
>chr4D_107
GCATGATGCAT---------------------------------------------------------------------
------------------------------------ATAAGTGACAAAATTGCTGATAACAGCGAAAATCTTTTGG-GTT
TTC-AGTTTTTGAAATGTTTTATCTCTTAAATGAAAAATTCGATTGAAAAAACGTT------TTCACCTTT---------
------AGATCTTCCAAATTAAATCTCATATCGATATGTTTCGATGACTTT--TTT--TG--GGTTAAAAGTTGCTATGT
CTATTGAACATAAATTGTCATGGTATTTACACTGAATTTGCCATGATATGTTTCAACTACTTT-TTG-TTGTACGTTTAA
AGTAAAATTTGACATGTTACAAAAA-A--GG-AATTAAAAAACTAAACTTGCCATGGTGAATTACTAAAATTTGCCATGA
TCCATGAAATAACTTTGAAATTGTTCACAATTAAAAAAGAAATCCATCATCAATTACTTTACAAA-TGCATGGTCAATGA
CTCAAATCTGCCATAAACCATACACTAAAATTGC----------------------------------------------
------------------CATGGTGAATTAATTAAATTTACCATGATACA------------------------------
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---------------------------------------------------------------------------TGCAC
TAA----------------------------------------------------AATTTGCCATGGTTCATAC------
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--------------------------AAAAA-----------------------ATAATT--------------------
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-----------------------------------------------------------------TCCATGATCAAAA-T
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-----------------------------------------------------GCTAAAATTGCCATG------------
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-------------------------
>chr4A_127
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----------------------------------------------AAACTGATGATATCAGCAGGAATCTTTTGG-GTT
TTC-AAACTTTAAAATGTTTCATCTCTTAAATGACAAATCCGATTGAAAAACTGTTTTGACCTTGACCATTAAATCCGTC
GCGACGAGAACTTCAAAACTAGATCCCATATCGATATGTTTCGACGATATT--TTT--TGGCGGTCAAAAGTTGCCATGT
CTATTGCACATAAATTGCCATGGTGTTTACACTGAAGTTGCCATGATATGTTTCAACTACTTT-CTC-TTCTATGTTTAA
AGTAAATTTTGACATGTTATAAAAA-A--GA-AATTAAGAAACTAAACTTGCCATGGTGAGTTACTAAAATTTGCCATGA
TCCATGAAATAATTTTGACATGCTTCATAATTAAAAA-GAAATCCTTTGTCAATTAA-TTAAAAA-TGCATGGTCAATTA
CTCAAATTTGCCATGAACCAGAAACT-AAATTGC----------------------------------------------
------------------CATGGTGAATTACTTAAATTTGCCATGATACA------------------------------
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---------------------------------------------------------------------------TGCAC
AAA----------------------------------------------------AAGTTGCCATGGTTCATAC------
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--------------------------GAAAA-----------------------ATAATT--------------------
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-----------------------------------------------------------------TCCATGGTCAAAA-T
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-----------------------------------------------------ACTAGAGTTGCCATGATCTATAAACTA
AAATT---------------------------------------------------------------------------
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-------------------------
>chr6A_127
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----------------------------------------------AAATAGATGATGTCAACGGGAATCTTTTAG-GTT
TTTTAAACTTTAAAATGCTTTATCTCTTAAATGAAAAATCTGATTGAAAATCCGTT------TTCATCATTAAATCTGTC
GCGACAAGGACTTCAAAACTAGATCCCATGTCGATATATTTCGATGATA-T--TTT--TGGCGATCAAAAGTTGCCATGT
CTATTGCACATAAATTGCCATGGTGTTTATACTGAAGTTGCCATGATATATTTTTACTATTTT-TTC-TTCAACGTTTAA
AGTAAATTT-GACATGTTATAAAAA-AGAGG--ATTAAGAAACTATACTTGCCAAGGAGAATTACTAAAATTTGCCATGA
TCCATGCAATAATTTTGACATGGTTCACAATTAAAAA-GAAATCCGTCGTCAATTAT-TTTAAAAATGCATATTCAATGA
CTCAAATCTGCCATGAACCAGAAACTAAAATTGC----------------------------------------------
------------------CATGATGAATTACCTAAATTTGCCATGATACA------------------------------
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---------------------------------------------------------------------------TGCAC
TAA----------------------------------------------------ATTTTGCCATGGTTCATAA------
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--------------------------AAAAATAATTTT------------------------------------------
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-------------------------------------------------------------------CATGATCAAAA-T
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-----------------------------------------------------ACTAGAATTGCCATGGTCAA-------
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-------------------------
>chr3A_150
TTTTTGT-------------------------------------------------------------------------
---------------------------------------------------------------------------G-TTT
TTC-AAACTTTAAAGTGTTTTATCTCTTAAATGAAAAATCGGATTGAAAATCCATT------TTCACCATTAAATCCACC
GCGACGAGTACTTCAAAACTAGATCCGATATCGGTAGGTTTCGATGATATC--TTT--TGGCGGTCAAAAGTTGGCATAT
CTATTGCACATAATTTGCCATGGTGTTTACACTAAAGTTGTCATGATATGTTTCAACTACTTT-TTC-TTCCACGTTTAA
AGTAAATTTTGACATGTTATAAA----G-GG-AATTAAGAAACTAAACTTGCCATAATGAATTACTAAAATTTGCAGTGA
TCCATGAAATAATTTTGACATGGTTCATAATTAAAAA-GAAATCCGTCGTCAATTAT-TTAACAAATGAATGGTCAATGA
CTCAAATTTACCATGAATCAGAAACTACAATTGC----------------------------------------------
------------------CATGGTGAATTACTTAAATTTGCCATAATACA------------------------------
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---------------------------------------------------------------------------TGCAC
TAA----------------------------------------------------ACATTGCCATGGTTCATAC------
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--------------------------AAAAT-----------------------ATAATT--------------------
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-----------------------------------------------------------------TTCATGGTT-AAA-T
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-----------------------------------------------------ACTATAATTGCCATGGTCAA-------
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-------------------------
>chr7D_151
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTTTGG-GTT
TTC-AGTTTTTAAAATGTATCATCTCTTAAGTGAAAAATCCGATTGAAAAAA-GTT------TTCACCA-TAAATCCGTC
GCGGCGAGATCTTCGAAACTAGATCTCATATCGATATGTTACGACGGTTTTTATTT--TG--GGTTAAAAGTTGCCATGT
CTATTGCACATAAATTTTTATGGCGTTTACACTAAAGATGTCATGATATGTATCAACTACTTT-TTC-TTCTACATTTAA
AGTAAATTTTGACATGTTATAAAAA-G--GA-AATTAAGAAACTACACTTGCCATGGTGAATTACTAAAATTTGCCATGA
TCCATGAAATAATTTTGACATGATTCATAATTAAAAA-GAAATCCGTCGTCAACCAC-TTTAAAATTGCATGGTCAATGA
CTCAAATACGCCATGAACCACAAACTAAAATTAC----------------------------------------------
------------------CAAGGTGAATTACTAAAAATTGTC--GATAGA------------------------------
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---------------------------------------------------------------------------TGCAC
TAA----------------------------------------------------AATTTGCCATGGTTCATAC------
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--------------------------AAAAATAATTGCGATGGTCAAAAAAACAAGAATT--------------------
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-----------------------------------------------------------------GACATGGTCCAAA-T
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-----------------------------------------------------ACTAAATTTGCCATGAAA---------
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>chr5A_1203
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---------------------------------GCCGCTCTACTCCGCCGCCATCGACGCCGCCACCGGCCTCGACG---
------------GCCACGATCTGAACCCTCTCTTCAACCTCACCCTCCGCGTCGCCTCGCGGAGCATCTTCATCGGCGAC
TGCACCGCGCCCGGCACGGTCGTGGAGGTGAGCTACGCCGGCGTCCCGCTCGCCGCTGGGCCCGTCCAGAGGTTCTGCAC
CAAGCGAAGGGGGACCAGGGAGCTGCAGGCCATCGTGGCGTGGGGGACGGCGGTGCAGATCCCCGGGTTTGCCCTCGACG
GCCTCGCGGCGGACGCCCGGCGAGGGACGCCGGTGTTCGATGTGGCGGTCACCATGCCGGGAACCCACTGGAGCAACCAC
CATGGGACGATGGTGTCGTGCAGGGGCCTGCGCGTCGGGGACACGGCCTCGTTGGGAGCTACGTGCGCCGCTTCGGACGT
GGACACTATCGTGACGCTGCCCAGACCCAGCGCCAAGGTCGACGGTGCCAAT--------TGACCTGTACTTTG----CT
GCGTCGTGGCAGTCGGTTGTTTGATCGATCTAGCTAGGTTTTTCTCGTCAGGGATAGATTCAGTTTTACTGCCCGCAAG-
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--------------------------------------------------AGAACTAGAGGTT-----------------
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>chr7B_2250
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---------------------------------------------------------------CATATTAAACCCATTAC
GGGTCGCGCAAGGAGCGAGCTCCCGCGCTAGCCACGTCGGCATTCGAGCGAACGGGTTGGGCAGGAGCATCTCGTTTTGA
TTGGAGAAAACAATG----TTTGTGTGTCGTGCCAAGATAACCAGGAGATTTGCCTTCGCGAACCAACATGTGGTTGAAT
AGTTAGAGAGACTGTGGTATCCCCAGTCCACCAGGGTTCAAATCCTAGTGCTCGCATTTATTTCAGGATTTCCGGCGATG
CGCATTCAGTGGGAGGAGACGTTCCCGTCGACGACGAGGTGCCTACGGTGACTTCGTAAATTTTAAGATGATATGCCGGC
TCAGTCTTTCGGAGGTGCTCACAGGGATAGGGTGTGCGTGTGTGCGTTCATAGAGGTGAGTGTATGCGCGTGTATATGAG
CGCTTGTGTCTGTACTGATGTTAAAAAAAAGGAGATTTGCCTTCCTCACGAAGGAAAACCTCACCCCTTCCCTTCCCTCG
CCGCAGCCACTCCCTCCCCTTCTCCGCCGCCTCCCTCACCGCCCTGCCCCTCCCCTCATCTCTGCGCCATGGTGAAGCAA
CGCGGCGACTCTCCCCGATCTGCACCTCTC--------------------------------------------------
--------------------------------------------------------------------------------
----------------TAACTGGCTCGGGCCCGACGCCTCCGCTCGCCGCTGCGCCTACGGATCTGAGCTCGCGCGTAGT
GGCCGTGGTAGGAAGGTGCGGCGCTGCTCGTTCCCACGGCCGCGACGGCAAGAGCTAGAAGGCGGGTGGTGCCGCGAGCT
CTTGTCCCTAGGATGCAGCCCGTCCTCTCTTTGAGCTCGCCGCCGCCATCGCCGGGAGGATCGCCACGCCGTCTTCCTCG
CATCCATCGGGTTGTTCATGGGAATTCGCAGCCGTCGATCCCGTGCATCGTTTCTTCCTCTCCTCGAGGACTCGCGACGA
AGAAGCTGGCGGAGAAGGAGCCCGACTGGAGGACAGTGAGATGTAGGGAGCCTCGCCACCATCGTCCTCCTGGAGTCAGG
GCTGGGCAGGGATGGCGGATTCATTCTATTTCTGAGTGGCGAAGTCATCTTCTCCTCCGGATCCACTGCAGGGCAT----
----CAAGTTCCTAGGAGATGGAGGGCTCGAGGAGCCGCACGTACAGCCGATGATTGGAATGCTGGTGCCAAAGATCCTC
CCCATACATAGGTACTGGCTTCTTC
>chr6B_2310
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-------------------------------------------TCGAGCGAACGGGTTGGGCAGGAGCGTCTCGTTTTGA
TTGGAGAAAATAATCTTTATTTGTGTGTCGTGGCAAGATAAC--------------------------------------
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--------------------------------------------------------------------------------
------------------------------GGAGATTTGCCTTCCTCCCGAAGGAAAACCTCACCCCTTCTCTTCCCTCG
CCGCAGCCACTCCCTCCCCTTCTCCGCCGCCTCCCCTCCCC----GCCCCTCCCCTCATCTCTGCGCCATGGTGAAGCAA
CGCGGCGACTCTCCCCGATCTGCACCTCTC--------------------------------------------------
--------------------------------------------------------------------------------
----------------TGACTGGCTCGGGCCCGACGCCTCCGCTCGCCGCTGCGCCTACGGATCTGAGCTCGTGCGCAGT
GGCGGTGGTAGGAAGGTGCGGCGATGCTCGTTCCCACGGCCGCGACGGCAAGAGCTAGAAGGCGGGCGGCGCCGCGAGCT
CTTGTCCCTAGGATGCAGCCCGTCCTCTCTTTGAGCTCGCCGCCGCCATCGCCGGGAGGATCGTCACGCCGTCTTCCTCG
CATCCGCCGGGCTGTTCGTGGGAATTCGCAGCCGTCGATCCCGTGCACCGTTTCTTCCTCTCCTCGAGGACTCGCGACGA
AGAAGCTGGCGGAGAAGGAGCCCGACTGGAGGAGAGTGAGATGTAGGGAGCCTCGCCACCATCGTCCTCCTGGAGTCAGG
GCTGGGCAGGGATGGTGGATTCATTCTATTTCTGAGTGGTGAAGTCATCTTCTCCACCGGATCCGCTGCAGGGCGTCACC
TCTGCAAGTTCCTAGGAGATGGAGGGCTCGAGGAGCCGCACGCACAGCCGATGATTGGAATGCTGGTGCCAAAGATCCTC
CCCATACATAGGTACTGGCTTCTTC
>SNPs
S-------SS-SSSSSSSSSSSS-----S--S--------------S-S--S----------------------------
-------S--------S----S---------SS---------S----------S--------------S-----------
---------------------------------------------------------------------S----------
------------------------S--------------S-------------S-----SSS------------------
--------------S--------------------------S-----------------------S--------------
---------------------S----------------------------------------------------------
-------------S------------------------------------------------------------S-S---
---------------SS-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------S--------------------S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------SSS
SSSSSSSSSSSS------------S---S------------------------------------S------S-------
---------------S-S--------------------------------------S----------S-S----------
-----S-----S-S------------S----S--------------SS---S------S----S--------S-------
----------------S-----------------------S--------------------S------------SSS---
-----S-----------------S-S------------------------------------------------------
S-----SS----------------S-------S----S-------S-S-SSSSSSSSSSS--------S---SSSSSS--
-S--------S--S------------------------S----S-------S---------S-----------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------SSSSSS--S--------------
S---------------------S---------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S------S-------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS------------------------------------------------S---------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----S-----------
-------------------------------S--S---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S------------S---------------
--------------------------------------------------------------------------------
-------------------------
>forward_97
-----------------------------------------------------------------------------CCC
ATCACCATAGAACGCGT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_1309
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GCTCTTCAACCTCACCCTCC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1077
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GCCCACAACTCTACGTACGT-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_2089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGTCTCAATGCTGCCACGAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_2079
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ACTTGGCCCAATTTACGGGT-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3505
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CCTGCAGGGCATCAAG
TTCC----------------------------------------------------------------------------
-------------------------
