>input_sequence_55909
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--------------------------------------------------------ATGAAGCGGAAGACGCGGAACAAG
ATCGTGGTGACGGTGCTGCTGCTGGGGGCGGCGGCGGTGCTGATCGGCGGCACGCTGGCGCTGATCCTGACGGCGGGCAC
CTGGAAGGTGAAGCTCAAGGAGTCGCAGGAGAAGGTGTGCAACAAGGGGTGGGAGTGCTCCGGCACCAAGTACTGCTGCA
ACCAGACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCGCCAAGCGCAACTTCCCCGTCGCCAAGGCC
GTCGGCTTCTGGGACTACCAGGCCTTCATCACCGCCGCCTCGCTCTTCGAGAACCAGGGCTTCTGCACCACCGGCGGCAT
CGACATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCACGTCGGCGCAAAGACCTCATGTATGTATTGCTTGGTTCTTT
TTCTTCCTCTTCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGGTGG-GGTGGCTCGATTCCGATTCC
GATTGATTGCTGCC-TTGCTCTGCTTCCTGTTGCTTCCCCTGCTTCGATTAGATCCAGGAGACCGACTGATTGAGTCTTC
TTGCAGGTGGATACGGCGTGGCGACCGGCGGTCCGACGGCGTGGGGGCTGTGCTACAACCACGAGATGAGCCCCGACCAG
GGCTACTGCGACGACTCCTACACGCAGTGGCCCTGCGTCAAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCGGTCTA
CTGGTAAGCTCAG-CCATTCAGTTCATCAATTGCAGTCACTCATGACACAGTTCTTGCGACG----CCTT--GATTGATC
CATCGGAGC-------------------------------------------GGGCAGGAACTTCAACTACGGCGCGGCC
GGGGACGGGCTGAAGGTGGACCTGCTGCACCACCCGGAGCTGCTGGAGCAGAACGCGACGCTGGCGTTCGCGGCGGCCAT
GTGGCGGTGGATGACGCCCATCAAGAAGAAGCAGCCGTCGGCGCACGAGGCTTTCACGGGGGTGTGGAAGCCCAGCAAGA
ACGACACGCTGAGCAAGCGCCTCCCGGGCTTCGGCGCCACCATGAACCTCCTCTACGGCGAGTCCATCTGCGGCCGGGGC
TTCATCGACGAGATGAACGTCATCATCTCCCACTACCAGTACTACCTCGACCTCATGGGCTTCGGCCGGGAGCGCTCCGG
CCTCAACCTCGACTGCGCCGAGCAGGCCCCCTTCAACCCCGCCCCCAAGAAGGACGACGAGCAGCAGCCCACCGGCGGCC
AGAAGCCCTCAGGCTAG---------------------------------------------------------------
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--------
>chr5B_1_TraesCS5B01G272600
AAGATACATATGAAAATTAGTGGTGCTTGTATTACTCATATCTGACTATCAAAACTATGTAAGCCATTTTATGTCAAACT
TTGAGAGAACACATATATAGACTGCAGTTTGGTTAGGATCCGTCCGAGATTTATGCCGCCATGGTTGTAACCTCCGGGTG
TTGAGCAAAAATGCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGGTGTAGC
ATTGGCGGGTGTTGAGTAATAGTACAAATGTTGTTTCTTGTAAATAAAAGTCAAGACAAATGTGGAGAATTTAGGGGGTT
TTCATGGAAGTGCCCTAGGTGCAAGTGTGTAAACTAAACCGTCGGTGGAACTTCCTAAATTTCCACTTGTTTTTTTTTTT
TGAGGTAGTATGAGAAACACGGAATTTCAGCTTAAAAAAAGAAAGGAAGACGGAATTTACCGGAAAAATCATTAACGGTA
ACGTCTTACCTACCGGACCAGCTGTCTTGCAGCTCTTCCCGTCTCCTT-CCTCCCTCGTCTTGACGGACAGCCCTCCCGC
CACCGACACCACTCCTCTCTGCTCTCTCCCCCGGTCGCACGCGCGGTTGCCACTTCGCTTTCATCCCCACTCCCATTTTT
ATCTCCTCACCAGATCCCCGCCACCAGCTACCGCATTCCCCAAAGATCCAGATCACACCAAACGGGGGCAGCCCAGATCG
AGCACCCGAGCTCCCGAGAAGAAGCGAGATCCAGATCGAGCTGAGCTGCCC----------GGGCCGCCG-----GAGCT
GAGCTGAGCTGCTCTGACCGCCGGAGGCGAAGAAGAAGAAGAAGAAGAGCAAGAAGATGAAGCGGAAGACGCGGAACAAG
ATCGTGGTGACGGTGCTGCTGCTGGGGGCGGCGGCGGTGCTGATCGGCGGCACGCTGGCGCTGATCCTGACGGCGGGCAC
CTGGAAGGTGAAGCTCAAGGAGTCGCAGGAGAAGGTGTGCAACAAGGGGTGGGAGTGCTCCGGCACCAAGTACTGCTGCA
ACCAGACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCGCCAAGCGCAACTTCCCCGTCGCCAAGGCC
GTCGGCTTCTGGGACTACCAGGCCTTCATCACCGCCGCCTCGCTCTTCGAGAACCAGGGCTTCTGCACCACCGGCGGCAT
CGACATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCACGTCGGCGCAAAGACCTCATGTATGTATTGCTTGGTTCTTT
TTCTTCCTCTTCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCGGTGG-GGTGGCTCGATTCCGATTCC
GATTGATTGCTGCC-TTGCTCTGCTTCCTGTTGCTTCCCCTGCTTCGATTAGATCCAGGAGACCGACTGATTGAGTCTTC
TTGCAGGTGGATACGGCGTGGCGACCGGCGGTCCGACGGCGTGGGGGCTGTGCTACAACCACGAGATGAGCCCCGACCAG
GGCTACTGCGACGACTCCTACACGCAGTGGCCCTGCGTCAAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCGGTCTA
CTGGTAAGCTCAG-CCATTCAGTTCATCAATTGCAGTCACTCATGACACAGTTCTTGCGACG----CCTT--GATTGATC
CATCGGAGC-------------------------------------------GGGCAGGAACTTCAACTACGGCGCGGCC
GGGGACGGGCTGAAGGTGGACCTGCTGCACCACCCGGAGCTGCTGGAGCAGAACGCGACGCTGGCGTTCGCGGCGGCCAT
GTGGCGGTGGATGACGCCCATCAAGAAGAAGCAGCCGTCGGCGCACGAGGCTTTCACGGGGGTGTGGAAGCCCAGCAAGA
ACGACACGCTGAGCAAGCGCCTCCCGGGCTTCGGCGCCACCATGAACCTCCTCTACGGCGAGTCCATCTGCGGCCGGGGC
TTCATCGACGAGATGAACGTCATCATCTCCCACTACCAGTACTACCTCGACCTCATGGGCTTCGGCCGGGAGCGCTCCGG
CCTCAACCTCGACTGCGCCGAGCAGGCCCCCTTCAACCCCGCCCCCAAGAAGGACGACGAGCAGCAGCCCACCGGCGGCC
AGAAGCCCTCAGGCTAGCACCATGTTGC---------------TGTATAAATATTCTTACCACGCCATTGC-------CT
GCTCCCCAGAGCTACGCCGAGCTGCCGATT----CTTCAGCGTGTGAGCTGCTTTGGTGCCATTTTGGGTAGCTGATCCG
AGAGCTGTGTATGTGAATTGGGAAAACTTTAGCCTGGGTGTGTACCACGGTGTCCATTTTCATTTGTTTTTGTTTCATTT
TTTGTGTCACACATATGTCTAAAGAAGAGAATTCGAACTGAACATAGGCAACATATCCTACCATGACTCTGCTCAACTTT
CTGTATATGTTCCACCTGAGTAAGGTATTGCTTGATTTATCCATGTATAAATACCAGTTTGGCCTGACTAAGGTGTTGCC
TGATTGAGCCATTTGTGAGGGGCCATCTTTG-GCAAACGTGATCCAAGGAAGGAAAGGGCCAATCTATGAACAGCCGTTG
TTTTGAACCTAGGAAAACGCTGTGTTTTGCTGCAGAATCGCCGTGTTTTACATGCCTAAAAAAAGCTAGAGAAGCTTAAC
GGGATCTTGCTAG-AATGACAGGACACTAATGATTTTCATGTACAGAAATGCGAAGCTCTAGGGTTTAGAATCATG----
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTAGT
GTTGTTCATGCATAGATATGGAAATTTTGCTTCCATATGTGTAAAGGCAAGGATCATGCTGGCAAATATAGGA---CATG
CTAGATGAGCATCACGGGCGCAGAGAATAACGCACC-GCCACTGCTAAAACTGCCATGTCTCGATAGATAATAGAAGAGT
CGACTCCGACATACAGCACAACACAACAGTACCCTACCGACATTTCTGTATCTTACAAAGGAGAAAATTAAAGGCATCTA
ATCTTGCACGACAAGGTCTCCTACATAAGCACGTAGGGGAACATACATGCTCCGAAAGGGTTCGACAGGGCTTCCACGAT
ACTACAACATTCAGTCAACTTGCTGTCCCAAATCGTCGAATTTTGGGTCGACCTCGAAGGTTCGTGCCTTGGTACACATA
TAAGGCCA
>chr5A_409
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------GTGTTGAGTAATAGTACAAATGTCGTTTCTCGTAAA--AAATTTAAGACAAATGGGGATGTATTTGGGGCTT
TTCATGGAAATGCCCTAGGTGCAAGTGTGTAAA-----CCGTCGGTGGAACTTGCTGAATTTCCACTTGTTTGTTATTA-
-----TAGTATAAGAAACACGGAGTTTCAGCTTAAAAAAAAAA-GGAAGACGGAATTTACCGGGAAAATCATTAACGGTA
ACGTGTTACCTACCGAACCAGCTGTCTTGCAGCTCGTCCCGTC---TT-CCTCCCTCGTCTTGACAGCCGACCCTCCCGC
CACCGACACCACTCCTCTCT------TCCCCCGGTCGCACGCGCGGTTGCCACTTCGCTTTCATCCCCACTCCCATTTTT
ATCTCCTCACCAGATCCCCGCCACCAGCTACCGCATTCCCCAAAGATCCAGATCACACCAGACGGGGGCAGCCCAGATCG
ATCTCCCGAGCTCCCGAGAAGAAGCGAGATCCAGATCGAGCTGAGCTGAGCTGAGCTGCTCGGACCGCCGGAGCTGAGCT
GAGCTGAGCTGCTCTGACCGCCGGAGGGGGGAGAGC-----AAGAAGAGCAAGAAGATGAAGCGGAAGACGCGGAACAAG
ATCGTGGTGACGGTGCTGCTGCTGGGGGCGGCGGCGGTGCTGATCGGCGGCACGCTGGCGCTGATCCTGACGGCGGGGAC
GTGGAAGGTGAAGCTCAAGGAGTCGCAGGAGAAGGTGTGCAACAAGGGGTGGGAGTGCTCCGGCACCAAGTACTGCTGCA
ACCAGACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCGCAAAGCGCAACTTCCCCGTCGCCAAGGCC
GTCGGCTTCTGGGACTACCAGGCCTTCATCACCGCCGCCTCGCTCTTCGAGAACCAGGGCTTCTGCACCACCGGCGGCAT
CGACATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCACGTCGGCGCAAAGACCTCATGTATGTAGTGCTTGTTCTTCT
T-------------------CTTCTTCCTCATCTTCTTCTTCCTCCTCCTCTCCGGTGGCGGTGGCTCGATTCCGACG--
----GATTGCTGCTTTTGCTCTGCTTCCTGTTGCTTCCCCTGCTTCGATTAGATCCAGGAGGCCGACTGATTGGGTCTTC
TTGCAGGTGGATACGGCGTGGCCACCGGCGGTCCGACGGCGTGGGGGCTGTGCTACAACCACGAGATGAGCCCCGACCAG
GGCTACTGCGACGACTCCTACACGCAGTGGCCCTGCGTCAAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCGGTCTA
CTGGTAAGCTCAAACCATTCAGTTCATCAATCGCAGCCATTCATG--GCAGTTCTTGCGAACCATACCTT--AATTGATC
CATCCGAGT-------------------------------------------GGACAGGAACTTCAACTACGGCGCGGCG
GGGGACGGGCTGAAGGTGGACCTGCTGCACCACCCGGAGCTGCTGGAGCAGAACGCGACGCTGGCGTTCGCGGCGGCCAT
GTGGCGGTGGATGACGCCCATCAAGAAGAAGCAGCCGTCGGCGCACGAGGCCTTCACGGGGGTGTGGAAGCCCACCAAGA
ACGACACGCTCAGCAAGCGCCTCCCGGGCTTCGGCGCCACCATGAACCTCCTCTACGGCGAGTCCATCTGCGGCCGGGGC
TTCATCGACGAGATGAACGTCATCATCTCCCACTACCAGTACTACCTCGACCTCATGGGCTTCGGCCGGGAGCGCTCCGG
CCTCAACCTCGACTGCGCCGAGCAGGCCCCCTTCAACCCCGCCCCCAAGAAGGACGACGAGCAGCAGCCCACCGGCGGCC
AGAAGCCGTCGGGCTAGCACGCACCATGTT-----TGTATGCATGTTCAGATATTCTTGCCACGCCATTGC-------CT
GCTCCCC-GAGCTATGCTGAGCTGCTGATACATACTTCAGTGTGTGA---GCTTTGGTGCCATTTTGGGTAGG-------
---GCTCTGTATGTGAATTGGGGAAACTGTGGCCTGGGTGTGTACCACGGTGTCCATTTTCAGTTGTTTTGTTTCATTTT
TTTGTGTCACACATATGTCTAAAGAGGAGAATTCGAACTGAACATAGGCGACATATCCTACCATGACTCTGCTCAACTTT
CTGTATATGTTCCACCTGAGTAAGGTATTGCTTGATTTATCCATGTATAAATGCCAGTCTGACCTGACCAAGGTGTTGCT
TGATTGAGCCATTTGTGAGGGGCCATCTTTTAGCAAACGTGATCCAAGGAAGGAAAGGGCCAATCTATTAACAGCCGTTG
TTTTGAACCTAGGAAAACGCTGTGTTTTGCGGCAGAATCATTGTGTTTTACATGCCTG-AAAAAGCTAGAGAAGCTTGAC
GAAATTTTGCTATAAAT-----GATACTGGTGTTGTTCATGTATAGATAT-CGAAGTTCTAGGGTTTAGAATCATACTCC
CTTCATTTCTAAATACAAGACCTTTTAGAGATTTTACTATGGACTACAAACGGATGTATATAGACGTATTTTAGAGTATA
GATTCACTCATTTTGCTCCGAATGCAGTCTGTATTGGAATCTATAAGAAGGCTCAGATTTAGGAATGGGGGAGTACTAGT
GTTGTTCATGCATAGATGTGGAAATTTCGTTTCCT--TGTGGAAAGGCATGGATCATGCAGGCAAATCCTATATGGCATG
CTAGATGAGCATGACGAGCTCGGAGAATAACGCACC-GCCACTGCTACAACTGTCATGTCTCGATAGATAATAGATGAGT
CGACTCCGACATACAGCACAACACAATAGTCCCCTACCGACATTTCTGTATCTTACAAAGGAGAAAATAAAACGCATCTA
ATCTTGCATGACAAGGTCTCCTACATAAGCATAGC--GGAACATACATGCTCCGAAAGGGTTCGACAGGGCTTCTCCGAT
ACTACAACATTCAGTCAACTTGCTGTCCCAAATCGTCGAATTTTGGGTCGACCTCGAAGGTTCGTGCCTTGGTACACATA
TAAGGCCA
>chr5D_565
--------------------------------------------------------------------------------
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----GTAGTACAAGAAACACGGAATTTCGGCTTAAAAAAAGAAAGGAAGACGGAATTTACCGGGAAAATCATTAACGGTA
ACGTCTTACCTACCGGACCAGCTGTCTTGCAGCTCTTGCCGTCGTCCTCCCTCCCTCGTCTTGACGGACGGCCCTCCCGC
CACCGACACCACTCCTCTCT------CCCCCGGTCGGCGCGCGCGGTTGCCACTTCGCTTTCATCCCCACTCCCATTTTT
ATCTCCTCACCAGATCCCCGCCACCAGCTACCGCATTCCCCAAAGATCCAGATCGCACCAAACGGAGGCAGTCCAGATCG
AGCTCCCGAGCTCCCGGGAAGAAGCGAGATCCAGATCGAGCTGAGCTGCT-----CTGCTTGGGCCGCCG-----GAGCT
GAGCTGAGCTGCTCTGACCGCCGGAGCG---------------GAAGAGCAAGAAGATGAAGCGGAAGACGCGGAACAAG
ATCGTGGTGACGGTGCTGCTGCTGGGGGCGGCGGCGGTGCTGATCGGCGGCACGCTGGCGCTGATCCTGACGGCGGGCAC
CTGGAAGGTGAAGCTCAAGGAGTCGCAGGAGAAGGTGTGCAACAAGGGGTGGGAGTGCTCCGGCACCAAGTACTGCTGCA
ACCAGACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCGCCAAGCGCAACTTCCCCGTCGCCAAGGCC
GTCGGCTTCTGGGACTACCAGGCCTTCATCACCGCCGCCTCGCTCTTCGAGAACCAGGGCTTCTGCACCACCGGCGGCAT
CGACATGCAGATGATGGAGCTCTGCGCCTTCCTCGGACACGTCGGCGCCAAGACCTCATGTATGTAT-GCTTGTTCTTTT
---------------------------------TTCTTCTTCTTCTACTTCTCCGGTGG-GGAGGCTCGATTCCGATTCC
GATGGACTGCCGGC-TTGCTCTGCTTCCTGTTGCCTCCCCTGCTTCGATTAGATCCAGGAGACCGACTGATTGA-TCTTC
TTGCAGGTGGATACGGCGTGGCCACCGGCGGTCCGACGGCGTGGGGGCTGTGCTACAACCACGAGATGAGCCCCGACCAG
GGCTACTGCGACGACTCCTACACGCAGTGGCCCTGCGTCAAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTA
CTGGTAATTAATAGAGCTCATCACTAG-----------ATTCATC--ACAGTTCTTGCGATG----CCAATCAATTGATC
CATTAAAGTGGAAGTAGAAAACCAGTTCGCTGATGTGTGATGGGGTCTCCATGGCCAGGAACTTCAACTACGGCGCGGCG
GGGGACGGGCTGAAGGTGGACCTGCTGCACCACCCGGAGCTGCTGGAGCAGAACGCGACGCTGGCGTTCGCGGCGGCCAT
GTGGCGGTGGATGACGCCCATCAAGAAGAAGCAGCCGTCGGCGCACGAGGCCTTCACGGGGGTGTGGAAGCCCACCAAGA
ACGACACGCTCAGCAAGCGCCTCCCGGGCTTCGGCGCCACCATGAACCTCCTCTACGGCGAGTCCATCTGCGGCAGGGGC
TTCATCGACGAGATGAACGTCATCATCTCCCACTACCAGTACTACCTCGACCTCATGGGCTTCGGCCGGGAGCGGTCCGG
CCTCAACCTCGACTGCGCCGAGCAGGCCCCCTTCAACCCCGCCCCCAAGAAGGACGACGAGCAGCAGCCCACCGGAGGCC
AGAAGCCGTCGGGCTAGCACGCACCATGTTGTTGTTGTATACATGTTCAGATATTCTTGCCACGCACCATTGCCTGCTCT
GCTCCCC-GAGCTATGCTGAGTTGCTGATACATACTTCAGTGTGTGA---GCTTTGGTGCCATTTTGGGTAGG-------
---GCTCTGTATGTGAATTGGGGAAGCTGTAGCCTGTGTGTGTACCACGGTGTCCATTTTCAGTTGTTTTGTTTCATTTT
TTTGTGTCACACA-ATGTCTAAAGAGGAGAATTCGAACTGAACATAGGCAACATATCCTGCCATGACTCTGCTCAACTTT
CTGTATATGTTCCACCTGAGTAAGGTATTGCTTGATTTATCCATGTATAAATACCAGTCTGACCTGACTAAGGTGTTGCT
TGATTGAGCCATTTGTGAGGGGACATC-TTTAGCAAACGTGATCCAAGGAAGGAAAGAGTCGATCTATGAACAGCCGTTG
TTTTGAACCTAGGAAAACGCTATGTTTTGCTGCAGAATCATTGTGTTTTACATGCCTA-AAAAAGCTAGAGAAGCTTAAC
GAAATTTTGCTAG-AAT-----AATACTAGTGTTGTTTATGTATGGAAAA-CGAAGCTCTGTTCGAATCATA--------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TAGTAGC
TTTGCTCATGCATAGATATGGAGATTTTGTTTAAT--TGTTGAACGGCATGGATCATACTGGCAAATATAT---------
-TAGTAGAGCATCACGAGCGCAGAGAATAACGCAGGTGCCACTGCTACAACTGGCATGTCTCGATAGATAATAGAAGAGT
CGACTCCGACATACAGCACAACACAACAGTTCCCTACCGACATCTCTGTATCTTACAAAGCAGAAAATAAAAGGCATCTA
ATCTTGCACGACAAGGTCTCCTACATAAGCACGTAGGGGAACATACATGCTCCGAAAGGGTTCGACAGGGCTTCCCCGAT
ACTACAACATTCAGTCAACTTACTGTCCCAAATCGTCGAATTTTGG-TCGACCTCGAAGGTTCGTGCCTCGGTACACATA
TAAGGCCA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----------------------S------S-----SS---S-S----------S---SSSS--S----S--
---------S-----------------------SSSSS---------------S--S---------------S--S--SS
SSSS-------S---------------------------------------------------S----------------
-------------------------------------------SS------------------------S----------
--------------------SSSSSS------------------------------------------------------
--------------------------------------------------------------------------------
---S---------------------------------------------S------------------------------
---------------------------S-SSSS--SSSSSS---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------S-SS---
-SSSSSSSSSSSSSSSSSSS-------S--S-------------------------------------------------
---S----------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
------------S------------------S----S--S-----SS-------------S-----------S-------
----S---S---------------------------------------------S------------------------S
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------S-----
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S--S---------SSSSSSSS------------------SS-S--------S---------------------
-------S------S--S-------S---S----------S------SSS----------------------SSSSSSSS
SSS---S---------------S-----S---------------------------------S-------SS--SSS---
-------------------------S------------------------------------------------------
----------------------------------------------------------S--S-----------------S
------------------------------S-------------------------------------------------
---------------------------------------SSS----------------S---------------------
-SS--S-----------SSSSS--S----S--S-S--------S------S------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S----SSS----S-------S--------------------SS--------
----------------S------------------------------S-----S--------------------------
------------------------------S-------------------------------------S-----------
---------------------------------------------------------------------------S----
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--------
>forward_138
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--------------------------------------TCCGTCCGAGATTTATGCCG----------------------
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>reverse_1833
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------------------------------------------------------------------------GATTGATC
CATCGGAGCGGG--------------------------------------------------------------------
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>forward_162
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--------------------------------------------------------------GGTTGTAACCTCCGGGTG
TT------------------------------------------------------------------------------
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>reverse_1895
--------------------------------------------------------------------------------
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------------------------------------------------------GCAGGAACTTCAACTACGGC------
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>forward_745
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-----ACACCACTCCTCTCTGCTCT-------------------------------------------------------
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>reverse_2450
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-------------------------------------------------TGCTTTGGTGCCATTTTGGG-----------
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--------
