>input_sequence_56267
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GCCTGATCAGAGCA---------TCAAGCTCGACCTACG-CAGCTACCACAGA------GCACCTGCTGCCGGGCGTCAC
CGCAAGCTACTCGAGCCTTCTCCGGGGCCTTCTCCCGCGCCTTCTCCCGAG------------CCTTCTC----------
-----------------AGAGCG---AAAACGACGT------CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACG
GCCAACAGGACGACACGCCGGCGTTCCGGGAAGCATGGGCCGCCGCTTGCGCCTCGCCTCAGCCGGCCACCCTCGTGGTC
CCCAGGGAGAAGACGTACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAGGTCCCCCGTCACCTTCAGGCTGGACGG
CACGCTGGTGGCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACGTCGATGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAG
CTCGTGCCGTGTGGACAAGAAGCTCAAGTGCGGCAACGCCCCCATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGG
TGGAGAACATCCAGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCGGGACGTGCTCCTCAAGGGCATC
ACCATCACCGCCCCCGGCGACAGCCCCATGAACGACGGGATCCACATTGCTCGCACCAAGGACATCCAGGTCCTGGATTG
CGACATTAAAACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGAATAACCTGTGGCC
CGGGACACGGGATCAGCATCGGGAGCTTAGGCGACGACAACTCCGAGGCCCGAGTCTCCAACGTAACAGTCTACAAGGCG
CACCTCTCCGGCACGACCAACGGCGTGCGCATGAAGTCATGGCAGGGAGGAAAAGGGTACGCCACGGACGTCACGTTCGA
GGACATAACCATGGAGGATGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGTCGATCCCGCCAACCCTA
AGTCGTGCAAGAAACAAACTTCGGCAGTGGAGTTCAGCAACATTCGGTTCAAGGACATAAGGGGCACGAGCGCGACGAAA
GAGGCTATCAAGCTGGACTGCAGCGACACCGTCCCGTGCCGCGATATATTGTTGCAAGATGTGAAGCTTACTTTTCATGA
CCGTGGGCACAAGCACAAGCACGCTTCCGCAACAAGTGTATGCAACAAC-CCAAGCTAA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1D_1_TraesCS1D01G066400
GTCGAGCGGTTTGGCTGCGGTGCCCCCCCCCCCTTCTCCTTTTCCGGCGAGCCCTTGGGCTAACTCCGGTGGTTCTTCTT
CCGGACGGCTTGGCGTGCCGATGCCCGTCAGGATCGAGAGGAACGGCGCGGCCATAACAGCGGCGCTACTTTCTCCGGAG
AGGAATTTTTCTTTGCCCTGTTCTAGAGTTCTTTGGGGAGGGGAAAGTTCTTTGATTTGCACCGAAATCCTCAACCGAAA
CATGGCTGATACCATTGTTGTATTCTCTGATCGGTTAGGGTTAAAGATTCACGGTAGTCTTTACCTTTTCCTTGGATTGA
TGAGCCCGATGGGTGGCCATGGTGGACGGCGGCGGTAGTGATGTGTGGGCAGTGGCAGCGGTGGAGCTTCCCATCGCTTC
AGTGCCTCCCTCTGGATCGGATAGGGTTAGGAGTGGGGAACAGTGGCGGTGACGAACCTCGTACCCCGTGCCCCTGGTTC
CCACCTCCTCTTTATAGCACTGCGCGACAGGGGCCCACCAGCCTTGCTTGGGCTGGACGCCCCCGATCAGGGCGTGGGTC
AAGGGCCCAATGAGCCGTTGGGCCCATTGGTGGAGAGATCAATCTAACACTTATACTGCTGCCGGACTGAGCCCGAGTCG
GCTAGTTATCCCGACTTGAACAACCTGCAAAAGCTTTGTACGCCATAAAAGCACGACCAACGCCT-ACTTTTTCCATCAA
TCAACACCGCAACGCAACGCAACGCA-----AGAGAGAACAAGCTCGCAACGCACGAGAAG---------ATGGCTAGCT
AGCTACCTTCCGTGTACCAAAGGAGCTC-----GTAGATCAGCCAGGACATGTCGTCGTCCTTCCGCCGCCGTGCGTTGG
TAGTGCTGGCGGCAGTTCTGATCCTCGGGCTGCTATTGCTCCTCCTGGTGCCGGCCATTGCTCACGCAGACAGCATCGCC
---GCCGC------------TAGACGTACCACCAGCAACAACG---ACGTCCGCCCCAACCTAAGGCGGAAGAAGCTCAT
GCCTGATCAGAGCA---------TCAAGCTCGACCTACG-CAGCTACCACAGA------GCACCTGCTGCCGGGCGTCAC
CGCAAGCTACTCGAGCCTTCTCCGGGGCCTTCTCCCGCGCCTTCTCCCGAG------------CCTTCTC----------
-----------------AGAGCG---AAAACGACGT------CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACG
GCCAACAGGACGACACGCCGGCGTTCCGGGAAGCATGGGCCGCCGCTTGCGCCTCGCCTCAGCCGGCCACCCTCGTGGTC
CCCAGGGAGAAGACGTACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAGGTCCCCCGTCACCTTCAGGCTGGACGG
CACGCTGGTGGCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACGTCGATGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAG
CTCGTGCCGTGTGGACAAGAAGCTCAAGTGCGGCAACGCCCCCATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGG
TGGAGAACATCCAGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCGGGACGTGCTCCTCAAGGGCATC
ACCATCACCGCCCCCGGCGACAGCCCCATGAACGACGGGATCCACATTGCTCGCACCAAGGACATCCAGGTCCTGGATTG
CGACATTAAAACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGAATAACCTGTGGCC
CGGGACACGGGATCAGCATCGGGAGCTTAGGCGACGACAACTCCGAGGCCCGAGTCTCCAACGTAACAGTCTACAAGGCG
CACCTCTCCGGCACGACCAACGGCGTGCGCATGAAGTCATGGCAGGGAGGAAAAGGGTACGCCACGGACGTCACGTTCGA
GGACATAACCATGGAGGATGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGTCGATCCCGCCAACCCTA
AGTCGTGCAAGAAACAAACTTCGGCAGTGGAGTTCAGCAACATTCGGTTCAAGGACATAAGGGGCACGAGCGCGACGAAA
GAGGCTATCAAGCTGGACTGCAGCGACACCGTCCCGTGCCGCGATATATTGTTGCAAGATGTGAAGCTTACTTTTCATGA
CCGTGGGCACAAGCACAAGCACGCTTCCGCAACAAGTGTATGCAACAAC-CCAAGCTAACCGAATCTGGCATCAATGTAG
ATCCCAAGACCTGTTGATAAAACAACAACAACAACAACAACAACAACAACACATACATGGTTGTTGTATGTACAACCCAT
AATTTTTTGTACGTGCAAAGTAAATAGTATAATCTTGTGGATAT--GGATTTGACATTTATATACTGCAAATATTAGTAT
CTGTACAAATCATACACCTTGTGTCCAGTGGCGGAGCTTCATGGGGGCCAACCTGGCCATGGCCCCCCAAGCTCACAAGA
AAACATGTATATACTCCTTTGTATTAAGCCTATTTTTCATTAAAACTCAGCTAAAATAGTTANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTAGCCCATGCCCCCCCTCATAATTTCGGCTCAAGCTCCGCCACTGCTT
GTGTCGTTTATATGATTACCTTCTGAGAACTCAGTTTGTAAGGCGTACAATTAATTTTCTGGGTAAACAAGATACCGAGT
TGATCAAAGATTTTATGCGTGAGTGGTGTGAATTTTTTCGGAGGTCATGATCCCTATGTTCATGAGGTCATTGCCCGGTG
ACTCGGTTCTGAGCACTCTTGATCTTTGTTGTGG--------TTGCTAGTGACAACTTTTGGTACGGTGATTCAGTCCAT
CAAGCTTATCTCCACACGTGTGGTGCTAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr3D_72
-----------------------------------------------------------------------GTTCTTCTT
CCCCGCACCTCGGCTTGCCGATGCGTGTGGGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATCGAGAGGAACGGCGCGGCCTTGCGGCGGCG
CACTTTGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CGGCGAGCACGAGGCCCTCTCCGGTGATTTCTTTGCCCTGTAACT
TCAGGGTTCTTGTGGGAGGGGAAAGTTCTTTGATTTGC-----ACCGAAATCCTCAACCGAAACATGGCTGATACCATTG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTGTATGCTCTGATCGGTTA--GGTTTAAAGATTCACGGTAGTCTTTACCTTTTCC
TTGGATTGATGAGCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGATGGGTGGCCATGGTGGATGGCGGCGGTAGTGATGTGTGGGCAGTGGCAGCGGTGGAGCTTCCCAT
C-------------------------------------------------------------------GCTTCAGTGCCT
CCCTCTGGATCGGATAGGGTTAGGAGTGGGGAACAGTGGCGGTGACGAACCTCGTACCCCGTGCCCCTGGTCCCCACCTC
CTCTTTATAGCACTGTGCGACAGGGGCCCACCAGCCTTGCTTGGGCTGGACGCCCCCGATCAGGGCGTGGATCAAGGGCC
CAATGAGCCGTTGGGCCCATTGGTGGAGAGATCAACCTAACACT
>chr2D_72
-----------------------------------------------------------------------GTTCTTCTT
CCCCGCACCTCGGCTTGCCGATGCGTGTGGGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATCGAGAGGAACGGCGCGGCCTTGCGGCGGCG
CACTTTGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CAGCGAGCACGAGGCCCTCTCCGGTGATTTCTTTGCCCTATAACT
TCAGGGTTCTTGTGGGAGGGGAAAGTTCTTTGATTTGC-----ACCGAAATCCTCAACCGAAACATGGCTGATACCATTG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTGTAATCTCTAATCGGTTA--GGGTTAAAGATTCACAATAGTCTTTACCTTTTCC
TTGGATTGATGAGCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------CGATGGGTGGCCATGGTGGATGGCGGCGGTAGTGATGTGTGGGCAGTGGCAGCGGTGGAGCTTCCCAT
C-------------------------------------------------------------------GCTTCAGTGCCT
CCCTCTGGATCGGATAGGGTTAGGAGTGGGGAACAGTGGCGGTGACGAACCTCGTACCCTGTGCCCCTGGTCCCCACCTC
CTCTTTATAGCACTGTGCGACAGGGGCCCACCAGCCTTGCTTGGGCTGGATGCCCCCGATCAGGGCGTGGATCAAGGGCC
CAATGAGCCGTTGGGCCCATTGGTGGAGAGATCAACCTAACAC-
>chr1B_610
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------CTTATAGTGCTGCCGGGCACT--CCGAGTCG
GCTAGTTATCCCGACTTGAACAACCTGCAATATCTTTGCACACCATAAAAGCAAGACCAACGCCTTACTTTTTCCATCAA
TCAACAACGCAACGCAACGCAACGCAACGCAAGAGAGAACAAGTTAGCAACGCACGACAAGCAGAAAAGGTTAGCTAGCT
AGCTACCTTCCGTATA-CAAAGGAGCTC-----GTAGATTAGCAAGGACATGTCGTCCTT------CCGCCGTGCGCTGG
TAGTGCTGGCGACAGTTCTGATCCTCGTGTTGTTACTGCTCCTCCTGGTGCCGGCCATTGCTCACGCAGACAGCATT---
---GCCGCTGCCGCCGGCGGTAGACATACCGGCAGCAAC---G---ACGTTCGCCCCAACCTAAGGCGGAAGAAGTTCAT
GCCTGATCATCAGACCAGCAAGGTCGACCTACGCAGCTACC----ACCACAGA------GCACCTGCTGCCGGGCGCCAC
CGCAAGCTACTCGAGCCTTCTCCCGGGCCTTCTCCCGCACCT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1A_721
CAAGCAACGCA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AACGCAACGAAAGGCA-----AGAGAT-ACAAGCTCGCAACGCACGAGAAGCAAAAAAAGATAGCTAGCT
AGCTACCTTCCATATA-CCAAAGGAGG---------------------CATGTCGTCGTCCTTCCGCCGCCGTGCGCTGG
TAGTGCTGGCGGCAGTTCTCATCCTCGGGCTGCTATTGCTCCTCCTCGTGCCGGCCATTGCTCACGCAGACAGCATCGCC
---GCCGCCGCCGCCGGCGGTAGACGTACCAGCAGCAAC---G---ACGTTCGTCCCAACCTAAGACGGAAGAAGCTCAT
GCCTACTCAGACCC---------TCGACCTACGCGGCTACCGGCTACCACAGA------GCAGTTGCTGCCGGGCGCCAC
CGCAAGCTACTCGAGCCTTCTCCCGGGCCTTCTCCCGAGCCTTCCCCGGCGCCCTCTCCCGCACCTTCTCCCGCGCCTTC
TCCCGAGCCTTCT---CAGAGTGGTGAAAGCGCCGTCGC---CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACG
GCCAACACGACGACACGCCGGCGTTCCGGGAAGCATGGGCCGCGGTTTGCTCCTCGCCTCAGCCGGCCACCCTCGTGGTC
CCCAGGGAGAAGACATACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAGGTCCCCGGTCACCTTCAGGCTGGACGG
CAAGCTGGTGGCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCAATATTGAAT
TTATGCACCAGCCAACTCATCCAAAAGTCCGAACTGATGGAGAGAGATGGGCAATATATTTCAACACTCCCCCTCATGTC
TAGGCGACGTGGGATCGATGTAGGCCGCAGAATCGTTTTTATTTAATACTGCGTTGGCAGGGTCTTGAACTCAAGACCTC
TTGGCTCGGATACCATATTGAATTCATGCACCAGCCAACTCATCCAAAAATCCGAACTGATGGAGAGAGATGGGCAATAT
ATTTCAACACGCAACGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGGCGTGGTGGAAGAC
CTCTTGCCGGGTGGACAAGAAGCTCAAGTGCAGCAACGCCCCGATGGCGCTGCTGCTCAGCAGGTGTAACAACCTCACGG
TGGAGAACATCCGGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCAGGACGTGCTCCTCAAGGGCATC
ACCATCACCGCCCCCGGCGACAGCCCCATGAACGACGGGATCCACATTGCTCGCACCAAGGACATCCAGGTCCTGGATTG
CGACATTAAAACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGGATAACCTGTGGCC
CGGGACACGGGATCAGCATCGGGAGCTTAGGCGGCGACAACTCGGAGGCCCGAGTCTCCAACATAACAATCTACAAGGCG
CACCTCTCCGGCACGACCAACGGCGCGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTAGGCCAAGGACGTCACCTTCGA
GGACATAACCATGGAGGAGGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGCGGATCCCGCCAACCCTA
AGCCGTGCAAGAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATACGGGGCACCAGCGCGACGAAA
GAAGCTATCAAGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACATTTCATGA
CCGTGGGCACAAGCACATGCACGCTTCCGCGACAAGTGTATGCAACAATGCCAAGCTAACCGAATCTGGCACCAATGTAG
ATCCCAAGACCTGCTGAG---------------ACAACAACAACAACAACAACAACAACAA-------------------
---------------CAAAGTAAATAGTATAATCTTGTGGATAT--GGATTTGACATTTATGTACTGCAAATATTCGTAT
CTATACAAATCATACACCTTGTGTC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1D_728
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GCAACGCAACGCAGGGCA-----AGAGAG-ACAAGCTCGCAGCGCACGAGAAGCAGAAAAGGATAGCTAGCT
AGCTACCTTCTGTATA-CCAAAGGAGCTCGTATGTAGATCAGCCAGGACATGTCGTCGTCCTTCCGCCGCCGTGCGCTGG
TAGTGCTGGCGACGGTTCTGATCCTCGTGTTGTTACTGCTCCTCCTGGTGCCGGCCATTGCTCATGCAGACAGCATCGCC
---GCCGCCG---GCGGCGGTAGACGTACCACCAGCAAC---A---ACGTCCGCCCCAACCTACGACGGAAGAAGATCAT
GCCTGATCAGACCA---------TCGAGCTCGACCTACG-CGGCTACCACAGA------GCAGCTGCTGCCGGGCGCCAC
CGCAAGCTACTCGAGCCTTCTCCCGGGCCTTCTCCCGCGCCTTCTCCCGAG------------CCTCCTCCTGCGCCGTC
TCCCGAGCCTTCT---CAGAGTG---AAAACGCCGTCGAGGTCGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGCGACG
GCCAACAGGACGATACACCGGCATTCCGGGAAGCATGGGCCGCCGCTTGCGCCTCGCCTCAGCCGGCCACCCTCGTGGTC
CCCAGGGAGAAGACGTACCTCATGAAGCAGACCACCTTCTCGGGCAAGTGCAAGTCCCCCGTCACCTTCAGGCTGGACGG
CACGCTGGTGGCGCCCGCCAGCCGGTCGGCATGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAG
CTCGTGCCGGGTGGACAAGAAGCTCAAGTGCAGCAACGCCCCCATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGG
TGGAGAACATCCGGCTCCTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCGGGACGTGCTCCTCAAGGGCATC
ACCATCACCGCCCCCGGCGACAGCCCCATGAACGACGGCATCCACATTGCGCGCACCAAGGACATCCAGGTCCTAGATTG
CGACATTAAAACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCAAGGATAACATGTGGCC
CGGGACACGGGATCAGCATCGGGAGCTTAGGCAACGACAACTCCGAGGCCCGAGTCTCAAACATAACAATCTACAAGGCG
CACCTCTCCGGCACGACCAACGGCGCGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTACGCCAAGGACGTCACGTTCGA
GGACATAACCATGGAGGAGGTCCATAACCCCATAATCATTGACCAGAACTACTGCACATCGGCCGATCCCGCCAACCCTA
AGCCCTGCAAGAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATAAGGGGCACGAGTGCGACGAAA
GAGGCTATCAAGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACCTTTCGTGA
CCGTGGGCACAAGCACAAGCACACTTCCGCAACAAGTGTATGCAACAACGCCAAGCTAACCGAATCTGGCACCAATGTAG
ATCCCAAGACCTGCTGAG---------------ATAACAACAGCAACAACACATGCATGGTTGTTGTACGTACAACCCTT
AATTTTTTATATATGCAAAGTAAATAGTATAATCTTGTGGATATATGGATTCAACAGTTATATACTGCAAATATTAGTAT
GTGTGCAAATCATACACCGTGTGTC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr1B_847
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CCGCCGTGCGCTGG
TAGTGTTGGCGACAGTTCTGATCCTCGTGCTGTTATTGCTCCTCCTGGTGCCGGCCATTGCTCACGCAGACAGCATCGCC
ACCGCCGCCG---CCGGCGGTAGACGTACCACCAGCAAC---GACGACGTTCGCCCCAACCTAAGGCGGAAGAAGATCAT
GCCTGATCAGACCA---------GCAAGCTCGACCTACG-CAGCTACCACCACAGAGCGGCAGCTGCTGCCGGGCGCCAC
CGCAAGCTACTCGAGCCCTCTCCCGGGCCTTCTCCCGCACCTTCTCCGGGG------------CCTTCTCCCGCGCCCTC
TCCCGAGCCTTCTTCTCAGAGTGGTGAAAGCGCCGT------CGAGGTCGACGTGGCGAGCTACGGAGCCGTCGGTGACG
GCCAACAGGACGACACGCCGGCGTTCCGGGAAGCATGGGCCGCCGCTTGCTCCTCGCCTCAGCCGGCCACCCTCGTGGTC
CCCAGGGAGAAGACGTACCTCGTGAAGCAGACCACCTTCTCGGGCAAGTGCAAGTCCCCCGTCACCTTCAGGCTCGACGG
CAAGCTGGTGGCGCCCGCCAGCCGATCGGCGTGGCCCGAGGAGAACATGAGGTGGTGGATCATGTTCCGCA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ACGTCGACGGGCTCACCGTGACCGGCGACGGGACCATCGACGGCAACGGCGAGACGTGGTGGAAGAG
CTCGTGCCGGGTGGACAAGAAGCTCAAGTGCGCCAACGCCCCGATGGCGCTGCTGCTCAGCAGGTGCAACAACCTCACGG
TGGAGAACATCCAGCTACTCAACAGCCAGCAGATCCACATGTCGGTCGAGGACTGCCAGGACGTGCTCCTAAAGGGCATC
ACCATCACCGCCCCCGGCGACAGCCCCATGAACGACGGCATCCACATTGCGCGCACCAAGGACATCCAGGTCCTGGATTG
CGACATTAAAACAGGGGACGACTGCATGTCCATCGAGACCGGAACCGAAAACCTCTACGCTTCGAGGATAACCTGTGGCC
CGGGACACGGGATCAGCATCGGGAGCTTAGGCGACGACAACTCCGAGGCTCGAGTCTCTAACATAACAGTCTACAAGGCG
CACCTCTCCGGCACGACCAACGGCGTGCGCATGAAGTCGTGGCAGGGAGGAAAAGGGTACGCCAAGGACGTCACGTTCGA
GGACATAACCATGGAGGAGGTCCATAACCCCATAATCATCGACCAGAACTACTGCACATCGGTCGATCCCGCCAACCCTA
AGCCGTGCAAGAAACAAACTTCGGCGGTGGAGTTCAGCAACATTCGGTTCAAGAACATAAGGGGCACGAGCGCGACGAAA
GAGGCTATCAAGCTGGACTGCAGCGACACCGTCCCATGCCGCGATATATTGTTGCAAGACGTGAAGCTTACTTTTCATGA
CCGTGGGCACAACCACAAGCACGCTTCTGCAACAAGTGTATGCAACAACGCCAAGCTAACCGAATCTGGCACCAACGTAG
ATCCCAAGCCCTGCTGAG---------------ACAACAAC------AACACATGCATGGTTGTTGTACATACAACCCTT
AATTTTT-GTGCGTGCAATGTACATAGTATAATCTTGTGGATAT--GGATTCGACATTTATATACTGCAAATATTAGTAT
CTGTACCAATCATACACCTTCTGTCA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTTATTCGATTACCTTCTGAGAACTGCATTCGTAAGGCGTACAACTAATTTCCTGGATAAACAAGATACTGAGT
TGATCAAAGATTTGATGCGTGGGTGGTGTGAATTTCTTCGGAGGTCATGATCCCTATGTTCATGAGGTCATTGCCCGGTG
ACTCGGTTCGTAGCACTCTTGATCTTTGTTGTGGACTTGTGGTTGCTAGTGACAACTTTTGGTATAGTGCTTCAGTCCAT
CGAGCTTA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
--SSS-SS--S---S---------SS--SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------S-SSSSS--------
------------------------------S-S-----S--S-----------S--------------------------
------S-----------------------------------------------------------------S-------
-------------S--S-----------------------------------------------------------S---
--------------------------------------------------------------------------------
---------------------------------------SSS--------------------------------------
-----------S----------------------------------------------------------------S---
-----------------------S--------------------------------------------------------
---------------------S----------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------S-----------------
--------------------------------------S-------------------------S---------------
------------------S-------------------------------------------------------------
--S----------------------S---------------------------S--------------------------
-----------------------------------S-----------------------S--------------------
-----------------------------------------------------------------------S--------
-------------S---SSSSSSSSSSSSSSSS-----------------------------------S---------S-
--------------------------------------------------------------------------------
-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----SS------------------SSS--S-------------S------S----S------------S----
-------------S-------S-------------S--------------------------------------------
---------SS-----------------------------------------------------SS---S----------
-S------SSSSS-S-S-SS-S-SSS-S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_125
--------------------------------------------------------------------------------
-------------------------CGTCAGGATCGAGAGGAACG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2279
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------ATGGCAGGGAGGAAAAGGGT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GAGCTTCCCATCGCTTC
AGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GTGCCGCGATATATTGTTGCA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_427
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CCCTCTGGATCGGATAGGGT-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2632
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TCAATGTAG
ATCCCAAGACCTGT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
