>input_sequence_55948
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--------------------------------------------------------------------ATGGCGGGGGTT
GTGACGACGACTCTGCCTTTGCGGCTCGTGGTGGCCGTGCTTCTTGCGTTTT---TGGCCACCACGGCGTCGGCGTCC--
-GCGCCGGCCAAGTCAAACATGAGCAGCAGCAGCTCCTGCCGGCGTCTGTTCAGCTTCGGCGACTCGCTGATCGACACCG
GCAACTTCATA---CACTACTCCAAGGCGCCGGGCTCCGTGTCGCGGTCGCCCTACGGCGAGACCTTCTTCGGCCGCCCC
ACCGGCCGCTGGTCCGACGGCCGCCTCATCGTCGACTTCATCGGTACTCCTTCACATGCATGC-------------ATGC
ATGCTTAATTAATCTGCACTT----------------------GTACTTTAACACG--CATGACTGATGTGAGTGTGGGG
T---G-----------------------TACGTGCATGCAGTGGAGAGGCTGGGGTTCCCGTACTGGCCGGCGTACCTGC
AGGCG---------AAGTCGCGGGCGACGAAGGGCGACTTCCGCTACGGCGCCAACTTCGCAGTGGCGAGCGGCACGGCG
CTCAACCAGCTCCTCTTC--------------------------------------------------------------
----------------------------------------------------------------------AGGAAGAAGC
ACCTCAACGTGGA---------------CCAGATCACCCCCTACTCCTTGGGCATCCAGATCGGGTGGTTCAAGAAAGTG
CTGGCGGCGATCGCCTCCACCGACGAGC----------------------------------------------------
--------------------------------------------------------------------------------
---AGCGGCGGGAGATCATGGAGAGCTCGCTGTTCCTGGTGGGGGAGATCGGCGCCAACGACTACAACCACCCCTTCTTC
CAGAACAGGACGCTCGGGTTCGTCCGGCCGCTGGTGCCCCGGGTGATCCGCTCCATCGCGCTCTCCGTGGAGGCCCTCAT
CAAGCTGGGAGCCAGGAACATCTACGTGCCGGGCATCTTCCCGATGGGCTGCGTCCCGCGGTACCTCTACTTCTACCGCG
GCGGCGAGCCCGGCGACTACGACTCCGCCGGCTGCCTCCGGTGGCTCAACGGCCTCACCGCCGACAACAACCGCATGCTC
AAGGGCAGGCTCCGCGAGCTCGGCCGCGCCCACCCCGGCGTGTCCATCACCTACGTGGACTACTACAACGAGGTGCTCAG
CCTCATCACCAACCCGGCGG------------------------------------------------------------
--------------------------------TGAACGGGGTCGCCGCGGGGACGG-GCTGCACGCGTGCTGCGGCGGCG
GTGGGCCGTACAACGCCAACCTCACCCTCCACTGCTCGGACCCGTGGGTGGTGCCGTGCCCGGACCCGGCCAAGTACGTG
TCGTGGGACGGCCTGCACATGACGGAGGCGATGTACAAGATCATGGCCCGCGGGATGCTCGACGGCCCCTTTGCCAAGCC
GTCCATCATGT---CCAAATACAACCACAGCTAG----------------------------------------------
--------------------------------------------------------------------------------
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---
>chr2D_1_TraesCS2D01G149900
TTCACCCCCAAAAAAATATAGGCTATTATTATCTTTAGTTGACAAGAAAACATGAATGGTGTATTGGTACGGGTCGGCGT
TAGCTATCTTGACTTCGTAAGTTTGAGACCAGGCGGGGACTGTTTTGTATCGTTTAATTTCCCTTTATTTTGACATGTGA
GGCCCACTCGTCATGGAGACGTACATTAACGCTAATCAAAATACGTTGTGATGTGAGCGCATTATACATCTGTGGATTGG
ATTAGCATCGTATTTGCACGCTCGCTCCAAGTTTTAGAATCAGTTCGGCATATTTTTCAAGTTTATGCACTAAAGTGAAC
ATTGATGGCAAATTTAAGCACCATGGTGATATTACCTCGTTTATAACCTTCAACAAGTATGTTTTTGCTCATATTCCGCA
AAAAAAGAAAGAAAGAAGAGATGTGTCCTGCTTGCAGACATGCTAGTACCACCTGTATTAGTTTATAATCTTCAATAGGA
AAACTGGTCACTGATGCCCAGTGGCAGATCAATCAGACCCGTACTTCATTACGCACAGTGAGCTACTGTCCCTCCCATCA
ACTACCAAACTGGCGCACGAATTGACGAGATCGCAATGGATGGATGC------TCCCCATCGGTCGATCCCGTGGAGATC
TCCATCACATCTGCACAAGTCAACGGCCGATTCGATCCTTCGAATCAAATCGAATATCTTCACGCCATTGCCACCCGTTG
GCCAAGAGTTCCATTTTCTTGCAAGTAATTTAAACA----GCTCGTGCAACACACCGACGCTTCGCACTCGTGC------
-GCATACGCGTCGCCATGCCCGGTCCGATTTAGAAATGTTGGAGGCCGGAGACCCCGAGCAACAGTTGCCGCATCTGTCC
ATGTCTTCCGCCATCCATGATTGATGTGGGCACACGATACCTACCAGACCTACATCACATATAGTAGCCTCAGCTCCGAG
CTCCGGCCGGCCAGA-----------AGTCTCGAGTTTCTACCCGTCGGTGTCGATCTCATTCCCACCATGGCGGGGGTT
GTGACGACGACTCTGCCTTTGCGGCTCGTGGTGGCCGTGCTTCTTGCGTTTT---TGGCCACCACGGCGTCGGCGTCC--
-GCGCCGGCCAAGTCAAACATGAGCAGCAGCAGCTCCTGCCGGCGTCTGTTCAGCTTCGGCGACTCGCTGATCGACACCG
GCAACTTCATA---CACTACTCCAAGGCGCCGGGCTCCGTGTCGCGGTCGCCCTACGGCGAGACCTTCTTCGGCCGCCCC
ACCGGCCGCTGGTCCGACGGCCGCCTCATCGTCGACTTCATCGGTACTCCTTCACATGCATGC-------------ATGC
ATGCTTAATTAATCTGCACTT----------------------GTACTTTAACACG--CATGACTGATGTGAGTGTGGGG
T---G-----------------------TACGTGCATGCAGTGGAGAGGCTGGGGTTCCCGTACTGGCCGGCGTACCTGC
AGGCG---------AAGTCGCGGGCGACGAAGGGCGACTTCCGCTACGGCGCCAACTTCGCAGTGGCGAGCGGCACGGCG
CTCAACCAGCTCCTCTTC--------------------------------------------------------------
----------------------------------------------------------------------AGGAAGAAGC
ACCTCAACGTGGA---------------CCAGATCACCCCCTACTCCTTGGGCATCCAGATCGGGTGGTTCAAGAAAGTG
CTGGCGGCGATCGCCTCCACCGACGAGC----------------------------------------------------
--------------------------------------------------------------------------------
---AGCGGCGGGAGATCATGGAGAGCTCGCTGTTCCTGGTGGGGGAGATCGGCGCCAACGACTACAACCACCCCTTCTTC
CAGAACAGGACGCTCGGGTTCGTCCGGCCGCTGGTGCCCCGGGTGATCCGCTCCATCGCGCTCTCCGTGGAGGCCCTCAT
CAAGCTGGGAGCCAGGAACATCTACGTGCCGGGCATCTTCCCGATGGGCTGCGTCCCGCGGTACCTCTACTTCTACCGCG
GCGGCGAGCCCGGCGACTACGACTCCGCCGGCTGCCTCCGGTGGCTCAACGGCCTCACCGCCGACAACAACCGCATGCTC
AAGGGCAGGCTCCGCGAGCTCGGCCGCGCCCACCCCGGCGTGTCCATCACCTACGTGGACTACTACAACGAGGTGCTCAG
CCTCATCACCAACCCGGCGG------------------------------------------------------------
--------------------------------TGAACGGGGTCGCCGCGGGGACGG-GCTGCACGCGTGCTGCGGCGGCG
GTGGGCCGTACAACGCCAACCTCACCCTCCACTGCTCGGACCCGTGGGTGGTGCCGTGCCCGGACCCGGCCAAGTACGTG
TCGTGGGACGGCCTGCACATGACGGAGGCGATGTACAAGATCATGGCCCGCGGGATGCTCGACGGCCCCTTTGCCAAGCC
GTCCATCATGT---CCAAATACAACCACAGCTAGCTACGCACTATACAGTACTACATCGTGTGCTGAATAAT----TCAT
TCGCTTGGGATTTTTCTCGGTTTATCACATTTTATTGCGAGCATCACATGGTGTGCTGAATAATTCTATTTCCGAATAAA
TCAAG-ACTATATAGTATAAAAAAGAACTATATTGTTACAATATTCTATTT----CCAATAGTTTTTTTAAATACGGTAC
AGACGCATACGCTCATACATACGCACGAGAACGTCCCCTCCCATTGAGGGCACATCGCCGAAAGACATGGGATAAATTCA
TGAAAATACGAGCATTAATGTCAAGTCTAGGACTTGAAGAAATACCACTGTTCTCCTAACTATTAAACCACGGGTTGGTT
CGCTGCTTGACCCAATAGCTAAATCCAATAAATCATGCCCATGTATGGCAAGAGGTGGAGGTGCAATCTTTAATCCAATC
CCGAAAGGTGAGGTGACACGAGACTATTCATTCTCTTATATATACAACCTGGCAGCCATCGCAAATAACACAACAAATCG
ACTTAAGGTTTTTGTCTCCTCTCACTGTTTGAGCCGTCATCATAGTCTATTCCATCCCAAACATCGGCGTGCTCGCAAGT
AGGAGAACGTGTCTATGAAACCTCTCGCTCCTGTGTCCTACATTAGAAGAGAAGAGGGAAAATTAGCTTTTAGGAAACTC
TACGCGTGACTGCTCATATTTGTCACTGCGGATCATCTTCCTTCCAAGTCAGGTGGTGTCACGCATTGTTGCCTCGGCCA
TCCATTTCGTGTCATCAATACGTGCGTTGTATCTGATTTAATCTTTAATTAGGCTATTGTTGCAGAGAGAATATCCTATG
AAAACCAAGTTTCAAAGAAAACTTCGTAGAAACCAAATTTAAAAGTTTCAAAAAAATTTGAGAAAAATACAGGATGTTAA
GAGGGTGATGTTCAATTGGCATGAAAATTTTCAAGTTCAAACACATTACCATTTACGAGCTATGAAAAGAACAAATTCAG
CAA
>chr2B_468
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATCTTCAATAAGA
AAACTGGTCACTGATGCTCGCCGCCAGATCAATCAGACCCGTACTTAATTACGCATAGTGAGCTACTGTTG-TCCCATCA
ACTGCCAAACTGCTTCACGAATTGACGAGATCGCAATGGATGGATGCGGATGCTCTCCATCGGTCTATCCCGTGGAGATC
TCGATCACATCTGTATAAGTCAACGGCCGATTCGATCCTTCGAATCGAATC-----TCTTCACGCCATTGGCACCCGTTG
GCCAAGAGTTCCATATTCTTGCAAGTAATTTAAACAAGCAGCTCGGGCAACACACCGACGCTTCGGAGTCGTGGTGGCAT
TGCATACACGTCGCCATGCTCGCTCCGATTTTAAAATGCTCGAGGCCACAGACCGCGAGCAACAGCTGCCGCGTCTGTCC
ATTTATTCCGTCATCCATGATTGACGTGGGTACCCTCAATCACATATAC------------TAGTAGCCTCAGCTCTGAG
CTCCGGCCGGGCAGGAGTGAGCAGTGAGTCTCGAGTTTCTTCCCGTCGGT--CGATCTCATTCCCACCATGGCGGGGGCT
GTGACGAAGACTACGCCTTTGCGGCTCGTGGTGGCCGTGCTTCTTGCGTTTT---TGGCTGTCACGGCGTCGGCGTCC--
-GCGCCGGCGAAGGTAAACATGAGCAGCAGCAGCTCCTGCCGGCGCCTGTTCAGCTTCGGCGACTCGCTGATCGACACCG
GCAACTTCATA---CACTACTCCAAGGCGCCGGGCTCCGTGTCGCGGTCGCCCTACGGCGAGACCTTCTTCGGCCGCCCC
ACCGGCCGCTGGTCCGACGGCCGCCTCATCGTCGACTTCATCGGTACTCCTTCACATGCATGC-------------ATGC
ATGCTTAATTAATCCGCACTTCGTTATAGCAGTTGTACTCCTTGTACTCTAACATGCACATGACTGATGTGAGTGCGTAC
GGCCG-----------------------TACGTGCATGCAGTGGACAGGCTGGGGTTCCCGTACTGGCCGGCATACCTGC
AGGCG---------AAGTCGCCGGCGACGAAGGGCGACTTCCGCTACGGCGCCAACTTCGCAGTGGCCAGCGGCACGGCA
CTCAACCAGCTCCTCTTT--------------------------------------------------------------
----------------------------------------------------------------------AGGAAGAAGC
ACCTCAACGTGGA---------------CCAGATCAGCCCCTACTCCCTGGGCATCCAGATCGGGTGGTTCAAGAAAGTG
CTGGCCGCGATCGCCTCCACCGACGTCC----------------------------------------------------
--------------------------------------------------------------------------------
---AGCGGCGGGAGATCATGGCGAGCTCGCTGTTCCTGGTCGGCGAGATCGGCGCCAACGACTACAACCACCCCTTCTTC
CAGAACAGGACGCTCGGGTTCGTCCGGCCGCTGGTGCCCCGGGTGATCCGGTCCATCGCGCTCTCCGTGGAGGCCCTCAT
CAAGCTGGGCGCCAAGAACATCTACGTGCCGGGCATCTTCCCGCTGGGCTGCGTCCCGCGGTACCTCTACTTCTACCGCG
GCGGCGAGCCCGGCGACTACGACTCGGCCGGATGCCTCCGGTGGCTCAACAGCCTCACCGCGGACCACAACCGCATGCTC
AAGGGCAAGCTCCGTGAGCTCGGCCGCGCCCACCCCGGCGTGTCCATCACCTACGTGGACTACTACAACGAGGTGCTCAG
CCTCATCACCAGGCCGGCGG------------------------------------------------------------
--------------------------------TGAACGGGTTCGCCGCGGGGACGGTGCTGCACGCGTGCTGCGGCGGCG
GCGGGCCGTACAACGCCAACCTCACCCTCCACTGCTCGGACCCGGGGGTGGTGCCGTGCCCGGACCCGGCCAAGTACGTG
TCGTGGGACGGCCTGCACATGACGGAGGCGGTGTACAAGATCATGGCGCGCGGGATGCTCGACGGCCCCTTCGCCACGCC
GTCAATCATGT---CCAAGTGCAACCACAGCTAGCTGCGCACTATACAA---TACATCGTGTGCTACAAGGTCGTCTCAT
TCGCTTGGGATTTTTTGGGTTT----ACATTTTGCTGCGAGCATCACATGGTGTGCTGAATAATTCTATTTCTGAACATA
TCAAGTACTATATAGTATAGAAAAGAACTATATTGTGACAATATTTGCGTGTGGCCCAATAGCTTTTTTGAACACCGTAC
AAACGCAGAAGCTCATCCATACGCAC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr2B_959
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AGTCTCGAGTTTCTTCCCGTCGGTG--GATCTCATTCCCACCATGGCGGGGGCT
GTGACGAAGACTACGCCTTTGCGGCTCGTGGTGGCCGTGCTTCTTGCGTTTT---TGGCTGTCACGGCGTCGGCGTCC--
-GCGCCGGCGAAGGTAAACATGAGCAGCAGCAGCTCCTGCCGGCGTCTGTTCAGCTTTGGCGACTCGCTGATCGACACCG
GCAACTTCATA---CACTACTGCAAGGCGCCGGGCTCCGTGTCGCGGTCGCCCTACGGCGAGACCTTCTTCGGCCGCCCC
ACCGGCCGCTGGTCCGACGGCCACCTCATCGTCGACTTCATCGGTACTCCTTCACATGCATGC-----------------
ATGCTTAATTAATCCGCACTTCGTTGTAGCAGTTGTACTCCTTGTACTCTAACATGCACATGACTGATGTGAGTGCGTAC
GGCCG-----------------------TACGTGCATGCAGTGGACAGGCTGGGGTTCCCGTACTGGCCGGCATACCTGC
AGGCG---------AAGTCGCCGGCGACGAAGGGCGACTTCCGCTACGGCGCCAACTTCGCAGTGGCCAGCGGCACGGCA
CTCAACCAGCTCCTCTTTAGGCTGTGTTCGGTTGGGAGGGATTTGGAGGGGGTTTGGCAGGGATTGAAATGGATTTAATC
CCTTACAAGTCAAAATCTCTTCAAATCCCCTCCAATCCTCTTGTGAAGGGGTGTAACCGAACAAGGCCTTAGGAAGAAGC
ACCTCAACGTGGA---------------CCAGATCACCCCCTACTCCCTGGGCATCCAGATCGGGTGGTTCAAGAAAGTG
CTGGCCGCGATCGCCTCCACCGACGTCC----------------------------------------------------
--------------------------------------------------------------------------------
---AGCGGCGGGAGATCATGGCGAGCTCGCTGTTCCTGGTCGGCGAGATCGGCGCCAACGACTACAACCACCCCTTCTTC
CAGAACAGGACGCTCGGGTTCGTCCGGCCGCTGGTGCCCCGGGTGATCCGGTCCATCGCGCTCTCCGTGGAGGCCCTCAT
CAAGCTGGGCGCCAAGAACATCTACGTGCCGGGCATCTTCCCGCTGGGCTGCGTCCCGCGGTACTTCTACTTCTACCGCG
GCGGCGAGCCCGGCGACTACGACTCGGCCGGATGCCTCCGGTGGCTCAACGGCCTCACCGCGGACCACAACCGCATGCTC
AAGGGCAAGCTCCGTGAGCTCGGCCGCGCCCACCCCGGCGTGTCCATCACCTACGTGGACTACTACAACGAGGTGCTCAG
CCTCATCACCAGGCCGGCGG------------------------------------------------------------
--------------------------------TGAACGGGTTCGCCGCGGGGACGGTGCTGCACGCGTGCTGCGGCGGCG
GCGGGCCGTACAACGCCAACCTCACCCTCCACTGCTCGGACCCGGGGGTGGTGCCGTGCCCGGACCCGGCCAAGTACGTG
TCGTGGGACGGCCTGCACATGACGGAGGCGGTTTACAAGATCATGGCGCGCGGGATGCTCGACGGCCCCTTCGCCACGCC
GTCAATCATGT---CCAAATGCAACCACAGTTAGCTGCGCACTATACAA---TACATCGTGTGCTACAAGGTCGTCTCAT
TCGCTTGGGATTTTTTGGGTTT----ACATTTTGCTGCGAACATCACATGGTGTGCTGAATAATTCTATTTCTGAACAAA
TCAAGTACT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr2B_1020
--------------------------------------------------------------------------------
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-------CGACTCTGCCTCTGCAGTTCGTGGTGGCCGCGTTCCTTGCGCTGTCTGTGGCCACGACAGCGTCGGCGTCACC
TGCGCCGGCA------------AACCGGAGCAGCTGCTACAAGCGTATGTTCAGCTTCGGCGACTCTCTGATCGACACCG
GCAATTTCATCGTCCACTACGCCAATGCGTCGGGCCCCGTCCTGGCGTTGCCATACGGCGAGACCTTCTTCGGACGCCCC
ACCGGCCGCTGGTCCGACGGCCGCCTCGTCGTCGACTTCATCGGTAAGTACTTCCGTTCCATGACGACGACAGACGAGGC
GTGCTTAATTACTGCCCATCTTAATGTACG-----------------------ATA--CATAATGAATAATGAATAATGA
ATATGCGTACATGCATGAAAATTGGTACTACGTACGTGCAGTGGAGAGGCTGGGGTTCCCGTACTGGCCGGCGTACCTGC
AAGCGGCGGCAGGGAAGTCGCCGGCGGAG------GAGTTCCGGTACGGCGCCAATTTCGCGGTGGCGGCCGCCACGGCG
TTGAGCCAGGAGTTCTTC--------------------------------------------------------------
----------------------------------------------------------------------ATTAAAAAGA
ACCTCAGCGTTGACCAGTTCCCA------CCGATCCCCCCCTACTCCCTCGACGTCCAGATCGGCTTGTTCAAGAAAGTG
CTTGCCGCGCTCGCCTCCACGGACCAAGG------------------TAGAACAAAATCTATG---------GCATATAT
ATGCATGCGCCATGGCTACGCAAACGCACCGAGCATGAATATTACTCTTCTAACCACACCATCTCGGACATGCTCAC--G
CAGAGCGGAAGGAGGTGATGGCGAGCTCGCTGTTCCTGGTGGGAGAGATCGGCGCCAACGACTACAACCACCCCTTCTTC
CAAAACAAAACAGTCGAATGGGTCAGGCCCATCGTGCCCCAGGTCATCAGGTCCATCGCTCTCTCCATAGAGGCCTTGAT
CGAGCTGGGCGCCAAGACCATGTACGTGCCGGGCATCTTCCCGCTGGGGTGCACCCCGCAGTTCCTCTTCCTCTTCCCCG
GCGACGACCGCGACCCTG------CCACGGGCTGCCTCCGGTGGCTCAACGACCTTGTCCTCGTCCACAACCGCATGCTG
AAAGCCAAGCTCGAGGAGCTCCGCCGCGACCATCCCGGCGTGTCCATCACCTACGTCGACACCTACGACGACGTGCTCAC
CCTCATCACCAAGCCGGCGG------------------------------------------------------------
--------------------------------AGAACGGGTTCGCCGTGGAGACGGTGCTGAAGGCGTGCT---------
--------------------------------------------------------------------------------
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---
>chr3D_1115
--------------------------------------------------------------------------------
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----------------------------AGCAGCTGCTACAAGCGTCTATTCAGCTTCGGCGACTCTCTGACCGACACCG
GCAACTACATCATCCACTACGCCAACGCGTCAGGGCCCGTCCTAGCGCTGCCATACGGCGAGACCTTCTTCGGCCGCCCC
ACCGGCCGATGGTCCGACGGCCGCCTCATCATCGACTTCATCGGTAAGTGTATG-----------GACGAACGTCGACAT
CTGCTTAGTAC--------------------------------------TTACATG--CATGATGCATGTGAATTGTTT-
----------------------------------CGTGCAGTGGAGAGGCTGGGGTTCCAGTACTGGCCGGCGTACCTGA
AGGGGGCAGCCGGGAAGTCGCCGGTGGAG------GAATTCCGGTACGGCGCCAATTTCGCGGTTGCGGCCGCCACGGCG
CTGAGCCAGGATTTCTTC--------------------------------------------------------------
----------------------------------------------------------------------CTGAAAAAGA
ACCTCAGGGTGGACCTGCTTACCCCGAGCCCGATCCCCCCTTACTCCCTCGGCGTCCAGATAGACTTGTTCAAGAAAGTG
CTCGCCATGCTCGCCTCCACGGACCAAGGTAACGTGTACCACATAAGTAGAACAAAACCAGAGCAATTAAGTGCACGCAT
G-----GCGCCATGGCTACGCAAACGCGCTGACCATAC----TA-TC-TCCTACCATATCATCACCGCATCACGGCCATG
CAGAGAGGAAGGAGGTGATGGCGAGCTCGCTGTTCCTGGTGGGGGAGATCGGCCTCAACGACTACAACCACCCCTTCTTG
CAGAACAAGACCCTGGAATGGGTCAGGCCCCTCGCGCCCCAGGTCATCGAGTCCATCGTTCTGTCCATCGAGGTTCTGAT
CGAGCTGGGCGCCAAGACCATGTATGTGCCGGGCATCTTCCCGCTGGGGTGCACCCCGCTGTACCTCTCCCTCTTCCCCG
GCGACGACCGCGACCCTG------CCACGGGCTGCCTCCGGGGGCTCAACGACCTCATCCTCGTCCACAACCACATGCTG
GAAGCCAAGCTCGAGGAGCTCCGCCGCGACCACCCCGGCGTGTCCATCACCTACGTCAACTCCTACGACAACGTCCTCGG
CCTCATCACAGCGCCCACCCAAAACGGCAAGCGCTAGCAAGAATCCTACCGTGGCAACACACATCATGTCCAGAACGGCT
TTGATCTTACTGTA-TATTTTCGCGCTGTGCATGACAGGGTTCGACAAGGAAACGGTGCTGGAGGCGTGCTACCCCGTCT
TCATTTCCGGGT------------------------------CGGCGGCGGTGCCGTGCCTGGACCCGTCGAGGCACGTG
AATTTCGACGGCCTGCACATGACGGAGGCGGCGTACAAGCTCATGGCCCGCGGGATGCTCGACGGCCCGTTCGCCGCGCC
GCCCATCATGT---CCACATGCAACCACAGCTGCTA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr2B_1132
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------TCTATTCACCTTCGGTGACTCTCTGATCGACACCG
GCAACTTCATCGTCCACAGCTCCACTGATTCGGGGCCCGTCCTGGAGTTGCCATACGGCGAGACCTTCTTCGGCCGCCCC
TCCGGCCGCTGGTCCGACGGCCGCCTCGTCGTCGACTTTATCGGTGAGTTCTT-----------CGACGACACATCGACA
T--CTCATTAC--------------------------------------GTGCATG--CATAATGAATGATAATCGGTAC
GA------------------------------TACGTGCAGTGGAGAAGCTGGGGTTCCCGTACTGGCCGGCGTACCTGC
AGGCGGCAGCCGGGAAGTCTCCGGCGGAG------GAGTTCCGGTACGGCGCCAATTTCGCGGTGGTGGCCGCCACGGCG
CTGAGCCAGGATTTCTTC--------------------------------------------------------------
----------------------------------------------------------------------ATGAAGAAGA
ATCTCAGCGTTGACCAGTTTCCA------CCGATCCTCCCCTACTCTCTCGACGTCCAGATCGGCTGGTTCAAGAAAGTG
CTCGCCGTGCTCGCCTCCACGGACCAAGGTAACG-------CGTAGCTTGAACAAAATCCGTG---------GCATGCGT
G-----GCGCCATGGCCACCCAAACGCACTGACCATGGATATTA-TC-TCCTACCACACCATCACGGTCATGCACGTATG
CAGAGAGGAAGGAGGTGATGGAGAGCTCGCTGTTCCTGGTGGGGGAGATCGGCGCCAACGACTACAACCATCCCTTCTCG
CGGAACAAGACGCTTGAATGGGTCAGGCCCCTCGTGCCACAGGTCATCAGCTCCATCGCTCTGTCCATCAAGGCCCTAAT
CGAGCTGGGCGCCAAGACCATGTTCGTGCCGGGCATCTTCCCGCTGGGGTGCACCCCGCAGTACCTCGCACTCTTCCCCG
GCGACGACCGCGACCCTG------CCACGGGCTGCCTCTGGTGGCTCAACGACCTCATCCTCCTCCACAACCACATGCTG
GAAGCAAGGCTCGAGGAGCTCCGCCGCGACCACCCCAGTGTGTCCATCACCTATGTCGACTCCTACGACAACGCCCTCGG
CCTCGTCACC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---
>chr2D_1369
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TACGTACGTGCAGTGGAGAGGCTGGGGTTCCCGTACTGGCCGGCGTACCTGC
AAGCGGCGGCAGGGAAGTCGCCGGCGGAG------GAGTTTCGGTACGGCGCCAATTTCGCGGTGGCGGCCGCCACGGCG
TTGAGCCAGGAGTTCTTC--------------------------------------------------------------
----------------------------------------------------------------------ATTAAAAAAA
ACCTCAGCGTTGACCAGTTCCCA------CCGATCCCCCCCTACTTCCTCGACGTCCAGATCGGCTTGTTCAACATAGTG
CTCGCCGCGCTCGCCTCCACAAACCAAGGTACT--------------TAGAACAAAATCTATG---------GCATATAT
ATGCATGCGCCATGGCTACGCAAACGCACCGAGCATGCATATTA-TCTTCTAACCACACCATCTCGGCCATGCTCAC--G
CAGAGCGGAAGGAGGTGATGGCGAGCTCGCTGTTCCTGGTGGGAGAGATCGGCGCCAACGACTACAACCACCCCTTCTTC
CAAAACAAAACAGTCGAATGGGTCAGGCCCATCGTGCCCCAGGTCATCAGGTCCATCGCTCTCTCCATCGAGGCCTTGAT
CGAGCTGGGCGCCAAGACCATGTACGTGCCGGGCATCTTCCCGCTGGGGTGCACCCCGCAGTTCCTCTTCCTCTTCCCCG
GCGACGACCGCGACCCTG------CCACGGGCTGCCTCCGGTGGCTCAACGACCTTGTCCTCCTCCACAACCGCATGCTG
AAAGCCACGCTCGAGGAGCTCCGCCGCGACCACCCCGGCGTGTCCATCACCTACGTCAACACCTACGACGACGTGCTCAC
CCTCATCACCAAGCCGGCGG------------------------------------------------------------
--------------------------------AGAACGGGTTCAGCGTGGAGACGGTGCTGAAGGCGTGCT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr3B_1627
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------ATGGCGAGCTCGCTGTTCCTGGTGGGGGAGATCGGCCTCAACGACTACAACCACCCCTTCTTG
CAGAACAAGACCATGGAATGGGTCAGGCCCCTCGTGCCCCAGGTCATCAGGTCCATCGTTCTGTCCATCGAGGCTCTGAT
CGAGCTGGGCGCCAAGACCATGTACGTGCCGGGCATCTTCCCGCTGGGGTGTACCCCGCTGTACCTCTCCCTCTTCCCCG
GCGACGACCGCGACCCTG------CCACGGGCTGCATCCGGGGGCTCAACGACCTCATCCTCGTCCACAACCACATGCTG
GAAGCCAAGCTCGAGGAGCTCCGCCGCGACCACCCCAGCGTGTCCATCACCTACGTCAACTCCTACGACAACGTCCTCGG
CCTCATCACAGCGCCCACACAAAACGGCAAGCCCTAGAAAGAATCCTACCATGGCAACA--CATCATGTCCAGAATGGCT
TTGATCTTACTGTA-TATTTTCGTGCTGTGCATGACAGGCTTCGACAAGGAAATGGTGCTGGAGGCGTGCTACCCCGTCT
TCATTTCCGGGT------------------------------CGGCGGCGGTGCCGTGCCTGGACCCCTCGAGGCACGTG
AATTTCGACGGCCTGCACATGACGGAGGCGGCGTACAAGCTCATGGCCCGCGGGATGCTCGACGGCCCGTTCGCCGCGCC
GCCTATCATGT---CCACATGCAACCACAGCTGCTA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>chr3A_1632
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------GAGCTCGCTGTTCCTGGTGGGGGAGATCGGCCTCAACGACTACAACCACCCCTTCTTG
CAGAACAAGACCCTGGAATGGGTCAGGCCCCTCGTGCCCCAGGTCATCAGCTCCATCGTTCTGTCCATCGAGGCTCTGAT
CGAGCTAGGCGCCAAGACCATGTATGTGCCGGGCATCTTCCCGCTGGGGTGCACCCCGCTGTACCTCTCCCTCTTCCCCG
GCGACGACCGCGACCCTG------CCACGGGCTGCCTCCGGGGGGTCAACGACCTCATCCTCGCCCACAACCACATGCTG
GAAACCAAGCTTGAGGAGCTCCGCCGTGACCACCCCGGCGTGTCCATCACCTACGTCAACTCCTACGACAACGTCCTCGG
CCTCATCACAGCGCCCACCCAAAACGGCAAGCGCTAGCAAGAATCCTACCATGGCAACA--CATCATGTCCAGAACGGCT
TTGAT-TTACTGTATTATTTTCGTGCTGTGGATG-CAGGGTTCGACAAGGAAACGGTGCTGGAGGCGTGCTACCCCGTCT
TCATTTCTGGGT------------------------------CGGCGGCGGTTCCGTGCGTGGACCCGTCCAAGCACGTG
AATTTCGACGGCCTGCACATGACGGAGGCGGCGTACAAGCTCATGGCCCGCGGGATGCTCGACGGCCCGTTCGCCGCGCC
GTCCATCATGTCCACCACATGCAACCACGGCTGCTA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--
-----------------S-SSS-S----------------------S--------S-------------SSS--------
---S--------SSS----------------------------------------S---------S--------------
--S----------S-S------------------------------S----SSSSS--------------S---------
--------------S------------------------------S-------------------S-S-----S------
-------S-----------S--S--------SS-----S-S------SS-----S----------S------S-------
--S-S-----S-------------S-----S--S-SSS-S-SSSS-S--SSSSSSSSSSSS---------------S---
----------S---S-------------------------S----------S--------------------------S-
--------------------------------------------------------------------------------
---------S---SS-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------S-----S--------------------S-S-S
S-------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-----S--------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----S----------------------------S------------------------------------
-----------------------------------------------------------------S--------------
--------------S-----------------------------------------------------------------
------------S-------------------------------------------------------------------
----------------------------------------S---------------------------------------
-S------------------------------------------S-----------------------------------
------------------------------S----------------------------------------S----S---
--------------------S---------------S-----------SSSS-------------SS-SSS---------
---------------SSS-S--SSSS-------SS-------------------------------------S---S---
-------------------S----------------S--------SSSS-S-----------S------S--S--S----
-S-----S-S------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_169
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTGACATGTGA
GGCCCACTC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_2170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------AGCCAGGAACATCTACGTGC---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_1846
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GGTTCAAGAAAGTG
CTGGCG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_2953
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TACGGTAC
AGACGCATACGC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
