>input_sequence_56004
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----------------------ATGGACGGCAGTAACTCCAATAAGAGGAGAGATGAAGCTCCGAGAGAGGGAGACCGCT
GGATGGACGTCAGAATACTGAAGGAGACCCTTGACTGCACAGTCTGCTTCGAGCACTTCAGGACTGAGATTTATCAGGTA
GATGCACTAAGTATATGTACATATTGACCTGT-TTTGAACA-CAAGCTTTTA-TTTCATTTCT------TATAAAGATCA
ACATAAGAGAAGACCTTTGACGAATTATCATTGTACGTA------------------------------------ACATA
ATAGCCATGGTAGCTGAAATAATGGAATGTGTAGCAGTAACCTATCTTCTTGATGC-----AGT---ATTCA--------
TTCTTTCTTATGTTAATAGTTATTCTCATGGGGACCCAATTAATCATTTCGTTTCCACAGTGTTCTGTTGGGCATTTCAT
ATGCTCGTCTTGCCGCGACAAGATACTGGACAAGAAGTGCCCCACATGCTCTATCAAAACTTCCTTCAAGCGCTGCTTTG
GGATGGAACATGTCGTCCAGTCGGTCGCATTTCCTTGCTCCAATGCCAAGTATGGATGCAGAGAGGGTCACGCATACTAT
CAGAAAGAAGGACATGAGCAGGTATGCCCGTATGGCCCATGCTTCTGCCCAGCGTCCGACTGCAGCTTCACTGGGCTGAC
ACACGAGCTCCTGGACCATCTCACCATCTATCACATGTCTCCATGTACAGACCTCCCATATCATGGGACGGTGGCTCTCC
GCTTAGAACCGGGCATACATGTTCTGGCACCCCGCAACAAGGGCAACAACCATTTTTTCATGCTCAACATGGAGCCAGAG
CGTCTTGGATATGCTATCTCAGTCGTCTGCGTCCAACCTAATGCTACGGAACCCAAGTTCACATGTAGTATGAGTTATGA
CTGCTCTGGGACAGGTTATTGTGGAAGTGCAAGTTGCCAAATAAAAAGCTCTACACTCTCTGATGGGCTACCGACGGACT
ACGACTTAATTCCACCCAAGAGAAAGATTTCTGGTGATCGAAAATTTATCATGCTCAGAATCACCATTCATCAAGCTTCA
AGTGTCAGCAAATCCCATGTTAAAGGAAAGGGCCTGACTTCCACTCCATTGACCCTGTTTCCTCGTCGTTCTGATGATGA
TGGCGATATAGTCTGCAGATCCTGTATTGAAGGAAAGTGCCCGACTTCCTCTCAAAAGCTACTGTTTCCTGATTATTCTT
CTGATGACGATGATGATGTGCCTTCAAGATTCGAGCGTGCTCTCAAACGGGTGTCCCTGCTTGATTAA------------
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>chr3A_1_TraesCS3A01G032200
TGTTCCAGGCTGCGGCTCTTAGCAAGTGTATTGA-TTATTTTTTTTGTATACACTTCTAATTTAATATAACAGCAATCTT
TTTTTTTCCTTCTGTTCCGTTGCAACGCGCGAACATTACACGGG--TAAAAGAAAAGTTGAATTCATCAAAGTACACTCA
AATACCGGGCCCATATCAGGCACAGCCCAGCCCATTATTT---------------------------AGCCTCGGCGCTC
CTTCCTCCCAAA---CCCAACCCTCGCTTCTCAGAGAAAGAGGGGGAAAAC-----------------------------
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-------------------CCAAACCCTTGCCGCCGTCGCCGGCGCTCTCGCTCCCTCCTCCGCTCCGCTTCTCCCGCTC
CCACCGGCCGGCATCGGATCGACGAGCGCGCTGTCCCATCCGAGAGCTCACCGGTAAGGGAGCAGTGGCCTCTTCTTCGA
CGGCG-------------------GCCTCG--------------------------------------------------
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--------------------------AGGCCGGCCATGGCGACTAGGTCTTGCAGCGGATAGACCCCGAGGCCACCAGGT
ACTAGTTCAGGTACGGCCGCGCTGCATCCCTCCCG---ATTCGGAACTTTCCTCCGTCGCCAGCGTCGCGTTGCTAATGC
C-AATGCCCAATTTTGAACCGGAATAAAGCCCTTCTTTTTACTGCTTCTCTGTCAGATTACTCGCATGTGCATCCTTAGT
TCGTCACTGTTCTTATTATTATCCCAGTAACGTGGCAATTCAGCTCAATATTTACTGTCCCGAAACAAGAGAAATAGCAG
ATGTGAAATCGTGGTACTCCACCACTCGATTAATTTGCCTGTCGTGTGTAA-----TTTGTGCTTGTGCTGTTGCTTTTC
CT-TTGCTAT--CTTGGCCCCAAACAATTACAG-TACCTTTCTAGCTTATTATGCCTAC-------CACACCAGTGTCAC
TTCCAAATCCATGAATTTTATCAGTATATCTTGTGGTCTTGTGGAACAGGCCGGAGAAAGGAGCGGTGG-----------
-----------------TTTCAGGTTTGGATCTTGGTTTCGGTCTGTAGT----ACCAG---------------------
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---------------------------------------------------CAGCAACCAGCAAGCAA-TTTAGTTCTGG
TACACTT-GAGTTTTGTTGGCGATGGACGGCAGTAACTCCAATAAGAGGAGAGATGAAGCTCCGAGAGAGGGAGACCGCT
GGATGGACGTCAGAATACTGAAGGAGACCCTTGACTGCACAGTCTGCTTCGAGCACTTCAGGACTGAGATTTATCAGGTA
GATGCACTAAGTATATGTACATATTGACCTGT-TTTGAACA-CAAGCTTTTA-TTTCATTTCT------TATAAAGATCA
ACATAAGAGAAGACCTTTGACGAATTATCATTGTACGTA------------------------------------ACATA
ATAGCCATGGTAGCTGAAATAATGGAATGTGTAGCAGTAACCTATCTTCTTGATGC-----AGT---ATTCA--------
TTCTTTCTTATGTTAATAGTTATTCTCATGGGGACCCAATTAATCATTTCGTTTCCACAGTGTTCTGTTGGGCATTTCAT
ATGCTCGTCTTGCCGCGACAAGATACTGGACAAGAAGTGCCCCACATGCTCTATCAAAACTTCCTTCAAGCGCTGCTTTG
GGATGGAACATGTCGTCCAGTCGGTCGCATTTCCTTGCTCCAATGCCAAGTATGGATGCAGAGAGGGTCACGCATACTAT
CAGAAAGAAGGACATGAGCAGGTATGCCCGTATGGCCCATGCTTCTGCCCAGCGTCCGACTGCAGCTTCACTGGGCTGAC
ACACGAGCTCCTGGACCATCTCACCATCTATCACATGTCTCCATGTACAGACCTCCCATATCATGGGACGGTGGCTCTCC
GCTTAGAACCGGGCATACATGTTCTGGCACCCCGCAACAAGGGCAACAACCATTTTTTCATGCTCAACATGGAGCCAGAG
CGTCTTGGATATGCTATCTCAGTCGTCTGCGTCCAACCTAATGCTACGGAACCCAAGTTCACATGTAGTATGAGTTATGA
CTGCTCTGGGACAGGTTATTGTGGAAGTGCAAGTTGCCAAATAAAAAGCTCTACACTCTCTGATGGGCTACCGACGGACT
ACGACTTAATTCCACCCAAGAGAAAGATTTCTGGTGATCGAAAATTTATCATGCTCAGAATCACCATTCATCAAGCTTCA
AGTGTCAGCAAATCCCATGTTAAAGGAAAGGGCCTGACTTCCACTCCATTGACCCTGTTTCCTCGTCGTTCTGATGATGA
TGGCGATATAGTCTGCAGATCCTGTATTGAAGGAAAGTGCCCGACTTCCTCTCAAAAGCTACTGTTTCCTGATTATTCTT
CTGATGACGATGATGATGTGCCTTCAAGATTCGAGCGTGCTCTCAAACGGGTGTCCCTGCTTGATTAATAGGCCGATTGA
TGATGTACCTTCAAGGTCCGATCGTGCTCATGTATGCTAGAGATTTAGCGTTGGTGTGTGGACGCCGTTAATAATATGCC
TGGGTGGGTTTCACCATTCTGGTTCCAGGATATATGTATGACGAGAACCTGTATGATCTGAGTATCGGAGCTGTTTTGAC
CTTCTTTATGTGTTTTGTTGTCCGGAACTCGTGCCGTGGCATGTGAGGCTGCCCTTGATGTACTAGAAAAATATTATGCT
ATGTCGGTACATTTGTATCGATGAACCACTAACTTGGAGTTATCCTGTTTTATAATCTTGCACCATAACAGTGATGCCCT
CTCTTTCAGTTTCTTTGTGCATTCATGAGTTCCCAATGTTGCATATATTGCATATATCGGCAATATCAATGAAATGAATT
GTCTTTCTGAATCATAGGAATATTTTTATTTACTTGTGTGCACAAAAACCAAGCTAGGCATAGTGATAATACTGCCAGGC
ACAATACTGCCTGC------------------------------------------------------------------
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-TACTATATGATGGCAAAATTGTAACAGGTTACCATGTCT----------------------------------------
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---------------------------------------------AGGATAAAGATCGTAAACTTTCTGAAGTCATTTAA
AGTAAGTTTATAGAGAGGATAGTAATCAGATTGTGAGGTTCTGCTGAAAGTCACAATCGCTTCAAGTTTGTATGATGTGG
CAATGTTGAAACTTAAAAAGCTCAAATACTACCTGATTAGGAGTTTTGAAACTAATTGCATTCCCTGAAATTGCAAAAAG
AAAAATGAATGTGAAATGAAGCAATTGTTTTTCTTTTTGCAATTAGGGATGGGAGAGTTGCTGGAACGTGGGGCCTGTGG
GTTGACTTACACTGTGCTAAAAAAGGCTTGCGCGTCACCTTGTGCGGCCATACCATCTCTAACAAACGGGTCCTGCCAGT
CAGGAACTCTATCAAAGTCCCATTAAGGGGTCGCTAGTGCTATTTGAAACAAAACTGTTTGGAGATTTTGTGTGTTTGTT
TGCAAAAATGATGGCTATGT
>chr3B_1
TGTTCT-GGCTATGGTTCTTAGGAAGTGCGTTGA-TTTTTTTT--TGTATACACTTCTAATCTAATACAACTGCAATATA
TTTTTATT------TTCCGTTGCAATGCGCGAACATTACACAGG--TAAAAGAAAAGTTGAATTCATCAAAGTT-----A
AATACCGGGCCCATATCAAGCACAGCCCAGCCAGAGGAAAAAAG--------------------AACAGCCTCCGCGCTC
CTTCCTCCCAAAAACCCAAACCCTCGCTTCTCAGAGCAAGAGGGGGAAAG------------------------------
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---------------AAAACCGAACCCCTGCCGCCGTCGCCGGCGCTCTCGCTCCCTCCTCCCCTCCGCTTCTCCCGCTC
CCACCGGCCGGCATCGGATCAACCAACGCGCTGTACCATCCGAGAGCTCACC--------------GGCCTCTTCTTCGA
CGGCGCCGCCATCAGGAGACGGCGACCTCG--------------------------------------------------
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--------------------------AGGCCGGCGATGGCGTCTAGGTCTTGCAGCGGATAGACCCCGAGGCCACCAGGT
ACTAGTTTAGGTACGGCCGCACTGCATCCCTCCTCCCAATTCGGAACTTTCCTCCGTCGTCGTAGTCGCATTGCTAATGC
C-AATGCCCAATTTCGAGCCGGAATAAAGCCCTTCTTTTTACTGCTTCTCTGTCAGATTACTCGCATGTGCATCCTTAGT
TCGTCACTCTTCTTATTATTATCCCAGTAACGTGGCAAATCGGCTCAATATTTACCGTCCCGAAACAAGATAAATAGCAG
ATGTGAAATCGTGGTACTCCACCACTGGATTAATTTGCCTGTAGTGTGTAA-----TTTGTGCTTGTGCTGTTGCTTTTC
CT-TTGCTATATCTTGGCCCAAAGCAATTACAGTTACCTTTCTAGCTTATTATGCCTAC-------CACACCAGTGTCAC
TTCCAAATCCATGACTTTTGTCAGTATATCTTGTGGTCTTGTGGAACAGGCCGGAGAAAGGAGCGGTGG-----------
-----------------TT-------TGGATCTTGGTTTCGGTCTGCAGTACGTACCAG---------------------
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---------------------------------------------------CAGCAAACAGCAAGCAA-TTTAGTTCGGG
TACACTT-GAGTTTTGTTGGCGATGGACGGCAGCAACTCCAACAAGAGAAGTGGCGAAGCTCCGAGAGAGGGAGACCGCT
GGATGGACGCCAGAATATTGAAGGACACCCTTGACTGCACAGTCTGCTTTGAGCACTTCAGCACTGAGATTTATCAGGTA
AATGCACTATGTATATGTACATATTGACCTGTCTTTGAACA-CAAGCTTTTA-TTTCATTTCT------TATAAACATCA
AGATAAGGGAAGAGTTTTAACGAATTGTCATT------------------------------------------------
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--------------------
>chr3D_1
TGTTCT-GGCTGCAGTTCTTAGCAAGTGCATTGATTATTTTTT--TGTACACATTTCTAATTTAATAGAACAGCAATCTT
TTTTT----TTCTGTTCCATTGCAACGCGCGAACATTACACAGG--TAAAAGAAAAGTTGAATTCATCAAAGTACACTCA
AATACCGGGCCCATATCAGGCACAGCCCAGCCCATTATTT---------------------------AGCCTCGGCGCTC
CTTCCTCCCAAA--CCCAAACCCTCGCTTCTGAGAGAGAGAGGGGAAAAAAAGGTGGCTGTTCGTAATGTATGAAGCTCT
CAACCAGGAGGATTTCCTTGCTTTTGTGGTCACCCTATGGGCGTTGTGGAGTTCACGAAGAAAGGCCATGTACGAGGATA
TTTTCCAAACACCTTTTGTTATCAACAGCTTTGTTACATCATACATAGCAGGACTAAAAGCACTACAGCAGTCTGGAGTG
GTCGGAAGGGGGCCGCCCCAACGCCGCCCAAATCATTGGATTGCACCTCCGGATGGGCTAGTCAAACTCAATGTAGACGC
AGCGGTGGGACGATCGCTTGGAGCAGTGGCAGCTGTCTGCAGAGATCGAGATGGTGTTTTCATGGGAGATTCGGCGGTGG
TTTTCCCCAACTTGTCAGATCCCGGCATTTTGGAGACACTCGCTATCAGGGAGGCACTGGCTTTATCTGATGATCTCTAC
GTCGGAAGGATCCATGTGGCATCGGATTGCAAGGTGGCCGTCGACGATATCCATCAGCAATATAAAGGGAGCTACGGTGC
AATTGTGCAGGAGATTTTGCAATATAAATCGTCTTTTGAAACTTGTAATATTGTTCATGAGTTTAGGAGCTCGAATATCG
AGGCTCACAAACTGGCAAAGCACGCTTTATCTCTCGGGACTGGCCGCCATGCTTGGTTAGGCCAGCCCAACGAACTTGAT
TTCGTCCCTGTAAACATTGTGACGATCTAATAAAGCTTTGCAGTTTGTCTAAAAAAAAAGCCCCCAAACCCTCGCTTATG
AGAGAGGGGGAAAAAAAAACCAAACCCTTACCGCCGTCGACGGCGCTCTCGCTCCCTCCTCCGCTCCGCTTCTCCCGCTC
CCACCGGTCGGCATCGGATCGACGAGCGTGCTGTCCCATCCGAGAGCTCACCGGTAAGGGAGCATCGGCCTCTTCTTCGA
CGGCG-------------------GCCTCG--------------------------------------------------
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--------------------------AGGCCGGCCATGGCGACTAGGTCTTGCAGCGGATAGACCCCGAGGCCACCAGGT
ACTAGTTCAGGTACGGCCGCACTGCATTCCTCCCTAG---TCGGAACTTTCCTCCGTCGTCGGAGTCGCATTGCTAATGC
CAAATGCCCAAATTTGAACCGGAATAAAGCCCTT----TTACTGCTTCTCTGTCAGATTACTCGCATGTGCATCCTTAGT
TCGTCGCTGCTCTTAATA-TATCCCAGTAATGACGCAAATCAGCTC----------------AAACAAGAGAAATTACAG
ATGTGAAATCGTAGTACTCCACCTCTCGATTAATTAGCCTGCTGTGTGTAAATTAAATTGTGCTTGTTTTGTTGCTTTTA
CG-TTGCTATATCTTGCCCCCGAACAATTACCTTTCTA---CTAGCTTATTATGCCTAC-------CACACCCGTGTCGC
TTCCAAATCCACGAGTTTTATCAGTATATCGTGTGGTCTTGTGGAACAGGCCGGAGAAAGGAGCGGTGG-----------
-----------------TT-------TGGATCTTGGTTTCGGTCTGCAGT----ACCAGCAGCAAACAGGGACGCGGATT
TTTACAGCTCAGATTTCTGGACACCCCTTATCCTTACCTTCCACCATTGTTTTAAGATCCGTGCTAGACAACTAACTTTG
TACATCAGATTTTCTCTTTTTTGTTTCTTCAAAATAAAACAACATATGAACTTCAAACTCTGCAAGACACCAAAACGTTC
TAACTAGAATGTGAGAAAAAACTTTGAGATTTTTTTGTTAAACATAAATATACGAAATTAGATTTTTTATTAAAAAATGT
ACTTTTTAGTATTTATATTGCATGAAAAATTCTAAAAGTTTTTTCCCACATTCTAGTAAGAATGTTTTGTTGATCTGCCA
AGTTTGAAGTTCATATGTTGTTCTATATGGGAGAAACAAAAAAGACAAATGTACTCGCACGAATCGCGATGCAAAAATGA
GTGGCTAGATAAGGGGGTGTAGGAAAGCCTATGCTTTCTCAAATGTTAACCCAGCAAACAGCAAGCAA-TTTAGTTCTCG
TACCCTT-GAGTTTTGTTGGCGATGGACGGAAGTAACTCCAATAAGAGGAGAGACGAAGCTCCGAGAGAGGGAGACCGCT
GGATGGACGTCAGAATACTGAAGGAGACCCTTGACTGCACAGTCTGCTTCGAGCACTTCAGGACTGAGATTTATCAGGTA
GATGCACTAAGTATATGTACATATTGACCTGT-TTTGAACA-CAAGCTTTTA-TTTCATTTCT------TATAAAGATCA
ACATAAGAGAAGACCTTTGACGAATTATCATTGTACGTA------------------------------------ACATA
ATAGCCATGGTAGCTGAAATAATGGAATGTGTAGCAGTAACCTATCTTCTTGCTGT-----AGTACTATTCA--------
TTTTTTCTTATGTTAATAGTTATTCTCATGGGGACCCAATTAATCATTTCGTTTCCACAGTGTTCTGTTGGGCATTTCAT
ATGCTCGTCTTGCCGCGACAAGATACTGGACAAGAAGTGCCCCACATGCTCTATCAAAACTTCCTTCAAGCGCTGTTTTG
GGATGGAACATGTCATCCAGTCAGTCACATTTCCTTGCTCCAATGCCAAGTATGGATGCAGAGAGGGTCACGAATACTAT
CAGAAAGAAGGACATGAGCAGGTATGCCCGTATGCCCCATGCTTCTGCCCAGCGTCCGACTGCAGCTTCACTGGGCTGAC
ACACGAGCTCCTGGACCATCTCACCATCTATCACATGT------------------------------------------
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>chr3B_30
ATTGA----------------------------ATTTTTTTTT--TGTATATACTTCTAATTTAATACAACTACCATC-T
TTTTT----TTCTGTTCCGTTGCAACGTGCTAACATTACATATGTATAAAAGAAAAGTTGGATTCATCAAAGT-CACTCA
AATACCGGGCCCATATCAAGCCCAGCCCAGCCCATTATTCAGCGCCGAGCTTGACCACTGGTGAAACAGCCTCCTTCCT-
--------------CCCAAACCCTCGCTTCTCAGAGAAAGAGGGGGAAAAGAAAA-------------------------
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-------------------------CCTTGCCGCCGTCGCCGGCGCTCTCGCTCCCTCCTCCGCTCCGTTTCTCCCGCTC
CCACCGGCCGGCATCGGATCGACGAGCGAACTGTCTCATCCGAGAGCTCAGCGGCAAGGGAGCAGCGACCTCGTCGTCGA
CGGCG-------------------ACCTCG--------------------------------------------------
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--------------------------AGGCCGGCCACGGCGTCTAGGTCTTGCAGCGGATAGACCCCGAGGGCACCAGTT
ACTAGTTCAGGTACGGCCGCACTGCATCCCTCCCG---ATTCGGAACTTTCCTCCGTCGCAGGAGTCGCATTGCTAATGC
C-AATGCCCAATTTCGAGCCGGAATAAAGACCTTCTTTTTACTGCTCCTCTGTCAGACTACTCTCATACGCATCCTTAGT
TCATCAATGCTCTTATTATTATCCCACTAATCTGGCAAATCAGCTCACTATTTACTGTCCCGAAACAAGAGATGTCCGGA
A-------------------ACAACTCGATTAATTAGCCTGTAGTGTGTAA-----TTTGTGCTTGTGCTGTTGCTTTTC
CT-TTGCTAT--CTTGGCCCCAAACAATTACAGTTTCCTTTCTAGCTTATTATGCCTAC-------CACACCAGTGTCAC
TTCCAAATCCATGACCTTTGTCAGTATGTCTTGTGGTCTTGTGGAACAGGCCGGAGAAAGTAGCGGTGG-----------
-----------------T-------------CTTGGTTTCTGCCTGTAGT----GCCAG---------------------
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---------------------------------------------------CAGCAAACAGCAAGCAATTTTAGTTCTGG
TACCCTT-GAGTTTTGTTGGCGATGGACGGCAGCAACTCCAACAACAGAAGTGGCGAAGCTCCGAGAGAGGGAGACCGCT
GGATGGATGTCAGAATATTGAAGGAGACCCTTGACTGCACAGTCTGCTTTGAGCACTTTAGCACTGAGATTTATCAGGTA
AATGCACTATGTATATGTACATATTGACATGT-TTTGAACA-TAAGCTTTTTTTTTCATTTCT------TATAAAGATCA
AGATAAGAGAAGAGCTTTGACGAATTATCATTGTACGTA------------------------------------ACATT
ATAGTTATGATAGTTGAAATGATGGAATGTGTAGCACTAACCTGTTTTCTTGTCGTGTAGTATATTCTGTTTCCCCCTTC
TTAT---TTATGTTAGAACTTATTCTCATGGGGACCCAATTAATCATTTCGTTTCCACAGTGTTCTGTTGGGCATTTCAT
ATGCTCATCTTGCCGCGACAAGATACTGGACAAGAAGTGCCCCACATGCTCTATCAAAACTTCCTTCAACCGCTGCTTTG
GGATGGAACATGTTGTCCAGTCAGTCGCATTTCCTTGCTCCAATGCTAAGTATGGATGCAGAGAGGGTCACGCATACTAT
CAGAAAGAAAGGCATGAGCAGGTATGCACGTATGCCCCATGCTTCTGCCCAGCGTCCGACTGCAGCTTCACTGGGCAGAC
ACCCGAGCTCCTGGACCATCTCACCATCTATCACATGTCTCCATGTACAGACCTCCCATATCATGGGACGGTGTCTCTCC
GCTTAGAACCGGGCATACATGTTCTGGCACCCCGCAACAAGAGCAACAACCATTTTTTCATGCTCAACATGGAGCCAGAG
CGTCTTGGATATGCTATCTCAGTCGTCTGCGTCCAACCTAAAGCTACGGAACCCAAGTTCGCATGTAGTATGAGTTATGA
CTGCTCTGGGACAGGTTATTGTGGAAGTGCAAGTTGCCAAATAAAAAGCTCTACACTCTCTGATGGGCTACCGACGGACT
ACGACTTAATTCCACCCAAGAGAAAGATTTCTGGTGATCGGAAATTTATCATGCTGAGAATCACCATTCATCAAGCTTCA
AGTGTCAGTAAATCCCGTGTTAAAGGAAAGGGCCTGACTTCCACTCCATTGACCCTGTTTGCCCGTTGTTCTGATGATGA
TGGCGATATAGTCTGCAGATCCTGTATTGAAGGAAAGGGGCCGACTTCCTCTCAAAAGCTACTGTTTCCTGATTATTCTT
CTGATGACGATGAGGATGTGCCCTCAAGATTCGAGCGTGCACTCCAACGGGTGTCCCTGCTTGATTAATGGGCCGATTGA
TGATGTACCTTCAAGGTCCGATCGTGCTCGTGTATGCTAGAGGTTTAGCGTTGGTGTGTGGACACCGTTA---ATATGCC
TGGGTGGGTTTCACCATTCTGGTTCCAGGATATATGTATGTCGGGAACCTGTATGACCCAAGTATCGGAGCTGTTTTGAC
CTTCCTTATGTGTTTTGTTGTGCGGAACACGTGTCGTGGCATGTGAGGCTGTAATTGATGTACTAGAAAAATATTATGCT
ATGTCAGTACATTTGTATCGATGAACCACTAACTTGCAGTTATCCTGTTTTATAATCTTGCGCTATAACAGGGATGCCCT
CTCTTTCAGTTTCTTTGTGCATTCATGAGTTCCCAATG---------TTGCATATATCGGCAGTACTGAAGAAATGAATT
GTCTAACTGAATCATAAGAATATTTTTATTTACTTGTGTGCACAAAGACCAAGCTAGACATAGTGGTAATACTGCCTGCT
ACTCCCTCTGTTCCCAAATATAAGTCTTTTTAGAGATTTCAACAAGGGACTACATACGAAGCAAAACGAGTGAATCTACA
CTCTAAAATATGTCTATATATGTCCGTATGTTGTAGTCCATTTGAAACCTCTAAAAAGACTTATATTTAGGAACGGAGGA
GTACTATATGATGGCAAAATTGCAACAGGTTACCATGTCTGCACTTTTAAGAAGTTGGTCATTACATATGTTACGGTTTG
AAGTTTGAAACAACTGAAACATGTCCACATAATCCTATAGGGACAGCTAGGCATAGATTAAATTTACTGTATTTCCAAAT
GTTGTTTATTATTGGATGCCATGCCATACTTTTCGTTGGTGTTTTAGGATTAAGATCTTAAATTTTTTTAACCCGTTTAA
ATAAGTTTAT---AGAGGATAGTAATCAGATTGTGAGGTTCTGCTGAAAGTCACAAGCGTTTCAAGTTTGTATGCTGTGG
CAATGCTGAAATTTAAAAAGCTCAAATACAGCCTGATTGGGAATTTTGAAACTAATTGTGTTCGCTGAAATTGCAAAAAA
GAG-----ATGTGAAATTACGCAATTGTTTTT------------------------------------------------
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--------------------
>chr3A_406
ACATAATAGCTATGGTAGCTGAAGTATTGGAATGTGTAGCAGTAACCTATCTTCTTGTTGTGTAGTAGTACTATTTTCCT
TTTGTATTTATGTTAAATGGTATTCTCACGGGGACCCAACTAATTGTTTGGTTTCTGCAGTGTTCTGAGGGGCACATCCT
ATCCAGGTCCTGCCATAACAAGATACTTGACAAGAAGTGCCACGAATGTTGTATTGAAACTTCCTTCAAGCGCTGCGCTA
TAATGGAACATGTCGTCCAGTCAGTCGCAGTTCCTTGCTGCAATGCCAAGTATGGATGCAGAGAGGGTCTTGCCTACTAT
CAGAAAGAAAGACATGAGCAAGTATGCCCGACTGCCCCATGCTTCTGCCCAATTCCCGGCTGCAGCTATGTTGTGCTGAT
ACCCCTGCTCCTGGACCATCTCACCTTCAAGCACAGCTGTCCATCAACAGTCCTCCAAGATTTTGACACGTTGTCTCTCC
GCTTCAAACCAGGCTTACATGTTCTGCAACGCCGCAGTAGGAGGACCAACTATATTTTCCTGCTCAACATGGACTCAGAG
CCTTTTGGATATGCTATCTCAGTCGTCTGCGTCCAACCGAAAGTTACGCAACCCAAGTTCACATGTAGTTTGAATTATGA
CTACTCTATGACAGGTTATTGTGAAAGTTCAAGTTTCCAAGTAAGAAGTTCTTCACTCTCTGATGGGCTACTGACGGGCC
CTGACTTAATTCTGCTCATGGAAAAGATTTCCGATGATCGAAATGGTATCATGCTCAAAACCACCATTCAACGGGAAGCT
TGTTCTGGTGATTCTTACTATTCCAACGACGACGATTATGATGATGATGATGATGATGATGATGATGAACATGATGTTGA
CCATGATCACGCAAGGCTTCTGATGATACGTCATGCTCTTGAAGCACAGAAGTAAGAAGTCCCTATGTCCTTATGGTTCT
GACAATGATGATGATATCCCTTTAAGATTTGACCGGGCTCTTCAACTGAAGTCCCTGTTTGACTGATGGGCCGATTGATC
ATCTTTAAGATTTGATCATGCTTGTGTATTCTGGAGGTTTGGGGTGCTGCATGGACTTGTTGTTATTATGCCTGTTTTTC
ACCGTTCTTGTTCCCAGGATATATGTATGTCGAGACTCTGTATGATCTTAAGTATTGATTCGGTTATTCAACAATGCGGC
TCCTTTGTATGTATTTTTTTGTCCCAAACACATGGTGCAATGTGGGAAGCCGTTCGTGTTCTACTGAAAAACAAAGCAGT
GTGTTATGTTTACATATCTCTGCATTATGTGGCTAGAGTATGAACCACTAACTTGCACTTATCCCGTTTCAGACTCTTGC
ACAAAGAACATGAATTCATCCTCTTGCAGTTCTGTGTGCACATGGTTGCAGATATCGGCTATATTGGACGATGGTAAGAT
GAAATGTTTTCGTGAATCATAAGAATATTTTTATGTAACTTTGCACGCAATGACGCAAAGACCAATTTGACTGTATGCAA
GATTTTTTGTTTGTTTAAGAAAAGTGTATGCAAGAATGTGAAAGCGGTCAAAAAGTAATCAAAATTCCCCCGCAAAAAAA
GTAATCAAAATTTTCAATTAGGGCAAAGTCCACACGGCCAGCTCATATCCAGCCCACTCTCTCTTCCACTCATACCCCAA
GCTTGGCTGTGGGCTGGTCAGTCCCCTCACACTCTCACTCTCCCCCTCTCGGCCGGCGCTGCCTCGGTGGCTCCTGCGAA
GCCCCGCCTGCCGCCTCCGTCGCGCTCGCCTCCTCTCCCCGCTCCCGTGCTACGGCGCGCGCATTCCGTTGGCGATTTTG
CTGGCAAGGGAGAGCAGTCTTCTCCCCTCTCTCCCTGGTAGGCGAGGGTTGGAGGAGGCAGCTAACAAATCTCCGACCGC
GCCGCCAGCCGGAATGGCAAACCTCGAGGCCGGCCATGGCGACTAGGTCCTGCAGTTGACAG-----------ACCAGGT
GCTAGTTCATGTACGGCTGCATTCCTCTCGATCCGGGGCCACACTGCTTC----------------------------GC
C-ATTGCTCATCTTTGAATTAGAATAAATTTCTTGTTTTTCAGTCGCATATGGATCGCTGCTACTCTTGTTACAGATGTG
------------------------------------AAAGCGGTTCAATATTTTGTTTCACGAAACAAGAAATATAACAG
ATGTGAAATAGCAGTGAACAAGA--------------------------AA-----TGTTTGCTTGTTTGGTTGCTTTTC
CTCTTGCTGT--TTTGCCCCAAAACAATTGTT------TTTCTAGCTTATTATGCTTATTAGTGTAA-----------GC
TTGCATTTCCATGACTTTTATCTTGTGGAA--------------------CAGGAGAACGGAGCGGTGAGATTTTGCTGA
TTAATAGTAGTTTTGGAT-------------CTCGGTTCCTGTCTGAAAG----ACCAG---------------------
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---------------------------------------------------CAGCACACAACAAGCAA-GTTTGTGCTGG
TACACTTTGAGTTTTGTTGGTCATGGACGCTAGTGAATCCGACAAGAGAGATTGGCTAGAGAA---------AGAACCTT
GGATGAATGTCAGAATATTGAAGGACACCCTCAAGTGCCCTGTCTGCTTTGAGCCCCTCAACAATGCGATATATCAGGTA
AATGTGCCAAGTGTATGTACATATTGACTTGT-CTTTAACCTCAAGCTTTCA-TTTCATTTATTTATTATATAAAGCTCA
AGACAAAAGAAGAGCTCCGATGAATCTACCGTTGGATGTATTTCTACTTGGAACGAAACTGTTTCTTCTGCAACGACATA
ATAGCTATGGTAGCTGAAGTATTGGAATGTGTAGCAGTAACCTATCTTCTTGTTGTGTAGTAGTACTATTTTCCTTTTG-
-TAT---TTATGTTAAATGGTATTCTCACGGAGACCCAATTAATTGTTTGGTTTCTGCAGTGTTCTGAGGGGCACATCCT
ATCCAGGTCCTGCCATAACAAGATACTTGACAAGAAGTGCCACGAATGTTGCATTGAAACTTCCTTCAAGCGCTGCGCTA
TAATGGAACATGTCATCCAGTCAGTCGCAGTTCCTTGCTGCAATGCCAAGTATGGATGCAGAGAGGGTCTTGCCTACTAT
CAGAAAGAAAGACACGAGCAAGTATGCCCGACTGCCCCATGCTTCTGCCCAATTCCCGGCTGCAGCTATGTTGTGCTGAT
ACCCCTGCTCCTGGACCATCTCACCTTCAAGCATAGCTGTCCATCAACAGTCCTCTAAGATTTTGACTCGTTGTCTCTCC
GCTTCAAACAAGGCTTACATGTTCTGCGATGCCGCAGTAGGAGGACCAACTATATTTTCCTGCTCAACATGGACTCAGAG
CCTTTTGGATATGCTATCTCAGTTGTCTGCGTCCAACCGAAAGTTACGCAACCCAAGTTCACATGTAGTTTGAATTATGA
CTACTCTATGACAGGTTATTATGAAAGTTCAAGTTTCCAAGTAAGAAGCTCTTCACTCTCTGATGGGCTACTGACGGGCC
CTGACTTAATTCTATCCAAGGAAAAGATTTCTGATGATCGAAATGGTATCATGGTCAAAACCACCATTCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chr3D_636
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TTATTATCCCAGTAATGAGGCAAATCAGCTCAATGTTTACTGCCCCAAAACAAGAGAAATTACAG
ATGTGAGATTGTAGTACTCCACCACTCGATTAATTAGCCTGT---GTCTAA-----ATTGCGCTTGT-CTGTTGCTTTTC
CT-TTACTAT--CTTGGCCCCAAACAATTACTCCCTTCGTTCCAAAATAGATGACTCAACTTTGTACATACCAGCGTCAC
TTCCAAATCCCTGAATTTTATCAGTATATCTTGTGGTCTTGTGCAACAGGCCGGAGAAAGGAGCGGTGG-----------
-----------TTTGGAT-------------CTTGGTTTCGGTCTGCAGT----ACCAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAGCAAACAGCAAGCAA-TTTAGTTCTGG
TACACTT-GAGTTTTGTTGGCGATGGACAGCAGCAACTCCAACAAGAGGAGAGGCGAAGCTCCGAGAGAGGGAGACCGCT
GGATGGATGTCAGAATATTGAAGGAGACCCTTGACTGCACAGTCTGCTTTGAGCACTTCAGCACTGAGATTTATCAGGTA
AATGCACTATGTATATGTACATATTGACCTGT-TTTGAACA-CAAGCTTTTTTTC-CATTTCT------TATAAAGATCA
AGATAAGAGAAGAGCTTTGACGAATTATCATTGTACGTA------------------------------------ACATA
ATAGTTATGGTAGCTGAAATGATGAAACGTGTGGCACTAACCTGTCTTCTTGTTGTGTAGTATATTCTGTTTTCCCCTTC
TTATTTATGTTATTAAAACTTATTCTCATGGGGACCCAATTAATCATTTTGTTTCCACAGTGTTCTGTGGGGCATTTCAT
ATGCTCGTCTTGCCGCGACAAGATACTGGACAAGAAGTGCCCCACGTGCTCTATCAAAACTTCCTTCAACCGCTGCTTTG
GGATGGAACATGTTGTCCGGTCAGTTGCATTTCCTTGCTCCAATGCCAAGTATGGATGCAGAGAGGGTCACGCATACTAT
CAGAAAGAAAGACACGAGCAGGTATGCCCGTATGGCCCATGCTTCTGCCCAGCGTCCGACTGCGGCTTTGGTGGGCTGAC
ACCCGAGCTCCTGGACCATCTCACCATCTATCACATGTCTCCATGTACCGACCTCCCATATCATGGGACGGTGGCTCTCC
GCTTAGAACCGGGCATACATGTTCTGGCACCCCGCAACAAGAGCAACAACCATTTTTTCATGATCAACATGGAGCCAGAG
CGGCTTGGATATGCTATCTCAGTCGTCTGCGTCCAACCTAAAGCTACGGAGCCCAAGTTCGCATGTAGTATGAGTTATGA
CTGCTCTGGGACAGGTTATTGTGGAAGTGCAAGTTGCCAAATAAAAAGCTCTACACTCTCTGATGGGCTACCGACGGACT
ACGACTTAATTCCACCCAAGAGAAAAATTTCTGGTGATCGAAAATTTATCATGCTGAGAATCACCATTCATCAAGCTTCA
AGTGTCAGCAAATCCCGTGTTAAAGGAAAGGGCCTGACTTCTGCTCCATTGACCCTGTTTCCTCGTTGTTCTGATGAAGA
TGCTGATATAGTCTGCAGATCCTGTATTGAAGGAAAGGGCCCGACTTCCTCTCAAAAGCTACTGTTTCCTGATTGTTCTT
CTGATGACGATGATGATGTGCCCTCAAGATTCGAGCGTGCTCTCCAACGGGTGTCCCTGCTTGATTAATGGGCCGATTGA
TGATGTACCTTCAAGGTCCGATCGTGCTCATGTATGCTAGAGATTTAGCGTTGGTGTGTGGACGCCGTTA---ATATGCC
TGGGTGGGTTTCACCATTCTGGTTCCAGGATATATGTATGACGAGAACCTGTATGATCTAAGTATCGGAGCTGTTTTGAC
CTTCTTTATGTGTTATGTTGTACGGAACTCCTGCCCCAACATGTTATGCTGTCCATGATGTACTAGAAAA-TATTGTGCT
ATGTCAGTAAATTTGTATGGATGAACCACTAACATGCAGTTATCCTGTTTTATAATCTTGCACAATAACAGGGGTGCCTT
CTCTTTCAGTTTCTTTGTGCATTCATGAGTTCCCAATG---------TTGCATATATCAGCAATATCGACGAAATGAATT
GTCTTCCTGAATCATAAGAATATTTTTATTTACTTGTGTGCACAAAGACCAAGCTAGACATATTGGTAATACTGCCAGGC
ACAATACTGTCTGC------------------------------------------------------------------
--------------------------------------------------------------------------------
-TACTATATGATAGCAAAATTGCAACTGGTTACTATGTC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chrUn_1249
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACATA
ATAGCTATGGTAGCTGAAGTATTGGAATGTGTAGCAGTAACCTATCTTCTTGTTGTGTAGTAGTACTATTTTCCTTTTG-
-TAT---TTATGTTAAATGGTATTCTCACGGGGACCCAACTAATTGTTTGGTTTCTGCAGTGTTCTGAGGGGCACATCCT
ATCCAGGTCCTGCCATAACAAGATACTTGACAAGAAGTGCCACGAATGTTGTATTGAAACTTCCTTCAAGCGCTGCGCTA
TAATGGAACATGTCGTCCAGTCAGTCGCAGTTCCTTGCTGCAATGCCAAGTATGGATGCAGAGAGGGTCTTGCCTACTAT
CAGAAAGAAAGACATGAGCAAGTATGCCCGACTGCCCCATGCTTCTGCCCAATTCCCGGCTGCAGCTATGTTGTGCTGAT
ACCCCTGCTCCTGGACCATCTCACCTTCAAGCACAGCTGTCCATCAACAGTCCTCCAAGATTTTGACACGTTGTCTCTCC
GCTTCAAACCAGGCTTACATGTTCTGCAACGCCGCAGTAGGAGGACCAACTATATTTTCCTGCTCAACATGGACTCAGAG
CCTTTTGGATATGCTATCTCAGTCGTCTGCGTCCAACCGAAAGTTACGCAACCCAAGTTCACATGTAGTTTGAATTATGA
CTACTCTATGACAGGTTATTGTGAAAGTTCAAGTTTCCAAGTAAGAAGTTCTTCACTCTCTGATGGGCTACTGACGGGCC
CTGACTTAATTCTGCTCATGGAAAAGATTTCCGATGATCGAAATGGTATCATGCTCAAAACCACCATTCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chrUn_1249
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------ACATA
ATAGCTATGGTAGCTGAAGTATTGGAATGTGTAGCAGTAACCTATCTTCTTGTTGTGTAGTAGTACTATTTTCCTTTTG-
-TAT---TTATGTTAAATGGTATTCTCACGGAGACCCAATTAATTGTTTGGTTTCTGCAGTGTTCTGAGGGGCACATCCT
ATCCAGGTCCTGCCATAACAAGATACTTGACAAGAAGTGCCACGAATGTTGCATTGAAACTTCCTTCAAGCGCTGCGCTA
TAATGGAACATGTCATCCAGTCAGTCGCAGTTCCTTGCTGCAATGCCAAGTATGGATGCAGAGAGGGTCTTGCCTACTAT
CAGAAAGAAAGACACGAGCAAGTATGCCCGACTGCCCCATGCTTCTGCCCAATTCCCGGCTGCAGCTATGTTGTGCTGAT
ACCCCTGCTCCTGGACCATCTCACCTTCAAGCATAGCTGTCCATCAACAGTCCTCTAAGATTTTGACTCGTTGTCTCTCC
GCTTCAAACAAGGCTTACATGTTCTGCGATGCCGCAGTAGGAGGACCAACTATATTTTCCTGCTCAACATGGACTCAGAG
CCTTTTGGATATGCTATCTCAGTTGTCTGCGTCCAACCGAAAGTTACGCAACCCAAGTTCACATGTAGTTTGAATTATGA
CTACTCTATGACAGGTTATTATGAAAGTTCAAGTTTCCAAGTAAGAAGCTCTTCACTCTCTGATGGGCTACTGACGGGCC
CTGACTTAATTCTATCCAAGGAAAAGATTTCTGATGATCGAAATGGTATCATGGTCAAAACCACCATTCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chrUn_1249
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACATA
ATAGCTATGGTAGCTGAAGTATTGGAATGTGTAGCAGTAACCTATCTTCTTGTTGTGTAGTAGTACTATTTTCCTTTTG-
-TAT---TTATGTTAAATGGTATTCTCACGGAGACCCAATTAATTGTTTGGTTTCTGCAGTGTTCTGAGGGGCACATCCT
ATCCAGGTCCTGCCATAACAAGATACTTGACAAGAAGTGCCACGAATGTTGCATTGAAACTTCCTTCAAGCGCTGCGCTA
TAATGGAACATGTCATCCAGTCAGTCGCAGTTCCTTGCTGCAATGCCAAGTATGGATGCAGAGAGGGTCTTGCCTACTAT
CAGAAAGAAAGACACGAGCAAGTATGCCCGACTGCCCCATGCTTCTGCCCAATTCCCGGCTGCAGCTATGTTGTGCTGAT
ACCCCTGCTCCTGGACCATCTCACCTTCAAGCATAGCTGTCCATCAACAGTCCTCTAAGATTTTGACTCGTTGTCTCTCC
GCTTCAAACAAGGCTTACATGTTCTGCGATGCCGCAGTAGGAGGACCAACTATATTTTCCTGCTCAACATGGACTCAGAG
CCTTTTGGATATGCTATCTCAGTTGTCTGCGTCCAACCGAAAGTTACGCAACCCAAGTTCACATGTAGTTTGAATTATGA
CTACTCTATGACAGGTTATTATGAAAGTTCAAGTTTCCAAGTAAGAAGCTCTTCACTCTCTGATGGGCTACTGACGGGCC
CTGACTTAATTCTATCCAAGGAAAAGATTTCTGATGATCGAAATGGTATCATGGTCAAAACCACCATTCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>chrUn_1249
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------ACATA
ATAGCTATGGTAGCTGAAGTATTGGAATGTGTAGCAGTAACCTATCTTCTTGTTGTGTAGTAGTACTATTTTCCTTTTG-
-TAT---TTATGTTAAATGGTATTCTCACGGAGACCCAATTAATTGTTTGGTTTCTGCAGTGTTCTGAGGGGCACATCCT
ATCCAGGTCCTGCCATAACAAGATACTTGACAAGAAGTGCCACGAATGTTGCATTGAAACTTCCTTCAAGCGCTGCGCTA
TAATGGAACATGTCATCCAGTCAGTCGCAGTTCCTTGCTGCAATGCCAAGTATGGATGCAGAGAGGGTCTTGCCTACTAT
CAGAAAGAAAGACACGAGCAAGTATGCCCGACTGCCCCATGCTTCTGCCCAATTCCCGGCTGCAGCTATGTTGTGCTGAT
ACCCCTGCTCCTGGACCATCTCACCTTCAAGCATAGCTGTCCATCAACAGTCCTCTAAGATTTTGACTCGTTGTCTCTCC
GCTTCAAACAAGGCTTACATGTTCTGCGATGCCGCAGTAGGAGGACCAACTATATTTTCCTGCTCAACATGGACTCAGAG
CCTTTTGGATATGCTATCTCAGTTGTCTGCGTCCAACCGAAAGTTACGCAACCCAAGTTCACATGTAGTTTGAATTATGA
CTACTCTATGACAGGTTATTATGAAAGTTCAAGTTTCCAAGTAAGAAGCTCTTCACTCTCTGATGGGCTACTGACGGGCC
CTGACTTAATTCTATCCAAGGAAAAGATTTCTGATGATCGAAATGGTATCATGGTCAAAACCACCATTCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>SNPs
-----SS--------S------------S--------------SS----------------------S------------
-----S-SS--------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S----------------------------------------S-S-----S----------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------SSSSSSS------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--S------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-------------------------------------------------S-------------
-------------------------------------S------------------------------------------
----------------------S---------------------S------------------------S----------
----------------------------------------------------------------------SSS-------
-----------------------------------------------------------S--------------------
---------------------S-----------------------------S----------------------------
-----S------------------------------S--------------------------S-------S--------
--------------------------------------SSSSSSSSS--------------------S-S----------
-----S----------S-----------------------------S----------S-------S--------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S------S----S---S-S--SS-S-----
-SS-SS--SSSSS-------------------------------------------S--S--------------S-----
-----S-----S-----------------SS-------S---S---------------SS---S---------------S
S-SSSSSS---------S-S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS
>forward_2500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GGAGAAAGGAGCGGTGGTTT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_4278
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TGCCCGACTTCCTCTCAAAA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>forward_3623
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TGGAACATGTCGTCCAGTCG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
>reverse_5578
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TCTAACAAACGGGTCCTGCC---
--------------------------------------------------------------------------------
--------------------
