>input_sequence_56020
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CACAGTGCCCTGTGCCCGAGG
CCATTCCGTACGCAA--GAGATGGCGCGCAGGAGCGGAGCCTTCTCGCGCTTGGCCGTCGTCGTCGTCGCGGCCTACTGC
CTCGCCGCCGCGACGCCCGGGGCTGCCGACTGGATCAAGGGCTCCGCCACCTTCTACGGCGGGAGCAACGCCGCCGGCAC
CATGGGTAAGCGACGAC---CGATT--GCTCCTCGCATTGCCTGTCTTGTAC-----------CGCCGTTGACACATGCT
GATCGAGGATATGGCGTTGTAACTAATGGCAGGGGGCGCTTGCGGGTACGGCAACCTGTACTCGACGGGGTACGGGACGA
ACACGGCGGCGCTGAGCACGTCGCTCTTCAACGACGGGGCGGCGTGCGGGGAGTGCTACCAGGTGCAGTGCGACCAGGGC
AGCTCCCCGAACTGCAAGCCGGGGGTGACGGTCACCATCACCGCCACCAACCTCTGCCCGACGGACTACTCCAAGCCCA-
--ACGACAACGGCGGCTGGTGCAACCCGCCGCGGAAGCACCTGGACATGGCGCAGCCCGCGTGGGAGCGCATCGGCGTCT
ACCGCGCCGGCATCGTGCCCATCCTCTTC---CAGCGGGTGTCCTGCTCCAGGAGCGGCGGCGTGCGGTTCACCATCAAC
GGCAACAGCTACTTCGAGCTGGTGCTCATCACCAACGTCGGCGGGC-CGGGGTCGATCAGGGCGGTGCAGATCAAGGGGT
CCCGGACCGGGTGGACCACCATGTCCCGGAACTGGGGCGCCAACTGGCAGTCCAACAGCTACCTCAACGGGCAGTCCATC
TCCTTCGCCGTCACCGCCACCAACGGCCAGAAGGTGGTCTTCCAGGACGTGGCGCCCAGCAACTGGGGGTTCGGCCAGAC
CTTCACCAACTCCGGCCAGTTCTACTAGCGATCCCCGCGCGC-----------------------CGCCGGAGCGCTCCC
GCGCCTTCGTTTCCGTTTACGC-TTTTTCGATTTCGCATTTGGGAACTCAAGTAAGATTAGCCTCATTCTCATGGATGGG
AAGTGGTAGGTAGTAGGTAGCTAGGTGCCGCGCGTGGGGTGGTTTGCATGGCTGAGGTGCCTCATCGATCAATTACCCGC
CGTGCCTGCCGCCG----TGCGATGACCG------------GCTGAAATGGCGCCCCGATCCTCGCTGCAAGGCGCGGAC
TGTTTACTGTTGACCACCGATCCATTGATGATTTTAATTAATACTATAATAGAATGTGATAGCCATGGTTTCTGACTTTG
ACCA---GTAAAATGAATGCATGTGCGTTAT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr4A_1_TraesCS4A01G034400
TGTGCATGGCAGTTGACTTGCCCCAAAGCAAAAGAGTTTCTTCCCGTAGATTCCAATCAACCGAGCAAGACAAAGTTAAG
CTCGAGGCC--CGCGCGGGGGGAGAACTAAC----CCTCCCGTAAATCAAGCCAAAATGACCTACCTAGGGTGCTAAATT
CCCCTAGCCCTCACCCCTAACCCTAACCCTAACCGCTAGTACCTGCCAGTGGGGACCACACAGTAACAACGAGCGCAAGT
GG---AGTGGGAGTAGCTTCCATTTCTTGGCGGGTATCAGTTGGGCCGA----------------------------GCT
GAGCAGCGCGTCAAGCGGCTCAATCCAAGGGGCCGCATCGTGGTTTGGAGTGGTTAGGCCTAGGGCTAGGGGCTTGCTTA
CCGATCCAATGACCCTCGGTAACCACTCCATCGCCAGTAATCCCCATGTGATTCAGGGCAG-------------------
-------------CGAGCCTCGTGAGCTCACGTGACGCCTCCGCCTCCGGATGGTCGAGCTGGTTTACTTCTGATCGAAA
TGTTAATGCTGGTCACTCGTACGTACTAGAGTACTACTGTACGTCTCCCTCCCTCCCAGCTGATGATTGTTTTATGTTGA
TCGAAATGTTAATGTTGATCCCAAATGATTAAGACGGACTACT---GGCACGGATCAGTGGAACCTACTGGGGCACAGTG
GGCCGGCTCTGCTGCTTGCCAGAGAAGAAAGA--AAATGAAA-AGAGTCGGCGGCCCTCCGCAGATCGGCCAG-------
-GGGAATCCTTGGAGAACGTAATGGAGGAGCAGCAGAGACGACCCATTCATTTCTTGGGCGGGAGAAAAATGAAATCAGG
AATCGTGCATGGCATGGCATG-----CATTTATGGCGCTGGGTGCAACGGGGCCGTCGACCGCCTCGGCGGGCACGTGAG
TCCCCGCCGGGCTTCGCGCGC-----------GCCTCAATCGCCGCATCGCTATTTAACCACCGCCGACGCCATGGCTTT
TCCACCTCCTCACTTCACTCCCCTCCCACGTCGCCTGCCGATCGAGTGCACCCACCCACCACAGTGCCCTGTGCCCGAGG
CCATTCCGTACGCAA--GAGATGGCGCGCAGGAGCGGAGCCTTCTCGCGCTTGGCCGTCGTCGTCGTCGCGGCCTACTGC
CTCGCCGCCGCGACGCCCGGGGCTGCCGACTGGATCAAGGGCTCCGCCACCTTCTACGGCGGGAGCAACGCCGCCGGCAC
CATGGGTAAGCGACGAC---CGATT--GCTCCTCGCATTGCCTGTCTTGTAC-----------CGCCGTTGACACATGCT
GATCGAGGATATGGCGTTGTAACTAATGGCAGGGGGCGCTTGCGGGTACGGCAACCTGTACTCGACGGGGTACGGGACGA
ACACGGCGGCGCTGAGCACGTCGCTCTTCAACGACGGGGCGGCGTGCGGGGAGTGCTACCAGGTGCAGTGCGACCAGGGC
AGCTCCCCGAACTGCAAGCCGGGGGTGACGGTCACCATCACCGCCACCAACCTCTGCCCGACGGACTACTCCAAGCCCA-
--ACGACAACGGCGGCTGGTGCAACCCGCCGCGGAAGCACCTGGACATGGCGCAGCCCGCGTGGGAGCGCATCGGCGTCT
ACCGCGCCGGCATCGTGCCCATCCTCTTC---CAGCGGGTGTCCTGCTCCAGGAGCGGCGGCGTGCGGTTCACCATCAAC
GGCAACAGCTACTTCGAGCTGGTGCTCATCACCAACGTCGGCGGGC-CGGGGTCGATCAGGGCGGTGCAGATCAAGGGGT
CCCGGACCGGGTGGACCACCATGTCCCGGAACTGGGGCGCCAACTGGCAGTCCAACAGCTACCTCAACGGGCAGTCCATC
TCCTTCGCCGTCACCGCCACCAACGGCCAGAAGGTGGTCTTCCAGGACGTGGCGCCCAGCAACTGGGGGTTCGGCCAGAC
CTTCACCAACTCCGGCCAGTTCTACTAGCGATCCCCGCGCGC-----------------------CGCCGGAGCGCTCCC
GCGCCTTCGTTTCCGTTTACGC-TTTTTCGATTTCGCATTTGGGAACTCAAGTAAGATTAGCCTCATTCTCATGGATGGG
AAGTGGTAGGTAGTAGGTAGCTAGGTGCCGCGCGTGGGGTGGTTTGCATGGCTGAGGTGCCTCATCGATCAATTACCCGC
CGTGCCTGCCGCCG----TGCGATGACCG------------GCTGAAATGGCGCCCCGATCCTCGCTGCAAGGCGCGGAC
TGTTTACTGTTGACCACCGATCCATTGATGATTTTAATTAATACTATAATAGAATGTGATAGCCATGGTTTCTGACTTTG
ACCA---GTAAAATGAATGCATGTGCGTTATATGCTCTTTCACCAT----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------GGTAAAATGCGGGCGGACATCGAAGT
GTGTGGTCTGAAGTAAACGATTAATTGGAGTCCTTATTAAGTTATTACATGTACTCCCTCCGTCCTTTAAAGAATATACT
TCCAACTTTGTTGGAGGGTCAAACTATCTCAATGTTTGACCGAGTTTGTGCAAAAATGTATCAATGTTTATGAAACCAAA
TAGGTATATATTTTATCATGAATCTAATGCTACTAATTTGATGGCATAAATGTTGGTGCATTATTGTATAAATACGGTCA
AACATAAAAAGGTTTGACTTTCCAACAAAGTTGGAAGTACACTCTTCAAAGGACGGAGGGAGTACGTAAGTGTCATTGAG
CTGAGAAGTGTACTACTACTCTTTCCATCTAGATATATAAGTCATCTTACGAAAATTAAATAATTCCAAAACACTTAGGA
TCATATTATTGAAACTCATATGCTTCACCTCTTCTCTTGGGTAAACTCATATGCTTCACCTCTTCTCTTGGGTAAACAGG
GACAAATGACAACGAACGTTGGACCTATCCTTTCTGCATTCTCATAGACAAGTGTCGCAAATCACTTCTGGCGTTGGATG
TTGAATGAAACCATTCTTGTGGTCTGCTATCTGCTGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGCCGGAGTCAATT
ACGTGTAGTCAGCACTTACAAAAACACCCTTAAACAGTGGCGGAGCTAGATGCAGACTACACCTGGGGCTGTGCTATGTT
GAGTGATAAACTTCTATGATTTTCTATACTTTGCATGAAGAAATTACAAAGGAAGTTGTTTCTAGGCCTGGGGCTATAGC
CCTAGCTGCCCCAGGCCTGTCTCCGCCACTGCCCTTAAAAGAACATGATGAAATAAGCACCTTTTCTCTTATGCACTTAC
CTCTATTTTATTATTTTTCTATTCATTTTGTACATAAACATCTTTTAAATACATGATGAAATATTGTAAATACACAATG
>chr4B_1
TGTGCATGGCAGTTGACTTGCCGCAAAGCAAAAGAGTTTCTTCACGTAGATTCCAATCAACCGAGCAAGACAAAATTAAG
CTCGAGGCC--CGCGCGGGAGAAAAACTAAT----CCTCCCGTAAATCATGCCAAAATTACCTACCTATGGTGCTAAATT
CCCCTAGCCCTCAC------CCCTAACCCTAACCGCTAGTACCTGCCAATGGGGACCAGGCAGTAACAACGAGCGCAAGT
GG---AGTAGTAGTAGCTTCCATTTCTTGGCGGGTATCAGTTTTTTTTTTTTTTAGGTAATGGCGGGTATCAGCTGGGCT
GAGCAGCGCGTCAAGCGGCTCAATCCAAGGGCCCGCGTCGTGGTTCGGTTG----AGGCCTAGGGCTAGGGGCTTGCTTA
CCGATCCAATGACCCTCGGTAACCACTCCATCGCCAGTAATCCCCATGTGACTCA-------------------------
------GAGCGGCCGAGACTCGTGAGCTCACGTGACGCCTCCGCCTCCGGATGGTCGAGTTGGTTTACTTCTGATCGAAA
TGTTAATGCTCATCGCTCGTACGTACTGTACGT---------------CTCCCTCCCAGCTGATGATTGT----------
--------TTAATGTTGATCCCAAATGATTAAGACG---TACT---TGCACGGATCAGTGGAACCTACTAGGGCACAGTG
GGCCGGTTCTGCTGCTTGCCAGAGAAGAAAATGTAAATGGAA-ATAGTCGGCGGCCCCCTGCAGATCGGCCAGC------
--GGAATCCTTCGAAAACGTAGCGGAGCAGAGACTTTTT-------TTCATTTTTTGGGCGGGAGAAAAAGAG--TCAGG
AATCGTGCATGGCATGGCATGGCATGCATTTAAGGCGCTGGGTGCAACAGGGCCGTCGACCGCCTCGGCGGGCACGTGAG
TCCTCGCCGGGCTTCGCGCGCGCCGATCCCGTGCCTCAATCGCCGCATCGCTATTTAAGCACCGCCGACGCCATGGCTTT
TCCACCTCCTCACTTCACTCGCCTCCCACGTCGCCTGCCGATCGAGTGCACCCACCCACCACAGTGCCCTGTGCCCGAGG
CCATTCCGTACGCACTGGAGATGGCGCGCAGGAGCGGAGTCTTGTCGCGCTTGGCCGTCGTCGTCGTCGCGGCCTACTGC
CTCGCCGCGGCGACGCCTGGGGCTGCCGACTGGATGAGGGGCTCCGCCACCTTCTACGGCGGGAGCAACGCCGCCGGCAC
CATGGGTAAGTGACGATCCACGACT--ACTCCTCGCTTTGCGTATTTGCATTGCACTTTTGCGCGCCGTGGATATGTACT
GATCGAGGA--TGGCGTTGTAACTAATGGCAGGCGGCGCTTGCGGGTACGGGAACCTGTACTCGACGGGGTACGGGACGG
ACACGGCGGCGCTGAGCACGTCCCTCTTCAACGACGGGGCGGCGTGCGGGGAGTGCTACCAGGTGCAGTGCGACCAGGGC
AGTTCCCCGAACTGCAAGCCGGGGGTGACGGTCACCATCACGGCCACCAACCTCTGCCCGACGGACTACTCCAAGCCCA-
--ACGACAACGGCGGCTGGTGCAACCCGCCCCGCAAGCACCTGGACATGGCGCAGCCCGCGTGGGAGCGCATCGGCGTCT
ACCGCGCCGGCATCGTGCCGGTCCTGTTC---CAGCGGGTGCCCTGCTCCAGGAGCGGCGGCGTGCGGTTCACCATCAAC
GGCCACAGCTACTTCGAGCTGGTGCTCATCACCAACGTCGGCGGGC-CGGGGTCGATCAGGGCGGTGCAGATCAAGGGGT
CCAGGACCGGGTGGACCACCATGTCCCGGAACTGGGGCGCCAACTGGCAGTCCAACAGCTACCTCAACGGCCAGTCCATC
TCCTTCGCCGTCACCGCCACCAACGGCCAGAAGGTCGTCTTCCAGGACGTGGCGCCCAGCAACTGGGGATTCGGCCAGAC
CTTCACCAACTACGGCCAGTTCTACTAGCGATTCCCGCGCGCCGC----CGTGCGTGCACGCCGGCGCCGGAGCGCTCCC
GCGCCTTCGTTTCCGTTTACGC-TTT-TCGATTTCGCATTTGGGAACTTAAGTAAGATTAGCTGCATTCTCATGGATGGG
AAGTGGTAGGTAG---GTAGCTAGGTGCCGCGCGTAGGGTGGTTTGCATGGCTGAGGTGCCTGATCGATCAATTACCCGC
CGTGCTTGCCGCCTTCCTTGCGATGACCGGCTGATGTGCTAGCTGAAATGGCGCCCCGATCCTCGCTGCAAGGCGCGGAC
TGTTTACTGTTGACCACCGATCCATTGATGATTTTAATTTA---TATAATAGAATGTGATGGCCATGGTTTCTGACTTTG
ACCA---GTTAAATAAATGCATGTGCGTGGTATGCTCTTCAC--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GAATGTGCCCAAGGGTAAAATGGGGGTGGACATCGAA--
GTGTGGTCTGAAGTAAACGATGAATTGGATCAC----TACGTTATTACATGT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr4D_1
TGTGCATGGCAGTTGACTTGCCCCAAAGCAAAAGAGTTTCTTCCCGTAGATTCCAATCAACCGAGCAAGACAAAATTAAG
CTCGAGGCCCGCGCGCGGGAGAAAAACTAATTAATCCTCCCTTAAATCAAGCCAAAATGACCTACCTAGGGTGCTAAATT
CCCCTAGCCCTCAC------CCCTAACCCTAACCGCTAGTACCTGCCAGTGGGGACCACACAGTAACAACGAGCGCAAGT
GGAGTAGTAGTAGTAGCTTCCATTTCTTGGCGGGTATCAGTTG-----A----------------------------GCT
GAGCAGCGCGTCAACCGGCTCAATCCAAGGGGCTGCATCGTGTTTTGGAGTAGT------TAGGGCTAGGGGCTTGCTTA
CCGATCCAATGACCCTCGGTAACCACTCCATCGCCAGTAATCCCCATGTGACTCTTCCCTCAAAAAAAAAATCCCCATGT
GACTCGGAGCGGCCGAGTCTCGTGAGCTCACGTGACGCCTCCGCCTCCGGATGGTCGAACTGGTTTACTTCTGATCAAAA
TGTTGATGCTCATCACTCGTACGTACTGTACGT---------------CTCCCTCCAAGCTGATGATTGTTTAGTCGTAC
G--------TAATGTTGATCCCAAATGATTAAGACG---TACTACTGGCACGGATCAGTGGAACCTACTAGGGCACAGTG
GGCCGGCTCTGCTGCTTGCCAGAGAAGAAAATGAAAATGCGGCAGAGTCGGCCGCCCCCTGCAGATCAGCCAGTGGAAAT
GGGGAATCCTTCGAAAACGTAGCGGAGCATAGAC---TT-------TTCATTTTTTGGGCGGGAGAAAAAGAGAGTCAGG
AATCGTGCATGGCATG----------CATTTAAGGCGCTGGGTGCAACGGGGCCGTCGACCGCCTCGGCGGGCACGTGAG
TCCCCGCCGGGCTTCGCGCGCGCC-----------TCAATCGCCGCATCGCTATTTAACCACCGCCGACGCCATGGCTTT
TCCACCTCCTCACTTCACTCGCCTCCCGCGTCGCCCGCCGATCGAGTGCACCCACCCACCACAGTGCCCTGTGCCCGAGG
CCATTCCGTACGCACTGGAGATGGCGCGCAGGAGCGGAGTCTTGTCGCGCTTGGCCGTCGTCGTCGTCGCGGCCTACTGC
CTCGCCGCGGCGACGCCCGGTGCTGCCGACTGGATGAGGGGCTCGGCCACGTTCTACGGAGGGAGCAACGCCGCCGGCAC
CATGGGTAAGTGACCATCCACGACTGCGCTCCTCGCTTAGCGTATTTGCATTGCACTTCTGCGCGCCGTGGATATGTACT
GATCGAGGA--CGGCGTTGGAACTAATGGCAGGCGGCGCTTGCGGGTACGGCAACCTGTACTCGACGGGGTACGGGACGG
ACACGGCGGCGCTGAGCACGTCCCTCTTCAACGACGGGGCGGCGTGCGGGGAGTGCTACCAGGTGCAGTGCGACCAGGGC
AGCTCCCCGAACTGCAAGCCGGGGGTGACGGTCACCATCACCGCCACCAACCTCTGCCCGACGGACTACTCCAAGCCCA-
--ACGACAACGGCGGCTGGTGCAACCCGCCGCGCAAGCACCTGGACATGGCGCAGCCCGCGTGGGAGCGCATCGGCGTCT
ACCGCGCCGGCATCGTGCCCATCCTGTTC---CAGCGGGTGTCCTGCTCCAGGAGCGGCGGCGTGCGGTTCACCATCAAC
GGCAACAGCTACTTCGAGCTGGTGCTCATCACCAACGTCGGCGGGC-CGGGGTCGGTCAGGGCGGTGCAGATCAAGGGGT
CCCGCACCGGGTGGACCACCATGTCCCGGAACTGGGGCGCGAACTGGCAGTCCAACAGCTACCTCAACGGGCAGTCCATC
TCCTTCGCCGTCACCGCCACCAACGGCCAGAAGGTGGTCTTCCAGGACGTGGCGCCCAGCAACTGGGGGTTCGGCCAGAC
CTTCACCAACTCCGGCCAGTTCTACTAGCGATTCCCGCGCGCCGCCGTGCGTGCGTGCGCGCCGGCGCCGGAGCGGTCGC
CT---TTCCTTTCCGTTTACGCCTTT-TCGATTTCGCATTTGGGAAGTTAAGTAAGATTTGCCTCATTCTCATGGATGGG
AAGTGGTAGGTAGTAGGTAGCTAGGTGCCGCGCGTAGGGCGGTTTGCATGGCTGAGGTGCCTGATCGATCAATTACCCGC
CGTGCCTGCCGCCTTGCTTGCGATGACCGGCTGATGTGCTAGCTGAAATGGCGCCCCGATCCTCGCTGCAAGGCGCGGAC
TGTTTACTGTTGACCACCGATCCATTGATGATTTTAATTTA---T---ATAGAATGTGATGGCCATGGTTTCTGACTTTG
ACCACCAGTTAAATGAATGCATGTGCGTGATATGCTCTTCACGAAGAGCAATGCTATGGGGACGACAAAGTTTGGACGAC
TCATGAACGACGATTAAATCGAGCCGACGAATCTCAAGCACAGCTGAGCAGTGGCCGCTGGATCCTTTGGTCGTGCACTT
ATCGTCCTCACACTGTCGTGTATGGAGCAGTTTCGCTTCAGGAATGTGCCCAAGGGTAAAATGGGG-TGGACATCGAAGT
GTGTGGTCTGAAGTAAACGATTAATTGGATCAC----TACGTTATTACATGT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr4A_1258
CGTATGTAACGTAT------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GCAGGAGGCGCGTGTGGGTACGGCAACCTGTACAGCTCCGGGTACGGGATCA
ACAACGCGGCGCTGAGCACGGCGCTGTTCAACGACGGCGCCATGTGCGGCGCGTGCTACACCATCTACTGCGACACCGGC
AGGAGCAGGATGTGCAAGCCGGGCACCCAGATCACCGTCTCCGCCACCAACTTCTGCCCGCCCAACTGGGCGCTCCCCA-
--GCGACAACGGCGGCTGGTGCAACCCGCCGCGGGTGCACTTCGACATGTCGCAGCCCGCCTGGACCAGCATCGCCATCT
ACGAGGCCGGCATCGTCCCCGTCGTGTAC---AGGAGGGTCTCCTGCCAGAAGCGCGACGGCATCCGCTTCGGCATCTCC
GGGAGGGACTACTTCGAGCTGGTGGTGGTCACCAACGTCGGCGGCAGCGGGGTCGTGTC-CCAGATGTGGATCAAGGGCT
CCAACACCAACTGGCTCGCCATGAGCCGCAACTGGGGCGCCAACTGGCAGAGCAACGCCTTCCTCAACGGCCAGAGGCTC
TCCTTC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr5B_1272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GCAGGAGGCGCGTGTGGGTACGGCAACCTGTACAACTCGGGGTACGGGATCA
ACAACGCGGCGCTGAGCACGGCGCTCTTCAATGACGGCGCCATGTGCGGCGCGTGCTACACCATCTACTGCGACACCGGC
CGGAGCAGGATGTGCAAGCCGGGCACCCAGATCACCGTCTCCGCCACCAACTTCTGCCCGCCCAACTGGGCGCTCCCCA-
--GCGACAACGGCGGCTGGTGCAACCCGCCGCGCGTGCACTTCGACATGTCGCAGCCCGCCTGGACCAGCATCGCCATCT
ACCAGGCCGGCATCGTCCCCGTCGTGTAC---AGGAGGGTCTCCTGCCAGAAGCGCGACGGCATCCGCTTCGGCATCTCC
GGGAGGGACTACTTCGAGCTGGTGGTGATCACCAACGTCGGCGGCAGCGGGGTCGTGTC-CCAGATGTGGATCAAGGGCT
CCAACACCAACTGGCTCGCCATGAGCCGCAACTGGGGCGCCAACTGGCAGAGCAACGCCTACCTCAACGGCCAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3A_1273
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAGGCGGCGCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGC
GGACGACGGCGCTGAGCACCGCCCTGTTCAACAACGGCGCGTCGTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGC
AAGTCGCGGATGTGCAAGCCGGGGGCCTCCATCACCGTCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGCCGG
CGGCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCCAGCCGGCGTGGGAGACCATCGCCGTCT
ACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAGGGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAAC
GGCCACAGCTACTTCGAGCTGGTGCTGGTGACCAACGTGGGCGGCAGCGGCGGCGTGGC-GCAGATGTGGATCAAGGGCT
CCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGCGCAAACTGGCAGAGCAACGCCAACCTCGACGGCCAGAGCCTC
TCGTTCCGCGTCA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3D_1273
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAGGCGGCGCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGC
AGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGGCGCGTCGTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGC
AAGTCGCGGATGTGCAAGCCGGGGGCCTCCATCACCGTCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGCCG-
--GCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCCAGCCGGCATGGGAGACCATCGCCGTCT
ACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAGGGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAAC
GGCCACAGCTACTTCGAGCTGGTGCTGGTGACCAACGTGGGCGGCAGCGGCGGCGTGGC-GCAGATGTGGATCAAGGGCT
CCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGCGCGAACTGGCAGAGCAACGCCAAGCTCGACGGGCAGAGCCTC
TCGTTCCGCCTCA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3B_1273
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CAGGCGGCGCCTGCGGGTACGGCAACCTGTACGGCGCGGGGTACGGCACGC
AGACGACGGCGCTGAGCACCGCCCTCTTCAACAACGGCGCGTCCTGCGGGGCGTGCTTCACGATCGCGTGCGACACGCGC
AAGTCGCGGATGTGCAAGCCGGGGACCTCCATCACCGTCACGGCCACCAACTTCTGCCCGCCCAACTACGCGCTCGCCG-
--GCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGGCCCAGCCGGCGTGGGAAACCATCGCTGTGT
ACAAGGCCGGCATCGTCCCCGTCAACTAC---AGGAGGGTGCGCTGCCAGCGGAGCGGCGGGATCAGGTTCACCATCAAC
GGGCACAGCTACTTCGAGCTGGTGCTGGTGACCAACGTGGGCGGCAGCGGTGGCGTGGC-GCAGATGTGGATCAAGGGCT
CCCGCACCAACTGGATGGAGATGAGCCGGAACTGGGGCGCAAACTGGCAGAGCAACGCCAAGCTCGACGGGCAGAGCCTC
TCGTTCCGCGTCA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3D_1284
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGCGGTTACGGCAACCTGTACGACGCCGGGTACGGGACCA
GCTCGACGGCGCTGAGCACGACGCTGTACGGCGACGGCAAGTCGTGCGGCGCGTGCTACGTCATCACCTGCGACGCCTAC
CACACGCAGTCGTGCAAGCCGGGGACGTCCATCACCGTCACGGCCACCAACTTCTGCCCGCCCAACTGGTCGCAGCCAA-
--GCGACAACGGCGGCTGGTGCAACCCGCCGCGGCAGCACTTCGACATGTCCCAGCCCGCCTGGGAGACCATCGCCGACT
ACCAGGCCGGCTTCGTGCCCATCAAGTACGCCAGGACGGCGTGCCCGCGGAGGAACGGCGGCATCCGCTTCTCCATCACC
GGCCATGACTACTTCGATCTGGTCCTCATCAGCAACGTCGGCGGAAGCGGCGCCGTGTC-GGCGGCGTGGGTGAAGGGCT
CCAACACGGACTGGCTGCCCATGAGCCGCAACTGGGGCTCTAACTGGCAGAGCAACGGCTACCTCACCGGCCAG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------S-----
-------------------S-S-S------S-------------------------------------------------
--------------SSSSSS------------------------------------------------------------
--------S-S--------------------------------SSSSS--------------------------------
---------------------------------------------------S--S-------------------------
---------------------------------------------------S---SSS-SS-------------------
-----------------S--------------------------------------------------------------
----------SS---------------SS-SSSSSSSSSSSSSSSSSS------------------------SS-SS-SS
SSSSSSSS----------------------------SSS------------------------------S----------
------------------------------SS-------S-----------------S-S--------------------
-----------S--S------SS----S--SSS-SSSSSSSSSSSS-------S----------------SSS-S-----
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------S------------------------S---S------------------------------------
--------S--------------------------S-S------------------------------------------
----------S-----S------S------------S----S-S-S-SSSSS-----------------S--S-SS-S--
---------SS----------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------S---------------------S-------------------------------
-----------------------------------S--------------------------S-----------------
-------------S------------------------------------------------------------------
---------------------------------------S-SSS----------------S-------------------
---------S------------------S----------SSSSS-S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---S------------
-----------------------------SSS-SSSS--S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_836
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------ACGTAATGGAGGAGCAGCAG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>reverse_2927
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CAAAGGACGGAGGGAGTACG--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
