>input_sequence_56214
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--------------------------------------------------------------------ATGGGGAAGAGC
GACTTCCTGACGCCCAAGGCGATCGCGAACCGGATCAAGGCCAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTG
CCAGAAGCAGTGCCGCGACGAGAACGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGGCAGATGGCCATCTTCG
GCCAGGCCCCCGACCGCGTCGTCGAGGGCTTCTCCGACGAGTTCCTCGAGGAGTTCCTCACCCTGCTCCGCCGCGCCCAC
CGCAGCTCCCGCGTCGCCGCCACCGTCATCTACAACGAGTTCATCGCCGACCGCCACCACGTGCACATGAACTCCACCCG
CTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGCCGCGAGGGCCACGCCAAGGTCGAGGACACGCCCAAGGGATGGT
TCATCACCTACATCGACCGCGACTCGGAGCAGGCCATCAAGGCCAGGCTCAAGCGCAAGAGGGTCAAGTCCGACCTCGCC
GAGGACGAGCGGCAGGAGCTCATGATTGCCCGGCAGATCGAGCGCGCCCAGAA---A------GCCCAGGCTAATGGCGA
AGACGCTGATGATGCTAGTGCTGATGATGACCTCGGCAGCGAGGATGATGAGTATTCGGGATCAGACGAGGATGATCAGG
AAG---------AACAACAGGAGGATGGCAAAGAGGCCAACAAGCCAACTGGGAAGATTGCGATTGCACTCCAGCGGGCT
GCGCCGCCACCTAAGGTTAATCCTTTTGATGATAAGCCAAAGATGAAATTTGGCTTCGAGGAGGAAGAGGAGGAGGTGCC
CAACAAGAAGGCGAAAGTTGCAGGGAAGGCAACGGACACCAGGAGGTCGGCGATCGATGATCTGATGAAGGAGGAGGAGA
AGGCCAAGGAGCGGAGCAACCGGAAGGACTACTGGCTGTGCCCTGGTATCGTTGTCAAGGTGATGAGCAAGTCGCTGGCC
GAGAAGGGG------TACTACAAGCAGAAGGGATTGGTGAAGAGGGTGATTGATAAGTATGTCGGGGAGATTGAGATGCT
GGAGAGCAAGCATGTTCTCAGGGTCGACCAGGATGAGCTTGAGACTGTCCTCCCACAGATTGGTGGGCTGGTGCGGATTG
TTAACGGGGCTTACCGGGGCTCGAATGCAAGGCTGCTCTCAGTGGACACAGAGAGATTCTCCGCCAAACTGCAGGTTGAA
AAGGGCCTCTATGATGGGAAAGTTCTCAAGGCTATTGAGTATGAGGACATTTGCAAGGTTGCTC---AGTGA--------
--------------------------------------------------------------------------------
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----------------------------------------
>chr6D_1_TraesCS6D01G104600
TAAATTTTTAGGTCATTTGGAGCCGTGGAGAATATCTATCTCTGATGTAGCTTTTTCAGTTCCAGAATTCTTGTTGCCGG
TAATCTCCCTCTTCTTGTGAAACTTGCAAATTAAGATAGAAAATGCATTATAATTGCATCATAAAGTGAAATAACAACCC
AGAACATAATAAATAACAGTACGGAAACATAATGCAAAATTGACGTATCATCCTTCCATCAGATTCATAGCTCAGGCAAC
CGATGGAGCCCGGTGCCACCCTTCGGCAGCGGGCGTAGCTCTCCTTATTGGGTGGTAGTTTCGACCAACGATCTGACTTT
CTCATATCCGGATCCTCACTTGGTGGCATATTGCTTGAAATTTAGGTCAGGGCAAAAATCCCTGCTCGGTTTGCCGATGC
TTGCA-ACAGCGACACCCAGGGGGTGTCGTCCCCTTCTTGGAGGCGCTGTCATGACCTATATCTG-GCCCTTTTCCATCA
TCCGGGGAGCCCTAGGTCCGGCTTGTTGGACCGGACGGTGACAAGGCCACAATATCATTTTCTTTTTACAAAGGCACTGT
GTTGTTTCTTGGCGGCGTTCTCGTTTTTGAATTTGGAGATGTTAATC---------ATTGTGGTTGTTTCTTACGGATCG
TTGAACCCATTCTATATTTTT-CTATCAATGCAAATATTTTTTTCGAAAAAATACACCAGCTTTGCGTACTCGTCAAAAA
AGGTTGTATACATGTCCGAGTTGTATACGTGTTAGCCACCGTGTCAGATTGGGTACGTGCTGGTTTGCTAATAAGTCCTC
GAGATCCCCACGTCTCCAAACCGACTCCACAGTCCAATCCCCAATCCCTAGTCCACCGCTTGCCTGCCCTCGCGGATCTC
TCCGGCCGTCAACCACCGCCGCCGCCCGCCGACCAACCCAAACCCCGCGCCCCCACTCGCCGCGCGCTCCTCCCAGCCCC
TCGCAAACCCCCT--CCCTCCCCTCCGCACGTTC---CCGGCG---------GCGCCGGC--GGCGCGATGGGGAAGAGC
GACTTCCTGACGCCCAAGGCGATCGCGAACCGGATCAAGGCCAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTG
CCAGAAGCAGTGCCGCGACGAGAACGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGGCAGATGGCCATCTTCG
GCCAGGCCCCCGACCGCGTCGTCGAGGGCTTCTCCGACGAGTTCCTCGAGGAGTTCCTCACCCTGCTCCGCCGCGCCCAC
CGCAGCTCCCGCGTCGCCGCCACCGTCATCTACAACGAGTTCATCGCCGACCGCCACCACGTGCACATGAACTCCACCCG
CTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGCCGCGAGGGCCACGCCAAGGTCGAGGACACGCCCAAGGGATGGT
TCATCACCTACATCGACCGCGACTCGGAGCAGGCCATCAAGGCCAGGCTCAAGCGCAAGAGGGTCAAGTCCGACCTCGCC
GAGGACGAGCGGCAGGAGCTCATGATTGCCCGGCAGATCGAGCGCGCCCAGAA---A------GCCCAGGCTAATGGCGA
AGACGCTGATGATGCTAGTGCTGATGATGACCTCGGCAGCGAGGATGATGAGTATTCGGGATCAGACGAGGATGATCAGG
AAG---------AACAACAGGAGGATGGCAAAGAGGCCAACAAGCCAACTGGGAAGATTGCGATTGCACTCCAGCGGGCT
GCGCCGCCACCTAAGGTTAATCCTTTTGATGATAAGCCAAAGATGAAATTTGGCTTCGAGGAGGAAGAGGAGGAGGTGCC
CAACAAGAAGGCGAAAGTTGCAGGGAAGGCAACGGACACCAGGAGGTCGGCGATCGATGATCTGATGAAGGAGGAGGAGA
AGGCCAAGGAGCGGAGCAACCGGAAGGACTACTGGCTGTGCCCTGGTATCGTTGTCAAGGTGATGAGCAAGTCGCTGGCC
GAGAAGGGG------TACTACAAGCAGAAGGGATTGGTGAAGAGGGTGATTGATAAGTATGTCGGGGAGATTGAGATGCT
GGAGAGCAAGCATGTTCTCAGGGTCGACCAGGATGAGCTTGAGACTGTCCTCCCACAGATTGGTGGGCTGGTGCGGATTG
TTAACGGGGCTTACCGGGGCTCGAATGCAAGGCTGCTCTCAGTGGACACAGAGAGATTCTCCGCCAAACTGCAGGTTGAA
AAGGGCCTCTATGATGGGAAAGTTCTCAAGGCTATTGAGTATGAGGACATTTGCAAGGTTGCTC---AGTGAGATAGGAT
GGAGTCTCATTTCAATTCCAGAAGCAATTCCAGCGGCATTTGCAAGGTTGCTTAGTGAAATGGAGTTATGGACCCAATGT
ACTAGCTCTGTCTGTCTTCCTGACAATGTATGTGCAACTATGCTTGTGCTAGAATGTTGTCTATCTAAGAAGTTTGAGGT
GTC--TATTTCTAGTTCATTCTTGCTGCTGAAAGTACACTGCAAAAAGATCATCTGATATTTGTTCGCCTTCTGCTTGGT
GGCTAGAATAATATGACAATTTTGCAACACTTGCTCAACTTCTTCATATTTGTTTACAGTCAATCTTGTTACCAGTTTTT
AGTTGTATACTATTGGTAATCTGAGACATTCTGGACTGGAAATATCATTGCGGTGCTTCTTGCTTCGGACAGTTAACAAT
TTCTGGACTGGAAATATCATTGTGGTGCTTCTTGCTTCCGACAGTTAACAATTGTGCATCCTCTGCTTTTACCGTATGAC
TTCTACCTTAAGAAAGCTGGAAAAAAGGCACTCCATGTGATTGATTAAGTTTGCTGCATAGTTTTTGTGCTCTGGCTTTG
TCATCTTACTATAAGTATTCCTTCCAAAAAATATTATACATGTGGAAATGCCAATCACACTGGAGAGCTCTATCATGATT
GTTCAGGCAGCCCCACCTGAATTGTTTGTACCTTAAATCTCT--TACCAATTAAAGTAGTGATCTAAACACTCTTATATT
TCTTTACGGAGGGAGTACCAATATACTGTTCTGTTTTCAATGGCAGTGAGACACTTTCACCTTGTCCATCTTCCCAGCCT
AAAGAAACTCATCCAAGTT-AACTTTGTTACCTTAATTCTGTCCACCTTAATAAATCTTCTTCAGCTTCCTTTATAACAT
---ATGGAATATAACAGGATATCCAAGAAGCTGCTTTTGACATAGATTGCTTCCATTCGACTGCTGTATGTGCTTTTTAT
CTGATAATAACTCAGTTCAAACTTGCCACATGACAAATCA
>chr6B_84
--------------------------------------------------------------------------------
---TCTCCCTCTTCATGTGAAACTTGCAAATTAAGATAGAAAATGCATTAGAATTGCATCATAAAGTGAAATAACAACCC
AGAACATAATAAATAACAATACGAAAACATAATGCAAAATTGACGTATCATTCTCCGATCAGATTCATAGCTCAGGCAAC
CGATGGAGCCCGGTGCCACCCTTCGGCAGCGCGCGTAGCTCTCCTTCCTGGGTGGTAGTTTCGACCAACGACCTGACTTT
CTCATCTCCGGATCCTCATTTGGTGGCATATTGCTTGAAATTTAGGCCGGGGCAAAAATCCCTGCTCGGTTTGCCGATGC
TTGCAAACAGCGACACCCAGG-GGTGTCGTCCCCTTCTTGGAGGCGCTGTCATGACCTATATTTGTGCACTTTTCCATCA
TCCGGGGAGCCCTAGGTCCGGCTTGTTGGACCGGACGGCGACAACGCCATAATATCCTTTTCTTTTTACAGAGGCACTGT
GTTGTTTCTTGGCGGCGTTCTCGTCCTTGAATTTGGAGATGTTAATCGTCGTGTTGGTTCAGGTTGTTTCTTACGGATCG
TTGAACCCATTCTATATTTTTTCAATCAATGAAAATATTTTCTGG--AAAAATGCACAAACTTTGCGTATTCGTGAAAAA
AAATTGTATGCATGTCCGAGTCGTATACGCGTTAGCCACCGTGTCAGATTGGGTACGTGCTGGTTTGCTAATAAGTCCTC
GAGATCCCCACGTCTCCAAACCGACTCCACAGTCCAATCCCCAATCCCTAATCCACCGCTTCCCTGCCCTCTCGGATCTC
TCCGGCCGTCAACCACCGCTGCCGCCCGCCGACCAACCCAAACCCCGCGTCCCCACTCGCCGCGCGCCCCTCCAAGCCCC
TCGCAAA-CCCCT--CCCTCCCCTCCGCACGTTC---CCGGCG---------GCGCAGGC--GGCGCGATGGGGAAGAGC
GACTTCCTGACGCCGAAGGCGATCGCGAACCGGATCAAGGCCAAGGGGCTGCAGAAGCTCCGGTGGTACTGCCAGATGTG
CCAGAAGCAGTGCCGCGACGAGAACGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGGCAGATGGCCATCTTCG
GCCAGGCCCCCGACCGCGTCGTCGAGGGCTTCTCCGACGAGTTCCTCGAGGAGTTCCTCACCCTGCTCCGCCGCGCCCAC
CGCAGCTCCCGCGTCGCCGCCACCGTCATCTACAACGAGTTCATCGCCGACCGCCACCACGTGCACATGAACTCCACCCG
CTGGGCCACTCTCACCGAGTTCGTCAAGTTCCTCGGCCGCGAGGGCCACGCCAAGGTCGAGGACACGCCCAAGGGCTGGT
TCATCACCTACATCGACCGCGACTCGGAGCAGGCCATCAAGGCCAGGCTCAAGCGCAAGAGGGTCAAGTCCGACCTTGCC
GAGGACGAGCGGCAGGAGCTCATGATTGCCCGGCAGATCGAGCGCGCCCAGAA---A------GCGCAGGCTAATGGCGA
AGAAGACGATGATGCTAGTGCTGATGATGACCTCGGCAGCGATGATGATGAGTATTCGGGATCAGACGAGGATGATCAGG
AGG---------AACATCAGGAGGATGGGAAAGAGGCCAACAAGCCAACTGGGAAGATTGCGATTGCGCTCCAGCGGGCT
GCGCCGCCGCCTAAGATTAATCCTTTTGATGATAAGCCAAAGATGAAATTTGGCTTCGAGGAGGAAGAGGAGGTGGTGCC
CAACAAGAAGGCGAAAGTTGCAGGGAAGGCAACGGACACCAGGAGGTCGGCGATCGATGATCTGATGAAGGAGGAGGAGA
AGGCCAAGGAGCGGAGCAACCGGAAGGACTACTGGCTGTGCCCTGGTATCGTTGTCAAGGTGATGAGCAAGTCGCTGGCC
GAAAAGGGG------TACTACAAGCAGAAGGGATTGGTGAAGAGGGTGATTGATAAGTATGTCGGGGAGATTGAGATGCT
GGAGAGCAAGCATGTTCTCAGGGTCGACCAAGATGAGCTTGAGACTGTCCTCCCGCAGATTGGCGGGCTGGTGCGGATTG
TTAACGGGGCTTACCGGGGCTCCAATGCAAGGTTGCTCTCAGTGGACACGGAGAGATTCTCTGCCAAACTGCAGGTTGAG
AAGGGTCTCTATGATGGGAAAGTTCTCAAGGCCATTGAGTATGAGGACATTTGCAAGGTTGCTC---AGTGAGATAGGAT
GGAGTCTCATTTGAATTCCAGAAGCAATTCCAGCAGCATTTGCAAGGTTGCTTAGTGAAATGGAGTTATGGACCCAATGT
ACTAGCTCTGTCTGTCTTCCTGGCAGTGTATGTGAAACTATGCTTGTGCTAGAATGTTGTCTATCTAAGAAGTTTAAGGT
GTTGATGTTTCTAGTTCATTCTTGCTGCTGAAAGTACACTGCAAAAAGATCATCTGATATTTGTTCGTCTTCTGCTTGGT
CGCTAGAATAATATGACAATTTTGCAACACTTGCTCAACTTCTTCATATTTGTTTACAGTCAATCTTGGTACCAGTTTTT
AGTTGTATAGTATTGGTAATCTGAGACATTCTGGACTGGAAATATCAGTGCGGTGCTTCTTGCTTCGGACAGTTAACAAT
TTCTGGACTGGAAATATCATTGTGGTGCTTCTTGCTTCCGACAGTTAACAATTGTGCATCCTCTGCTTT-----TATGAC
TTCTACCTTAAGAAAGCTGAAAAAAAGGCACTCCATGTAATTGATTAAGTTTGCTGCATAGTTTTTGTGCTCTGGCTTTG
TCATCTTACTACAAGTATTCCTT-AAAAAAATAGTATACATGTGGAAATGCCAATCACACTGGAGAGCTCTATCATGATT
GTTCAGGCAGCCCCACCTGAATTGTTTGTACTTTAAATCTCT--TACCAATTAAAGTAGTGATCTAAACACTCTTATATT
TCTTTACGGAGGGAGTACCAATATACTGTTCTGTTTTCAATGGCAGTGAGACACTTTTACCTTGTCCATCTTCCCAGCCT
AAAGAAACTCATCCAAGTTCAACTTTGTTACCTTAATTCTGTCCACCTTAATAAATCTTCTTCAGCTTTCTTTATAACAT
AATATGGAATATAACAGGATATCCAAGAAGCTGCTTTTGACATAGATTGCTTCCATTCGACTGCTGTATGTGCTTTTTAT
CTG---ATAACTTAGTTCAAACTTGCCACATGACAAATCA
>chr6A_396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GATGC
TTGC-AACAATGACACCTAGG-GGTGTCGTCTCCTTCTTGGAGGCGCTGTCATGACCTATATCTGTGCCCTTTTGCATCA
TCCGGGTAGCCCTAGGTCCAGCTTGTTGGACTGGACGGCGACAACGCCACAATATCATTTTCTTTTTACAAAGGCACTGT
GTAGTTTCTTGGCGGCGTTCTCGTTCTTGAATTTGGAGATGTTGATCGTCGTGTTGATTCAGGTTGTTTCTCATGGATCG
TTGAACTCATTCTATACTTTTTCTATCAATGAAAATACTTTTTGA-AAAAAATACATAAACTTTGCGTATTTGTGAAAAA
AA-TTGTATACATGTCCGAGTTGTATACGTGTTAGCCACCGTGTCAGAGTGGGTACGTGCTGGTTTGCTAATAAGTCCTC
GAGATCCCCACGTCTCCAAACCGACTCCACAGTCCAATCCCCAATCCCTAATCCACCGCTTGCCTGCCCTCGCGGATCTC
TCCGGCCGCCAACCACCGCCGCCGCCCGCCGACCGACCCAAACCCGGCGCCCCCACTCGCCGCGCGCCGCTCCCAGCCCC
TCGCAAA-CCCACTCCCCTCCCCTCCGCACGTTC---CCGGCGGCGCCGGCGGCGCAGGC--GGCGCGATGGGGAAGAGC
GACTTCCTGACGCCCAAGGCGATCGCGAACCGGATCAAGGCCAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTG
CCAGAAGCAGTGCCGCGACGAGAACGGCTTCAAGTGCCACTGCATGTCGGAGTCGCACCAGCGGCAGATGGCCATCTTCG
GCCAGGCCCCCGACCGCGTCGTCGAGGGCTTCTCCGACGAGTTCCTCGAGGAGTTCCTCACCCTGCTCCGCCGCGCCCAC
CGCAGCTCCCGCGTCGCCGCCACCGTCATCTACAACGAGTTCATCGCCGACCGCCACCACGTGCACATGAACTCCACCCG
CTGGGCCACGCTCACCGAGTTCGTCAAGTTCCTCGGCCGCGAGGGCCACGCCAAAGTCGAGGACACGCCCAAGGGCTGGT
TCATCACCTACATCGACCGCGACTCGGAGCAGGCCATCAAGGCCAGGCTCAAGCGCAAGAGGGTCAAGTCCGACCTCGCC
GAGGACGAGCGCCAGGAGCTCATGATTGCCCGTCAGATCGAGCGTGCACAGAA---A------GCCCAGGCTAATGGCGA
AGAAGACGATGATGCTAATGCTGATGATGACCTCGGCAGCGAGGATGATGAGTATTCGGGATCAGACGAGGATGATCAGG
AAG---------AACATCAGGAGGAGGGGAAAGAGGCCAATAAGCCAACTGGGAAGATTGCCATTGCGCTCCAGCGGGCT
GTGCCGCCGCCTAAGATTAATCCTTTTGATGATAAGCCAAAGATGAAATTTGGCTTCGAGGAGGAAGAGGAGGAGGTGCC
CAACAAGAAGGCGAAAGTTGCAGGGAAGGCAACGGACACCAGGAGGTCGGCAATTGATGATCTGATGAAGGAGGAGGAGA
AGGCCAAGGAGCGGAGCAACCGGAAGGACTACTGGCTGTGCCCTGGTATCGTTGTCAAGGTGATGAGCAAGTCGCTGGCC
GAGAAGGGG------TACTACAAGCAGAAGGGATTGGTGAAGAGGGTGATTGATAAGTATGTCGGGGAGATTGAGATGCT
GGAGAGCAAGCATGTTCTCAGGGTCGACCAGGATGAGCTTGAGACTGTCCTCCCGCAGATTGGTGGGCTGGTGCGGATTG
TTAACGGGGCTTACCGGGGCTCGAATGCAAGGCTGCTCTCAGTGGACACAGAGAGATTCTCCGCCAAACTGCAGGTTGAA
AAGGGCCTCTATGATGGGAAAGTTCTCAAGGCTATTGAGTATGAGGACATTTGCAAGGTTGCTC---AGTGAGATAGGAT
GGAGTCTCATTTCAATTCCAGAAGCAATTCCAGCGGCATTTGCAAGGTTGCTTAGTGAAATGGAGTTATGGACCCAATGT
ACTAGCTCTGTCTGTCTTCCTGGCAATGTATGTGCAACTATGCTTGTGCTAGAATGTTGTCTATCTAAGAAGTTTGAGGT
GTCGATATTTCTAGTTCATTCTTGCTGCTGAAAGTGCACTGCAAAAAGATCATCTGATATTTGTTCGCCTTCTGCTTGGT
GGCTAGAATAATATGACAATTTTGCAACACTTGCTCAACTTCTTCATATTTGTTTACAGTCAATCTTGTTACCAGTTTTT
AGTTGTATAGTATTGGTAATATGAGACATTCTGGACTGGAAATATCATTGCGGCGCTTCTTGCTTCGGACAGTTAACAAT
TTCTGGACTGGAAATATCATTGTGGCGCTTCTTGCTTCCGACAGTTAACAATTGTGCATCCTCTGCTTTTACCGTATGAC
TTCTACCTTAAGAAAGCTGACAAAAAGGCACTCCATGTAATTGATTAAGTTTGCTGCATAGTTTTTGTGCTCTGGCTTTG
TCATCTTACTATAAGTATTCCTT-CAAAAAATAGTATACATGTGGAAATGCCAATCACACTGGAGAGCTCTATCATGATT
GTTCAGGCAGCCCCACCTGAATTGTTTGTACCTTAAATCTCTTATACCAATTAAAGTAGTGATCTAAACACTCTTACATT
TCTTTACGGAGGGAGTACCAATATACTGTTCTGTTTTCAATGGCAGTGAGACACTTTTACCTTGTCCATCTTCCCAGTCT
AAAGAAACTCATCCAAGTT-AACTTTGTTACCTTAATTCTGTCCACCTTAACAAATCTTCTTCAGCTTCCTTTATAACAT
---ATGGAATATAACAGGATATCCAAGAAGCTGCTTTTGACATAGATTGCTTCCATTCAATTGCTGTATGTGCTTTTTAT
CTG---ATAACTCAGTTCAAACTTGCCACATGACAAATCA
>chr3B_963
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----------------CCTCCCCTTCGCACGACGTATCCGGCG---------GCGCGGCGCAGGCGCGATGGGGAAGAGC
GA---------GCTGAAGGCCATGGCGAACCGGGCGAAGGCCAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTG
CGAGAAGCAGTGCCGCGACGAGAACGGCTTCAAGTGCCACTGCTCGTCCGAGTCGCACCAGCGGCAGATGGCCGTCTTCG
GCCAGGCCCCCGACCGCGCCGTCGACCGCTTCTCCGGCAAGTTCCTCGACGCGTTCCTCGCCCTCCTCCGCCACGGCCAC
CGCGGCTCCCGCGTCGCCGCCACCGTCGTCTACAATGAGCTCGTCGCCGACCGCCGCCACGTGCACATGAACTCCACGCG
CTGGGCCACGCTCTCCGAGTTCGTCGAGTTCCTCGGGGGCGAGGGGCTCGCCAAGGTCGAGCACACGCCCAAGGGCTGGT
TCATCGCCTACATCGACGGGGACTGTGAGCAGGCCGTCAAGGCCGGGCTCAAGCGCAAGAGGGTCCTGTCCGA-------
--------------GGAGCTCGTGATTGCCCGGCAGATTGAGCGTGCCCAGAA---ATCCATGGCCAAGGCTAATGGCGA
TGACAATGGCGACCTCGGGAAGAGC------------------GAGGATGAGTATTCGGGATCAGGGGACGCTGATCAAG
AACGACAAGGACAACGACAGGAGGATGCCAAAGAGATCAACAAGGCAACGGGAAAGGTTGCGATCGCACTCCGGCGCGCC
GCTCCGGCAATGCC------------TGAGGTTAAGCCAGAGATGAAATTTGGCTTGGATGAAGAGGAGGAGGAGGCGAC
---CAACAAGGGGAGAGACGCAGGGAAAGCAAGGGACACGAGGAGGTCGGCCATTGATGATCTGATG---GAGGAGGAGA
AGGCCAAGGAGCGGAGCAACCGGAAGGACTACTGGCTGTGCCCTGGCATAGTTGTCAAGGTGATGAGCAAATCACTGGCT
GAGAAGGGGCACCACTACTACAAGCACAAGGGGCTGGTGAAGAGGGTGATAGACAGGTACGTCGGCGAGATCGAGATGCT
GGAGAGCAAGCATGTCGTCAGGGTCGACCAAGATGAGCTCGAGACCGTCATCCCGCAGATCGGCCGCCTGGTACGTGTCG
TCAATGGCGCCTACCGGGGGTCGAACGCGAGGCTGCTCTCGGTGGACACGGAGAGGTTCTCTGCCAGACTGCAGGTTGAG
AAGGGCCTCTATGATGGGAGAATTCTCGAGGCCGTCGAGTATGAGGACATCTGCAAGGTTGCT-----------------
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----------------------------------------
>chr3D_963
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----------------CCTCCCCTTCGCACGACGTATCCGGCG---------GCGCAGCGCAGGCGCGATGGGGAAGAGC
GA---------GCTGAAGGCCATGGCGAACCGGGCGAAGGCCAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGATGTG
CGAGAAGCAGTGCCGCGACGAGAACGGCTTCAGGTGCCACTGCTCGTCGGAGTCGCACCGGCGGCAGATGGCCGTGTTCG
GCCAGGCCCCCGGCCGCGCCGTCGAGCGCTTCTCCGGCGAGTTCCTCGAGGCGTTCCTCGCGCTGCTCCGCCACGGCCAC
CGCGGCTCCCGCGTCGCCGCCACCGTCGTCTACAGCGAGCTCGTCGCCGACCGCCGCCACGTGCACATGAACTCCACGCG
CTGGGCCACGCTCACGGAGTTCGTCGAGCTCCTCGGGCGCCAGGGCCTCGCCAGGGTCGAGCACACGCCCAAGGGCTGGT
TCGTCGCCTACATCGACAGGGGCTATGAGCAGGCCGCCAAGGCCGGGCTCAAGCGCAAGAGGG-----------------
--------------------------------------------------------------------------------
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>chr3A_980
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------C---CCGGCG---------GCGCAGCGCAGGCGGGATGGGGAAGAGC
GA---------GCTGAAGGCAATGGCGAGCCGGATGAAGG-CAAGGGGCTGCAGAAGCTGCGGTGGTACTGCCAGGTGTG
CGAGAAGCAGTGCCGCGACGAGAACGGCTTCGAGTGCCACTGCTCGTCGGAGTCGCACCGGCGGCAGATGGCCGTCTTCG
GCCAGGCCCCCGACCGCGCCAACGAGCGCTTCTCCGGCGAGTTCCTCGAGGCGTTCCTCGCCCTGCTCCGCCACGGCCAC
CGCGGCTCCCGCGTCGCCGCCACCGTCGTCTACAACGAGCTCGTCGCCGACCGCCGCCACGTGCACATGAACTCCACGCG
CTGGGCCACGCTCTCCGAGTTCGTCCAGTTCCTCGGCCGCCAGGGCCTCGCCAGGGTCGAGCACACGCCCAAGGGCTGGT
TCATCGCCTACGTCGACAGGGGCTCCGAGCAGGCCGCCAAGGCCGGGCTCAAGCGCAAGAGGGTCCAGTCCGA-------
--------------GGAGCTCGTCATTGCCCGGCAGATCGAGCGTGCCCAGAAGAAATCCATGGCCGAGGCCAATGGTGA
TGACAATGGCGACCTCGGGAAGAT------------------TGAGGAAGCGTATTCGGAACAAGTCGATGCTGATCAAG
------------------------------AAGAGTTCAACAAGGCAACCGGGAAGGTTGCGATCGCACTCCGGCGCGCT
GCTCCGGCAACGCC------------TGAGGTTAAGCCAGAGATGAAATTTGGCTTGGATGAAGAGGAGGAGGAGGTGAT
CAACAACAAGGGGAAAGACGCAGGGAAATCAACGGGTACGAGGAGGTCAGCCATTGATGATCTGATGGAGGAGGAGGCGA
AGGCCAAGGAGCGGAGCAACCGGAAGGACCACTGGCTGTGCCCCGGCATCGTGGTCAAGGTGATGAGCAAATCACTAGCC
GAGAAGGGGCACCATTACTACAAGCACAAGGGACTGGTGAAGAGGGTGATAGACAGGTACGTCGGGGAGATCGAGATGCT
GGAGAGCAATCATGTCGTCAGGGTCGACCAAGATGAGCTTGAGACCGTCGTCCCGCGGATCGGCGGGCTTGTGCGGATCG
TCAATGGCGCCTACCGGGGATCGAACGCGAGGTTGCTCTCGGTGGACACGGAGAAGTTCTCCGCCAAACTGCGGGTTGAG
AAGGGCCTCTATGATGGGAGAGTTCTCGAGGCTGTCGAGTACGAGGACATCTGCAAGATTGCTGATTAGTGTGATAGGGT
AGAGTTTCATTTCA------------------------------------------------------------------
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----------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------S-----------------------------------S-----------------------------
------------------S----S---------------------------S--S-S-----------------------
-------------------------------S--------------SS-----------------------S--------
-----S------------S---------------------------S-S-------------------------------
---------------------S----------------------------------------------------------
--------------------------------------S-----S-----------------------------------
-------------------------S---------------------------------SS-------------------
-------------------------------S-----------SSS-----------S-S---------S----S-----
-SS-----------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------------------------S------------
-------S------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------S-------------------------
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----------------------S---------------------------------------------------------
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---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------S-----------------------------------------
-----------------------S---------S----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SSS----------------------------------
>forward_31
-----------GTCATTTGGAGCCGTGGAGA-------------------------------------------------
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>reverse_1606
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-----CTGATGATGCTAGTGCTGATGA-----------------------------------------------------
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>forward_715
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-------------------------------------------------------ACCAGCTTTGCGTACTCGTC-----
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>reverse_2135
--------------------------------------------------------------------------------
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------------------------------------------------------ACAGATTGGTGGGCTGGTG-------
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----------------------------------------
>forward_851
--------------------------------------------------------------------------------
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-----------------------------CAGTCCAATCCCCAATCCCTAG-----------------------------
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----------------------------------------
>reverse_2650
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---------CTATTGGTAATCTGAGACATTCTGGAC--------------------------------------------
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----------------------------------------
