>input_sequence_56018
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----------------------------------------CCGTACCCACAGACAAAGAGGATATGAGTCTTGATCTTAA
TATCGGGTGGAAAGATAGAGAAAGGGAGAAAATTGGCCTCAATGCAAGGTGTTCGCCTTCCATGCAGGACTATTCATCAT
ACGGGAAGGAACTGGTGGAGGTGTTGTCGGTACGTTATAAAGGTCAGGGAGATCCAAGCTGCACCATCATCGTCTACGAT
GGTAAGCGCGGGCAGATCATCTACACACAAAGTGG---CCAGGGCGACATGAGAGTATCTCACGAACATTCAAATTCTGG
CACTCAGGTCCGCGCTCTCACATGCCATTAGTAAGACATTCATGTGAAGCGTAAGACATGCCAATTTGCTTTCAAATGAT
ATGGCGTGCATGAAGTTCTTTGTCTC--TATATTTCTTCCCTGCTTAAAA--ATGAATTGGCCAAGTACCTGCATAAATT
GAATTCCCGTGCCAACCTTGCAAGATCTAACTC----------------AATTTCATTGCCCACTGTGATTAAACAGAAT
GGAAGCAATGATCGCCGGCTTCTGCTGACGGGTCCTTATCGAGTGATCTCAATGGATGGGTGCGTTCTCATCGAGTACAA
TATCGATGATCACTGCCATGCTAAGATACTTCTAGACATTGATGATCCATCCACAAAACATGATGAGGCCGTCACAGCCG
AACTGGGTTGTACGTGTGATAACCACCCCAAAGCAGTGGTCACGTACGCTCTTCTGAGCAACGCGGTAGAAGCCATTGTT
GAGGTGAAGCTCCACCAACGACGAGATAATACTTTCTATGGGACGATCATTGCTTACAGTTATCTAGGTGACGTCGTGCT
CTTTGAAACAGACAATGAGAAGACACTCATTGGGTCGTCACAAGAGCCGACGATTATCCCATTAGCTAGATCGGTTCTTG
CCGTGCCATTGGATTCGTCCCTACAGATTGAAGTGGATCTATGGAATCATTCCAATGGTAAGATCGTGAAAGGCCTCGTG
TCGTGTCAGGCCCACCTGAACAGCAATCATGTGGTGCACCTTGATGGGGAGAATGGTCAGGTGGATGTGAAGATCACATG
GTCAGACTAAACAGCTG-ACTGTGGGTGTACTTTCGTACAATGTATGTACAGTTTGTGTCTAACCATGTACATAAAGTAG
ATAAGATGGCCGGCTTCCAGCATGGTACCCATCCATGCGATGGTTGATTTTTTATATTTTTTTGCGAATGTTGCGATGGC
TGATTTAGCTACATTTGTACAAGAACATAGTAAAAATGTTACTTATAT--------------------------------
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>chr3B_1_TraesCS3B01G604400
GCAAGCGTCTTACACGCGGCAAGTATACTAATCGTAGTTTCCTAGCTTTGTAAACTAGCCTGCACCTTCGGCTGCCTGGA
AGGTCGACGGGGCAGTTATCTTCTTAGGCTCAGATTCTTTGAACTAGTCATCATATTCGTAGAAAGGGATCCAATTCCTT
TTCTGACGGGTCGTGTTCCTTTGGCCCACAGGATTTGTCATATTCTCCTCTAAATAAATAAGGCAGTCACATTCCTTCAG
TTTCATAAAGATTTCACAGGAAAAAAAAGTCCAATCTGTGAAAAATTCTAAAGGCTGCATGCACACAGTCGATTGAACAA
ATCTTCGTGGGGTTCAAGCAACCATTGTGAACTAGTTATCCCAATTGTGGCGTATATGGATGAACTTGAACCATATGGAT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTA
ATGGCAGGCAAATCGAACACACGCGTAAAAGAACGGGTTTATGAGACTGGACGGATGGAGTATACTTACCAGCGAAGCAT
GTTTGCAGATTGTGTTCTCCGTCTAAGTTAATTGTGTGTTTTTTTATTGTTCAAAGATCATAGTGGAAGCTACGCAGACG
TGGTGTCCAGATGCAGAGGTCGGGGGTCCTCCTCCTTTTCTAAAAAAAAATATAATCCTTCATTGGTGGAGAGATGCGTT
TTGTATAAATAGCGCTTAATGTCCCTGGTGCGTACAAACACCGTACCCACAGACAAAGAGGATATGAGTCTTGATCTTAA
TATCGGGTGGAAAGATAGAGAAAGGGAGAAAATTGGCCTCAATGCAAGGTGTTCGCCTTCCATGCAGGACTATTCATCAT
ACGGGAAGGAACTGGTGGAGGTGTTGTCGGTACGTTATAAAGGTCAGGGAGATCCAAGCTGCACCATCATCGTCTACGAT
GGTAAGCGCGGGCAGATCATCTACACACAAAGTGG---CCAGGGCGACATGAGAGTATCTCACGAACATTCAAATTCTGG
CACTCAGGTCCGCGCTCTCACATGCCATTAGTAAGACATTCATGTGAAGCGTAAGACATGCCAATTTGCTTTCAAATGAT
ATGGCGTGCATGAAGTTCTTTGTCTC--TATATTTCTTCCCTGCTTAAAA--ATGAATTGGCCAAGTACCTGCATAAATT
GAATTCCCGTGCCAACCTTGCAAGATCTAACTC----------------AATTTCATTGCCCACTGTGATTAAACAGAAT
GGAAGCAATGATCGCCGGCTTCTGCTGACGGGTCCTTATCGAGTGATCTCAATGGATGGGTGCGTTCTCATCGAGTACAA
TATCGATGATCACTGCCATGCTAAGATACTTCTAGACATTGATGATCCATCCACAAAACATGATGAGGCCGTCACAGCCG
AACTGGGTTGTACGTGTGATAACCACCCCAAAGCAGTGGTCACGTACGCTCTTCTGAGCAACGCGGTAGAAGCCATTGTT
GAGGTGAAGCTCCACCAACGACGAGATAATACTTTCTATGGGACGATCATTGCTTACAGTTATCTAGGTGACGTCGTGCT
CTTTGAAACAGACAATGAGAAGACACTCATTGGGTCGTCACAAGAGCCGACGATTATCCCATTAGCTAGATCGGTTCTTG
CCGTGCCATTGGATTCGTCCCTACAGATTGAAGTGGATCTATGGAATCATTCCAATGGTAAGATCGTGAAAGGCCTCGTG
TCGTGTCAGGCCCACCTGAACAGCAATCATGTGGTGCACCTTGATGGGGAGAATGGTCAGGTGGATGTGAAGATCACATG
GTCAGACTAAACAGCTG-ACTGTGGGTGTACTTTCGTACAATGTATGTACAGTTTGTGTCTAACCATGTACATAAAGTAG
ATAAGATGGCCGGCTTCCAGCATGGTACCCATCCATGCGATGGTTGATTTTTTATATTTTTTTGCGAATGTTGCGATGGC
TGATTTAGCTACATTTGTACAAGAACATAGTAAAAATGTTACTTATATTTTTATACAGAAGCATGGCAATATGTATGAAT
GCTCATTATTGTGTGACTGTCATAAGCTGATTGGCCAAGAGAAAGTAGACTCTCTCTATTTACTGCCATCAAATATTTCT
TACTCTGGTCCGACAAATAGAACTCTGCAGGTATGAGCAATGGCGGAGCTCATTGTTGGTTCTGCGTTACATGACAATCA
AATATCTATTACATGCAAGTCATCACTTCCAAGACAAAAGCAAGATCAAACTGTACACAATACAATGGGTCTACATATGT
ACTACCAACAGACGTATAACCTTCCAAGACTGAGATAACAATATTGAACACAAACGTATGATATACTGTGCATCCACATA
TGAACAACATTTTTTTTGTGATTAAGTTCACAAAAGATATATAAGAGCAACAACACATGTTGAGCACAGAAATTCCCATA
ACTTAAATCATCAAGCATACATAAGAGACGTTAAGGTAAGAAGGAACCAAGCACAAAACTGCTAACCGAAGGACAAATGT
GCATATGAAGCTAAAAATGGCAGTTATCTCACATGGCAAAAATTAAAATCAATTACCCTGGGAATCTGCACCAGGTCATA
TATCTCTCTAGGACAGGCCAACAAAAGAATTAAGGAAGCAATTCAGAACCAGGAAAGGTAGCAGGAAGCTCGGACTCCTT
CAAAATAAATCCATATTACAAAGAAAATGACGGGGTGTACTCTGCATTGCCTAAGAATAAGAAACTGACTTGACGATCCA
CACACATTGATGTGGCCGCACTCATCATGGATGATCCACCACTCGTTGGAAGCACACGTGCATACAATTTTAAGGAAGGG
CTCAACAAAGACAAATAATCTGAGTGAATACAGAATACCCAATATAGACCATATCCACCGAGACTATGGATGAATCATAA
ATCTATATAAAAAAGGCTCGAAAAACAACACTGACCATAGTTTTAGAAGTTCAGATCAGATGTAAAACTCACCATCAAAG
TGGACCTG
>chr3B_1186
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-----------------------------------------------------------------ATCATCGTCTATGAT
GGTAAGCGTGGACAGATCATCTACACACAAAGCAGCAACCAGGCCGGCAAGAGGGCGTCTCTCAGACCTTCAAATTCTGG
CACTCAGGTCAGCAGTTCTGCATGTCAATAGTAAGACAAATGTGTGAAGTATAGGACATGCCATTTTGCTTTCAGATGAT
ATCATATGCCTGGAGTTTGATTCCAGCATATATTTCATCCCTGCTTAACAGCATGAATCGGCCCAGCGCCCATCTGTTTC
AAAAAAAGGGTATTAGATAAATAGATAAGGTGAATGCAAAATTTGACAAAATTCCATCTGTCACTATGATTAAACAGAAT
GCCAACAATCACTGCCCGCTTCTGCTAACGGGGCCATATCGAGTGATCTCGCTGGACGGGTGCGTTGTCCTAGAGTACAA
TATTGATGAT---TGCCATGCTGAGATACTTCTGGACATAGATGATCCATCCACAAAATATAATGAAGCTGTCACAGAGG
AACTGGGCTGTACGTGCAATAACCACCCCAGAGCAGTGGTTACATACGCTCTTCTGAGCAACGCGGTGGAAGCTATTGTT
GAGGTGAAGCTTCACCAGCAACGAGAGAATACTTTCTACGGGAGGATCATTGCTCGAAGTTATCTAGGTGAGGTCGTGCT
ATTCGAATCAAACAATGAGAGCATGCACATCGGGTCGTCACAAGAACCAACAACCATACCACTGTCTAGATCAGTTCTTG
CCGTGCCGTTGGACTCATCCCTACAGATCGAAGTAGATCTACAGAATCACTCCAATGGTAAGATCGTGAAAGGCCTCGCG
ACATGCCAGGCCGACCTCAACAACTATCATGTGTTGCACCTCGATGGGGAGGACGGTCAGGTAGATGTGAAGATCACATG
GTCAGACTAAATGACTATACTGAGGGTGTACTTTCGTCTG-TGTCTCTACAGTTTGTG----------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S---
--------S--S--------------------SS---------S--S--S---S-SS----S-SS--S------------
----------S--SS-SSSS----S--S----------SSSS-------SS--S---------S----------S-----
--SSSS---S--S----SSS-SS-SS----------S-----------S---------S----S--SS--SSSS-SSS-S
S--SSSSS-SSSSS-SS-SSSS----SSSSSSS--------------------S---SSSS----S--------------
-SS-S----S-SS---S---------S-----S--S--------------SS----S---------S--S-S--------
---S------SSS---------S----------S-----S------------------S--S----S--S-------SS-
-------S--------SS------------S---------S--S-----------------------S-----S------
-----------S-----S-S------S-----------S----S----------SSS--------------S--------
S--S---S--S---------SS-SS-S---S--------------S--S--S-SS--S---S-SS-------S-------
-------S-----S--S-----------S-----S------SS------S----------------------------S-
S-S--S------S----S----S-S--------S-------S---------S-S--------S-----------------
-----------SSS--S-----S--------------SSSS---S-S-----------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_175
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---------------------------------------------------------------------------TCCTT
TTCTGACGGGTCGTG-----------------------------------------------------------------
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>reverse_1137
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----------------GGAGGTGTTGTCGGTACGTT--------------------------------------------
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>forward_781
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-----------------------------------------TGAGACTGGACGGATGGAGT-------------------
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>reverse_2034
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---------------------------------GTGCACCTTGATGGGGAGAA---------------------------
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>forward_1209
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---------------------------------------------------------------------TCGTCTACGAT
GGTAAGCGC-----------------------------------------------------------------------
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>reverse_2993
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--------------------------------GGGTGTACTCTGCATTGCCT----------------------------
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