>input_sequence_56252
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----------------------------------------GCATCGCCAACTTCCTCGCGTCTCCTCTCGCACGCGTGCA
GGAGATACGCAGCCATGGGCCGCGCTTCCACCGACCACTCCACCTCCGGCCAGGACGCGCCGCCCCAGCGGCCGCGTCGC
GGCGGCCGCCTCCGACTTCGGCGCCGCCGCCGCCGCCGCCGCTCCCCCACGCCAACCTCCGACGACCCAAGTGCAAGCTC
CCAAGAACGCACCCCTTCGTTCTCCGAGGCATCAGTGTCCGCGCCACCCTCTTACATCCCTTCCCCGGACATCCCTGCCG
GCACCTACGTCGCCGTCGCCCCTCTCCCCGTCTTCCGCGGCGACCCTGGCGAGTGCCCCGACGCCCACCTCGCCCGCTTC
GACCGCGTCTGCCGCGCCAACAACGCCACGTCCACGGCCGACGCCGCCCGTATCTTCCCGGCCTCCCTCGACGCCGATGC
CGCGCTGTGGTACGAGCTCGCGGCCCCCGCTTCCTCGCCTCCGCCGTGGCACGCCGTCCGCGCGGCCTTCGTCGACTTCT
TCCGCCCTCCAGGCGCCGCCAACCGCGCGCGCGCCGAACTCATGGCGCTGAGGCAGCGCCCCGGCGAGGCTGTCAACAGG
TACCACCTCCGCATGCAGGGGATCCTCCGGCGGTTCCCGGACGCCAGCACGGACATCCCCGACGCGTTCCTCACGTCCGC
GTTCGTCCACGGCCTACGCGCCGAGTTCCAGGACTGGGTGGCGCCGCAGCGTCCGGAGGCGCTGGACGAGGCCGTGGCGC
TGGCACTGAGCTGGGAGCGCGCCGAGGGCTTGCGGGAGGCGCGGCGCGCGGCGAAGGCGTCGGTGGCCGGCAACGGTGGC
GTCAGGTGCGGCTTCTGCGGCGCGGAAGGGCACGAGGAGCCGGGCTGCGAGGTGAGGAAGAGAATGATGGAGTTGTGGCT
GAGGAGCAGTAGCGGTGGGAGGGGAAGCACCATGCTGGGGACGATGGGGGAGGAGGCCGAGGAGGGAGGCGGGAGCGCGA
GGCTCGGGCGGCTCAGGAGCGCGGTGAGCGCGCGCTCGGCGCGGTGCCAGTGCCGCAAGCATCAGTGCGGGAAAAAGGCC
GCGCCGGCGAGCGAGGTCGCTGGAGGCGGCGAAGGGAATGGCGCGGCCGCGGACAAGTGAATTCAAGTGTTCTTCGCAGT
TCGTAG--------------TACTTTGTAATACTCTGTATACGTATGTAGTCCGTGCACGTTACCCATATCTAATGGCAT
ACACAATAACTATATGTGAGTCGCCTGAA---------------------------------------------------
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>chr3A_1_TraesCS3A01G133800
GAAGATGTTGAGGGATGAGCTGCTATAACAAGTCGGCCATGATGATAAATAGATAAGGCGAGAGTGGGTCGCCCTGACGT
AAACCATTTTTACATGTGATCCAAGGCCCTAGGATGCTGTTGAATAGAATTGTAGTTTTGCCAGTTGAAAGGATGTTTTG
TATCCATAACCTAAATTTATCAGGGAAGCTTCTAAGAAGAAGGATTTTACCCAGGAGGCCCAGAAAATCAAGTCAAAGAC
TTTCCTAAAATCTAACTTGAGCACGGTAGTGGAGAAATTTTCTATTATGATAGGTATTAATTAGATCAGCAACATATACA
AAGTTTTCAGCAATGTTCCTACCGGAGATGAATCCGGTATGATCTCCATGGACAAAGTTAGGAAAAGGTCTTTAACCTAT
CTGTAAGAAGTTTGGCAATGTTATGCTGTGACCCAAATTCAAATATAAAGATAAATGCTAACTTCTGACGAGAGAGCGGA
GCGAGACCCGTCGCCAGCAGGCTTGGGCCGAAGCGGAGCGTAGCGAGGCGAGAGGGCGTGGGGCCGGAGAGATCAGCGAT
GGTGGTGGCGTGGAGGGGCGTCACGGAAGTGGCGGAAGTTTCCCTCCAGCCAAATCGCACATGAAATAGAGGGAGTGGCA
AAACAGAGGGTAAAAACCGAATATTTGACGGATGTGGGCCAAAATATGCAGTTCACTGCAATTTTTTTTACAGATCATAC
AATTTTAAAAGATTTGGTTAGGACGAGTTCTTGTTTCGGCCTGTAAAATGTCAGTTATTTTAGAGGAAAGTGGGGATATA
GCGCATCCTAGAGTTGCTCTAGGTAGGTAAGGTATAAACATTCTTTAGGAAATCTTTGCAAAAACCGGTGGCGGCCCGGA
ATTGCATTTGTTTGCAGTTAACAACACCATACAAGCCCCCGCAAGAAAAGAAAAGAAAAAAAGAAACAGCATACAAGCAA
CTGCCCTCGAGATACCAAACCGTCGCGCCATTTCCGTCTTGCATCGCCAACTTCCTCGCGTCTCCTCTCGCACGCGTGCA
GGAGATACGCAGCCATGGGCCGCGCTTCCACCGACCACTCCACCTCCGGCCAGGACGCGCCGCCCCAGCGGCCGCGTCGC
GGCGGCCGCCTCCGACTTCGGCGCCGCCGCCGCCGCCGCCGCTCCCCCACGCCAACCTCCGACGACCCAAGTGCAAGCTC
CCAAGAACGCACCCCTTCGTTCTCCGAGGCATCAGTGTCCGCGCCACCCTCTTACATCCCTTCCCCGGACATCCCTGCCG
GCACCTACGTCGCCGTCGCCCCTCTCCCCGTCTTCCGCGGCGACCCTGGCGAGTGCCCCGACGCCCACCTCGCCCGCTTC
GACCGCGTCTGCCGCGCCAACAACGCCACGTCCACGGCCGACGCCGCCCGTATCTTCCCGGCCTCCCTCGACGCCGATGC
CGCGCTGTGGTACGAGCTCGCGGCCCCCGCTTCCTCGCCTCCGCCGTGGCACGCCGTCCGCGCGGCCTTCGTCGACTTCT
TCCGCCCTCCAGGCGCCGCCAACCGCGCGCGCGCCGAACTCATGGCGCTGAGGCAGCGCCCCGGCGAGGCTGTCAACAGG
TACCACCTCCGCATGCAGGGGATCCTCCGGCGGTTCCCGGACGCCAGCACGGACATCCCCGACGCGTTCCTCACGTCCGC
GTTCGTCCACGGCCTACGCGCCGAGTTCCAGGACTGGGTGGCGCCGCAGCGTCCGGAGGCGCTGGACGAGGCCGTGGCGC
TGGCACTGAGCTGGGAGCGCGCCGAGGGCTTGCGGGAGGCGCGGCGCGCGGCGAAGGCGTCGGTGGCCGGCAACGGTGGC
GTCAGGTGCGGCTTCTGCGGCGCGGAAGGGCACGAGGAGCCGGGCTGCGAGGTGAGGAAGAGAATGATGGAGTTGTGGCT
GAGGAGCAGTAGCGGTGGGAGGGGAAGCACCATGCTGGGGACGATGGGGGAGGAGGCCGAGGAGGGAGGCGGGAGCGCGA
GGCTCGGGCGGCTCAGGAGCGCGGTGAGCGCGCGCTCGGCGCGGTGCCAGTGCCGCAAGCATCAGTGCGGGAAAAAGGCC
GCGCCGGCGAGCGAGGTCGCTGGAGGCGGCGAAGGGAATGGCGCGGCCGCGGACAAGTGAATTCAAGTGTTCTTCGCAGT
TCGTAG--------------TACTTTGTAATACTCTGTATACGTATGTAGTCCGTGCACGTTACCCATATCTAATGGCAT
ACACAATAACTATATGTGAGTCGCCTGAATTTATATTTTGGGTCAGTTGATATTTGAAAGAAGAAGGAGGCTCGCCGGAG
GAAAGGAGGAAGCAGCTGCCGGTGATCTATATTTGGGTGGCAGGCTCGCCGGCAATCTATCTTAGGATGGTAGTGTGGCA
GGCTCGCTGACAATCTATCATAGAGTGGCAGGCTCGCCGGCGCTATATCTTAGAGCATCTTCAACAGCCGCACAACGCGC
CACGCGCTAAAAGTCATGATACAGCGTCGGGTTAGTCAGCTTTAGCGCACGGCGGTGCGCTGGCTTCAGTGGCCGCCACA
AATTAAAGCGCGCCCATGCCGTTCCAGCAGGTGCGCTATATTT-A---G-CTTTTCCTA--CTACGATTCGATACATATT
TGGCTTCGTGGGTA--GTTCTCCTACTAATATTACTCGTCCGACTCGGACTCTGTCTCGGTGATGTCCTCCTCCGACGTC
GGAGCGTAGGCGTCAAGAAACCGCTCGTCGCCGGAGTTCCAAGAAGACGCATCTCCTAGCGCTTGGTTGTATTTAGCGAC
CTCCTTCCGTGTTCGCTTGTCCTTGTGATAGTCGGCTCGCTCCTCCCTCCTCTTCTCCCTCTTCGCCCTCCTCTGGGCGA
AGAACTGTTCCTTGTTGG---TGTCGTCTGAGAAGCGATGGCTCCACATCGCCATGGCTTGCTCGTCCATCTCGGCCAGC
CTGAGACGATGCTCCCGCTTCCGGTGCTTGCAACGATCCTCGTTGGTGAGAAGCCGCGGGAAAGGCGTCAACTCCTGTGC
ACGCTCCCGCGTCGCCACATCGGCGAAGTTCATGTCCTGACGGGACCGCAGGAAGCGCCACGCCGCAGCGTCGTACGCAC
GGGTGCCCTCCTGGGCGGTGTCGAAGGTTCCGAGACGGAGCCGCATGCCGCC-GCCC---GATCGAATCTCGGCGGAGTA
GGTGCCGGACGGACGCACGCGAACGCCGCGGTAGCCCGTACCTCCCCGGCGGCGAGGCGGCATGGTGGCGCGGTGGTGGC
GTGTT
>chr3D_833
TATAA---------------------------------------------------------------------------
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--------------------------------------CATTCTTTAAGAAATCTTTGGAATATCGTTGGCAGGCCCGGA
ATTGCATTTGTTTGCAGTTAACAACAGCATACACGCTCCCTAAAAAA----------------AAACAGCATACACGCAA
CTGCCCTCGAGACACCAAACCGTCGCGCCATTTCCGTCTTGCATCGCCAACTTCCTCGCGTCTCCTCTCGCACGCGTGCA
GGAGATACGCAGCCATGGGCCGCGCTTCCACCGACCACTCCACCTCCGGCCAGGAAGCGCCGCTCCGGCGCCATCGTCGC
GGCGGCCGCCTCCCACTTCGGCGCCGCCGT------CGCCGCTCCCCCACGCCAACCTCCGACGACCCAAGTGCAAGCTC
CCAAGAACGCACCCCTTCATTCTCCGAGGCATCAATGTCCGCGCCACCCTCTTACATCCCCTCCCCGGACATCCCTGCCG
GTACCTACGTCGCCGTAGCCCCTCTCCCCGTCTTCCGCGGCGACCCCGGCGAGTGCCCCGACGGCCACCTAGCCCGCTTC
GACCGCGTCTGCCGCGCCAACAACGCCACGTCCACGGCCGATGCCGCCCGTATCTTCCCGGCGTCCCTCGACGCCGATGC
CGCGCTGTGGTACGAGCTCACGGCCTCCGCTTCCTCGCCTCCGCCGTGGCACGCCGTCCGCGCGGCCTTCGTCGACTTCT
TCCGCCCGCCCGGCGCCGCCAACCGCGCGCGCGCCGAACTCATGGCGCTGAGGCAGCGCCCCGGCGAGACTGTCAACAGG
TACCACCTCCGCATGCAGGGGATCCTCCGGCGGTTCCCGGACGCCAGCACGGACGTCCCCGACGCGTTCCTCAAGTCCGC
GTTCATCCACGGCCTGCGCGCCGAGTTCCAGGACTGGGTGGCGCCGCAGCATCCGGAGGCGCTGGACGATGCCGTGGCGC
TGGCACTGAGCTGGGAGCGCGCCGAGGGCTTGCGGGAGGCGCGGCGCGTGGCGAAGGCGGCGGTGGCCGGCAACGGTGGC
GTCAGGTGCGGCTTCTGCGGCGCGGAGGGGCACGAAGAGCCGGGCTGCGAGGTGAGGAAGAGAATGATGGAGTCGTGGCT
GAGGAGCAGTAGCAATGGGAGGGGAAGCGCCATGCTGGGGAAGGTCGGGGAGGAAGCCGAGGAGGGAGGCGGGAACGCGA
GGCTCGGGCGGCTCGGGAGCGCGGTGAGCGCGCGCTCGGCACAGTGCCAGTGCCGCAAGCATCGGTGCTGGAAAAAGGCC
GCGCCGGCGAGCGAGGTCGATGGAGGCGGCGAAGCAAATGGCGCAGCCGCGGACAAGTGAATCCAACTGTTCTTCGCAGT
TCGTACATTGTAGGAATTCCTACTTTGTACTCTGTA------GTATGTAGTCCGTTCAAGTTACACATATGTAATGGCAT
AC------------------------------------------------------------------------------
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>chr3B_945
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----------------------------------------------------------------AACAGCATACACGCAA
CTGCCCTCGAGACACCAAACCGTCGCGCCATTTCCGTCTTGCATCGCCAACTTCCTTGCGTCTCCTCTCGCACGCGTGCA
GGAGATACGCAGCCATGGGCCGCGCTTCCACCGATCACTCCACCTCCGGCCAGGAAGCGCCGCTCCGGCGCCATCGTCGC
GGCGGCCGCCTCCCACTTCGGCGCCGCCGC------CGCCGCTCCCCCACGCCAACCTCCGACGACCCAAGTGCAAGCTC
CCAAGAACGCACCCCTTCATTCTTGGAGGCATCAATGTCCGCGCCACCCTCTTACATCCCCTCCCCGGACATCCCTGCCG
GTACCTACGTCGCCGTCGCCCATCTCCCCGTCTTCCGCGGCGACCCCGGCGAGTGCCCCGACGGCCACCTAGCCCGCTTC
GACCGCGTCTGCCGCGCCAACAACGCCACGTCCACGGCCGATGCCGCCCGTATCTTCCCGGCGTCCCTCGACGCCGATGC
CGCGCTGTGCTACGAGCTCACGGCCTCCGCTTCCTCGCCTCCGCCCTGGCACGCCGTCCGCGCCGCCTTCGTCGACTTCT
TCCGCCCTCCCGGCGCCGCCAACCGTGCGCGCGCCGAACTCATGGCGCTGAGGCAGCGCCCCGGCGAGGCTGTCAACAGG
TACCACCTCCGCATGCAGGGGATCCTCCGGCGGTTCCCGGACGCCAGCACGGACGTCCCCGACGCGTTCCTCAAGTCCGC
GTTCATCCACGGCCTGCGCGCCGAGTTCCAGGACTGGGTGGCGCCGCAGCATCCGGAGGTGCTGGACGATGCCGTGGCGC
TGGCACTGAGCTGGGAGCGCGCCGAGGGCTTGCGGGAGGCGCGGCGCGCGGCGAAGGCGGCGGTGGCCGGCAACGGTGGC
GTCAGGTGCGGCTTCTGCGGCGCGGAGGGGCACGAAGAGCCGGGCTGCGAGGTGAGGAAGAGAATGATGGGGTCGTGGCT
GAGGAGCAGTAGCAGTGGGAGGGGAAGCGCCATGCTGGGGAAGGTCGGGGAGGAAGCCGAGGAGGGAGGCGGGAGCGCGA
GGCTCGGGCGGCTCTGGAGCGCGGTGAGCGCGCGCTCGGCGCAGTGCCAGTGCCGCAAGCATCAGTGCTGGAAAAAGGCC
GCGCCGGCGAGCGAGGCCCATGGAGGCGGCGAAGCGAATGCCGCGGCCGCGGACAAATGAATCGAAGTGTTCTTCGCAGT
TCGTA---------------------------------------------------------------------------
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>chr7D_2423
CCGGTTCTATATGC------------------------------------------------------------------
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-----------------------------------------------TCTAAGAGCATCTCCAACAGCCGCGCAACGCGC
CGCGCGCTAAAAGTCAGAATACAACGCCGGGTTAGCCAGCTTTTGCGCATGGCGGTGCGCTGGCTCCAGCGGCCGCCGCA
AATTAAAGCGCGCCCACGCCGCTCCAGCAGGCGCGCTATATTTCATCAGTTTTTTCCTA--CTACGATTCGATACATATT
TGGTTTCGTAGATA--GTTCTCTTACTACTACTACTTGTCCGACTCAAACTCTGTCTCGGTGATATCCTCCTCCGACGTC
GGAGCGTAGGCGTCAAGGAACCGCTCGTCGCCGGAGTTCTAGGAGGACGCATCTCCTAGCGCTTCGTTGTATTTAGCGGC
CGCCTTCCGCGTTCGCTTCTCCTCGCGATAGTCGGCTCGCTCCTCCCTCCTCTTCGCCCTCTTCGCCCTCCTCTGGGCGA
AGAATTGTTCCTCGTTGG---TGTCTTCCGTGAAGCGATGGCTCCACAGCGCCATGGCTTGCTCGTCCATCTCGGCCAGC
CTGAGACGATGCTCCCGCCTCCGGTGCTTGCGACGATCCTCGTCGGTGAGAAGCCGCGGGAAAGGCGCCAACTCCTGTGC
CCGCTCCCGCGTCGCCACGTCGGCGAAGTTCATGTCCTGACGGGACCGCAGGAAGCGCCACGCCGCAGCGTTGTACGCGC
GGGCGCCCTCCTGGGCGGTGTCGAAGGTTCCGAGACGGAGCCGCATGCCGCCGGCCC---GACCGAATCTCGGCGGAGTA
GGTGCCGGACGGACGCACGCGGACGCCGCGGTAGCCCGTACCTCCACGCCGGCGAGGCGGCATGGTGGCGCGGTGGTGGC
GTGT-
>chr5A_2434
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-----------------------------------------------TCTTAGAGCATCTCCAACAGCCGCGCAACGCGC
CGCGCGCTAAAAGTCATGATACAATGCCGGGTTAGCCTTTTTTTGCGCGCGGCGGTGCGCTGGCTCCAGCTGCCGCCGCA
AATTAAAGCGCGCCCACGCCGCTCCAGCAGGCGCGCTATATTTCA---A-TTTTTTCTA--CTATGATTCGATACATATT
TGGTTTCGTAGATA--ATACTCCTACTA---CTACTCGTCCGACTCGGACTCTGTCTCAGTGATGTCCTCCTCTGACGTC
AGAGCGTAGGCGTCAAGGAACCGCTCGCCGCCGGAGTTCTAGGAGGACGCATCTCCTAGTGCTTGGTTGTATTTAGCGGC
CACCTTCCGTGTTCGCTTGTCCTCGCGATAGTCGGCTCGCTCTT-CCTCCTCTTCGCCCTCTTCGCCCTCCTCTGGGCGA
AGAACTATTCCTCGTTGG---TGTCTTTCGGGAAGCGATGACTCCACATCGCCATGGCTTGCTCGTCCATCTCGGCCCGC
CTGAGACGATGCTCCCGCCTTCGGTGCTTGCGACGATCCTCGTCGGTGAGAAGCCGCGGGAAAGGGGCCAACTCCTGTGC
GTGCTCCCGCGTTGCCACGTCGGTGAAGTTCATGTCCTGACGGGACCACAGGAGGTGCCATGCCACAGCGTCGTACGCGC
GGGCGCCCTCCTGGGAGGTGTCGAAGGTTCCGAGACGGAGCCGCATGCCGCCG-CCC---GATCGAATCTCGGCGGAGTA
GGTGCCGGACGGACGCACGCGGACGCCGCAGTAGTCCGTACCTCCCCGACGGCGAGGCGGCATGGTGGCGTGGTGGTGGC
GTGT-
>chr4A_2434
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-----------------------------------------------TCTTAGAGCATCTCCAACAGCCACGTAACGCGC
CTCGTGCTAAAAGTCAGAATACAGCGCCGGGTTAGCCAGCTTTTGCGTGTGGCGGTGCGCTAGCTCCAGCGGCCACCGCA
AATTAAAGCGTGCCCACGCCGCTCCAGCAGGCGCGCTATATTTCATTAG--TTTTTCTA--CTACGATTCGATACATAAT
TGGTTTCGTAGATA--GTTCTCCTCCTACTACTACTCGTCCGACTCAGACTCTGTCTCGGTGATGTCCTCCTCCGACGTC
GGAGCTTAGGTGTCAAGGAACCGCTCATCGCCGGAGTTCCAGGAGAACGCATCTCCTAGCGCTTCGTTGTATTTAGCGAC
CGCCTTCCCCGTTCGCTTGTCCTCATGATAGTCGGCTCGCTCCTCCCTCCTCTTTGCCCTCTTCTCCCTCCTCTGGGCGA
AGAACTATTCCTCATTGG---TGTCTTCCGGGAAGCGATGGCTCCATAGCGCCATGGCTTGCTCGGCCATCTCAGCCATC
CTGAGATGATGATCCCGCCTCCGGTGCTTGCGATGATCCTCGTCGGTGAGAAGCCGCAGGAAAGGCGTCAACTCATGTGC
CCGCTCCCGCGTCACCACGTCGGCGAAGTTCATGTCTTGACGGGACCATAGGAGGCTCCACGCTGCAACATCGTACGTGC
AGGCTCCCTCCTGGGTGGTGTCGAAGGTTCTGAGACGGAGCCGCATGCCACCG-CCC---GACCGAATCTCGGCGGAGTA
GGTGTCGGATGGACGCACGCGGACGCTGTGGTAACTCGTACCTCCCCGGCAGCAAGGCAGCATGGTGGCGCGGTGGTGGC
GTGT-
>chr1A_2435
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------------------------------------------------CTTAGAGCATCTCCAACAGCCGTGCAACGCGC
CGCGCGCTAAAAGTCACGATACAGTGTCGGGTTAGCCAGTTTTTGCGCGCGGCGGTGCGCTGGCTCCAGCGGCCGCCGCA
AATTAAAGCGCACCCACGCCGCTCCAGCAGGCGCGCTATATTTCA---G-TTTTTTCTA--CTATGATTCGATACATATT
TGGTTTCGTAGATA--ATTCTCCTACTACTACTACTCGTCCGATTCGGACTCTGTCTCAGTGATGTCCTTCTCCGACGTC
GGAGCGTAGGCGTCAAGGAACCGCTCGTCGCCGGAGTTCCAGGAGGACGCATCTCCTAGCGTTTGGTTGTATTTAGCGAC
CGCCTTCCGCGTTCGCTTGTCCTCGCGATAGTCGGCTCGCTCCTCCCTCCTCTTCGCCCTCTTCGCCCTCCTCTGGGCGA
AGAACTGTTCCTTGTTGG---TGTCTTCCGGGAAGCGATGGCTCCACAGCGCCATGGCTTGCTCGTCCATCTCGGCCAGT
CTGAGACGATGCTCCCGCCTCCGGTGCTTGCGA----CCTCGTCGGTGAGAAGCCGCGGGAAAGGCGCCAACTCATGTGC
GCGCTCCCGCATCGCCACGTCGGCGAAGTTCATGTCCTGACGGGACCGCAGGAGGCGCCACGCCGCAGCGTCGTACGCGC
GGGCACCCTCCTGGGCGGTGTCGAAAGTTCCGAGACGCAGCCGCATGCCGCCG-CCGCCGGACCGAATCTTGGCGGAGTA
GGTGCCGGACGGACGCACGCGGACGCCGCGATAGCCCGTACCTCGCTGGCAGCGAGGCGGCATGGTGGCGCGATGGTGGC
TTGT-
>chr5D_2436
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-------------------------------------------------TTAGAGCATCTCCAACAGCCGCGCAACGCGC
CGCGCGCTAAAAGTCACGATACAGCGCCGGGTTAGCCAGCTTTTGCGCGCGGCGGTGCGCTGGCTCCAGCAGCCGCCGCA
AATTAAAGCGCGCCCACGCCGCTCCAGCAGGCGTGCTATATTTCA---G-TTTTTTCTACTCTACGATTCGATACATATT
TGGTTTCGTAGATA--GTTCTACTACTACTACCAGTTGTCCGACTCGGACTCTGTCTCAGTGATGTCCTCCTCCGACGTC
GGAGCGTAGGCGTCAAGGAACCGCTCGTCGCCGGAGTTCCAGGAGGACGCATCTCCTAGCGCTTGGTTGTATTTAGCGAC
CGCCTTCCGCGTTCGCTTGTCCTCGCGATAGTCGGCTCGCTCCTCCCTCCTCTTCGCCCTCCTCGCCCTCCTCTGGGCGA
AGAACTGTTCCTTGTTGG---TGTCTTCCGGGAAGCGATGGCTCCACAGCGCCATGGCTTGCTCGTCCATCTCGGCCAGC
CTGAGACGATGCTCCCGCCTATGGTGCTTGCGACGATCCTCGTCAGTGAGAAGCCGCGGGAAAGGCGCCAACTCCTGTGC
GCGCTCCCGCGTCGCCACGTCGGCGAAGCTCATGTCCTGACGGGATCGCAGGAGGCGCCACGCCGCAGCGTCGTACGCGC
GGGCGCCCTCCTGGGCGGTGCCGAAGGTTCCGAGACGGAGCCGCATGCCGCCG-CCC---GACCGAATCTCGGCGGAGTA
GGTGCTGGACGGACGCATGCGGACGCCGCGGTAGCCCGTACCTCCCCGGCGGCGAGGCGGCATGGTGGCGCGGTGGTGGC
GTGT-
>chr2A_2437
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--------------------------------------------------TAGAGCATTTCCAACAGCCGCGCAACGCGC
CGTGCGTTAAAAATCACGATACAACGCCGGGTTAGCCAGCTTTTGCGTGCGGCGGTGCGCTGGCTCCAGCGGCCGCTGTA
AATTAAAGCGTGCTCACGCCGCTTCAGCAGGCGCGCTAAATTTCA---G-TTTTTTCTA--CTACGATTCGATACATATT
TGGTTTCGTATATATAGTTCTCCTACTACTACTACTCGTCCGATTCGGACTCTGTCTCAGTGATGTCCTTATCCGACGTC
GGAGCGTAGGCGTGAAGGAACCGCTCGTGGCTGGAGTTCCAGGAGGATGCATCTCCTAGCGCTTGGTTGTATTTAGCGAC
CGCTTTCCGCGTTCGCTTGTCCTCGCGATAGTCGGCTCGCTCCTCCCTTCTCTTCGCCCTCTTCGCCCTCCTCTGGGCGA
AGAACTGTTCCTCGTTGG---TGTCTTCCGGGAAGCGATGGCTCCACAGCGCCATGGCTTGCTCGTCCATCTCGGCCAGT
CTGAGACGATACTCCCGCCTCCGGTGCTTGCGATGATCCTCGTCAGTGAGAGGCCGCGGGAAAGGCGCCAACTCCTGTGC
GCGCTCCCGCGTCGCCACGTCGGCGAAGTTCATGTCCTGACGGGACCGCAGGAGGCGCCACGCCGCAGCGTCGTACGCGC
AGGCACCCTCCTGGGCGGTGTCGAAGGTTCCGAGACGGAGCCGCATGCCGCTG-CCC---GACCGAATCTCGACGGAGTA
GGTGCCGAACGGACGCACGCGGACGTCGCGGTAGCCCGTACCTCCCCGGCGGCGAGGCGGCATGGTGGCGCGGTGGTGGC
GTGT-
>chr6A_2438
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---------------------------------------------------AGAGCATCTCCAACAGCCGCGCAACGCGC
CGCGCGCTAAAAGTCACGATAGAACGTCGAGTTAGCCAGCTTTTGCACGCGGCAGTGCGCTGGCTCCAACGGCCGCTGCA
AATTAAAGTGCGCCCATGCCGCTTTAGCCGGCGCGCTATATTTTA---A-TTTTTTCTA--CTACGATTCGCTACATATT
TGGTTTCGTAGATA--ATTCTCCTATTATTACTACTCGTTTGACTCAGACTTTGTATTAGTGATGTCCTCCTCCGACGTC
GGAGCATAGGCGTCAAGGAGCCGCTCGTCGCCGGAGTTCCAGAAGGACGCATCTCCTAGCGCTTGGTTGTATTTAGCGAC
CGCCTTCCGCGTTCGCTTATCCTCGCGATAGTCGGCTTGCTCCTCCCTCCTCTTCGCCCTCTTCGCCCTCTTTTGGGTGA
AGAACTGTTCCTCGTTGT---TGTCTTCCAGGAAGTGGTGGCTCCACAACGCCATGGCTTGCTCGTCCATCTCGGCCAGC
CTGAGACGATGCTCCTGCCTCCGGTGCTTGCGACGATCCTCGTCGGTGAGAAGCCGCAGGAAAGGCGCCAACTCCTGCGC
GCGCTCCTACGTCGCCACATCGGCGAAGTTCATGTCCTGACGGGACCGTAGGAGGCGCCACGCCGCAGCGTCGTACGCGC
GGGCGCCCTCCTGGGCGGTGTCGAAGGTTCCGAGACGGAGCCGCATGCCCCCG-CCC---GACCGAATCTCGGCGGAGTA
GGTGCTGGACGGCCGCACGCGGACGCCGCACTAGCCCGTACCTCCCCGGCAACGAGGCGGCATGGTGGCGCGGGGGTGGC
GTGT-
>chr4A_2438
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---------------------------------------------------AGAGTATCTCCAACAGACGTGCAACGCGT
CGCGTGTTAAAAGTCACGATACAGCGCCGGGTTAGCCAGCTTTTGCGCCCGGCGGTGCGCTGGCTCCAGCGGCCGTCGCA
AATTAAAGCGCGCCCACGCCGCTCCAGCGGGCGCGTTATATTTCA---G--TTTTTTTA--CTATGATTCGATACATATT
TGGGTTCGTAGATA--ATTCTCCTACTACTACTACTCGTTCGACTCGGACTTTATCTCAGTGATGTCCTTCTCCGACGTC
GGAGCGTAGGCATCAAGGAACCGCTCGTCGCCGGAGTTTCAGGAGGACGCATCTCCAAGCGCTTGGTTGTATTTAGCGAC
CGCCTTCCGCGTTCGCTTGTCCTCGCGATAGTCGGCTCGCTCCTCCCTTCTTTTCGCCCTT---------CTCTGGGTGA
AAAACTGTTTCTCGTTGG---TGTCTTCCGAGAAGCGATGGCTCCACAGCGCCATGGCTTGCTCGTCCATCTCGGCCAGT
CTGAGACGATGCTCCCGCCTCTGGTGCTTGCGACGATCCTCGTCGGTGAGAAGCCGCGGGAAAGACGCCAACTCCTGTGC
GCGCTCCCGCGTCGCCACGTCGGCGAAGTTCATGTCCTGACGGGACCGCAGGAGGCGCCACGCCGCAGCGTCGTACGCGC
AGGCACCCTCCCGGGCGGTGTCGACGGTTCCGAGACGGAGCCGCATGCCGTCG-CCC---GACCGGATCTCGGCGGAGTA
GGTGCCGGACGGACGCACGCGGACGCTGCGGTAGCCCATACCTCCCCGGCGGCGAGGCGGCATGGTGGCGTGTCGGTGGC
-----
>chr5D_2461
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--------------------------------------------------------------------------ACGCGC
CGCGCGCTAAAAATCACGATACAGCGCCGGGTTAGGCAGCTTTTGCGCGCGGCGGTGCGCTGGCTCCAGCGGCCGCCACA
AATTAAAGCGCGCCCACGCCGCTCCAGCAGGCGCGCTATATTTCA---G-TTTTTTCTA--CTACGATTCGATACATATT
TGATTTCGTAGATA--GTTCTCCTAC---TACTACTCGTCCAACTCGGACTCTGTCTCAGTGATGTCCTTCTCCGACGTC
GGAGCGTAGGCGTCAAGGAACCGCTCGTCGCCGGAGTTCCAGGAGGACGCATCTCCTAGCGCTTGGTTGTATTTAGCGAC
CGCCTTCCGCGTTCGCTTGTCCTCGCGATAGGCGGCTCGCTCCTCCCTCCTCTTCGCTCTCTCCGCCCTCCTCTCGGCGA
AGAACTGTTCCTCGTTGATGATGTCGTGCGGGAAGCAATGGCTCCACAGCGCCATGGCTTGCTTGTCCATCTCGGCCAGC
CTGAGACGATGCTGCCGCCTCCGGTGCTTGCGATGATCCTCTTCAGTGAGAAGCCGTGGGAAAGACGCCAACTCCTGTGC
GCGCTCCCGTGTCGCTACGTCGGCGAAGTTCGTGTCCTGACGGGACCGCAGGAAGCGCCACGCCGCAGCGTCGTACGCGT
GGGCGCCCTCCTGGGCGGTGTCGAAGGTTCCGAGATGGAGCCGCATGCCGCCG-CCC---GACCGAATCTCTGTGCAGTA
GGTGCCGCACAGAAGCACGCGGACGCCGCGGTAGCCCGTACCTCCCCGGCGGCGAGGCGGCATGGTGGCGCG--------
-----
>SNPs
S-S---S-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----------S--S-S-SSSS-SS--------
--------------------------S------S--S---SS--S--SSSSSSSSSSSSSSSS------------S----
------------S-------------------------------------------------------------------
-------------------------------------------------------S-------S--S---S-SS------
-------------S----------------SSSSSS--------------------------------------------
------------------S---------------S-------------------------S-------------------
-S--------------------------------------------S----------------S------S---------
-----------------------------------------S--------------------S-----------------
-------------------S-----S------------------------------------------------------
----------S---------------------------------------------------------------------
------------------------------------------------------S------------------S------
----S----------S----------------------------------S------------------S----------
-----------------------------------------------------------S--------------------
--------------------------S--------S-------------------------------------S------
-------------S--------------S------------S-S-S--------S-------------------------
--------------S---------------------------S-------------------------S-----------
-------------------S--------------S---------------------------S-----------------
-----S-----------------------S-SSSSSSSSSSS-------------S--S-----S-----S---------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S----------S--------
-S---------------------------------S-------S---------------------S---S----------
---------------------S---------S------------------S-----------------------------
---S-----S-S----------------S--S------------------------------------------------
-----------------S-----------------------S--S-----------------------------------
-S---------------------S-------------------------------S------------------------
----------------------------S---------------------------------------------------
------------------S------------S-----------S------------------------------------
S-----------------------------------------------------------------------------S-
---S----------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----S
>forward_71
---------------------------------------------------GATAAGGCGAGAGTGGGTCG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----
>reverse_1219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GTTCTCCGAGGCATCAGTGT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>forward_565
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GGAGAGATCAGCGAT
GGTGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
>reverse_2297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AAAGAAGAAGGAGGCTCGCC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----
