>input_sequence_56016
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-----------------------------------------------------------ATGTCGACACCATTGATCGTA
TTTTTCAGTACAACATTGCCGTGGCTGCTCACAGAC--AAGGTCCTGAGTGCGAGGAATCCCGAGATCCCCATCCGCAAG
CTGAGGGTCAGGTTCTGTTTGAGGCCTGATGAATGTCTCTCCATCAGTCAAGCCGTCGCCCGCGCCATGGCAACCCACAA
GAAGCTCGACGTTGCTGAGTTTGTGGTCCTCACGGAGAAGATTTGTATGAAATGCACTGAAGACCATCTACTCTGCTATG
--CCAAGCGCTTCAATACTTGGATTGGTGATTGTCCAGTTGTGTTTGCTGGTCTCACACATCTGTGGCTGCGCAATTTGA
GGTTTGGTGAACTGGACATCCCCAATATCCTCACCACCTGCAAGCGGTTGGAATCTCTGCGTCTCACCTATTGTGACGCA
GGGGTCTGTTCCGTGCTTCAAGTAGAACATGCTCAACTTGTTGAACTCCACATCGACTATGGGGAATTTGAAGCAGTCCA
TCTCAACTGCCTACCGAAACTCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGGTTCTG
TCCCGCAGCTTTCAAAGCTAACCCTCGAACAAGTTGGTGTTAACTCGACTAGTCATATCCAGTTAAGTCAGCTCCTTGCT
AATGTACCCTGGATAAGCGACCTCCGTCTTGATTTTAAAAGTGAAAAGGTACTCACTAACCGCCATCTATATATGTTTCA
TTTCTT--TTAATTGCTTATAATAGTAAATACTCCCTCCGTCAGGAAATACTTGTCCATTTCTCGGACAAGTATTTCCGG
ATGGAGGGAGTACTAACTTAAGTGACTCT-TTTTCTAGCTCTTGAGGCTGTAATGTAATTTATTTGCACAATTG------
TTATTAATTTGCTTCTTGTGTGCCATGCTAGATTTGGGTTCTACCTGAACACCCCAAACTGCTTGCGCCTGTGCTTGGCA
AGCTACAGATTGTGAATCTGGGTAATCTTCCTCAAGGATGCGATATTGCTTGGACCATGTTCATTCTTGAAGCTGCAAGC
TCCCTAAAGGAGCTATGCATCACGGTGTGGGATCATTGGTGCAAAATGGAGACAGACAAGGATGTCCGTAAGGAACTTGG
TTACTGTGAGAAAGCAAATGTGGAGTGGCAAACTGGCAACCATCCACAGTTCATTTTAAGCACAAGAATCTGGTTAAGCT
CACCGTCTACGGCTTCCAACCTGAGGACAACTTTGTGCGATACGTTAGGCGCATGA------------------------
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>chr3B_1_TraesCS3B01G310200
TCGATAAAATATGAAACTACTTCTCATAATGAATCAAATGATATAAATTTTGTATTATGAATATTCATATATTTTTCTAA
AAATTCGGTCAAATATGCACTCGTACGTTCGAAAAAACAAATACACCTTATATAAAGGAAATAAAGGGAGTATATAAATA
GCCTCATTAGAAG-------------------------------------------------------------------
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----------------------AGAAACCCTAACTGACCCGATCACCTTTTGGCAGGCCGCCGCCAGCTCAGGTCTCCTC
GACCGCGGCGCCGGCGACAACCACTCGCCGCCGC--GCCCTTGTCTCCTCCGTCCAGGGGTATGTCCTTTTGTTGGGCTC
ACGGGATTCCTTGC----GTGATCTTGCTAGAAAGGAAGGGGGTCGATTTCGGTCTGTATTCAGATCCCAAGCGGACTCC
AAAAGGAGCCCTTTCTATTCAATCCTCATCCTGAGGGAGATGCTCTAATCAGGATCGGAACTGGAATTCCTGCCATAAAT
CCATAGATAAAAAGGCAGGCCTTCCTTTGTGTAATAGAGAGGAGAAAATGAGCTAGCAAAGTTTGTTTATGTCCCGAGAT
GTAGTTATTAATC---AGGATGTGATCGAGTCGTCCAATTGTTGTGCCACCGTTGTTAGCGGACTAGCCGCAGGAGATTT
CGACTTCTTTAATCCATCTAATAAGGCTATCCCTGGCCAATGGGAGAATTTGC-GGAGATGGAAAACAATAATGTAAGTT
TTTTCCTCTATATATATATGCTTTCTCCTCCTTTGTTCATGTCCACGAGGCTCATTTTCTTTCCTTGATTAATGTGATGC
AGAAAGCCACAGCTCGCCGCCGTGAAGCAGCTTCTGCCGAAGCCGAAGTTGATAGGCTTAGCAAGCTGCCCGATCACATT
CTACTCAACATCCTGGAGAGGGTTGGCACGCTAGATGCCTTGAGAACCTGCATCCTCTCCAAGAGAATGCTCAAGCTTCC
CCTCATGCTCTCGCTGCTTAACATAGACATTGGTTCCCTTGCGCGTTACATCAAGCCCAATGTCGACACCATTGATCGTA
TTTTTCAGTACAACATTGCCGTGGCTGCTCACAGAC--AAGGTCCTGAGTGCGAGGAATCCCGAGATCCCCATCCGCAAG
CTGAGGGTCAGGTTCTGTTTGAGGCCTGATGAATGTCTCTCCATCAGTCAAGCCGTCGCCCGCGCCATGGCAACCCACAA
GAAGCTCGACGTTGCTGAGTTTGTGGTCCTCACGGAGAAGATTTGTATGAAATGCACTGAAGACCATCTACTCTGCTATG
--CCAAGCGCTTCAATACTTGGATTGGTGATTGTCCAGTTGTGTTTGCTGGTCTCACACATCTGTGGCTGCGCAATTTGA
GGTTTGGTGAACTGGACATCCCCAATATCCTCACCACCTGCAAGCGGTTGGAATCTCTGCGTCTCACCTATTGTGACGCA
GGGGTCTGTTCCGTGCTTCAAGTAGAACATGCTCAACTTGTTGAACTCCACATCGACTATGGGGAATTTGAAGCAGTCCA
TCTCAACTGCCTACCGAAACTCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGGTTCTG
TCCCGCAGCTTTCAAAGCTAACCCTCGAACAAGTTGGTGTTAACTCGACTAGTCATATCCAGTTAAGTCAGCTCCTTGCT
AATGTACCCTGGATAAGCGACCTCCGTCTTGATTTTAAAAGTGAAAAGGTACTCACTAACCGCCATCTATATATGTTTCA
TTTCTT--TTAATTGCTTATAATAGTAAATACTCCCTCCGTCAGGAAATACTTGTCCATTTCTCGGACAAGTATTTCCGG
ATGGAGGGAGTACTAACTTAAGTGACTCT-TTTTCTAGCTCTTGAGGCTGTAATGTAATTTATTTGCACAATTG------
TTATTAATTTGCTTCTTGTGTGCCATGCTAGATTTGGGTTCTACCTGAACACCCCAAACTGCTTGCGCCTGTGCTTGGCA
AGCTACAGATTGTGAATCTGGGTAATCTTCCTCAAGGATGCGATATTGCTTGGACCATGTTCATTCTTGAAGCTGCAAGC
TCCCTAAAGGAGCTATGCATCACGGTGTGGGATCATTGGTGCAAAATGGAGACAGACAAGGATGTCCGTAAGGAACTTGG
TTACTGTGAGAAAGCAAATGTGGAGTGGCAAACTGGCAACCATCCACAGTTCATTTTAAGCACAAGAATCTGGTTAAGCT
CACCGTCTACGGCTTCCAACCTGAGGACAACTTTGTGCGATACGTTAGGCGCATGATGGAAATTGCAGTGAACATGAAGG
AGATATCTCTGTACGATTGGAAGGTGTGTAAGCGCTGCAGGGACTTGGATCCCAGTATCAAGGCCTGTCCTTCTCAGTAT
CCACGGACCAGTGAGGAGAAGGATATGTTGAGGGAGGAGATCACTAAGGAGTTGCCGATGGCTTCGCCTGCCATGATTCA
CTTCAGGTCCTAATTAATAATTGAAGAATAAGATGCATGGCGTCATCACTAAAATCTAGAGTCCATGT---------AAA
TCATTAATGGCATATATACTCTAATTTATCATCTATGTAGCTGCAAGGAGTTCCTGTGGTCCCTCCATAATTCAGTAGTC
ACTGCATTTGTATTCTTATTTATTTATCCCTCAACTGTAGCCTGTACTGATGCCTTAGGGCGAAAATAATTGTTAATAAA
TGTTTTGAATATCATGATA-TTTATCTGTGGCATCTCTTACAAGTTTGATAGG--TTTTTAGAGAAATTTATCTTACAAG
TTGTAAACCAACTGATGCACTTGTGTTTTCTGTTTGCTCTATGTTATACC----CATTATGGCTACGGTGTTCAAATGTG
T-----TAGCCTGATGCGTACTAAGTCCTTTTTACTTGTAGTTGACCCAGCCAGACCTCAGATCTCCATTCACAAAACAT
GTGGTGAAGTGCAGTACTGGCATGAGAAAAGTTTGTTAGATCTATGTCAGAAGTCAGAACCATGCTTAACTCCTGAGGTG
TTTTTTTCCTAGCTTTATTATTACTATAGTTGTGTGGAGTGCTGCTGCATGTGTTTATCACTTATTTTCCTACAGTAGCA
TGAATATGTTTTTCTCTGGGTCTTAGGTAGAAATGTTGTGTGTGCCTCATTATTGTCATCTTGGTTTTTTCTATTTTCGA
GGATTGTGTTGTACTATCAGTCATATTCCTTTCGGTAAATTACACTTTGGATCAGGTATTTTGACCCGCGTTGCAGTTCT
GCCACTGCACTTTTGATTTGCAAGTACAGGTAAGACG
>chr2D_169
TGTACTGATGCCTTAGGGTGAAAATAGTTATTAATAACTGTTTAGACTATCATGATATTTATCTGTGGTACCTCTTACAA
GTTTGATAGGTTTTTGGAGAAGTTTATCTTACAAGTTGTAAACCAACTGATGCACTTGCGTTTTCTGCTTGGTTTATGTT
ATACCAGTCCATTATGGCTACGGTGTTCAAATATGTTACCCTGATACGTACCAAGTCCTTTTTACTTGTGGTTGACCCAG
CCAGACCTCAGGTCTCCAATGTTCAGATGTATACCCTGACATATCCAGTATATATATCTACAATGTTCAAATGGTTGAAA
GGTTTGCTTAAAGTGTTTTTTTGCTGGAAAGTATAAACTTTGTTGCTTTCGACTAAGTTCTTTCAATTTTATAAGTGGTA
AAGATTAAATTTAGCTCTGCATAAGCAAACCTTTTCTTGTTTCCCGGCTGATTTGAGCAATCAGCACTCCACACAGTGTC
AAGTTTGAAGTGAGCGTCTAGTGAAATTCAGTTGTTTGCATCTTTTTCAGTTTGTACAACTTCTCTTATCAGCTGTTCTA
TCCCTCCAGCATATCTGTCCTGTTAATAATGATGGGCGCTCCATACTATAGAATTGGAAAAGAGTTCTAGTAGTGTCCTC
GAACATCCTTTTGGACGCGTGCTCAGTCCTGGTCAGGAAACTTTTAGTGCAATATACCAATGATGATTACGATGTGTTGC
ACTTGATTCTTATATACGTCGATCTGATATATACGTCGATATGATATATACTTGACCATACTCATTCCGTCCTGCTCTGT
TTTTTTCTTTTTGCGGATGATCCTGCTCTGTTTTTTGTTCAATGATCACTCATCATTCACTAAATTATATCTGGCAATCC
AGCTCTTCGGCAAGGGAAACCGGGATTTGGTTCACTTCAACATGGACATAGGTCAAATCCGGGTCGACTACGCCATGAAC
GCCTTCAGTCGCAAGACCTTGTACTTTAGCATCAACAGTGGTTGTTCAGGCTCATAATAGATCATCAAAGGTACATAGCT
GGCATAACATAGTTACAAGCCATAACATGAGATCGCCTCTCCATAGCTTTCCATTCCAACATGCCTCGACGCAACAAGCT
GGTGCCCGAGGCATTCGAAGGCTGTACAGTCAAGATTGTTGTTGTCTTCTGCTGGATGCTGAAACAGACAAGACAAGCCG
TGAGATGACAAGTGCAGAGAGCAGAGTTGTGGCTTGCGGAAAATCTGAGATTCTCAAAAAGTAAATTGGTATATGTGGTT
GTCGAGAAGACATTCGAATATGGCATACACCAAGGAAAATGCTTTGTACGCGAATATTTAAAAAATATGGCTCCGGAACT
ACTTTGTAGGTCAGTGTTATCGTATATTATATTTAATATATAAATACGTATTAGTTAAGACATGATTTTCGTATGTATTC
ATCTCAACAATCATACATAGCTACTAAAACAAATTTAAACAATCATCTAATAATATTTCATATGTGAGTATTATTACATA
GACACAAAATCCTATGCAAGCATGATTTACAATACAAATCAACAACTCACATTTTCCCCAATGATTACAACTCATCTACA
AAGCCTAAATCACCCCCACATTATTTCAATTTCTCATAGAAAATTTGAATCCATAAAAAACTAGGGTTTCACCCAAGGAT
AAATAATGGGAAGGATTTTTCAGATGAAAAGGAGGGAAGCAGAGTAGAACTTCTGGGAGGGATTATGGTCGAAATCCACA
GAGGAAAAAAAACAAACTTCTGAGAGGGATTATGGTCGAAATTCACAGAGGAAAAAAACAAAGCCTAAATTCACAGGGGA
GAGGAAATCGCGGCCACCCCTCTCAGCCTCTTTGTTCGTGGAAGGGGTGTGTGGGTTGGTGGGAGGGATGGCTCGCGCCG
GTTACTAAGTGGCAGTATAGCGCCCGACAAAGAGGTGCCATGCAGGTAGGATAGTGCCCGAGCCTTGGGCGCTACTTAGC
CAAAGGCGCGGCCCATCATGGCCTCGTGACGCCACACTGGCAAAGGCGTGTAGCGCCCGTCAGAACGGCGCTACGGCACA
AAGCATAGCATCTACGCGTTGGACGTTGCCCGAAAGGGTAGCTCCACCTTTGGGTTATTCTTGTCCATTTTGCCCATGTG
CACACTGTTTATTCATTCGTGGATAAAATGTTTGACCTAACTATTTGTAGCAAAAGGTTATATTTTGCCATTTTTGATGC
GGATGAGTGTCCGAAAGGTAATAAAGGAAAGTTGTTGCAAAATAGCCCTAATTTGGGTTATTTTCTTCAAATTTTCGGCC
TAGCATATTTTTGGGCAAGTTTTTTTTTTTTTGAGTAACTAGAAACCAGGTATCCATGGGTCGAATCCAGCCCAGAAAAG
GGTAAAGCCCAGACCGAACTGAATTAACAACGTTTAGCCCGTTTCATCCAATCAGTGCCAGCCCAAAAAAGGCCATGTTG
TGAAAAAAATAGCAATCCCTCAAAAAGGAAAAATAGCACGGCCCATTAACGTTCTGTAATGTATGTAATATACGAGTATA
AGAGAAGAGAAGAGAAGAGAAGAGAAACCCTAACTGACCCGATCCCCTTTGGGCAGGCCGCCGCCGCCGCCGC-------
-----CGCCGGCGGCGACAACCACTCCCCGCCGCCGGCCCTTGCCTCCTCCGTCCAGGGGTATGTCC-----TTGGGCTC
ACGGGATTCCTTCCTTGTGTAATCGTGCTAGAAAGGAAGTGGCTCGATTTCCGTCTGGATTCAGATCCCAAGCGGACTCC
AAAAGGAACTCTATTTATTTATTAG-------------------------------------------------------
-----------------------------------------------------TAGCAAAGTTTGTTTGTGACCCGAGAT
ATTGTTAGTAATCATTAGGATGTGATCGAGTCCTCCTATTCGTGTGCTGCCCTTGTTAGCGGACTAGCCGCAGCAGATTT
CGACTTCTTTGATCCATCTATAATAA--------GGCCAATTGGAGATTTTGC-GGAGATGGAAAACAATAATGTAAGCG
CCTTTTTTCTTTC----ATGTTTTCTCCTCCTTTGTTCATGTCCACGAGGCTCATTTTCTTTCCTTGGTTAATGTGATGA
TGCAGAAA---------------------------GCCGAAGCCCAACTTGACAGTCTTAGCAAGCTGCCGGATCACCTT
CTACTCAACATATTGGAGAGGGTTGAAACGCTAGATGCCTTGAGAACCTGCATCCTGTCTAAGAGGATGCTAAAGCTTCC
CCCCATGCTGTCGCTGCTTGATATAGATATTGGTTCCCTTGCGCGTTACCTCAAGCCCGATGTCGACACCTTTAATCGTA
TTTTTCAGTACAACATTGCTGTGGCTGCTACCACGGACAAGATACTTGGTGCGAGGAATCCCGAGATCCCCATCCGCGAG
CTGAGGGTCAGGTTCTGTTTGAGGCATGATGAGTGTCTCTCCATCAGCCAAGCTGTTGCCCGCACCATGGCAACCCAC--
-AAGCTCGATGTCGCTGAGTTTGTCGTCCTCACGGAGAAGACTAGTTGGAGATGCACTCAACATGATCTCCTCTCCTTTG
--CCAAGCGGTTCAATACTTGGTTTGGTGATTGTCCAGTTGTGTTTGCTGGTCTCACGCACCTGTGGCTGCGGAATTTGA
GGTTTGGTGAACTGGACATCCACAACATCCTCAACACCTGCAAGCGCTTGGAATCTCTGCGTCTCACCCATTGTGACGCA
GGGGTCCGCTCCGTGCTTCAAGTACAGCATGCTCAACTTGTTGCGCTCCAGATCGACTATGGGGAATTTGAAGCCATCCA
ACTCAACTGTCTACCAAAACTCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGGTTCTG
TCCCGCAGCTTTCAAAGCTAATCCTTGGAAATGTTGGTGTTAGTTCGACTAGTAATATTCAGTTAAGTCAGCTCCTTGCT
AATGTACCCTGGATAACTGACCTGCGTCTGGATTTTCAAAGTGAAAAGGTACTCACTA---GTCATCCATATATGTCTTA
TTCC-TATTTATGTGCTTATAATAGTAA----------------------------------------------------
----------TATTAACTTAACTGAGTCCCTTTTCTAGCTCTTGAGGGTGTAATGTAATTTGTTTGCAGTTTGTACACAA
TTATTAATTTGCTTCTGCT-----GTGCCAGATTTGGGTTTTACCTGAGTGCCCTAAACTGCTTGCACCTGTGCTTGGCA
AGCTACAGATTGTGAATCTGGATAATCTTCCTCAAGGATGCAATATTGATTGGACCATGTTCATTCTTGAAGCTGCAAGC
TCCCTAAAGGAGCTATGCATCACGGTGTGGGATCATTGGTGTGAAATGGAGACAAACAAGGATGTTCGAAGGAAAAAGGG
TTACTGTGAGAAAGCAAACGTGGAGTGGCAACCATCTGCT--------GTTCATTTTAAGCACAAGAATCTGGTTAAGCT
CACCATCTGCGGCTTCCAACCTGAGGAGAACTTTGTGCGGTACATTAGGCGTGTCATGGAAATCGCGGTGAACATGAAGG
AGATATCTCTGTACGACTGGCAGGTGTGCGAGGACTGCGGTGACTTGGATCCCAATATCAAGGTCTGTCCTTCTCGGTAT
CCACGGACCACTGAGGAGAAGGATATGTTGAGGGAGGAGATTACTAAGGAGTTGCCGATGGCTTCGCCTGCTGTGATTCA
CTTCAGGTCCTAATTAATAATTGAAGAATAAGATGCATGGTGTCATCAGTAAAATCTAGATTCCATGT---------AA-
TCATTCATGGCATATGTACTCTTATTTCTCGGCTATGTAGCTGCAAGGAGCTTCTGTGCTCGCTCCATAATTCAGTAGTC
-CTGTATTTGTATTATTATTTATTTATCCCTCAACTGAAGCTTGTACTGATGCCTTAGGGCGAAAATAGTTATTAATAAA
TGTTT---------------------------------------------------------------------------
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>chr5A_519
TAGCAAA-------------------------------------------------------------------------
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----------------------------------------------------------------GTTTGTGTCACGAGAT
ATAGTCAGTAATCATTAGGATGTGATT-----CTCCTATTCTTGTGCTGCCCTTGTTAGCGGACTAGCCGCAGGAGGTTT
CGACTTCTTTGATCCATCTAATGAGGCTATCCCTGGCCAATGAGGGACTTTGCGGGAGATGGAAAACAATAATGTAAGTG
TCTTTTTT-TTTC----ATGTTTTCTCCTCCTTTGTTCATGCCCATGAGGCTCATTTTCTTTCCTTGATTAATGCGATGC
AGAAAGCCAAAGCTCGCTGCCACGAAGCAGCTTCGGATGAAGCTGAAGTTGATAGGCTTAGCAAGCTGCCAGATCACGTT
CTACTCAACATCCTGGAGAGGGTTCGCACGATAGATGCCTTGAGAACCTGCATCCTCTCTAAGAGAATGCTCAAGCTTCC
CCCCATGCTCTCGCTGCTTGATATAGACATTGGTTCCCTTGCGCGTTACATCAAGCCCAAGGTCGACACCACTAATCGTA
TTTTTCAGTACAACACTGCTGTGGCTGCTATCATTGAGAAGGTCCTGAGTGTGAGGAATCCTGAGATCCCCATCCGCAAA
CTGAGGGTCAGGTTCTGTTTGAGGCCTGATGAATGTCTCTCCATCAGCCAAGTCGTCGCCCATGCCATGGCAACCCAA--
-AAGCTCGATGTTGCTGAGTTTGTGGTCCTCACGGAGACGATTTGTTTGAAATGCACTGAAGACCATCTCCTCTGTTATG
CCCCAAGCGCTTCAATAGTTGGCTTGGTGATTGTCCTGCCATGTTTGCTGGTCTCACGCGCCTGTGGCTGCGCAATATGA
GGTTTGGTGAACTGGACATCCCCAACATCCTCAGCGCCTGTAAGAGGTTGGAATCACTGCGTCTCTCCTATTGTGACGCA
GGGGTCCAATCTGTGCTTCAAGTAGAACATGCTCAACTTGTTGAGCTCCACATCGACTATGGGGAATTTGAAGCAGTCCA
ACTCAGCTGTCTACCAAAACTCCAACGTGTCAAATATGTTGGTTGGTCTTACCAAGAAGATCCCCTGATTTTTGTTTCTG
TCCCGCAGCTTTCAAAGCTAACACTCGAAAAAGATGGTGTTAGCTCAACTAGTAATCTCCAGTTAAGTCAGCTCCTTGCT
AATGTACCCTGGATAAGCGACCTCCATCTGGATTTTAGAAGTGAAAAGGTACTCAGTAGCCGCCACCTATGTATGTCTCA
TTCC-T--TTAATTGCTTATAATAGTACT---------------------------------------------------
----------TACAAACTTATGTTAGTCA--TTTCTAGCTCTTGAGGGTGTGATGTAATTTGTTTGCCCAATTG------
TTATTAATTTGCTTCTTGTGTGCCGTGCCAGATTTGGGTTCTACCTGAATGCCCCAGACTGCTTGTGCATGTGCTTGGCA
AGCTACAGATTGTGAATCTGGACAATCTTCCGCAAGGATGTGATATCGCTTGGACCATGTTCATTCTTGAAGCGGCAAGC
TCCCTAAAGGAGCTATGCGTCACGGTGTGGGATCATTTGTGCAAAATGGAGACAGACGAGGATGTCCGTAAGGAACTTGG
TTACTGTGAGAAAGCAAATGTGGAGTACCAACCATCTAT--------AGTTCATTTTAAGCACAAGAATCTGATTAAGCT
CACCGTTTACGGCTTCCAACCTGAGGACAACTTTGTGCGATACGTTAGGCGTGTCATGGAGATTGCAGTGAACCTGAAGG
AGATATCTCTGTATGACTGGCAGGTCTGTAAGCGCTGCAGGGACTTGGATCCCAGTATCAAGGTCTGTCCTTCTCGGTAT
CCACGGACCAGTGAGCAGAAGGATATGTTGAGGGTGGAGATTACTAAGGAGTTGGTCATGGCTTCGCCTGCTGTGATTCA
CTTCAGGTCCTAATTAATAATTGAAAAATAAGATGCATGGCGTCATCAGTAAAATCTAGAGTCCATCTGTCCATGTAAA-
TCATTCATGGCATATGTACTCTTATTTATCGTCTATGTAGTTTCAAGGAGCTTCGGTGCTCTCTCCATAATTCAGTAGTC
ACTGCATTTGTATTCTTATTTATTTATCCCTCAACCGAAGCTTGTACTGATGCCTTAGGGCAAAAATAGTTATTAATAAA
TGTTTTGAATATCATGATAA-TTATCTATGCCACCTCTTACAAGTTTGATAGG--TTTTTGGAGAAATTTATCTTACAAG
TTGTAAAGCAACTGACGCACTTGTGTTTTCTGCTTGGTCTATGTTATACG----CATTATGGGTACGGTGTTCAAATGTG
T-----TAGCCTGATGCATACTAAGTCC---TTACTTGTGGTTGACCCAGCCAGACCTCAGGTCTCCA------------
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>chr5B_827
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---------------------------------------------AAGTTGACAGTCTTAGCAAGCTGCCGGATCACCTT
CTACTCAACATATTGGAGAGGGTTGAAACACTAGATGCCTTGAGAGCCTGCATCCTGTCTAACAGGATGCTCAAGCTTCC
CCCCATGATGTCGCTACTTGATATAGATATTGGTTA-------------CTCAAGCCCGATGTCGACACCTTTAATCGTA
TTTTTCACTACAACATTGTTGTGGCTGCTATCACGGACACGATACTTGGTGCAAGGAAACCCGAGATCCCCATCCGCAAG
--------------CTGTTTGAGGCATGATGAGTGTCTCTCCATCAGCCAAGTCGTCGCCCGCACCATGGCGACCCAGAA
GAAGCTCGACATCGCTGAGTTTGTCGTCCTCACGGAGAAGACTAGTTGGAGAGGCACTCAACATGATCTCCTCTCCTTTG
--CCAAACGGTTCAATACTTAGTTTGGTGATTGCTCACTTGTGTTTGCTGTTCTCACGCACCTGTGGCTGCGCAATTTGA
GGTTTGGTCAACTGGACATCCACAACATGCTCAACACCTGCAAGCGCTTGGAATCTCTGCGTCTCACCCATTGTGACGCA
GGGGTCTGCTCCGTGCTTCAAGTACAACATGCTCAACTTGTTGCGCTCCACATCGACTATGGGGAATTTGAAGCCATCCA
ACTCAACTGTTTACCGAAACTCCAACGTGTCAAATATGTTG---------------------------------------
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>chr5D_2106
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---------------------------------------------------------AAGGATGTTCGAAGGAAACAGTG
ATACTGTCAGAAAGCAAACGTGGAGTGGCGACCATCCGCTA--------TTCGTTTTAAGCACAAGAGTCTGGTTAAGCT
CACCATCTTCGACTTTCAACCTGAGGAGAACTTTGTGCGATACGATAGGCGCGTCATGGAAATTGCGGTGAGCATGAAGG
AGATATATCTGCATGACTGGCAGGTGTGCGAGGACTGCGGGTACTTGGATCCCAATATCAAGGTTTGTCCTTCTCGGTAT
CCGCGGACCAGCGAGGAGAAGGATATGTTGAGGGAGGAGATTACTAAGGAGTTGCAGATGGCTTCGCCTGCTATGATTCA
CTTTAGGTCCTCATTAATCTAGAGTCCATTTAAA--------TCATCACTAAAATCT-----------------------
--------------TGTACTCTTATTTATCGTCTATGTAGCTGCAAGGATCTTCTATGCTCGCTCCATAATTCAGTAGTC
ACTTCATTTGTATTCTTATTTATTTATCCCTCAACTCAAGCTTGTACTGATGCCTTAGGGTGAAAATAGTTATTAATAAC
TGTTGTGAATATCATGATCTTTTATCTGTGGCACCTCTTACGAGATTGATAGATTTTTTTGGAGAAGCTTATCTTGGAAG
TTATAAACCAACGGATGCACTTGTGTTTTCTGCTTGGTCTATGTTATACCAGTCCATTATGGCTATATGTATAGTGTTCA
GATATCTAGCCTGATGCATACCAAGTCCTTTTTGCTTGTGGTTGACCTAGCCCGACCTC---------------------
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>SNPs
-S--S---SSSSSS-SSSSSSSSSS-SSSSSS-SS--S--S-SSS-S-S-SS-SS---SS--S-SSSSSSSS-S--SS--
SSS-SSSSSSSSS-SS-SSSSSS-SSSS-SSS--SSSSS--SS--S--S--SS-SSS-SSS-SSSS-SSSSS-S--SS-S
SSSS--S-SS-SS-------------------------------------------------------------------
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--------------------------------------------S-----S--------------SS-S-S-SSSSSSSS
SSSSS--S--S---------------S----------------S-----------------------SSSSS--------
------------S-------S---S--------------S--S--------S-----S----------------------
-------S-S--S-S----S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S-----------
S------S------------------------S---S---S------SS--S----------------------------
----------S------------------------------------S-------------------------------S
-S--SS-SSS-SSSSSS---S-----------------------------------------------------------
---------S-------S---SS-----------S-----------------------------------S------S--
-----------------------------------------------------------S--------------------
--S----------------S-S---------------------------------------------------S------
-------------------S---------SS--SSS--------------------------------------------
-----------------------------------------------S--------------------------------
----------------------------------------------S----------------------S----------
----------------------S----------------------------------S--S-------------------
-------------------------S-------S----------------------------------------------
--------S-----------------------------------S-----------------------------------
S--------S----------------------------------------------------------------------
-----------------------------S------------S----------S--------------------------
-----------------------------S----------------------------S-----------------S---
--S-S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---------------S--S------------------S-------------S------------------
------------------------S---S--------------------SS-----------------------------
---------------------S----------------------------------------------------------
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-------------------------------S-SSS--SSSSSSSSS---------------------------------
----------------------------------------------------S-S-------------------------
----------------S---S------------------------------------------S-----------S----
-----------------------------------------S-----------------------------S--------
-------------------------------------------------------------------------------S
-----S---------S------S-------S-------------------S-S-----S--S------------------
-------------------------------------S---S--------------------------S--S--------
---------------------------------S--------------------------S-------------------
--------------------------------S---S-------------------------------------------
-----------------S---------------------S---------------------S------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2874
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TCGGAACTGGAATTCCTGCC------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_4737
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TTGGAAGGTGTGTAAGCGCT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
