>input_sequence_55974
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---------ATGGGTACTGCCAGCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCAAGCGTCGCCAGCTCCAGTGG
GCAGCTGCAGGTGGGGTTCTACTCCAAGTCGTGCCCCAGCGCCGAGTCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCG
CCGCCGACTCCACCATCCTCCCCGCCCTCCTCCGCCTCCAGTTCCACGACTGCTTCGTCAGGGTACGTACGCGCGCTCTC
CCTCGGCAATTCGCCAGGGTAAAGGAAGTAATTCGTAGTGTGTT---TGACGTGGGAATTCGCCTGGTTCTGCGCCTCTC
GATCTCAGGGGTGCGACGCGTCGGTGCTGATCAAGGGCGGGAGCAACAACGCGGAGGTGGACAACAACAAGCACCAGGGG
CTCCGCGGGATGGACGTGATCGAGAACGCCAAGGCGCAGCTCGAGTCCGAGTGCCCCGGCGTCGTCTCGTGCGCCGACAT
CGTCGTCCTCGCCGCGCGCGACGCCGTCGCATTCGTAAGTA--GTAACATCCTCATGCACGCTGCACATATGCCTGCATG
GATGG-----------AAGTGGGAATTGATCGGTTTCTTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACAGGG
CGCCGCGACGGGAAGGTGTCCAACGTGCGGGACGGTGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTC
CAAGTTCCGCGCCAGCGGCCTCGACGACAAGGACCTCGTCCTCCTCAGCTGTAACCAAGCAAACCAACCCATCTGTTTCC
TTGCGTTCCCTCGATCGACCACGGACTCATGTC-------CCTAACCCATCGATGGCGGCATGCATGCAGCGGCGCACAC
GGTGGGCACCACGGCATGCTTCTTCATCCAGGACCGGCTCTACAAATTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGACC
CGTCGATCCCAGACGGCTTCCTGTCGGAGCTCAAGTCCCGGTGCGCGCCGGGAGACTCCAACTCGCGCGTCTCCCTGGAC
CGCGGCAGCGAGCGCGTCTTCGACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCCGTGATCGCCTCCGACGCCGC
GCTCTACAACGACACCAGCACCGTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCC
GCCAGGACTTCGCGGACTCCATGGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTC
TGCTCCAAGTTCAACTGA--------------------------------------------------------------
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>chr4D_1_TraesCS4D01G102600
ATTATGTTAGTACTTTATTTATCTCTCTCCTTTTTAATTACATGACACATTATTTTTTTTCTTATGTGGCATCTATGTTA
CTCCTACTATGACTAGCATGATGCAAAGCGTCTCCCTGCACGGAATTGCTCTGTCATAAAGCCCAGAAACCCCAAAATCA
GGGGAGAACTCGCACACTTTCGTAGTTGAGC-----------CAATCCGGCTGCGGCCATCTCATGGCATGCATGCA---
--A-GCTGCCATGCCGCGGCAGCAAATCTTTACTCACTCGCCGGCAACTTGCCGCATGCCCTTTTGCCGTGACAACTGGG
CCATAAATCGTGGCACGCTGGAGCCGCGCGCATCAACACCGACCGGTGGCCCGCGCACATGGACGCATGGCCGGCCAGGC
TCACCATGGTCCAGGAGAAACTTCTCTCCCCGGCTATTCCCGGAACCGTGTATGGCATTCATGGCCGTGTCCCCGCAAAG
ATTGAATTGGGAGATCAACTTCTGGGACTAGGTGGTAGATTCATCAGCTTCGCCGTACTCGACATTTTCTTTCACGTTAT
AAATCCGAAAGGACGCATGAAGAATCTA-CTATGCGACGCATTTGGATCCGATCTCCCACCAGAATCCTCCTCGTAAAAT
CCTCACTTGGGCTTTCATGCATGTCTTCAGTACTACA---GTAAATACTGGTCCAGATTGTTGTTTGTGAAATTACGTAT
TG----CTGA--------CACCTGTACTCCAAATATGACAAACTT-CACCTCGGCAAGACCCTCCTACAGCGAAGAGTTC
ATGCTGCTGC-------------TGCTGCAGTATGCAGTTTTGTACCACTAAATGCTTGACACCTACTCTTTGCGGTGAG
GTCAAATCATCCATGTGTTGGCTGGCCTACGGCTCTACTTCTCCACCGGACGAGAGCTTATAAAACCCCATTAACGCCAC
CCAGAGGACCTTGATCCTAG--CTCTCCTCGGGCCTTTTCTTTCTCTCTTTCTCTCGCAAGCTCCTCGCTCTCTAGATTC
TTTTCTAGGATGGGTACTGCCAGCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCAAGCGTCGCCAGCTCCAGTGG
GCAGCTGCAGGTGGGGTTCTACTCCAAGTCGTGCCCCAGCGCCGAGTCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCG
CCGCCGACTCCACCATCCTCCCCGCCCTCCTCCGCCTCCAGTTCCACGACTGCTTCGTCAGGGTACGTACGCGCGCTCTC
CCTCGGCAATTCGCCAGGGTAAAGGAAGTAATTCGTAGTGTGTT---TGACGTGGGAATTCGCCTGGTTCTGCGCCTCTC
GATCTCAGGGGTGCGACGCGTCGGTGCTGATCAAGGGCGGGAGCAACAACGCGGAGGTGGACAACAACAAGCACCAGGGG
CTCCGCGGGATGGACGTGATCGAGAACGCCAAGGCGCAGCTCGAGTCCGAGTGCCCCGGCGTCGTCTCGTGCGCCGACAT
CGTCGTCCTCGCCGCGCGCGACGCCGTCGCATTCGTAAGTA--GTAACATCCTCATGCACGCTGCACATATGCCTGCATG
GATGG-----------AAGTGGGAATTGATCGGTTTCTTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACAGGG
CGCCGCGACGGGAAGGTGTCCAACGTGCGGGACGGTGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTC
CAAGTTCCGCGCCAGCGGCCTCGACGACAAGGACCTCGTCCTCCTCAGCTGTAACCAAGCAAACCAACCCATCTGTTTCC
TTGCGTTCCCTCGATCGACCACGGACTCATGTC-------CCTAACCCATCGATGGCGGCATGCATGCAGCGGCGCACAC
GGTGGGCACCACGGCATGCTTCTTCATCCAGGACCGGCTCTACAAATTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGACC
CGTCGATCCCAGACGGCTTCCTGTCGGAGCTCAAGTCCCGGTGCGCGCCGGGAGACTCCAACTCGCGCGTCTCCCTGGAC
CGCGGCAGCGAGCGCGTCTTCGACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCCGTGATCGCCTCCGACGCCGC
GCTCTACAACGACACCAGCACCGTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCC
GCCAGGACTTCGCGGACTCCATGGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTC
TGCTCCAAGTTCAACTGAGAGAGACACATCCGTGGATCCAGATTCCATTCATTGCGCTGCCGGCCGGAGTACTGGT----
-TTGGCTAGCTGGAGATGAAAATCACTAGCTAGCCCATGCGGACATGCATCTCGTGGGTGCATGGCCCGGTCTCGTGGCG
CTTTCATGGCTTTTTCTTCTTCTTCAATTTATTGTGTACATGTTATTGAAAAGAGAGAGGGGAAATTTAGTGGATTCATG
TGATTCTGGCGCCAAGGTCTAGTACGTACGGCCAAGGATCTGTGCAGTTTTCTCTTTTGCAGCGGCTGGAAGCGAGATTA
AATTCATA--GC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------TAGGGTATAAGATGTGCTTCTGTATGCTTGTATGTACACTACACACACCATATGTGCAA
TTAAGTGGAGGTGTAATTTATGGTCTTGTCTTGGATTTTTGGGGTATTTATCTGTGCCAACTGCAATTGGAAAGAAGTGT
CAAATGTTGC-AAAACAAAATCTTCTTCTGGTATATAGGAGTACTATGTACAATCTTTGTACCACAATCAAGTGTCGAGG
CCGTAGCAGAGCTCGTCGTCGTTGCACCATGATAT--TGATAGGTCTAGACAACGCACAAGATCAAAAAAAT----TCAG
CCACTCAGGGACCT--GGATTGTCGAGGACCAAATCTCGTTGAAAGAGCTCCCAAGGAAATCTTTACTTTTCACGAGGTG
CATGGAACTGTAAGGAAGACCTCAGTTAATGCGTTTCTCCTGGGTTTACCAAATTGGCCTAGCTCCTGCTAAGTCACCGC
GGTGAAAGAAAACTCCTGTGCATATTCATGTGGTAGAATCCAAGCTGCAGAGCGCTGAATGTGTCAGCTGGAGGATGCAA
TTGGGTAGCTGAGACACATCATTGAGTAAAAGTGTACTGCCCTGTTGA-------TGCAATGGCCTTTGCTTCCATGCTT
TGTTTTGGTAGTTGGGAGAGCAGGAAGTTGGCAGCGTTAGCTGGGTTTGTCTTTATTGGGGACGAGAAC-TTTTTTTCGC
ATTGAGTAGCT
>chr4A_97
--------------------------------------------------------------------------------
----------------CATGATGCAAAGCGTCTCCCTGCACGTAATTGCTCTGTCATAAAGTCCAGAAACCCCAAAACCA
GGTGAGAACTCGCACACTTTCGTAGTTGAGGGCTTGAGGCGGCAATCCGGCTGCGACCATCTCATGGCATGCATGCA---
--AAGCTGCCATGCCGCAGCAGCAAATCTCTACTCGCTCGCTGGCAACTTGCCGCATGCCCTTTTGCCGTGACAACTGGG
CCATAAATCGTGGCACGCTGGAGCCGCGCGCATCAATACCGGCCGGTGGCCCGCGCACATGGACGCATGGCCGGCCAGGC
TCACCATGGTCCAGGAGAAACTTCTCTCCCCGGCTATTCCCGGAACCGTGCATGGCATTCATGGCCGTGTCCCCGCAAAG
ATTGAATTGGGAGATCAACTTCTGGGGCTAGGTGGTAGATTCATCAGCTTCGCCGTACTCGACATTTTCTTTCACGTTAT
AAATCCGAAAGGACGCATGAAGAATCTATCTATGCGACGCATTTCGATCCGATCTCCCACCAGAATCCTCCTCGTAAAAT
CCTCACTTGGGCTTTCGTGCATGTCTTCAGTAGTACTGCGGTAAATACTGGTCTACGTTGTTGTTCGTGAAATTACGTAT
TGCTACCTGA--------CACCTGTACTCCAAATATGACAAACTTTCACCTCGGCAAGACCCTCCTACAGCCAAGAGTTC
ATGCTGCTGC-------------TGCTTCAGTATGCGGTTTTGTACCACTAAATGCTTGGCACCTACTCTTTGCGGTGAG
GTCAAATCATCCATGTGTTGGCTGGCCTACGGTTCTACTTCTCCACCGGACGAGAGCTTATAAAACCCCATTAACGCAGC
GCAGAGGACCTTGATCCTAGCTCTCTCCTCAGGCCTTTTCTTTCTCTCTCTCTCTCGCGAGCTCCTCGCTCTCTAGATTC
TTTTCTAGGATGGGTACTGCCAGCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCCAGCGTCTCCAGCTCCAGTGG
GCAGCTGCAGGTGGGGTTCTACTCCAAGTCGTGCCCCAGCGCCGAGTCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCG
CCGCCGACTCCACCATCCTCCCCGCCCTCCTCCGGCTCCAGTTCCACGACTGCTTCGTCAGGGTACGCGCGCGCGCTCTC
CCTCGGCAGTTCGTCGGGGTAAAGTAATTTGTACCGTGTTGACGTAATGACGTGGGAATTCTCTGTGACGCCTTC-----
--TCTCAGGGGTGCGACGCGTCGGTGCTGATCAAGGGCGGGAACAACAACGCGGAGGTGGACAACAACAAGCACCAGGGG
CTCCGCGGGATGGACGTCATCGAAAACGCCAAGGCGCAGCTCGAGTCCGAGTGCCCCGGCGTCGTCTCGTGCGCCGACAT
CGTCGTCCTCGCCGCGCGCGACGCCGTCGCATTCGTG-----AGTAACATCCTCGCGCGCGCTGCGCATATCGGCATATG
CATTTGCATGCGTGGAAAGCGGGAACTGATCGTTTTCGTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACGGGG
CGCCGCGACGGGAAGGTGTCCAACGTGCGGGACGGCGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTC
CAAGTTCCGCGCCAGCGGCCTCGACGACAAGGACCTCGTCCTCCTCAGCTGTAAGCAAGCAAACCAACCCACCTCTTTCC
TTGCGTTCCCTCGATCGATCATGGAGGACCCATGTCCCTACCTAACCCGTCGACGGCCGCATGCACGCAGCGGCGCACAC
GGTGGGCACAACGGCGTGCTTCTTCATCCAGGACCGGCTCTACAAGTTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGATC
CGTCGATCCCGGACGGCTTCCTGTCGGAGCTCAAGTCCCGGTGCGCGCCGGGGGACTCCAACTCGCGCGTCTCCCTGGAC
CGCGGCAGCGAGCGCGTGTTCGACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCGGTGATCGCCTCCGACGCCGC
GCTCTACAACGACACCAGCACCGTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCC
GGCAGGACTTCGCGGACTCCATGGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTC
TGCTCCAAGTTCAACTGAGAGAGACCCATCCATGGATCCAGATTCCATTCATTGCGCTGCCGGCCGGAGTACTGGTACTG
GTTGGCTAGCTGGAGATGAAAAGCACTAGCTAGCCCATGCGGACATGCATCTCGTGGGTGCATGGCCCGGTCTCGTGGCG
CTTTCATGGC-TTTTCTTCTTCTTCAATTTATTGTGTACATGTTATTGAAAAGAGAGAGGGGAAATTTAGTGGATTCATG
TGATTCTGGCGCCAAGGTCTAGTACGTACGGCCAAGGATCTGTGCAGTTTTCTCTTTTGCAGCGGCTGGAAGCGAGATTA
AATTCATATAGCTAGGGTATA-----------------------------------------------------------
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--------------------------TATAAGATGTGCTTCTGTATGCTTGTATGTACACTACACACACCATATGTGCAA
TTAAGTGGAGGTGTAATTTATGGTCTTGTCTTGGGTAA---------TTATCTGTGCCAACAGCAATTGGAAAGAAGTGT
CAAATGTTGCAAAAACAAAATCTTCTTCTGGCATATAGGAGTACTACGTACAATCTTTGTACCACAGTCAAGTGTCGAGG
CCGTAGCAGAGATTGTCGTCGTTGCACCATGATATATTGATAGCTCTAGACGACGCGCGAGATCAAAAAAAAAAAATCAG
CCACTCAGGGACCTGGGGATTGTCGAGGACCAAATCTCGTTGAAAGAGATCCCAAGGAAATCTTTAC-TTTCGGGAGGTG
CATGGAACTGTAAGGAAGACCTCAGTTAATGCGTTTCTCCTGGGTTTACCAAATTGGCCTAGCTCCTGCTAAGTCACCGC
GAAGAAAGAAAACTCCTGTGCATATTCATGTGGTAGAATCCAAGCTGC-GGGTGCTGAATGTGTCAGATGGAGGATGCAA
ATGGGTGGCTGAAACACAT-ATTGAGTAAAAGTGTACTGCCCTGTTGAATGTTGATGGAACGGCCTTTGCTTCTATGCTC
TGTTCGGGTAGTTGGCGGAGTAGGAAGTAGGCAGTGTTAGCTGGGTTTGTCTTTATTGGGGACGAGAAC-TTTTTTTCGC
ATTGAGTAGCT
>chr4B_97
CATGATGC------------------------------------------------------------------------
-------------------------AAGCGTTTCCCTGCACGGAATTGCTCTGTCATAAAGCCCCAAAACCCCAAAATCA
GGGGAGAACTCGCACACTTTCGTAGTTGA-----------GGCAATCCGGCTGCGACCATCTCATGGCATGGCATGGCAT
GCAAGCTGCAATGCCGCAGCAGCAAATCTTTACTCACTCGCCGGCAACTTGCCGCATGCCCTTTTGCCGTGACAACTGGG
CCATAAATTGTGGCACGCTGGAGCCGCGCGCATCAATACCGGCCGGTGGCCTGCGCACATGGACGCATGGCCGGCCAGGC
TTACCATGGTCCAGGAGGAACTTCTCTCCCCGGCTATTCCCGGAACCGTGTATGGCATTCATGGCCGTGTCCCCGCAAAG
ATTGAATTGGGAGATCAACTTCTGGGGCTAGGTGGTAGATTCATCAGCTTCGCCGTACTCGACATTTTCTTTCACGTTAT
AAATTCGAAAGGACGCACGAAGAATCTATGCGGCA----CATTTCGATCAGATCTCCCACCAGAATCCTCCTCGTGAAAT
CCTCACTTGGGCTTTCATGCATGTCTTCAGTACTACA---GTAAATACTGGTCCAGATTGTTGTTCGTGAAATTATGTAT
TGCTACCTGACACGGTGACACCTGTACTCCAAATATGACAAACTTTCACCTCGGCAAGGTTATACTATCTTGTTCTAGGA
GTATGCCTGCCTGCATGCCTGCATGCTGCAGTATGCAGTTTTTTACCACTAAATGCTTGGCACCTACTCTTTGCGGTGAG
GTCAAATCATCCATGTGTTGGCTGGCCTACGGTTCTACTTCTTCACCGGACGAGAGCTTATAAAACCCCATTAACGCAGC
GCAGAGGACCTTGATCCTAGCTC--TCCTCGGGCCTTTTCTTTCTCTCTTTCTCTCGCGAGCTCCTCGCTCTCTAGATTC
TTTTCTAAGATGGGTACTGCCAGCGGTGCCGTGGCCCTGCTGCTGGTGGTGCTAGGAGCCTGCGTCTCCAGCTCCAGTGG
GCAGCTGCAGGTGGGGTTCTACTCCAAGTCGTGCCCCAGCGCCGAATCCACCGTCGCGTCCGTCGTCCGGGGAACCGCCG
CCGCCGACTCCACCATCCTCCCCGCCCTCCTCCGTCTCCAGTTCCACGACTGCTTCGTCAGGGTACGCACGCGCGCTCTC
CCTCGGCAATTCGCCAGGGTAAAGGCAGTAATTCGTCGTGTGTT---TGACGTGGGAATTCGGCTGGTTCTGCGCCTCTC
GATCTCAGGGGTGCGACGCGTCGGTGCTGATCAAGGGCGGGAGCAACAACGCGGAGGTGGACAACAACAAGCACCAGGGG
CTCCGCGGGATGGACGTCATCGAGAACGCCAAGGCGCAGCTCGAGTCGGAGTGCCCCGGCGTCGTCTCGTGCGCCGACGT
CGTCGTCCTGGCCGCGCGCGACGCCGTCGCATTCGTAAGTACAGTAACATTCTCGTGCGCGCTGCGCATATGCCTGCATG
GATGGC-----------AGTGGGAATTGATCGGTTTCTTTGGTGCAGACCGGCGGGCCGTCGTTCGACGTGCCGACAGGG
CGCCGCGACGGGAAGGTGTCCAACGTGCGGGACGCTGACGTGCTGCCGGACGTGCGCGACTCCGCCCAGGTGCTCCGCTC
CAAGTTCCGAGCCAGCGGCCTCGACGACAAGGACCTCGTCCTCCTCAGCTGTAACCAAGCAAACCAACCCACCTCTTTCC
TTGCGCTCCCTCGGTCGATCATGAACCCCTGTC-------CCTAACCCGTCGATGGCGGCATGCATGCAGCGGCGCACAC
GGTGGGCACGACGGCGTGCTTCTTCATCCAGCAGCGGCTCTACAGCTTCCCGCTCCCGGGCGGCGGGCTCGGGTCAGACC
CGTCGATCCCGGACGGCTTCCTGTCAGAGCTCAAGTCCCGGTGCGCGCCGGGAGACTCCAACTCGCGCGTCTCCCTGGAC
CGCGGCAGCGAGAGCGTCTTCGACACCTCCATCCTCCGCAACATCCGCAACGGCTTCGCGGTCATCGCCTCCGACGCGGC
GCTCTACAACGACACCAGCACCGTCGACGTGGTGGACTCCTACTCGGGCCTCCTCAGCACCATCTTCGGGCCCTACTTCC
GCCAGGACTTCGCGGACTCCATGGTGAAGATGGGCAGCATCGGCGTGCTCACCGGCGCCAGCGGGGAGGTCAGGAAGGTC
TGCTCCAAGTTCAACTGAGAGAGACCCGTCCATGGATCCAGATTCCATTCATTGCGCTGCCGGCCGGA------GTACTG
GTTGGCTAGCTGGAGATGAAAAGCACTAGCTAGCCCATGCGGACATGCATCTCGTGGGTGCATGGCCCGGTCTCGTGGCG
CTTTCATGGC-TTTTCTTCTTCTTCAATTTATTGTATACATGTTATTGAAAAGAGAGAGGGGAAATTTAGTGGGTTCATG
TGATTCTGGCGCCAAGGTCTAGTACGTACAGCCAAGGATCTGTGCAGTTTTCTCTTTTGCAGCGGCCGGAAGCGAGATTA
AATTCATA--GCTAGGGTATAAGATGTATGGCGCGGAGTGTTGGCCGACTAAAAGATGACATGTTCAACAGTTAGGTGTG
GCGAAGATGCGTATGTTGAGATGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATATACGAGATAGAGT
TGGGGTAGCACCAATTGAGGAGAAGCTTGTCCAACATCGTTTGAGATGGTTTGGGCATATTCAGCGCAGGCCTCCAGAAG
CTCCAGTGCATAGCGGACGGCTAAAGCGTGCGGAGAATGTCAAGAGAGGGCGGAGTCGACCGATTTTGACATGGGAGGAG
TCCGTTAAGAGAGACCTGAAGGATTGGAGTATCGACAAAGAGCTAGCTATGGACAGGGGTGCGTGGAAGCTTGCTATCCA
TGTGCCAGAGCCATGAGTTGGTTGCGAGATCTTATGGGTTTCACCTCTAGCCTACCCCAACTTGTTTCGGACTAAAGGCT
TTGTTGTTGTTGTTGTTGTTGTAGGGTATAAGATGTGCTTCTGTATGCTTGTATGTACACTACACACACCATATGTGCAA
TTAAGTGGAGGTGTAATTTACGGTCTTGTCTTGGATTTTTGGGGTATTTATCTGTGCCAACTGCAATTGGAAAGAAGTGT
CAAATGTTGC-AAAACAAAATCTTCTTCTGGTATATAGGAGTACTATGTACAATCTTTGTACTACAATCAAGTGTCGAGG
CCGTAGCAGAGCTCGTCGTCGTTGCT------------------------------------------------------
--ACTCAGGGACCT-GGGATTGTCGAGGACAAAATCTCGTCGAAAGAGCTCCCAATGGAATCTTTAC-TTTCACGAGGTG
CATGGAACTGTAAGGAAGACCTCAGTTAATGCGTTTCTCCTGGGTTTACCAAATTGG----------------TCACCGC
GAAGAAAGAAAACTCCTGTGCATATTCATGTGGTAGAATCCAAGCTGC-GAGCGCTGAATGTGTCAGCTGGAGGAGGCAA
ATGGGTAGCTGCAACATATCATTGAGTGAAAGTGTACTGCCCTGTTGA-------TGGAATGGCCTTTGCTTCTATGCTC
TGTTCGGGTAGTTGGCGGAGTAGGAAGTAGGCAGTGTTAGCTGGGTTTGTCTTTATTGGGGACGAGAACTTTTTTTTCGC
ATTGAGTAGCT
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----------------------------------------------------------------
------------------------------S------------------------S------------------------
-----------------S--------------------------------------------------------------
------------------------------------S----S--------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------S-----------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------S--------------------------------------------SS-
S---------------------------------------------------------S---------------------
-----------------------------------------------------------S------S-------------
--------------------------------------------------------------------------------
----------------------------------S--------------------------------S------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------------------------------------S---S------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--S-----
------------------S--S----S-S-------------------S-------------------------------
---------S-----S-----------------------------S----------------------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------------S--------------------
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-------------------------S-----S------------------------------------------------
----------------------S---------------------------------------------------------
----------S---------------------------------------------------------------------
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-------------------------------------------S-------S----S-S------------S--------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
-SS---------------------------------------------S-------------------------------
S-----------S--------------------------------------------S---------------S-----S
----SS---------SS---S-------S-----S---------------------------------------------
-----------
>forward_961
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-------------------------------------------------------------AAAACCCCATTAACGCCAC
C-------------------------------------------------------------------------------
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>reverse_1930
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---------CACGGCATGCTTCTTCATCC---------------------------------------------------
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>forward_1835
--------------------------------------------------------------------------------
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------------------------------------------------------CCAAGCAAACCAACCCATCTG-----
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>reverse_3766
--------------------------------------------------------------------------------
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-----TGGTAGTTGGGAGAGCAGGA-------------------------------------------------------
-----------
