>input_sequence_55937
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--------------------------------------------------------------------------ATGCAG
ATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACGATCGACAACGTCAAGGCGAA
GATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGCACCC
TCGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGCGTGGTGGAATGCAGATCTTCGTCAAG
ACCCTCACCGGCAAGACCATCACGCTCGAGGTTGAGTCTTCGGACACCATAGACAACGTCAAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGC------------------------
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----------------------------------------------------------------------CTCAGGGGTG
GTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTTGAGGTCGAGTCATCGGACACCATCGACAATGTG
AAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAGCGTCTGATCTTTGCTGGTAAGCAGCTCGAGGATGG
CCGCACTCTGGCGGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGCCTCCGTGGTGGCCAGTAA----
--------------------------------------------------------------------------------
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-
>chr5D_1_TraesCS5D01G087500
CCTTTCCCCGAAATTGCGTGGTGGAGGCCTCGCATCGCTCCCCACCCGTCGTCACCCGTGCCGTAGCCTCACGGGACTCT
TCTCCCTTTAAATCCCCATCCCCTCCCGTCTCCTCCACCACTCATCCAATCCTCCCTGCCAAGCGAGCCCCAGAAAGTTT
CCGATCGAATCGAAGCCAAGGCTTTCTCGT---CCTCCGAGGTACGCGAATCCCAGACCGCGCT----------CCTCGC
TATTATCGTTGATTGA-TTGCTGTTGATCTGCCCCGTAGTCGGTTGTCGCGAAATCCCTCTCGATTATGCCTGGATTATC
GGGTGAATCTGCCGATTAGAGGTGTCTAGTTGATTCCGCTCGTTCCAT-----------------------ATAGATTTG
TTGATCGATTGCTGTTGATTTGGCTCCGTTGTCGTGAAATCTCTCACGATTATGCCTGGATTATC-GGTAGATCTGCCGA
TTTGAGATGCAACTGATGT-------------------------------------------------------------
-----------------------------------------------------------TGAT------TATGTTCATCT
AGGCGTATGTAGTTGATTGATTCCGCTCTGTTCCTGCTGAGTCGTTCAGACTTTGTGGCGCTCATGAGCCTTTT-ATGTC
GCACCTATGC--GATCTGTCAACGGATATACCG--------------GGGCACATCTAGATGTGCTTTAGCAAAACTGTT
TCCTATATTAGTTGTTGGGCCTAGTAGTTGTTTGGAGGATTCGTTCTTGTGCACCGGTTCTGCTCT-AAGAGTCAATTGT
GTTTGCTTACAATAGTACTGTTGATTTAACTAGATATTGTAGCTTGCTGTGTCAAAACTTGAAATTATCTGTACTTGTGC
ATCAG------TTCTTGTCTGAAAATCATA-TATATTAACTGATTTTTTTAGCTTGTTGTCAAACTTGAACATCAATCTG
CTATCTAATT----GTTCCTATTGAGATGTTCACACATAGTTACAA-TTTCATCCCTCTTGGATCGTGGCTTTCTAGTTC
ATATATGCTTTATGTTCTGCAGTTTCATGATTACGAGTGCCTTACTATGGTTTTGGTACACTTTATGTTTGCAGATGCAG
ATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACGATCGACAACGTCAAGGCGAA
GATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGCACCC
TCGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGCGTGGTGGAATGCAGATCTTCGTCAAG
ACCCTCACCGGCAAGACCATCACGCTCGAGGTTGAGTCTTCGGACACCATAGACAACGTCAAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGC------------------------
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----------------------------------------------------------------------CTCAGGGGTG
GTATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTTGAGGTCGAGTCATCGGACACCATCGACAATGTG
AAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAGCGTCTGATCTTTGCTGGTAAGCAGCTCGAGGATGG
CCGCACTCTGGCGGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGCCTCCGTGGTGGCCAGTAAGTGC
CTGGCCATGGAGCTGCTTATGTCTCTGGGCTCACAAGTCAG-TTGTCTTTCTGTGTCCTTCGATGGGATTGTCAGCGTGT
CCTCGTCTGGTCT-G----------------------TTCTTTGTTGCTACCGTGCTGTGGTCTAGCGTTATGTC-----
---TGGTTGTGTCTG-AACTTGCTGCTGTTGTGCAGCAGATTTGGATGAACT------TGAAAGAATAAGTGAGCCCTGA
ACTTGTGCCTGTTG-TTTGCTGTTTGTACTTCTGCAGTTCCTAAACCTTCGCGATTGCATTTGATCTTCTTTCGGTGCTT
TATTTTAAATTATTTTTTCAGCTCAGTATGAGCTGATGTGAGAACATTTTATACTGAACTGAAACCAAGAAAATCTGAAC
GAATGCTCAGCTTCAACGGGTGCTGAGTTCCCCGGTGC------------------------------------------
--------------------ATCTACCCCATTTTTATCTTAGACAAAGTTTGTTAAATCAAAATATGTTCATGGATTTTT
TTAATTGATTTCTTTCTTTTTTGCAAATTTGAAGAAGGTTAGCAAGTTAAAAAATGTTCACAAACTTAATTATTTCCTTT
GTGAACTTTAAAGATATTCATGGATTTAACACCCTTAAAATCCTGGTCTAAGCGACCCCATAGCTTCTGACGCACCAGGC
GGCTCTAGAAGGTTTCATTGGTGATGTTGCACCGGTAGATGATGGCTTTGACAATGTTAGCAGAGTTTCTGTAAGCACTG
TGTATTTGTTC----TTGTTGTAATATGTTGATCGATGTAATTCCCAGCATGGTTTCATTAACTCAAAGCAGAGCTCTTT
TCGAGCCTTCATTCTAAAAAAAGCTGATTCAAAATAATTGTTTATTTTAGATTCTAA--ATTCAGCTTTACTGGCAAAGC
TGTACCTAATCCTTGAAGCTATCT-----------------TAATAGATAACATCATTGTCTCACGGCTAGACTGAAATC
TCAAAGGATATCCAACGTAGACTATACAAATTACTAGGAAATGTTATTAGTACATTGGTTAGTACAAATTCTAAAAATGT
A
>chr5A_1
CCTTTCCCCGAAATTGCGTGGTAGAGACCTCGCATCGCTCCCCACCCGTCGTCACCCGTGCCGTAGCCTCACGGGACTCT
TCCCCCTTTAAATCCCCCTCCCCTCCCGTCTCCTCCTCCACTCATCCAATCCTCCCTGCCAAGCGACCCCAAGAAAGTTT
CCGATCGAATCGAAGCCAAGGCCTTCTCGCCCACCTCCAAGGTACGTGAATTTCAGACCGCGCCCCACCGCGCCCCTCGC
TATTATCGTTGATTATGTTGCTGTTGATCTGCCCCGTAGTCGGTTGTCGCGAAATCCCTCTCGATT-----TGGATTATC
CGGTAGATCTGCCGATTAGAGGTGTTCTAGTTGATCCGCTCGTTCCGTGTTAGCAGTACTAGTTCGAGACGATAGGTTTG
TTGATCGATTGCTGTTGATTTGGCTCCGTTGTCGTGAAATCCCTCACGGTTATGCCTGGATTATCTGGTAGATCTGCCGA
TTTGAGACGCAACTGATGT-------------------------------------------------------------
-----------------------------------------------------------TGATGTTGATTATGTTCATCT
AGGCGTGTGTGGTTGATTGATTCCGCTAGGTTCCTGCTGAGTCGCTCAGACTTTGTGGTGCTCATGAGCCTTTTTATGTT
GCACCTATGCTTGATCTGTGAACGGATATACCTGAGTTGCATACTT-GGGCACACCTAGATATGCTTTAGCAAAACTGGT
TCCTATGTTAGTTGTTGGGCCTAGTAGTTGTTTGGAGGATCCGTTCTTGTGCACCGGTTCTGCTCTTAAGAGTCAATTGT
GTTTGCTTACAGTAGTACTGTTGATTTAACT-GATATTGTATCTTGTTGTGTCAAAACTTGAAGGTATCTGTACTTGTGC
ATCAG------CTCTTGTCTGAAAATCATA-TATATTAACTGATCTTTTTAGCTTGTGGTCAAACTTGAACATCAATCTG
CTATCTAATA----GTTCAAG-------------ACATAGTTACAA-TTTCGTCTCTCTTGGATCATGGCCTTCTGGTTC
ATATATGCTTTATGTTCTGCAGTTTCATGATTACGAGTGCCTTATTATGGTTTTGGTACACTTTATGTTTGCAGATGCAG
ATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACGATCGACAACGTCAAGGCGAA
GATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACCC
TTGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGCGTGGTGGCATGCAGATCTTTGTCAAG
ACCCTCACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTC--------------------
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-------------------------------------------------------CACCTGGTGCTCCGTCTCAGGGGTG
GTATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCAGACACCATCGACAATGTG
AAGGCGAAGATCCAGGACAAGGAGGGTATCCCACCGGACCAGCAGCGCCTCATCTTTGCTGGTAAGCAGCTCGAGGATGG
CCGCACTCTGGCGGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGCCTCCGTGGTGGCCAGTAAGTGC
CTGGCCATGGAGCTGCTTATGTCTCTGGGCTCACGAGTCGG-TTGTCTTTTTGTGTACTCCGTTGTGATTGTCAGCGTGT
CCTCGTCTGGTCTTG----------------------TTCTTTGTTGCTACCGTGTTGTGGTCTAGCGTTATATC-----
---TGGCTGCGTCTG-AACTTTATGCTGTGCTGCAGCAGATTTGGATGAACT------TGAATGAATAAATGAGCCCTGA
ACTTGTGCCTGTTTTTTTGCTGTTTGTACTTCTGCAGTTCCTAAACCTTCGCAATTGCATTTGATCTGCTTTCGATGCTT
TATTTTAAATCATTTTTTCAGCTCAGGATGAGCTGATGTGAGAACATTTTATACTGAACTGAAACCAAAAAAATCTGAAG
GAATGCTCAGCTTCAACGGGTGCTAAAAGGAGACAACCATGTCCGATATCATTTGCAACTAAAGCCAACAAATCGGAGCT
CAGAGCTTGTGAACCGAGGAATCTACCCCATTAGTTTTGTTATTAATAAAGTTCATGG-----------------TTTTT
TTAATTGATTTCAATTTTTTTTGCAAATTTGAAAAAGGTATATT---------ATGCTCACAAACTTAATTATTTCCTTT
GTGAACTTTAAATATGTTCATGGATTTAACACCCAC--------------------------------------------
------------------------------------------------------------CAGTGTTTCTGTAAGCAC--
-GTATTTGTTCTTGTTTGTTGTAAGATGTTGATCGATGTAATT--------------------TCAAAGCAGGGCTCTTT
TTGAGCCTTCGTTTTACAAAAACTGATTCGAAT----TTATTTTTTTTAGATTTCAGAGATTCAGTTTAACTGGTAAAGC
TGAACATAATCCCTGAATCTCAAACAAACGTTAGTATCTTATAATACATAACATCATTGTCTCACGGCTAGATTGAAATC
TCAAAGGATATCCAACGTAGACTATACAAATTACTAGGAAATGTTATTAGTACAATGTTT--------------------
-
>chr5B_1
CCTTTCCCCGAAATTGCGTGGTAGAGACCTCGCATCGCTCCCCACCCGTCGTCACCCGTGCCGTAGCCTCACGGGACTCT
TTTCCCTTTAAATCCCCATCCCCTCCCGTCTCCTCCTCCACTCATCCAATCCTCCCTGCCAAGCGAGCCCCAGAAAGTTT
CCGATCGAATCGAAGCAAAGGCTTTCTCGTCCGCCTCCAAGGTACGCGAATTCCAGACCGCGCT----------CCTCGT
TATTATCGTTGATTGA-TTGCTGTTGATCTGCCCCGTAGTCGGTTGTCGCGAAATCCCTCTCGATTATGCCTGGATTATC
GGGTAGATCTGCCGATTAGAGGTGTCTAGTTGATTCCGCTCGTTCCGTGTTAGCAGTACTGGTTCGAGACGATAGATTTG
TTGATCGATTGCTGTTGATTTGGCTCCGTTGTCGTGAAATTTCTCACGATTATGCCTGGATTATCCGGTAGATCTGCCGA
TTTGAGATGCAACTGATGTTGATTATGTTCATCTATGATAGATTTGTTGATCGATTGCTGTTGATTTGGCTCCGTTGTCG
TGAAATCTCTCACGATTATGCCTGGATTATCGGGTAGATCTGCCGATTTGAGATGCAACTGATGTTGATTATGTTCATCT
AGGCGTGTGTAGTTGATTGATTCCGCTCGGTTCCTGCTGAGTCGTTCAGACTTTGTGGCGCTCATGAGCCTTTT-ATCTC
GCACCTATGCTTGATCTGTTAACAGATATACCTGATTTCCATTCTTAGGGCACATCTAGATGTGCTTTAGCAAAGCTGTT
T-CTATGTTAGTTGTTGGGCCTAGTAGTTGTTTGGAGGATCCGTTCTTGTGCACCGGTTCTGCTCTTA-GAGTCAATTGT
GTTTGCTTACAATAGTACTGTTGATTTAACTAGATACTGTAGCTTGTTGTGTC-AAACTTGAAAGTATCTGTACTTGTGC
ATCAGTTCTAGTTCTTGTCTGAAAATCATACTATATTAACTGATTCTTTTAGCTTGTAGACAAACTTGAACATCAATCTG
CTATCTAATACTCAGTTCCTATTGAGATGTTGTTTACACAGTCACAGTTTCATCTCTATTGGATCGTGACCTTCTTGTTC
ACATATGCTTTATGTTCTGCAGTTTCATGATTACGAGTGCCTTACTATGGTTTCGGTACACTTTATGTTTGCAGATGCAG
ATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACGATTGACAATGTCAAGGCGAA
GATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACCC
TCGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTATGCAGATCTTTGTCAAG
ACCCTCACCGGCAAGACCATCACCTTGGAGGTTGAGTCATCCGACACCATTGACAACGTGAAGGCAAAGATCCAGGACAA
GGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGAAGGAGTCCAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CCTC--------------------
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-------------------------------------------------------CACCTGGTGCTCCGTCTCAGGGGTG
GTATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCATCTGACACCATTGACAATGTG
AAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAGCGCCTCATCTTTGCTGGTAAGCAGCTCGAGGACGG
CCGCACCCTCGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGTCTCCGTGGTGGCCAGTAAGTGC
CTGGCCATGGAGCTGCTTATGTCTGTGGGCTCACAAGTCGG-TTGCCTTTCTGTGTCCTCCGATCGGATTGTCAGTGTGT
CCTCGTCTGGTCTTG----------------------TGCTTTGTTGCTACCGTGCTGTGGTCTAGTGTTATGTACTTAT
GTTTGGTTGTGTCCGTGAACTTTCTGACC---GCAGCAGATTTGGATGAACTGTGAAATGAATGAATAAGTGAGCCCTGA
ACTTGTGCCTCCTTTTGCTGTT----------------------------------------------------------
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>chr7D_887
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---------------------------------------GTTGCAA-TTTCATCTTTGTAGCATGGTGGCCATCTGGTTC
ATTTATTGTTTGACGTACTGCAGATATCCCTGTACGCTAACTTACTCTGGTTTCTGTCTGCTTTGTATTTACAGATGCAG
ATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATCGACAACGTCAAGGCAAA
GATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCC
TTGCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTTCTCAGGCTCCGTGGTGGTATGCAGATATTTGTCAAG
ACCCTCACTGGCAAAACCATCACCCTCGAGGTTGAGTCCTCAGACACCATTGATAATGTGAAGGCCAAGATCCAGGACAA
GGAGGGTATCCCACCGG---------------------------------------------------------------
--------------------------------------------------------------------------------
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-----ACCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAACAT--------
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--------------------------------------CCAGAAGGAGTCCAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTGGTGCTCAGGCTCCGTGGTG
GCATGCAGATATTTGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGTCATCTGACACCATTGACAACGTG
AAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTTGCCGGTAAGCAGCTTGAGGATGG
CCGCACCTTGGCGGACTACAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGTGGTGGCCAGTAAGCTC
CTGGCCATGGAGCTGCTTCTGTCTCTGGGTTCACAAGTCTCGGTGTCTCCGGTA--TCCTCCAATGGA------------
----GTCTGGTCT-GTGTCTGTCGTTGCCTGAACTGTCTTTGTTTCTGTACCATACTGTGATGCAGTGTTATCGT-----
------TTGTATCTTCAAACTTCTGCTGGTGTGGAGCAGCTTTGGTGAACT----------ATGAATAAGTGAGCGCTTA
ATTTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>chr7D_992
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGTTTACAGATGCAG
ATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGGCTAA
GATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCC
TCGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCAGGCTCCGTGGTGGCATGCAGATTTTTGTGAAG
ACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGTCCTCGGACACCATTGACAACGTGAAGGCGAAGATCCAGGACAA
GGAGGGCATCCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGACTATA
ACATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCAGGCTCAGGGGTGGGATGCAGATTTTTGTGAAGACCCTCACCGGC
AAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCC
TCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTACAACAT--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------CCAGAAGGAGTCCAC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CCTC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CACCTGGTGCTCAGGCTCCGTGGTG
GCATGCAGATTTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGTCCTCGGACACCATTGACAACGTG
AAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGATGG
CCGCACCCTGGCGGACTATAACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGTGGTGGCCAGTAAGTGC
CTGGCAATGGAGCGGCTTC--TCTGCGGGTTCACAGGTCTT-GTGTCTTCGATATGTCCTCCAATGGTGCA---------
------------T-GTGTCTGTCGTCCTGGTC---GTTTCTATGTTTCTATCGTAGTGTGCTGCATCGTTATGTT-----
---CGGTTGTATTTGAGAACTGCTGCTGTTGTGAA-CAGCTTTG--------GTGAACTTGATAAATAAGTGAGCCCTAA
TTGTGTCTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-
>SNPs
----------------------S---S-----------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------S------------S----------------------------
--------------------------------------------------------------------------------
----SS----------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------------S---------------------------------------------------
-------------------S------------S-----------------------------------------------
------S---------------------------------S---------------------------------------
----------------------------------------------S-----------------S---------------
---------------------------------------------------------S----------------------
---------S---------------------SSS--------------------S---------------S----S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-----------S------
-----------------------S--------------S-----------S--------S--------------------
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-----------------------------------------------------SSS------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-------------S--------------------------------------S--------------S------S-----
----------S---------------S-----------------------------------------S----------S
------------------------S-SSSSSSSSSSS-------------------------------------------
--------------------------------SS-S-SS-SSSS--SSSSSS-S-SSSSSSSSSSSSSSSSSSSS-----
------------SS-S-----------------S-----SSSSSSSSSSSSSS---S-----------------------
------------S--S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--------------SS
S-----------------------S------------------SSSSSSSSSSSSSSSSSSSS---------S-------
-S--------S--S--S-----SSSSS-SS--SSSSS--S---S---------SS-S--------S--S-----S-----
--S--S------S----S--SSSS----------------------S-------------------------S-------
------------------------------------------------------S--S--SSSSSSSSSSSSSSSSSSSS
S
>forward_367
--------------------------------------------------------------------------------
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---------------------------AGTTGATTCCGCTCGTTCCA---------------------------------
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-
>reverse_1464
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GCTCGAGGTTGAGTCTTCGG-------------------------------------
--------------------------------------------------------------------------------
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-
>forward_1111
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------TCCCTCTTGGATCGTGGCT---------
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-
>reverse_3680
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
GAATGCTCAGCTTCAACGG-------------------------------------------------------------
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--------------------------------------------------------------------------------
-
