>input_sequence_56105
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--------------------------------------------------------ATGGGAAGACGGCCGGATAGGTCG
CTAGGGGCATCGGCGTGTTGCAAGCGAGTGGTGGCCGTCATCTTCCTCGTGTGTGTTGCCCTTCTTGTGGTGATGGTGGC
GACGACGAGTGGTGCTGGCGTCGGCTTCGGTCCAGCTCAACCCGGTGGCAGAGTGAGTACGAAGAGCTCCCCGGTGCAGA
AGCCAGGTGGCGGACAAGCCGGCGAGGACGCGTACCGAAGCAGCAAGAGGAGGATTCCCAAGGGGCCAGACCCTATCCAC
AACAGGTAAATTTTGATTGATTCATGTTTGATGCATATGCATGCACATGTTGTTTTCCTTCGCA-GCATGCATTCTGCCT
CTCTACCTGAAATATCTC-CTGTTTTTGGCAAAGTTTATAATTTTCTAGCACATTCATCAAGAAATGGGAGATAGTTTTG
CATCATCAAAATTGAAATGTTTATGACTCTTAACTAGTGGATCAAAATTGATCGACTGAACTGAATAAATGACACGGCCT
GAAATACTCTGCTCCTTGATACTCTGCTCTGTTGTTATTTACAATTACAAGCACTCTGATCATTTGTTTCTCCGGAACAG
ACTCTGCTCAGTTGTCGGCTCTGCTGTCATGCAGTGAACAACAAGCAGAAGTCTAGAGATGATTTGAAAGTTCTGCCGCA
TAAAATAGCAATGAAAAATTTAAACACAGTTCTTATGCTTCTTCTCCCGGTGAAGGCCAC-AGAAATCTGTAGTTCTTGT
TTACGATAAAAATATGTCTGTGTGGATTGTAAGATTTCCAATGAGTTGTTGCAATAAAGAGGTCTTGGTATGGTTTGGCA
TTTCGTGAGCAGAATAATAAAAAGGAACAAAGCAAGCGTACACTCTGAGCCAAGCACATCATTTCCGAAGTCGCTTTACT
GACAAGAAGAGTGCCAGTGGTGCATACTTCATTCCCATTAGGGACACCTAAGATTCCATTACTAGAACCTTATCTCCCTG
CTTTTGATGATTTACCTAGGGAAACTAAAATCAGGCAGCACACCTAGATGATTGGGCAATGTGGTTTGCACAAATGTAGC
CTCATCAGAAAATAACTGAATATCTCAGTGGGTCTCACAGATAACTGCATGAGAGGGACATAAGCTGTAAACTAAACAAA
ATTAAGTAGCCCACTAACTAATCGGCATCTTCTGTTTTGGTTGCCACCTCCAAGTCTGATAGAACTGTGCTTTCAGGCGT
GCCGGGAAGACCACGATTGCGCCACGCCGGAGAGACTAG-----------------------------------------
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>chr1A_1_TraesCS1A01G323700
CGACAATGAGGCACATGTGGTGACTTCGTCAATCCCAAAATATTGTGTCGGCTTAGTATCTCAGATGCGCTCATATTTAT
GCCGGCTCAATATGTCAGAGGTTCTCATAGAATATGTGTGCATGCGTTTATAGGAATGAGTGTATGCGCGTATACATGAG
CATTAGCATTTGTATATATATTGTATAAATAATCT-AACCGCACATGTGGTGAGAACAGTCTGGGCGGGCCCACACGTCA
GTGGCATAACGGAAGCGTCCGTCCGTCCGTCCATCTGGAACGGGAAAGAACGAACAGAATCAGATGAAGCGACGTGATTG
CTAGCGAGCGGAGGAAGC--TATAGCCGGCAAGGCGAGTGCAGCGCAGGGGCCCATCGGCTTCCAAAGCTAGCAGCTCGG
AATCAAGCCGGCCACGTTCCCGAACCAGCTCCGCTATCGTCCCCATGCATGGTCCTACAAAAGCGCGGCAGCTGATTTGC
TTTCACCCCGCAAAGAAGAGAGAACAAAGCCACGAAGAAGCAAGAGAAAGCAAAGCAAAGCGAACCGAGCCAAAGCGCCA
CGAGCATCGATCAATGGCCGGAGGAAAAGAGGATTGGGGTTGGGGGATAAGAATGTTTGGCGGGCAGGGATCACAGATTC
CCTCCTCTTCCAAGTCACGTCCGTAAAAAGGCGCATTTCGCGCGATCTAAGTGCGCATTAGACGCGCACTTGTGGTGGTG
ATATGCTTTGGTTA-CCCCCCTTTCCATAACACCATATTTGATCTCGCCTGCCTGCCTTGCCATTGTCACTGTCATTGTC
AT------CATGCAGCTGTGCTCTCCTCCTCTTCTTCTTCTCCCTTCGCTTTTCTCTACTGCTCCCACCAGCTTCATATA
GTGGCCGGTAGCTCAACGACGTCGTTGCTGGGTTCGTTCCGTTCACTGTGTAGAGAGAA----ACAACATTGCCTCCTTG
GGTTCTG--GTGGCGAGGAGGAGAAACTTCAGAAGCAGAGGAGGGCCTCTCTCTATATGGGAAGACGGCCGGATAGGTCG
CTAGGGGCATCGGCGTGTTGCAAGCGAGTGGTGGCCGTCATCTTCCTCGTGTGTGTTGCCCTTCTTGTGGTGATGGTGGC
GACGACGAGTGGTGCTGGCGTCGGCTTCGGTCCAGCTCAACCCGGTGGCAGAGTGAGTACGAAGAGCTCCCCGGTGCAGA
AGCCAGGTGGCGGACAAGCCGGCGAGGACGCGTACCGAAGCAGCAAGAGGAGGATTCCCAAGGGGCCAGACCCTATCCAC
AACAGGTAAATTTTGATTGATTCATGTTTGATGCATATGCATGCACATGTTGTTTTCCTTCGCA-GCATGCATTCTGCCT
CTCTACCTGAAATATCTC-CTGTTTTTGGCAAAGTTTATAATTTTCTAGCACATTCATCAAGAAATGGGAGATAGTTTTG
CATCATCAAAATTGAAATGTTTATGACTCTTAACTAGTGGATCAAAATTGATCGACTGAACTGAATAAATGACACGGCCT
GAAATACTCTGCTCCTTGATACTCTGCTCTGTTGTTATTTACAATTACAAGCACTCTGATCATTTGTTTCTCCGGAACAG
ACTCTGCTCAGTTGTCGGCTCTGCTGTCATGCAGTGAACAACAAGCAGAAGTCTAGAGATGATTTGAAAGTTCTGCCGCA
TAAAATAGCAATGAAAAATTTAAACACAGTTCTTATGCTTCTTCTCCCGGTGAAGGCCAC-AGAAATCTGTAGTTCTTGT
TTACGATAAAAATATGTCTGTGTGGATTGTAAGATTTCCAATGAGTTGTTGCAATAAAGAGGTCTTGGTATGGTTTGGCA
TTTCGTGAGCAGAATAATAAAAAGGAACAAAGCAAGCGTACACTCTGAGCCAAGCACATCATTTCCGAAGTCGCTTTACT
GACAAGAAGAGTGCCAGTGGTGCATACTTCATTCCCATTAGGGACACCTAAGATTCCATTACTAGAACCTTATCTCCCTG
CTTTTGATGATTTACCTAGGGAAACTAAAATCAGGCAGCACACCTAGATGATTGGGCAATGTGGTTTGCACAAATGTAGC
CTCATCAGAAAATAACTGAATATCTCAGTGGGTCTCACAGATAACTGCATGAGAGGGACATAAGCTGTAAACTAAACAAA
ATTAAGTAGCCCACTAACTAATCGGCATCTTCTGTTTTGGTTGCCACCTCCAAGTCTGATAGAACTGTGCTTTCAGGCGT
GCCGGGAAGACCACGATTGCGCCACGCCGGAGAGACTAGTACCGGCGAGATGACGACCACCCACCCGGTCTTCTTATCGG
CAAA-------------TGTTGCGACGGGGAAGCT-------------------------TGAGGCGGAGAGATCAGCTC
TCCTACAATGTGGATTTTGGTAGTGGGGGTAATGTACAAAAGTTGCGATCTTCCCGCAAAAAAATCTGTCATTTTTTTGA
CCGAGATTGATCGACCGATCTACCTTTCGCATATCCTTTCGAGATTTCTTTTGAATCCGTGGTGATTTTGCCCAAAT--T
TGTTTCTGTTTGTGTGTGTATTTATCTATC--AGCATGTACGCAGATAAGCAGAGTGCTCTGCTGCGCCAGTAAGTGAAC
CCACTGATGAGCTCACTATATGCCAGTAGCACCTATGTAAATCAAATTTTGTGGTTTGCAATAAGAGCCAAAGATTTGCC
GAAGGGCGTATTTTATGATTTGCGTC-----------------------GCATGTATGGCCGCGTGGCACAGATATGCAT
GGGACATGAATCTTCTTGGCCTGGAAAGCATGAGAGAAATATAACAGGAGAGGCAGAGAAAGAGCTAAAGCTTCGCATCG
ATGCGTACGGCTCGCGTGTGCATGCGGGTGTGAGACTGGTGGTGCTTTTTTCCTTTTACTTCTTTTCTTGCAACCGTGTA
TTTTGAAGTAACCGAGGAGGGAAAGAAGAGGAAAAGAGTAGAAAGGCACGTATGGGCGTGGATGTGCACGTCGTATCGGG
TTCAGTCATTTTTCTTTTTTTGAGG-----GGAACGGGCTCAGGCATTTTGAAGTTTAAAAAAT--ATGAAAACAGCTCG
AATACGACAAATGCTATAAGATGTGGACTTAACATTTTGATGCAAACATATCACAAATTCGCCTGTACAAAGATGAGCTA
AGAGC---------ACTCTCAAACCACACGCAACCGTTCGGACCGTGCGGTCTGGACGTGTTTTGCCATTCAACACGGTC
CAGTATCGGCCCACCGTCGGTCCGGACGCACATTTTCCCGCAAATCGCTTTTGGTTACCCTGGCCCACCTAAAATCCTTC
>chr1B_26
-------------------------TCGTCAATCCCAAAATATTGTGCCGGCTCAGTATCTCGGAGGCGCTCATATTTGT
GTCGGCTCTGTATGTCGGAGGTGCTCATAGAACGTGTGTGCATGCGTTTATAGGGATGAATGTATGCGCGTATATATGAG
CATCGGCATTTGTATTTTGTTTCCATAAATAATCTAAACCGCACGTAAGGTGGGAACAGTCTGGGCGGGCCCACACGTCA
GTGGCATAACGGAAGCGTCCGTCCGTCC----ATCTGGAACGGGAAAGAAAGAACAGAATCAGATGAAGCGACGTGATGG
ATAGCCAGAGGAGGAAAC--TATAGCCGGCAAGGCGAGTGCAGCGCGGGGGCCCATCGGCTTCCAAAGCTAGCAGCTCGG
AATCAAGTCGGACACGTTCCCGAACCAGCTCCGCTCTCGCCCCCATGCATGGTCCTACAAAAGCGCGGCAGCTGATTTGC
TTTCACCCCGCAAAGAAGAGAGAACAAAGCCGCGAAGAAGCAAGAGAAAGCAAAGCAAAGCGAACCGAGCCAAAGCGCCA
CGAGCATCGATCAATGGCCGGAGGAAAAGAAGATTGGGTTTGGGGGATAAGAATGTTTGGCGGGCAGGGATCACAGATTC
CCTCCCCTTCCAAGTCA----CGTAAAAAGGCGCATTTTGCGCGATCTAAGTGCGCATTAGACGCGCACTTGTGGTGGTG
ATATGCTTTGGTTA-CCC-CCTTTCCATAACACCATATTTGATCCCGCCTGCCTGCCTTCCCATTGTCACTGTCATTGTC
ATTGTCATCATGCAGCTGTGCTC---TCCTCTTCTTCTTCTCCCTTTGCTTTTCTCTACTGCTCCCTCCAGCTTCATATA
GTGGCCGGTAGCTCAACGACATCGTTGCTGGGTTCGTTTCGTTCACTGTGTAGAGAAAGAGTTACAACATTGCCTCCTTG
GGTTGTG--GTGGAGAGGAGGAGAAAGTTCAGAAGCAGAGGAGGGCCTCTCTCTATATGGGAAGACGGCCGGATAGGTCG
CTAGGGGCATCGGCGTGCTGCGAGCGAGTGGTGGCCGTCATCTTCATCGTGTGTATTGCCCTTCTAGTGGTGATGGTGGC
GATGACGAGTGGTGCTGGCGTGAGCATAGGGCCGGCTCGAGCCCGCGGCAGAGTGACGATGATGAGCTCCCCGGCACAGA
AGTCAGGTGGCGGACAAGCCGGCGAGGACGCGTACCGAAGCAGCAAGAGGAGGATTCCCAAGGGGCCTGACCCTATCCAC
AACAGGTAAACTTTGATCAGTTCGTGTTTTATGCATATGGATGCACTTGTTGTTTTACTTGGAATGCATGCATTCTGCCT
ATCTACTTGCATTTT-CATCTGTTTTCGGCAAAGTTTATAGTTTTCTAGCACATTTGCTAGAACATTATAATAT------
------------------------------------------TCAAACT-ATCGACTGAACTGGATAAATGACACGGCCT
GAAATACTCTGCTCCTTGATACTCTGCTCTGTCGTTCTTTACACTTACAAGCACTCTGCTCATTTGATTCTCCGGAACAG
ACTCTGCTCAGTTGTCTGCTCTGCTGTCATGCAGTGAACAAGAAGCAGAAGTCTAGAGATGATTTGAAAGTTCTACCGCA
TAAAATAGCAATGAAAAATTTAAACACGGTTCCTATACTTCTCCCGGTTA--AAGGCCAC-AAAAATCTGTAGTTCTTGT
TACGATTAAAAATATGCCTATGTGGATTATAGGATTTCTAATGAGTTGTTGCAATAAAGAGGTCATGGTATTGTTTGGCA
TTTCGTGAGCAGAATAATAAAAAGGAACAAAGCAAGCGTACACTCTGAGCCAAGCACATCATTTCCGAAGTCGCTTTACT
GACAAGAAGAGTGCCAGTGCTGCATACTTCATTCCCATTAGGGACACCTAAGATTCCATTACTAGAACCTTATCTCCCTG
CTTTTGATGATTTACCTAGGTAAACTAAGATCAGGCATCACACCTAGATGATTGGG------------------------
------------------AATATCTCAGTGGGTCTCACAGATCACTGCATGAGAGGGACGTAAGCTCTAAATTAAACATA
AATAAGTAGCCCAGTAACTAATCGTCACCTTCTGCTTTGGTTGCCACTTCCATGTCTGATAGAACTGTGCTTTCAGGCGT
GCCGGGAAGACGACGATCGCGCCACGCCGGAGAGACTAGCACCGGCGAGATGACGACCATTCA-CCGGTGGTCTTATCGG
CTTCCTCCGGCAAACGTTGCTGCGACGGGGAAGCAGGATGGGTTCCTTGGCTTGCTGGAATGAGGCGGAGAGACCAGCTC
TCCTACAATGTGGATTTTGGTAGTGGGGGTAATGTACAAAAGTTGCGATCTTCCCGCAAAAAAATCTGTCATTTTTTTGA
CCGAGATTGATCGACCGATCTACCTTTCGCATATCCTTTCGAGATTTCTTTTGAATCCGTGGCGATTTTGCCCAAAAAAT
TGTTTCTATATGTGTGTGTATTTATCTGTCCGAGCATGTACGCAGATAAGCAGATTGCTCTGCTGCGTCAGTACGTGAAC
TCACTGATGAGCTCCCTATATGCCACTAGCACCTATGTAAATCAAGTTTTGTGGTTTGCAATAACAACCAGAGATTTGTC
GAACGACATGCTTTCTACTACTAGTACTGTACTAGTATGATTTTGCATTGCATGCATGGCCGCGTGGCACAGATATGCAT
GGGACATGAATCTTCTTGGCCTGGAAAGCATGAGAGAAGTATAACATGAGAGGCAGAGAAAGAGGTAAAGCTTCGCATCG
ACGCGTACGGCTCGCGTGTGCATGCGGGTGTGAGACTGGTGGTGCTTTTTTCCTTTTACTTCTTTTCTTGCAACCGTGTA
TTTTGAAGTAACCGAGGAGGGAAAGAAGAAGAAAAGAGTAGAAAGGCACGTATGGGCGTGGATGTGCACGTCGTATCGGG
TTCAGGC-TTTTTTTCTTTCTGAGG-----GGAACGGTTTCAGGCATTTTGAAGTTTAAAAAAT--ATGAAAACAGCTCG
AAT-----------------------------------------------------------------------------
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>chr1D_50
-------------------------------------------------GGCTCAGTGTCTCAGAGGCGCTCATATTTGT
GCCGGCTCAGTATGTCGGAGGTGCTTATAGAATATGTGTGCATGTGTTTATAGGGATGAGTGTATGTGT-TATATATGAG
CATCGGCATTTGTATTGTGTTTTTATAAATAATCT-AACCGCCCATAAGGTGAGACCAGTCTCGGCGTGCCCACACGTCA
GTGGCATAACGGAAGCGTCCGTCCGTCCT----TCTGGAACGGGAAAGAAAGAACAGAATCAGATGAAGCGACGTGATTG
CTAGCGAGCGGAGGAAGCTATATAGCCGGCAAGGCGAGTGCAGCGCGGGGGCCCATCGGCTTCCAAAGCTAGCAGCTCGG
AATCAAGCCGGCCACGTTCCCGAACCAGCTCCGCTCTCGCCCCCATGCATGGTCCTACAAAAGCGCGGCAGCTGATTTGC
TTTCACCCCGCAAAGAAGAGAGAACAAAGCCGCGAAGAAGCAAGAGAAAGCAAAGCAAAGCGAACCGAGCCAAAGCGCCA
CGAGCATCGATCAATGGCCGGAGGAAAAGAAGATTGGG------GGATAAGAATGTTTGGCGGGCAGGGATCACAGATTC
CCTCCCCTTCCAAGTCA----CGTAAAAAGGCGCATTTCGCGCGATCTAAGTGCGCATTAGACGCGCACTTGCGGTGGTG
ATATGCTTTGCTTACCCC-CCTTTCCATAACACCGTATTTGATCTCGCCTGCCTGCCTTGCCATTGTCACTGTCATTGTC
AT------CATGCAGCTGTGCTC---TCCTCTTCTTGTTCTCCCTTTGCTTTTCTCTATTGCTCCCACCAGCTTCATATA
GTGGTCGGTAGCTCGACGTCGTCGTTGCTGGGTTCGTTCCGTTCACTGCGTAGAGAGAA----ATAACATTGCCGCATTG
GGTTGTGGTGTGGAGAGGAGGAGAAAGTTGAGAAGCAGAGGGGAGCCTCTCTCTATATGGGAAGACGGCCGGATAGGTCG
CTAGGGGCATCGGCGTGCTGCGAGCGAGTGGTGGCCGTCATCTTCATCGTGTGTATTGCCCTTCTACTGGTGATGGTGGC
GACGACGAGTGGTGCTGGCGTGAGCTTAGGGCCGGCTCGGGCCCGCGGCGGAGTGACGATGACGAGCTCCCCGGCACAGA
AGTCAGGTGGCGGACAAGCCGGCGAGGACGCGTACCGAAGCAGCAAGAGGAGGATTCCCAAGGGGCCTGACCCTATCCAC
AACAGGTAAACTTTGATCGGTTCGTGTTTGATGCATATGGATGCACTTGTTGTTTTACTTGGCATGCATGCATTCTGCCT
ATCTACCTGCATTTTTCATCTGTTTTTTGCAAAGTTTATAATTTTCTAGCGCATTTATCAAGAAATGGAAGATATTTTTG
CATCATCATAATTGAAATATTTATGACTCTTAACTAGTGGGATCAAACT-ATCGACTGAACTGTATAAATGACACGGC--
-----------------GATACTCTGCTCTGTTGTTCTTTACACTTACAAGCACTCTGCTCATTTGTTTCTCCGGAACAG
ACTCTGCTCAGTTGTCTGCTCTGCTGTCATGCAGTGAACAAGAAGCAGAAGTCTAGAGATAATTTGAAAGTTCTACCGCA
TAAAATAGCAATGAAATATTTAAACACAGTTCTTATACTTCTCCCGGTTA--AGGCCACAAAAAAATCTGTACTTCTTGT
TACGATTAAAAATATGCCTATGTGGATTATAAGGTTTCCAGTGAGTTATTGCAATAAAGAGGTCTTGGTATGGTTTGGCA
TTTCGTGAGCAGAATAATAAAAAGGAACAAAGCAAGCGTACACTCTGAGCCAAGCACATCATTTCCGAAGTCGCTTTACT
GACAAGAAGAGTGCCAGTGCTGCATACTTCATTCCCATCAGGGACACCTAAGATTCCATTACTAGAACCTTATCTCCCTG
CTTTGAATGATTTACCTAGGTAAACTAAGATCAGGCATCACACCTAGATGATTGGG------------------------
------------------AATATCTCAGTGGGTCTCACAGATCACTGCATGAGAGGGACGTAAGCTCTAAATTAAACATA
ACTAAGTAGCCCACTAACTAATCGTCACCTTCTGCTTTGGTTGCCACCTCCGTGTCTGATAGAACTGTGCTTTCAGGCGT
GCCGGGAAGACGACGATCGCGCCACGCCGGAGAGACTAGCACCGGTGAGATGACGACCATTCA-CCGGTGGTCTTATCGG
CTTCCTCCGGCAAACGTTGCTGCGACGGGGAAGCAGGAATGGTTCCTTGGCTTGCTGGAATGAGGCGGAGAGATCAGCTC
TCCTACAATGTGGATTTTGGTAGTGGGGGTAATGTACAAAAGTTGCGATCTTCCCGCAAAAAAATCTGTCATTTTTTTGA
CCGAGATTGATCGACCGATCTACCTTTCGCATATCCTTTCGAGATTTCTTTTGAATTCGTGGTGATTTTGCCCAAAAAAT
TGTTTCTACTTGTGTGTGTATTTATCTGTCTGAGCATGTACGCAGATAAGCAGATTGCTCTGCTGCGTCAGTAAGTGAAC
TCACTGATGAGCTCCCTATATGCCACTAGCACCTATGTAAATCATGTTTTGTGGTTTGCAATAACAAGCAGAGATTTGTC
GGACGACATGCTTTCTACTAGTACT---------GTATGATTTTGCATTGCATGCATGGCCGCGTGGCACAGATATGCAT
GGGACATGAATCTTCTTGGCCTGGAAAGCATGAGAGAAGTATAACATGAGAGGCAGAGAAAGAGGTAAAGCTTCGCATCG
ATGCGTACGGCTCGCGTGTGCATGCGGGTGTGAGACTGGTGGTGCTTTTTTCCTTTTACTTCTTTTCTTGCAACCGTGTA
TTTTGAAGTAACCGAGGAGGGAAAGAAGAAGAAAAGAGTAGAAAGGCACGTATGGGCGTGGATGTGCACGTCGTATCGGG
TTCAGGC-TTTTTTCTCTCTCTTTTTTTAAGGGACAGGTTTAGGCATTTTGAAGTTTAAAAAAGAAATGAAAACAGCTCG
AATACGACAAATACTATAAGATGTGGACTTAACATTTTGATGCAAACATATGACAAATTCGCCCGTACAAAGGTGAGCTA
AGAGCACGACACCGACTCTCAAACCACACGCAGCCGTTCGGACCGTGCGGTCTGGACGTGTTTTGCCATTCAACGCGGTC
CAGCATCGGCCCATCACCGGTCCAGACGTGCATTTTCTCGCAAACCGCTTCTGACTACCCTGGCCA--CTAAAATCCTTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSS----------------------S-----S-----------S------------S-
---------S------S-----S-------------------------------S-------------------S-----
---SS----------S-SSS--S-----------------------SS--------------------------------
----------------------------SSSS------------------S-----------------------------
----------------------------------------------S---------------------------------
-----------------------------------S---S----------------------------------------
-------------------------------S------------------------------------------------
------------------------------S-------S-----------------------------------------
-----S-----------SSSS-----------------------------------------------------------
------------------S-------------------------------------------------------------
-----------------------SSS--------------------S---------------------------------
--------------------------------------------------------------------------------
----S--------S------------S-----------------------------------------------------
-----------------S---S-----------------------S--------S----------S--------------
---------------------SS----S--S--S----S-S--S-S----------SS-S--S-----------SS----
--S----------------------------------------------------------------S------------
----------S------S-S---S---------------S------S---------S---S-------------------
S--------S-S-S-SSS-------------------------------------S------------S-----S-----
--------S---------S---------------------SSSS---S-S-------------S----------------
------------------------------------S------S--------------S---------------------
----------------S------------------------S--------------------------------S-----
------------------------------------S-----S-SSSSSSSS----------S-----------------
-SSSSS----------S--S--------S---------------------------------------------------
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-------------------S------------------------------------------------------------
--------------------S-------S--------S------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS------------------------S----------------S------S----S------S-
-S----------------------S--S------S-----------------S---------------------------
-----------S-----S---------------------S-------------------SS--S-----SS---------
-SSS---------------S--------------S---------------------------------------------
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----------------------------------------------------------------------------S---
-------S-------------------S--------------------------S------------S------------
S-------------S----------S-------------------S------------------S-S---S-------S-
---S-S-S-SS---S-SS-SSSS--S----------------------------S-------------------------
--------------------------------------S-------S-----------------S---------------
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-----------------------------S--------------------------------------------------
-----S-S-----S------------------------S-----------------------------------------
------------S--------------------------------------S-----------S--------S-------
--------------------------------S-----------------------------------------S-----
---S---------S-SS------S----SS-------S------S-----S--SS----------SSS------------
>forward_659
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-------------------------------------------------------------------------------C
CCTCCTCTTCCAAGTCACG-------------------------------------------------------------
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>reverse_2300
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-----------------------------------------------------------CCCACCCGGTCTTCTTATCG-
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